TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440503.2.1
(542 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA919324.1|CA919324 EST637042 MTUS Medicago truncatula c... 79 2e-028
gb|BI310277.1|BI310277 EST5312027 GESD Medicago truncatula ... 79 2e-028
gb|BI310257.1|BI310257 EST5312007 GESD Medicago truncatula ... 79 3e-028
gb|BQ164791.1|BQ164791 EST610660 KVKC Medicago truncatula c... 79 3e-028
gb|BQ156827.1|BQ156827 NF097G01IR1F1008 Irradiated Medicago... 75 3e-026
gb|AC126778.9| Medicago truncatula clone mth2-32j21, comple... 82 3e-026
gb|BE941986.1|BE941986 EST421502 MGHG Medicago truncatula c... 82 4e-026
gb|BE941436.1|BE941436 EST421015 MGHG Medicago truncatula c... 82 4e-026
gb|CX529500.1|CX529500 s13dNF94H08MJ064_245051 Methyl Jasmo... 82 4e-026
gb|CX530113.1|CX530113 s13dNF44D03MJ027_246262 Methyl Jasmo... 82 5e-026
gb|BE941720.1|BE941720 EST421299 MGHG Medicago truncatula c... 82 6e-025
gb|BF648516.1|BF648516 NF048E02EC1F1018 Elicited cell cultu... 82 2e-023
gb|BG645994.1|BG645994 EST507613 KV3 Medicago truncatula cD... 71 3e-023
gb|AW559321.1|AW559321 EST306364 DSIR Medicago truncatula c... 79 2e-022
gb|CG955622.1|CG955622 MBENR49TR mth2 Medicago truncatula g... 72 4e-022
gb|AW775281.1|AW775281 EST334346 DSIL Medicago truncatula c... 79 7e-022
gb|BQ146961.1|BQ146961 NF030C06FL1F1049 Developing flower M... 82 7e-021
>gb|CA919324.1|CA919324 EST637042 MTUS Medicago truncatula cDNA clone MTUS-12A6, mRNA
sequence
Length = 649
Score = 79.0 bits (166), Expect(2) = 2e-028
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRF 113
RADP++GYPGRTYRFY GP V+ FGYGLSYS YS+ F
Sbjct: 563 RADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNF 453
Score = 68.9 bits (144), Expect(2) = 2e-028
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +3 / -3
Query: 327 SGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFE 506
+G P QL+GF+S+ + V FEVS C+H SRA E G KVI++G + +VGE E+
Sbjct: 239 NGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGYLFLVGELEYS 60
Query: 507 MS 512
++
Sbjct: 59 IN 54
>gb|BI310277.1|BI310277 EST5312027 GESD Medicago truncatula cDNA clone pGESD7J11 5' end,
mRNA sequence
Length = 655
Score = 79.0 bits (166), Expect(2) = 2e-028
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3 / +3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRF 113
RADP++GYPGRTYRFY GP V+ FGYGLSYS YS+ F
Sbjct: 93 RADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNF 203
Score = 68.9 bits (144), Expect(2) = 2e-028
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +3 / +3
Query: 327 SGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFE 506
+G P QL+GF+S+ + V FEVS C+H SRA E G KVI++G + +VGE E+
Sbjct: 417 NGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGYLFLVGELEYS 596
Query: 507 MS 512
++
Sbjct: 597 IN 602
>gb|BI310257.1|BI310257 EST5312007 GESD Medicago truncatula cDNA clone pGESD7F19 5' end,
mRNA sequence
Length = 768
Score = 79.0 bits (166), Expect(2) = 3e-028
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRF 113
RADP++GYPGRTYRFY GP V+ FGYGLSYS YS+ F
Sbjct: 179 RADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNF 289
Score = 68.9 bits (144), Expect(2) = 3e-028
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +3 / +2
Query: 327 SGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFE 506
+G P QL+GF+S+ + V FEVS C+H SRA E G KVI++G + +VGE E+
Sbjct: 503 NGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGYLFLVGELEYS 682
Query: 507 MS 512
++
Sbjct: 683 IN 688
>gb|BQ164791.1|BQ164791 EST610660 KVKC Medicago truncatula cDNA clone pKVKC-1E2, mRNA
sequence
Length = 771
Score = 79.0 bits (166), Expect(2) = 3e-028
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRF 113
RADP++GYPGRTYRFY GP V+ FGYGLSYS YS+ F
Sbjct: 580 RADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNF 470
Score = 68.9 bits (144), Expect(2) = 3e-028
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +3 / -1
Query: 327 SGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFE 506
+G P QL+GF+S+ + V FEVS C+H SRA E G KVI++G + +VGE E+
Sbjct: 255 NGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGYLFLVGELEYS 76
Query: 507 MS 512
++
Sbjct: 75 IN 70
>gb|BQ156827.1|BQ156827 NF097G01IR1F1008 Irradiated Medicago truncatula cDNA clone
NF097G01IR 5', mRNA sequence
Length = 672
Score = 74.8 bits (157), Expect(3) = 3e-026
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = +3 / -1
Query: 327 SGRPASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFE 506
+G P QL+GF+S+ + V FEVS C+H SRA E G KVI++G H ++VGE+E+
Sbjct: 387 NGNPVKQLVGFESVTVEGGGKGEVGFEVSVCEHLSRANESGVKVIEEGGHLLVVGEEEYS 208
Query: 507 MS 512
++
Sbjct: 207 IN 202
Score = 42.8 bits (87), Expect(3) = 3e-026
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3 / -1
Query: 42 RFYRGPTVFNFGYGLSYSKYSHRF 113
R Y GP V+ FGYG SYS YS+ F
Sbjct: 672 RXYTGPKVYEFGYGXSYSNYSYNF 601
Score = 39.6 bits (80), Expect(3) = 3e-026
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3 / -1
Query: 195 VEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDGS 329
V +G ETC + + + N G M GKH VL+F++ +G+
Sbjct: 513 VSELGEETCKTMSISVTLGITNTGSMAGKHPVLLFVKPKKGRNGN 379
>gb|AC126778.9| Medicago truncatula clone mth2-32j21, complete sequence
Length = 110448
Score = 82.2 bits (173), Expect(3) = 3e-026
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / -1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RA+PATGYPGRTYRFY+GP VF FG+GLSYS+++H A P S
Sbjct: 33486 RANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVS 33352
Score = 39.1 bits (79), Expect(3) = 3e-026
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / -1
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ CD L+ V V+N G MDG H++LV+ + PN
Sbjct: 33291 VSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPN 33181
Score = 35.4 bits (71), Expect(3) = 3e-026
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3 / -1
Query: 345 QLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGE 494
QL+ F ++ A V+ V C H S E G + I G H + +G+
Sbjct: 33171 QLVNFHKTYVPAGSKTRVKVGVHVCNHLSAVDEFGVRRIPMGEHELQIGD 33022
>gb|BE941986.1|BE941986 EST421502 MGHG Medicago truncatula cDNA clone pMGHG-6N6, mRNA
sequence
Length = 669
Score = 82.2 bits (173), Expect(3) = 4e-026
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / +3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RA+PATGYPGRTYRFY+GP VF FG+GLSYS+++H A P S
Sbjct: 117 RANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVS 251
Score = 39.1 bits (79), Expect(3) = 4e-026
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +3
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ CD L+ V V+N G MDG H++LV+ + PN
Sbjct: 312 VSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPN 422
Score = 35.4 bits (71), Expect(3) = 4e-026
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3 / +3
Query: 345 QLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGE 494
QL+ F ++ A V+ V C H S E G + I G H + +G+
Sbjct: 432 QLVNFHKTYVPAGSKTRVKVGVHVCNHLSAVDEFGVRRIPMGEHELQIGD 581
>gb|BE941436.1|BE941436 EST421015 MGHG Medicago truncatula cDNA clone pMGHG-4C7, mRNA
sequence
Length = 650
Score = 82.2 bits (173), Expect(3) = 4e-026
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RA+PATGYPGRTYRFY+GP VF FG+GLSYS+++H A P S
Sbjct: 43 RANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVS 177
Score = 39.1 bits (79), Expect(3) = 4e-026
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +1
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ CD L+ V V+N G MDG H++LV+ + PN
Sbjct: 238 VSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPN 348
Score = 35.4 bits (71), Expect(3) = 4e-026
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3 / +1
Query: 345 QLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGE 494
QL+ F ++ A V+ V C H S E G + I G H + +G+
Sbjct: 358 QLVNFHKTYVPAGSKTRVKVGVHVCNHLSAVDEFGVRRIPMGEHELQIGD 507
>gb|CX529500.1|CX529500 s13dNF94H08MJ064_245051 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 648
Score = 82.2 bits (173), Expect(3) = 4e-026
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RA+PATGYPGRTYRFY+GP VF FG+GLSYS+++H A P S
Sbjct: 62 RANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVS 196
Score = 39.1 bits (79), Expect(3) = 4e-026
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +2
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ CD L+ V V+N G MDG H++LV+ + PN
Sbjct: 257 VSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPN 367
Score = 35.4 bits (71), Expect(3) = 4e-026
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3 / +2
Query: 345 QLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGE 494
QL+ F ++ A V+ V C H S E G + I G H + +G+
Sbjct: 377 QLVNFHKTYVPAGSKTRVKVGVHVCNHLSAVDEFGVRRIPMGEHELQIGD 526
>gb|CX530113.1|CX530113 s13dNF44D03MJ027_246262 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 639
Score = 82.2 bits (173), Expect(3) = 5e-026
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RA+PATGYPGRTYRFY+GP VF FG+GLSYS+++H A P S
Sbjct: 122 RANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVS 256
Score = 39.1 bits (79), Expect(3) = 5e-026
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +2
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ CD L+ V V+N G MDG H++LV+ + PN
Sbjct: 317 VSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPN 427
Score = 35.0 bits (70), Expect(3) = 5e-026
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +3 / +2
Query: 345 QLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGE 494
QL+ F ++ A V+ V C H S E G + I G H + +G+
Sbjct: 437 QLVNFHKTYVPAGSKTRVKVGVHVCNHLSAVDEFGVRRIPMGEHELXIGD 586
>gb|BE941720.1|BE941720 EST421299 MGHG Medicago truncatula cDNA clone pMGHG-6G12, mRNA
sequence
Length = 617
Score = 82.2 bits (173), Expect(3) = 6e-025
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RA+PATGYPGRTYRFY+GP VF FG+GLSYS+++H A P S
Sbjct: 167 RANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVS 301
Score = 39.1 bits (79), Expect(3) = 6e-025
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +2
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ CD L+ V V+N G MDG H++LV+ + PN
Sbjct: 362 VSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPN 472
Score = 31.3 bits (62), Expect(3) = 6e-025
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3 / +2
Query: 345 QLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSH 476
QL+ F ++ A V+ V C H S E G + I G H
Sbjct: 482 QLVNFHKTYVPAGSKTRVKVGVHVCNHLSAVDEFGVRRIPMGEH 613
>gb|BF648516.1|BF648516 NF048E02EC1F1018 Elicited cell culture Medicago truncatula cDNA
clone NF048E02EC 5', mRNA sequence
Length = 592
Score = 82.2 bits (173), Expect(3) = 2e-023
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RA+PATGYPGRTYRFY+GP VF FG+GLSYS+++H A P S
Sbjct: 31 RANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVS 165
Score = 39.1 bits (79), Expect(3) = 2e-023
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +1
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ CD L+ V V+N G MDG H++LV+ + PN
Sbjct: 226 VSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPN 336
Score = 26.3 bits (51), Expect(3) = 2e-023
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3 / +2
Query: 408 VSPCKHFSRATEDGRKVIDQGSHFVMVGE 494
V C H S E G + I G H + +G+
Sbjct: 410 VHVCNHLSAVDEFGVRKIPMGEHELQIGD 496
>gb|BG645994.1|BG645994 EST507613 KV3 Medicago truncatula cDNA clone pKV3-48M5 5' end, mRNA
sequence
Length = 666
Score = 71.2 bits (149), Expect(3) = 3e-023
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3 / -3
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKP 125
R+DPATGYPGRTYRFY+G TVF+FG G+S+ H+ P
Sbjct: 652 RSDPATGYPGRTYRFYKGETVFSFGDGMSFGTVEHKIVKAP 530
Score = 39.1 bits (79), Expect(3) = 3e-023
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3 / -3
Query: 336 PASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEMS 512
P L+GF+ + L V F+V C S E G + + G H + VG + +S
Sbjct: 340 PQKHLLGFEKVQLAGKSEGMVRFKVDVCNDLSVVDELGNRKVPLGDHMLHVGNLKHSLS 164
Score = 36.3 bits (73), Expect(3) = 3e-023
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3 / -3
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ E C L F + V+N G M HSVL+F PN
Sbjct: 463 VADEHCQNLAFDIHLSVKNMGKMSSSHSVLLFFTPPN 353
>gb|AW559321.1|AW559321 EST306364 DSIR Medicago truncatula cDNA clone pDSIR-25I17, mRNA
sequence
Length = 570
Score = 79.0 bits (166), Expect(3) = 2e-022
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRF 113
RADP++GYPGRTYRFY GP V+ FGYGLSYS YS+ F
Sbjct: 163 RADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNF 273
Score = 36.3 bits (73), Expect(3) = 2e-022
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3 / +1
Query: 195 VEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDGS 329
V +G ETC + + + N G M GKH VL+ ++ +G+
Sbjct: 361 VSELGEETCKTMSISVTLGITNTGSMAGKHPVLLVVKPKKGRNGN 495
Score = 28.6 bits (56), Expect(3) = 2e-022
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3 / +1
Query: 327 SGRPASQLIGFQSLHLRATQTAHVEFEV 410
+G P QL+GF+S+ + V FEV
Sbjct: 487 NGNPVKQLVGFESVTVEGGGKGEVGFEV 570
>gb|CG955622.1|CG955622 MBENR49TR mth2 Medicago truncatula genomic clone 10I2, DNA sequence
Length = 939
Score = 71.6 bits (150), Expect(3) = 4e-022
Identities = 26/45 (57%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RADP+ GYPGRTYRFY G ++ FG+GLSYS +S+R + P S
Sbjct: 547 RADPSRGYPGRTYRFYTGSRIYGFGHGLSYSDFSYRVLSAPSKLS 681
Score = 45.5 bits (93), Expect(3) = 4e-022
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3 / +1
Query: 213 ETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDGS 329
+ C+ L F + V N G MDG H V++F +WP GS
Sbjct: 778 QNCNSLSFSVHISVMNVGDMDGSHVVMLFSKWPKNIQGS 894
Score = 25.8 bits (50), Expect(3) = 4e-022
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 330 GRPASQLIGFQSLH 371
G P SQL+GF LH
Sbjct: 889 GSPESQLVGFSRLH 930
>gb|AW775281.1|AW775281 EST334346 DSIL Medicago truncatula cDNA clone pDSIL-1C9, mRNA
sequence
Length = 731
Score = 79.0 bits (166), Expect(3) = 7e-022
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +3 / +1
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRF 113
RADP++GYPGRTYRFY GP V+ FGYGLSYS YS+ F
Sbjct: 334 RADPSSGYPGRTYRFYTGPKVYEFGYGLSYSNYSYNF 444
Score = 39.6 bits (80), Expect(3) = 7e-022
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3 / +1
Query: 195 VEAIGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPNATDGS 329
V +G ETC + + + N G M GKH VL+F++ +G+
Sbjct: 532 VSELGEETCKTMSISVTLGITNTGSMAGKHPVLLFVKPKKGRNGN 666
Score = 23.5 bits (45), Expect(3) = 7e-022
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 327 SGRPASQLIGFQSL 368
+G P QL+GF+S+
Sbjct: 658 NGNPVKQLVGFESV 699
>gb|BQ146961.1|BQ146961 NF030C06FL1F1049 Developing flower Medicago truncatula cDNA clone
NF030C06FL 5', mRNA sequence
Length = 542
Score = 82.2 bits (173), Expect(2) = 7e-021
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = +3 / +2
Query: 3 RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKPPPTS 137
RA+PATGYPGRTYRFY+GP VF FG+GLSYS+++H A P S
Sbjct: 173 RANPATGYPGRTYRFYKGPVVFPFGHGLSYSRFTHSLALAPKQVS 307
Score = 39.1 bits (79), Expect(2) = 7e-021
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +2
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
+ CD L+ V V+N G MDG H++LV+ + PN
Sbjct: 368 VSHANCDELEVGFHVDVKNEGSMDGAHTLLVYSKAPN 478
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 287,743,622
Number of Sequences: 392609
Number of extensions: 3135553
Number of successful extensions: 28487
Number of sequences better than 1.0e-020: 22
length of database: 147,244,331
effective HSP length: 53
effective length of database: 126,436,054
effective search space used: 16057378858
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)