TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161200.2.1
(845 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF648440.1|BF648440 NF047E08EC1F1066 Elicited cell cultu... 202 6e-055
gb|BQ139914.1|BQ139914 NF026G11PH1F1087 Phoma-infected Medi... 200 4e-054
gb|AC151000.3| Medicago truncatula chromosome 2 BAC clone m... 195 1e-052
gb|BI310382.1|BI310382 EST5312132 GESD Medicago truncatula ... 91 7e-042
emb|CT030180.3| M.truncatula DNA sequence from clone MTH2-1... 160 2e-039
gb|AC144618.7| Medicago truncatula clone mth2-21d12, comple... 160 2e-039
gb|AC127169.13| Medicago truncatula clone mth2-36n3, comple... 161 1e-038
gb|CG959762.1|CG959762 MBEKX59TR mth2 Medicago truncatula g... 148 4e-037
gb|CG934104.1|CG934104 MBENC70TR mth2 Medicago truncatula g... 153 3e-036
gb|CG961263.1|CG961263 MBEJP43TRB mth2 Medicago truncatula ... 148 1e-034
gb|BQ165568.1|BQ165568 EST611437 KVKC Medicago truncatula c... 141 1e-032
gb|CA922432.1|CA922432 EST640150 MTUS Medicago truncatula c... 141 1e-032
gb|AY308955.1| Medicago truncatula cellulase mRNA, complete... 141 1e-032
gb|AC150784.20| Medicago truncatula clone mth2-134j11, WORK... 137 2e-031
gb|AJ499329.1|AJ499329 AJ499329 MTGIM Medicago truncatula c... 133 5e-030
gb|CA921503.1|CA921503 EST639221 MTUS Medicago truncatula c... 66 3e-023
gb|BM779887.1|BM779887 EST590463 KV2 Medicago truncatula cD... 66 3e-023
gb|BM779993.1|BM779993 EST590569 KV2 Medicago truncatula cD... 66 3e-023
gb|AJ846661.1|AJ846661 AJ846661 MtSN0 Medicago truncatula c... 100 3e-023
gb|AL379245.1|AL379245 MtBB44B11F1 MtBB Medicago truncatula... 65 4e-023
gb|AC138453.8| Medicago truncatula clone mth2-20m14, comple... 70 5e-023
gb|BG588186.1|BG588186 EST489995 MHRP- Medicago truncatula ... 65 3e-022
gb|BI270018.1|BI270018 NF004C05FL1F1038 Developing flower M... 89 9e-021
>gb|BF648440.1|BF648440 NF047E08EC1F1066 Elicited cell culture Medicago truncatula cDNA
clone NF047E08EC 5', mRNA sequence
Length = 647
Score = 202 bits (435), Expect(2) = 6e-055
Identities = 81/127 (63%), Positives = 93/127 (73%)
Frame = -2 / +2
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P ++ L + Q+DYI KNP KMSY VGF N YPK HHR ASIP N V
Sbjct: 59 PGWYCGPNFFSTEKLREFARTQIDYILGKNPRKMSYVVGFGNHYPKHVHHRAASIPKNKV 238
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWR++ K NPNILVGAMVAGPDR DG+ DVR NYNYTEPTLA NAGLVAAL+
Sbjct: 239 KYNCKGGWKWRESSKPNPNILVGAMVAGPDRHDGFHDVRKNYNYTEPTLAGNAGLVAALV 418
Query: 472 SISDIKT 452
++S K+
Sbjct: 419 ALSGDKS 439
Score = 34.1 bits (68), Expect(2) = 6e-055
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1 / +1
Query: 431 EHHLLCDPSNVSDTAAAAISMETIERQTSEYIFPPKHQHR 312
++ LC +NVS+T + +METI Y+F K+ R
Sbjct: 454 KYPFLCCSANVSNTTTTSSTMETIRXHAVCYLFSSKYHER 573
>gb|BQ139914.1|BQ139914 NF026G11PH1F1087 Phoma-infected Medicago truncatula cDNA clone
NF026G11PH 5', mRNA sequence
Length = 639
Score = 200 bits (431), Expect(2) = 4e-054
Identities = 81/127 (63%), Positives = 92/127 (72%)
Frame = -2 / +3
Query: 832 PXXYXXPXXYTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGV 653
P Y P ++ L + Q+DYI KNP KMSY VGF N YPK HHR ASIP N V
Sbjct: 69 PGWYCGPNFFSTEKLREFARTQIDYILGKNPRKMSYVVGFGNHYPKHVHHRAASIPKNKV 248
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALI 473
KY CKGG+KWR++ K NPNILVGAMVAGPDR DG+ DVR NYNYTEPTLA NAGLVAAL
Sbjct: 249 KYNCKGGWKWRESSKPNPNILVGAMVAGPDRHDGFHDVRKNYNYTEPTLAGNAGLVAALX 428
Query: 472 SISDIKT 452
++S K+
Sbjct: 429 ALSGDKS 449
Score = 33.1 bits (66), Expect(2) = 4e-054
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1 / +2
Query: 431 EHHLLCDPSNVSDTAAAAISMETIERQTSEYIFPPKHQHR 312
++ LC +NVS+T + +METI Y+F K+ R
Sbjct: 464 KYPFLCCSANVSNTTTTSSTMETIRXHAVCYLFSXKYHXR 583
>gb|AC151000.3| Medicago truncatula chromosome 2 BAC clone mth2-193p1, complete
sequence
Length = 120579
Score = 195 bits (420), Expect(2) = 1e-052
Identities = 77/106 (72%), Positives = 86/106 (81%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF N YPK HHR ASIP N VKY CKGG+KWR++ K NPNIL
Sbjct: 25067 QIDYILGKNPRKMSYVVGFGNHYPKHVHHRAASIPKNKVKYNCKGGWKWRESSKPNPNIL 25246
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKT 452
VGAMVAGPDR DG+ DVR NYNYTEPTLA NAGLVAAL+++S K+
Sbjct: 25247 VGAMVAGPDRHDGFHDVRKNYNYTEPTLAGNAGLVAALVALSGDKS 25384
Score = 33.1 bits (66), Expect(2) = 1e-052
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1 / +1
Query: 431 EHHLLCDPSNVSDTAAAAISMETIERQTSEYIFPPKHQHR 312
++ LC +NVS+T + +METI Y+F K+ R
Sbjct: 25399 KYPFLCCSANVSNTTTTSSTMETIRCHAVCYLFSSKYHER 25518
>gb|BI310382.1|BI310382 EST5312132 GESD Medicago truncatula cDNA clone pGESD7N4 5' end,
mRNA sequence
Length = 579
Score = 90.9 bits (192), Expect(3) = 7e-042
Identities = 34/49 (69%), Positives = 37/49 (75%)
Frame = -2 / +1
Query: 736 KMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
KMSY GF N YPK HHR ASIP N VKY CKGG+KWR++ K NPNIL
Sbjct: 28 KMSYVDGFGNHYPKHVHHRAASIPKNKVKYNCKGGWKWRESSKPNPNIL 174
Score = 86.8 bits (183), Expect(3) = 7e-042
Identities = 35/46 (76%), Positives = 40/46 (86%)
Frame = -2 / +2
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKT 452
VGAMVAGPDR DG+ DVR NYNYTEPTLA NAGLVAAL+++S K+
Sbjct: 176 VGAMVAGPDRHDGFHDVRKNYNYTEPTLAGNAGLVAALVALSGDKS 313
Score = 33.1 bits (66), Expect(3) = 7e-042
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1 / +1
Query: 431 EHHLLCDPSNVSDTAAAAISMETIERQTSEYIFPPKHQHR 312
++ LC +NVS+T + +METI Y+F K+ R
Sbjct: 328 KYPFLCCSANVSNTTTTSSTMETIRCHAVCYLFSSKYHER 447
>emb|CT030180.3| M.truncatula DNA sequence from clone MTH2-177C12 on chromosome 3,
complete sequence
Length = 141577
Score = 160 bits (344), Expect(2) = 2e-039
Identities = 62/102 (60%), Positives = 76/102 (74%)
Frame = -2 / +1
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP+ MSY VG+ K+P+ HHRGASIP++ Y C GG+KWRD+ NPN +
Sbjct: 136066 QMDYIMGKNPMNMSYIVGYGEKFPRHVHHRGASIPNDHKNYSCTGGWKWRDSPDRNPNNV 136245
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISIS 464
GAMV GP+ D + D R NYNYTEPTLA NAGLVAALIS++
Sbjct: 136246 TGAMVGGPNPFDQFHDSRKNYNYTEPTLAGNAGLVAALISLT 136371
Score = 23.5 bits (45), Expect(2) = 2e-039
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2 / +1
Query: 469 ISDIKTGRFGIDKNTIFSAI 410
IS T GID NTIF AI
Sbjct: 136360 ISLTSTTGSGIDVNTIFEAI 136419
>gb|AC144618.7| Medicago truncatula clone mth2-21d12, complete sequence
Length = 106554
Score = 160 bits (344), Expect(2) = 2e-039
Identities = 62/102 (60%), Positives = 76/102 (74%)
Frame = -2 / -3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP+ MSY VG+ K+P+ HHRGASIP++ Y C GG+KWRD+ NPN +
Sbjct: 90541 QMDYIMGKNPMNMSYIVGYGEKFPRHVHHRGASIPNDHKNYSCTGGWKWRDSPDRNPNNV 90362
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISIS 464
GAMV GP+ D + D R NYNYTEPTLA NAGLVAALIS++
Sbjct: 90361 TGAMVGGPNPFDQFHDSRKNYNYTEPTLAGNAGLVAALISLT 90236
Score = 23.5 bits (45), Expect(2) = 2e-039
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2 / -3
Query: 469 ISDIKTGRFGIDKNTIFSAI 410
IS T GID NTIF AI
Sbjct: 90247 ISLTSTTGSGIDVNTIFEAI 90188
>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
Length = 124554
Score = 161 bits (346), Expect = 1e-038
Identities = 65/112 (58%), Positives = 80/112 (71%)
Frame = -2 / +3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP+ MSY VG+ NK+P+ HHRGASIP++ Y C G+KWRDT NPN +
Sbjct: 102168 QMDYIMCKNPMNMSYIVGYGNKFPRHVHHRGASIPNDDKHYSCIEGWKWRDTPNRNPNNI 102347
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKTGRFGID 434
VGAMV GP+ D + D+R N +YTEPTLA NAGLVAALIS++ T G D
Sbjct: 102348 VGAMVGGPNGFDQFYDLRNNNSYTEPTLAGNAGLVAALISLTSTSTIGSGFD 102503
>gb|CG959762.1|CG959762 MBEKX59TR mth2 Medicago truncatula genomic clone 77J22, DNA
sequence
Length = 930
Score = 148 bits (317), Expect(2) = 4e-037
Identities = 57/78 (73%), Positives = 62/78 (79%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF N YPK HHR ASIP N VKY CKGG+KWR++ K NPNIL
Sbjct: 665 QIDYILGKNPRKMSYVVGFGNHYPKHVHHRAASIPKNKVKYNCKGGWKWRESSKPNPNIL 844
Query: 589 VGAMVAGPDRRDGYKDVR 536
VGAMVAGPDR DG+ DVR
Sbjct: 845 VGAMVAGPDRHDGFHDVR 898
Score = 28.6 bits (56), Expect(2) = 4e-037
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / +1
Query: 532 NYNYTEPTLA 503
NYNYTEPTLA
Sbjct: 901 NYNYTEPTLA 930
>gb|CG934104.1|CG934104 MBENC70TR mth2 Medicago truncatula genomic clone 6L19, DNA sequence
Length = 882
Score = 153 bits (329), Expect = 3e-036
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = -2 / +3
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF N YPK HHR ASIP N VKY CKGG+KWR++ K NPNIL
Sbjct: 639 QIDYILGKNPRKMSYVVGFGNHYPKHVHHRAASIPKNKVKYNCKGGWKWRESSKPNPNIL 818
Query: 589 VGAMVAGPDRRDGYKDVRTNY 527
VGAMVAGPDR DG+ DVR NY
Sbjct: 819 VGAMVAGPDRHDGFHDVRKNY 881
>gb|CG961263.1|CG961263 MBEJP43TRB mth2 Medicago truncatula genomic clone 69H14, DNA
sequence
Length = 918
Score = 148 bits (317), Expect = 1e-034
Identities = 57/78 (73%), Positives = 62/78 (79%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q+DYI KNP KMSY VGF N YPK HHR ASIP N VKY CKGG+KWR++ K NPNIL
Sbjct: 665 QIDYILGKNPRKMSYVVGFGNHYPKHVHHRAASIPKNKVKYNCKGGWKWRESSKPNPNIL 844
Query: 589 VGAMVAGPDRRDGYKDVR 536
VGAMVAGPDR DG+ DVR
Sbjct: 845 VGAMVAGPDRHDGFHDVR 898
>gb|BQ165568.1|BQ165568 EST611437 KVKC Medicago truncatula cDNA clone pKVKC-10B7, mRNA
sequence
Length = 781
Score = 141 bits (303), Expect = 1e-032
Identities = 53/115 (46%), Positives = 79/115 (68%)
Frame = -2 / -2
Query: 805 YTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYK 626
+++ +L Q++YI +NP+KMSY VG+ +K+P + HHR ASIP + Y C G
Sbjct: 567 FSVSMLRDFSSSQVNYILGQNPMKMSYLVGYGDKFPVQVHHRSASIPWDKRLYNCDDGKT 388
Query: 625 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISD 461
W ++K NP +L+GAMV GPD D + D R+N +TEPT+++NAGLV+ALI++ D
Sbjct: 387 WLNSKNPNPQVLLGAMVGGPDTNDHFTDQRSNKRFTEPTISSNAGLVSALIALQD 223
>gb|CA922432.1|CA922432 EST640150 MTUS Medicago truncatula cDNA clone MTUS-53E12, mRNA
sequence
Length = 735
Score = 141 bits (303), Expect = 1e-032
Identities = 53/115 (46%), Positives = 79/115 (68%)
Frame = -2 / -1
Query: 805 YTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYK 626
+++ +L Q++YI +NP+KMSY VG+ +K+P + HHR ASIP + Y C G
Sbjct: 567 FSVSMLRDFSSSQVNYILGQNPMKMSYLVGYGDKFPVQVHHRSASIPWDKRLYNCDDGKT 388
Query: 625 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISD 461
W ++K NP +L+GAMV GPD D + D R+N +TEPT+++NAGLV+ALI++ D
Sbjct: 387 WLNSKNPNPQVLLGAMVGGPDTNDHFTDQRSNKRFTEPTISSNAGLVSALIALQD 223
>gb|AY308955.1| Medicago truncatula cellulase mRNA, complete cds
Length = 2074
Score = 141 bits (303), Expect = 1e-032
Identities = 53/115 (46%), Positives = 79/115 (68%)
Frame = -2 / +2
Query: 805 YTIXVLXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYK 626
+++ +L Q++YI +NP+KMSY VG+ +K+P + HHR ASIP + Y C G
Sbjct: 1508 FSVSMLRDFSSSQVNYILGQNPMKMSYLVGYGDKFPVQVHHRSASIPWDKRLYNCDDGKT 1687
Query: 625 WRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISD 461
W ++K NP +L+GAMV GPD D + D R+N +TEPT+++NAGLV+ALI++ D
Sbjct: 1688 WLNSKNPNPQVLLGAMVGGPDTNDHFTDQRSNKRFTEPTISSNAGLVSALIALQD 1852
>gb|AC150784.20| Medicago truncatula clone mth2-134j11, WORKING DRAFT SEQUENCE
Length = 116850
Score = 137 bits (294), Expect = 2e-031
Identities = 52/103 (50%), Positives = 74/103 (71%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q++YI +NP+KMSY VG+ +K+P + HHR ASIP + Y C G W ++K NP +L
Sbjct: 35372 QVNYILGQNPMKMSYLVGYGDKFPVQVHHRSASIPWDKRLYNCDDGKTWLNSKNPNPQVL 35551
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISD 461
+GAMV GPD D + D R+N +TEPT+++NAGLV+ALI++ D
Sbjct: 35552 LGAMVGGPDTNDHFTDQRSNKRFTEPTISSNAGLVSALIALQD 35680
>gb|AJ499329.1|AJ499329 AJ499329 MTGIM Medicago truncatula cDNA clone mtgmacc120002g06,
mRNA sequence
Length = 532
Score = 133 bits (284), Expect = 5e-030
Identities = 51/103 (49%), Positives = 72/103 (69%)
Frame = -2 / -2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYGCKGGYKWRDTKKANPNIL 590
Q++YI NP+KMSY VG+ +K+ + HHR ASIP + Y C G W ++K NP +L
Sbjct: 519 QVNYILGPNPMKMSYLVGYGDKFAVQVHHRSASIPWDKRLYNCDDGKTWLNSKNPNPQVL 340
Query: 589 VGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISD 461
+GAMV GPD D + D R+N +TEPT+++NAGLV+ALI++ D
Sbjct: 339 LGAMVGGPDTNDHFTDQRSNKRFTEPTISSNAGLVSALIALQD 211
>gb|CA921503.1|CA921503 EST639221 MTUS Medicago truncatula cDNA clone MTUS-41B6, mRNA
sequence
Length = 838
Score = 65.7 bits (137), Expect(2) = 3e-023
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = -2 / -2
Query: 643 CKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISIS 464
C G+++ + NPN+LVGA+V GPD D + D R NY +EP NA V AL S
Sbjct: 504 CNNGFQYLHSGSPNPNVLVGAIVGGPDSSDNFSDDRNNYQQSEPATYINAPFVGALAFFS 325
Score = 64.3 bits (134), Expect(2) = 3e-023
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -2 / -2
Query: 790 LXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
L K Q+DYI NP KMSY VGF KYPK HHRG+S+P
Sbjct: 660 LIKLAKKQVDYILGDNPTKMSYMVGFGEKYPKHIHHRGSSLP 535
>gb|BM779887.1|BM779887 EST590463 KV2 Medicago truncatula cDNA clone pKV2-53G18, mRNA
sequence
Length = 795
Score = 65.7 bits (137), Expect(2) = 3e-023
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = -2 / -3
Query: 643 CKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISIS 464
C G+++ + NPN+LVGA+V GPD D + D R NY +EP NA V AL S
Sbjct: 508 CNNGFQYLHSGSPNPNVLVGAIVGGPDSSDNFSDDRNNYQQSEPATYINAPFVGALAFFS 329
Score = 64.3 bits (134), Expect(2) = 3e-023
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -2 / -3
Query: 790 LXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
L K Q+DYI NP KMSY VGF KYPK HHRG+S+P
Sbjct: 664 LIKLAKKQVDYILGDNPTKMSYMVGFGEKYPKHIHHRGSSLP 539
>gb|BM779993.1|BM779993 EST590569 KV2 Medicago truncatula cDNA clone pKV2-53L17, mRNA
sequence
Length = 730
Score = 65.7 bits (137), Expect(2) = 3e-023
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = -2 / -2
Query: 643 CKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISIS 464
C G+++ + NPN+LVGA+V GPD D + D R NY +EP NA V AL S
Sbjct: 507 CNNGFQYLHSGSPNPNVLVGAIVGGPDSSDNFSDDRNNYQQSEPATYINAPFVGALAFFS 328
Score = 64.3 bits (134), Expect(2) = 3e-023
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -2 / -2
Query: 790 LXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
L K Q+DYI NP KMSY VGF KYPK HHRG+S+P
Sbjct: 663 LIKLAKKQVDYILGDNPTKMSYMVGFGEKYPKHIHHRGSSLP 538
>gb|AJ846661.1|AJ846661 AJ846661 MtSN0 Medicago truncatula cDNA clone MtN003C10S6, mRNA
sequence
Length = 307
Score = 100 bits (213), Expect(2) = 3e-023
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -2 / +1
Query: 619 DTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKT 452
++ K NPNILVG MVAGPDR DG+ DVR NYNYTEPTLA NAGLVAAL+++S K+
Sbjct: 13 ESSKPNPNILVGVMVAGPDRHDGFHDVRKNYNYTEPTLAGNAGLVAALVALSGDKS 180
Score = 29.5 bits (58), Expect(2) = 3e-023
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1 / +3
Query: 431 EHHLLCDPSNVSDTAAAAISMETIERQTSEYIFPPKH 321
++ LC +NVS+T + +M+TI Y+F K+
Sbjct: 195 KYPFLCCSANVSNTTTTSSTMQTIRCHAVCYLFSSKY 305
>gb|AL379245.1|AL379245 MtBB44B11F1 MtBB Medicago truncatula cDNA clone MtBB44B11 T3, mRNA
sequence
Length = 473
Score = 65.2 bits (136), Expect(2) = 4e-023
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = -2 / +2
Query: 643 CKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
C G+++ + NPN+LVGA+V GPD D + D R NY +EP NA V AL
Sbjct: 302 CNNGFQYLHSGSPNPNVLVGAIVGGPDSSDNFSDDRNNYQQSEPATYINAPFVGAL 469
Score = 64.3 bits (134), Expect(2) = 4e-023
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -2 / +2
Query: 790 LXKXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIP 665
L K Q+DYI NP KMSY VGF KYPK HHRG+S+P
Sbjct: 146 LIKLAKKQVDYILGDNPTKMSYMVGFGEKYPKHIHHRGSSLP 271
>gb|AC138453.8| Medicago truncatula clone mth2-20m14, complete sequence
Length = 144639
Score = 70.3 bits (147), Expect(2) = 5e-023
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = -2 / -3
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
K GCK G+KW D+ + NPN+ GA+V GP + Y D R N EPT +NA LVA L
Sbjct: 66997 KTGCKDGFKWYDSPQPNPNVAFGAIVGGPFFNETYNDFRNNSMQAEPTTYSNALLVALL 66821
Score = 58.8 bits (122), Expect(2) = 5e-023
Identities = 21/42 (50%), Positives = 30/42 (71%)
Frame = -2 / -3
Query: 784 KXXXXQLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHN 659
K Q++Y+ +NP+KMS+ VG+ + YPK HHRG+SIP N
Sbjct: 67126 KLKLFQVEYVLGENPMKMSFLVGYGSNYPKYIHHRGSSIPVN 67001
>gb|BG588186.1|BG588186 EST489995 MHRP- Medicago truncatula cDNA clone pMHRP-41J5, mRNA
sequence
Length = 723
Score = 65.2 bits (136), Expect(2) = 3e-022
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = -2 / +2
Query: 652 KYGCKGGYKWRDTKKANPNILVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAAL 476
K C G+ ++ NPNILVGA+V GPD+ D + D R++Y +EP NA LV L
Sbjct: 293 KIQCSAGFSVMSSQSPNPNILVGAVVGGPDQHDRFPDKRSDYEQSEPATYVNAPLVGTL 469
Score = 61.6 bits (128), Expect(2) = 3e-022
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = -2 / +2
Query: 769 QLDYIXXKNPLKMSYXVGFXNKYPKRPHHRGASIPHNGVKYG 644
Q+DY+ NPLKMSY VG+ +YP+R HHRG+S+P V G
Sbjct: 167 QVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSMAVHPG 292
>gb|BI270018.1|BI270018 NF004C05FL1F1038 Developing flower Medicago truncatula cDNA clone
NF004C05FL 5', mRNA sequence
Length = 526
Score = 88.6 bits (187), Expect(2) = 9e-021
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = -2 / +1
Query: 592 LVGAMVAGPDRRDGYKDVRTNYNYTEPTLAANAGLVAALISISDIKT 452
LVGAMVAGPDR DG+ DVR NYNYTEPTLA NAGLVAAL+++S K+
Sbjct: 1 LVGAMVAGPDRHDGFHDVRKNYNYTEPTLAGNAGLVAALVALSGDKS 141
Score = 33.1 bits (66), Expect(2) = 9e-021
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1 / +3
Query: 431 EHHLLCDPSNVSDTAAAAISMETIERQTSEYIFPPKHQHR 312
++ LC +NVS+T + +METI Y+F K+ R
Sbjct: 156 KYPFLCCSANVSNTTTTSSTMETIRCHAVCYLFSSKYHER 275
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 730,492,572
Number of Sequences: 392609
Number of extensions: 9501765
Number of successful extensions: 46438
Number of sequences better than 1.0e-020: 26
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 28611862015
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)