TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805022.2.2
(1462 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX538715.1|CX538715 s13dNF0IF09GS075_460682 Germinating ... 373 e-102
gb|BG453840.1|BG453840 NF094G07LF1F1053 Developing leaf Med... 366 e-101
gb|CX535337.1|CX535337 s13dNF39H06MJ060_388843 Methyl Jasmo... 340 3e-092
gb|CX530692.1|CX530692 s13dNF58F03MJ028_247400 Methyl Jasmo... 288 1e-076
gb|BF519495.1|BF519495 EST456958 DSIL Medicago truncatula c... 264 3e-069
gb|BF647183.1|BF647183 NF040A08EC1F1056 Elicited cell cultu... 106 3e-039
gb|DW016038.1|DW016038 EST1224999 MTY Medicago truncatula c... 105 3e-033
gb|BI311161.1|BI311161 EST5312911 GESD Medicago truncatula ... 104 4e-032
gb|CA917495.1|CA917495 EST641642 GPOD Medicago truncatula c... 101 4e-029
gb|BG645317.1|BG645317 EST506936 KV3 Medicago truncatula cD... 86 2e-028
gb|BG649060.1|BG649060 EST510679 HOGA Medicago truncatula c... 96 2e-027
gb|BG450610.1|BG450610 NF036E05DT1F1039 Drought Medicago tr... 125 2e-027
gb|BE941370.1|BE941370 EST420949 MGHG Medicago truncatula c... 83 2e-023
gb|CX517331.1|CX517331 s13dNF07G08VI068_399681 Virus-Infect... 83 2e-023
gb|BE999716.1|BE999716 EST431439 GVSN Medicago truncatula c... 82 4e-023
gb|AI974610.1|AI974610 T113060e KV2 Medicago truncatula cDN... 104 5e-022
>gb|CX538715.1|CX538715 s13dNF0IF09GS075_460682 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 573
Score = 373 bits (809), Expect = e-102
Identities = 151/179 (84%), Positives = 167/179 (93%)
Frame = +2 / +1
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+EIIDMCDYAVGLSRQLNGSIIPSERP+HMM EVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 37 QEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACI 216
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA+TK+++ VLE+N LPGAIFTSFCGG +IGQAI+ D RI
Sbjct: 217 ALVCGNCVVWKGAPTTPLITIAITKLISEVLERNKLPGAIFTSFCGGADIGQAISKDRRI 396
Query: 362 PLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTA 538
PLVSFTGS++ G VQ+ V+ RFGKCLLELSGNNAIIVMDDADI+LAVRS+ FAAVGTA
Sbjct: 397 PLVSFTGSSKVGAEVQKTVNERFGKCLLELSGNNAIIVMDDADIKLAVRSIFFAAVGTA 573
Score = 145 bits (311), Expect = 2e-033
Identities = 72/176 (40%), Positives = 108/176 (61%)
Frame = -1 / -1
Query: 532 TNSSEQDRSHS*LDICIIHNNDGIVSAKFKKAFTKSCTNLLLNH*TSPCTSSE*NQRYPN 353
T+S +++R++S ICIIH+ + IV+ + AF KS + L T S +*NQ +
Sbjct: 567 THSCKENRAYSQFYICIIHDYNCIVTT*LQ*AFAKSFIHCFLYLRTHL*ASGK*NQWNAS 388
Query: 352 VKGNCLTNFSAPTKRCKNCAWQVVLLQYTSHYFCHCNSDQWSCWSTFPDDTISTDQSNAS 173
V CL N S T+R + C V L+ + C+ NS QW WS+ PD T++TD NAS
Sbjct: 387 VFRYCLPNISTSTERGEYCPR*FVPLKNFRY*LCNSNSYQWCSWSSLPDYTVTTD*CNAS 208
Query: 172 IPTKHSTREIKCRYNTHNSKGIPHLHHHMVWSFRWYNGSI*LAT*PHSIITHVDDF 5
IP+ +ST +++ + S +P+L HHM+W+FRW N SI L+ *P+SIITH+++F
Sbjct: 207 IPS*NSTWKVESSDYANYS*WVPYLKHHMIWTFRWDN*SIQLSA*PNSIITHINNF 40
Score = 127 bits (272), Expect(2) = 1e-059
Identities = 55/71 (77%), Positives = 59/71 (83%)
Frame = -2 / -2
Query: 216 PFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIWFGRSDGIMDPFSWRLS 37
PFQTTQ PQT AMQAF P TA GKL AVITPT P GFHTS II GRSDGI+DPF+ RLS
Sbjct: 251 PFQTTQLPQTNAMQAFHPRTAHGKLKAVITPTIPSGFHTSNII*SGRSDGIIDPFNCRLS 72
Query: 36 PTA*SHMSMIS 4
PTA*SH+S+IS
Sbjct: 71 PTA*SHISIIS 39
Score = 125 bits (267), Expect(2) = 1e-059
Identities = 56/90 (62%), Positives = 67/90 (74%)
Frame = -2 / -2
Query: 537 AVPTAANKTDRTASWISASSITMMALFPLSSRRHLPNLALTCC*TIRPALVLPVNETKGI 358
AVPTAA K +RTAS+ISASS+T++AL PL+S +HLPNL+ T T P LPVNET G+
Sbjct: 572 AVPTAAKKIERTASFISASSMTIIALLPLNSSKHLPNLSFTVFCTSAPTFELPVNETSGM 393
Query: 357 LMSRAIA*PISVPPQKDVKIAPGKLFFSNT 268
+S IA PIS PPQK+V IAPG LF S T
Sbjct: 392 RLSFDIACPISAPPQKEVNIAPGNLFLSRT 303
Score = 93.2 bits (197), Expect(3) = 1e-029
Identities = 42/96 (43%), Positives = 55/96 (57%)
Frame = +1 / +3
Query: 151 LCCAWLECLHCFGLWKLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*N 330
+CC+ +ECLHC LW LC LE SN + D+YC K + * EEQ+ N ++FLW *
Sbjct: 186 MCCSRMECLHCISLW*LCSLEGSSNYTIDNYCYYKANI*SS*EEQITWGNIHLFLWRC*Y 365
Query: 331 WSSNCP*H*DTFGFIHWKYKGWSNGSATS*CKIW*M 438
W+ N + GFI+ K KG G+ S KIW M
Sbjct: 366 WAGNIERQTHSTGFIYRKLKGGCGGTENSE*KIWQM 473
Score = 44.6 bits (91), Expect(3) = 1e-029
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 4 GNHRHV*LCCGAKSPTKWIHYTI*TTKPYDDGGVE 108
GN+ +V*LCC AK +WI+Y I T++ YD G+E
Sbjct: 39 GNY*YV*LCCWAKPTIEWINYPIGTSRSYDV*GME 143
Score = 32.7 bits (65), Expect(3) = 1e-029
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 460 QCHHCYG*CRYPASCAICLVRCCWY 534
QC++ +G*CRY C + + C Y
Sbjct: 495 QCNYSHG*CRYKTGCTLYFLCSCGY 569
>gb|BG453840.1|BG453840 NF094G07LF1F1053 Developing leaf Medicago truncatula cDNA clone
NF094G07LF 5', mRNA sequence
Length = 685
Score = 366 bits (793), Expect(2) = e-101
Identities = 148/177 (83%), Positives = 164/177 (92%)
Frame = +2 / +2
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+EIIDMCDYAVGLSRQLNGSIIPSERP+HMM EVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 119 QEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACI 298
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA+TK+++ VLE+N LPGAIFTSFCGG +IGQAI+ D RI
Sbjct: 299 ALVCGNCVVWKGAPTTPLITIAITKLISEVLERNKLPGAIFTSFCGGADIGQAISKDRRI 478
Query: 362 PLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVG 532
PLVSFTGS++ G VQ+ V+ RFGKCLLELSGNNAIIVMDDA I+LAVRS+ FAAVG
Sbjct: 479 PLVSFTGSSKVGAEVQKTVNERFGKCLLELSGNNAIIVMDDAXIKLAVRSIFFAAVG 649
Score = 140 bits (301), Expect = 4e-032
Identities = 70/175 (40%), Positives = 106/175 (60%)
Frame = -1 / -1
Query: 529 NSSEQDRSHS*LDICIIHNNDGIVSAKFKKAFTKSCTNLLLNH*TSPCTSSE*NQRYPNV 350
+S +++R++S CIIH+ + IV+ + AF KS + L T S +*NQ +V
Sbjct: 646 HSCKENRAYSQFYXCIIHDYNCIVTT*LQ*AFAKSFIHCFLYLRTHL*ASGK*NQWNASV 467
Query: 349 KGNCLTNFSAPTKRCKNCAWQVVLLQYTSHYFCHCNSDQWSCWSTFPDDTISTDQSNASI 170
CL N S T+R + C V L+ + C+ NS QW WS+ PD T++TD NASI
Sbjct: 466 FRYCLPNISTSTERGEYCPR*FVPLKNFRY*LCNSNSYQWCSWSSLPDYTVTTD*CNASI 287
Query: 169 PTKHSTREIKCRYNTHNSKGIPHLHHHMVWSFRWYNGSI*LAT*PHSIITHVDDF 5
P+ +ST +++ + S +P+L HHM+W+FRW N SI L+ *P+SIITH+++F
Sbjct: 286 PS*NSTWKVESSDYANYS*WVPYLKHHMIWTFRWDN*SIQLSA*PNSIITHINNF 122
Score = 127 bits (272), Expect(2) = 6e-058
Identities = 55/71 (77%), Positives = 59/71 (83%)
Frame = -2 / -2
Query: 216 PFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIWFGRSDGIMDPFSWRLS 37
PFQTTQ PQT AMQAF P TA GKL AVITPT P GFHTS II GRSDGI+DPF+ RLS
Sbjct: 333 PFQTTQLPQTNAMQAFHPRTAHGKLKAVITPTIPSGFHTSNII*SGRSDGIIDPFNCRLS 154
Query: 36 PTA*SHMSMIS 4
PTA*SH+S+IS
Sbjct: 153 PTA*SHISIIS 121
Score = 119 bits (255), Expect(2) = 6e-058
Identities = 53/88 (60%), Positives = 64/88 (72%)
Frame = -2 / -2
Query: 531 PTAANKTDRTASWISASSITMMALFPLSSRRHLPNLALTCC*TIRPALVLPVNETKGILM 352
PTAA K +RTAS+I ASS+T++AL PL+S +HLPNL+ T T P LPVNET G+ +
Sbjct: 648 PTAAKKIERTASFIXASSMTIIALLPLNSSKHLPNLSFTVFCTSAPTFELPVNETSGMRL 469
Query: 351 SRAIA*PISVPPQKDVKIAPGKLFFSNT 268
S IA PIS PPQK+V IAPG LF S T
Sbjct: 468 SFDIACPISAPPQKEVNIAPGNLFLSRT 385
Score = 93.2 bits (197), Expect(3) = 3e-028
Identities = 42/96 (43%), Positives = 55/96 (57%)
Frame = +1 / +1
Query: 151 LCCAWLECLHCFGLWKLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*N 330
+CC+ +ECLHC LW LC LE SN + D+YC K + * EEQ+ N ++FLW *
Sbjct: 268 MCCSRMECLHCISLW*LCSLEGSSNYTIDNYCYYKANI*SS*EEQITWGNIHLFLWRC*Y 447
Query: 331 WSSNCP*H*DTFGFIHWKYKGWSNGSATS*CKIW*M 438
W+ N + GFI+ K KG G+ S KIW M
Sbjct: 448 WAGNIERQTHSTGFIYRKLKGGCGGTENSE*KIWQM 555
Score = 44.6 bits (91), Expect(3) = 3e-028
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 4 GNHRHV*LCCGAKSPTKWIHYTI*TTKPYDDGGVE 108
GN+ +V*LCC AK +WI+Y I T++ YD G+E
Sbjct: 121 GNY*YV*LCCWAKPTIEWINYPIGTSRSYDV*GME 225
Score = 27.6 bits (54), Expect(3) = 3e-028
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 460 QCHHCYG*CRYPASCAICLVRCC 528
QC++ +G*C Y C + + C
Sbjct: 577 QCNYSHG*CXYKTGCTLYFLCSC 645
Score = 24.4 bits (47), Expect(2) = e-101
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 530 GTAGQRCTTCR 562
GTAG R TTCR
Sbjct: 648 GTAGXRXTTCR 680
>gb|CX535337.1|CX535337 s13dNF39H06MJ060_388843 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 526
Score = 340 bits (737), Expect = 3e-092
Identities = 136/161 (84%), Positives = 150/161 (93%)
Frame = +2 / +3
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+EIIDMCDYAVGLSRQLNGSIIPSERP+HMM EVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 42 QEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACI 221
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA+TK+++ VLE+N LPGAIFTSFCGG +IGQAI+ D RI
Sbjct: 222 ALVCGNCVVWKGAPTTPLITIAITKLISEVLERNKLPGAIFTSFCGGADIGQAISKDRRI 401
Query: 362 PLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDD 484
PLVSFTGS++ G VQ+ V+ RFGKCLLELSGNNAIIVMDD
Sbjct: 402 PLVSFTGSSKVGAEVQKTVNERFGKCLLELSGNNAIIVMDD 524
Score = 131 bits (280), Expect = 3e-029
Identities = 66/160 (41%), Positives = 96/160 (60%)
Frame = -1 / -3
Query: 484 IIHNNDGIVSAKFKKAFTKSCTNLLLNH*TSPCTSSE*NQRYPNVKGNCLTNFSAPTKRC 305
IIH+ + IV+ + AF KS + L T S +*NQ +V CL N S T+R
Sbjct: 524 IIHDYNCIVTT*LQ*AFAKSFIHCFLYLGTHL*ASGK*NQWNASVFRYCLPNISTSTERG 345
Query: 304 KNCAWQVVLLQYTSHYFCHCNSDQWSCWSTFPDDTISTDQSNASIPTKHSTREIKCRYNT 125
+ C V L+ + C+ NS QW WS+ PD T++TD NASIP+ +ST +++
Sbjct: 344 EYCPR*FVPLKNFRY*LCNSNSYQWCSWSSLPDYTVTTD*CNASIPS*NSTWKVESSDYA 165
Query: 124 HNSKGIPHLHHHMVWSFRWYNGSI*LAT*PHSIITHVDDF 5
+ S +P+L HHM+W+FRW N SI L+ *P+SIITH+++F
Sbjct: 164 NYS*WVPYLKHHMIWTFRWDN*SIQLSA*PNSIITHINNF 45
Score = 127 bits (272), Expect(2) = 3e-051
Identities = 55/71 (77%), Positives = 59/71 (83%)
Frame = -2 / -1
Query: 216 PFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIWFGRSDGIMDPFSWRLS 37
PFQTTQ PQT AMQAF P TA GKL AVITPT P GFHTS II GRSDGI+DPF+ RLS
Sbjct: 256 PFQTTQLPQTNAMQAFHPRTAHGKLKAVITPTIPSGFHTSNII*SGRSDGIIDPFNCRLS 77
Query: 36 PTA*SHMSMIS 4
PTA*SH+S+IS
Sbjct: 76 PTA*SHISIIS 44
Score = 97.3 bits (206), Expect(2) = 3e-051
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = -2 / -1
Query: 486 ASSITMMALFPLSSRRHLPNLALTCC*TIRPALVLPVNETKGILMSRAIA*PISVPPQKD 307
ASS+T++AL PL+S +HLPNL+ T T P LPVNET G+ +S IA PIS PPQK+
Sbjct: 526 ASSMTIIALLPLNSSKHLPNLSFTVFCTSAPTFELPVNETSGMRLSFDIACPISAPPQKE 347
Query: 306 VKIAPGKLFFSNT 268
V IAPG LF S T
Sbjct: 346 VNIAPGNLFLSRT 308
Score = 93.2 bits (197), Expect(2) = 3e-025
Identities = 42/96 (43%), Positives = 55/96 (57%)
Frame = +1 / +2
Query: 151 LCCAWLECLHCFGLWKLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*N 330
+CC+ +ECLHC LW LC LE SN + D+YC K + * EEQ+ N ++FLW *
Sbjct: 191 MCCSRMECLHCISLW*LCSLEGSSNYTIDNYCYYKANI*SS*EEQITWGNIHLFLWRC*Y 370
Query: 331 WSSNCP*H*DTFGFIHWKYKGWSNGSATS*CKIW*M 438
W+ N + GFI+ K KG G+ S KIW M
Sbjct: 371 WAGNIERQTHSTGFIYRKLKGGCRGTENSE*KIWQM 478
Score = 44.6 bits (91), Expect(2) = 3e-025
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +2
Query: 4 GNHRHV*LCCGAKSPTKWIHYTI*TTKPYDDGGVE 108
GN+ +V*LCC AK +WI+Y I T++ YD G+E
Sbjct: 44 GNY*YV*LCCWAKPTIEWINYPIGTSRSYDV*GME 148
>gb|CX530692.1|CX530692 s13dNF58F03MJ028_247400 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 508
Score = 288 bits (624), Expect = 1e-076
Identities = 113/132 (85%), Positives = 125/132 (94%)
Frame = +2 / +2
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACI 181
+EIIDMCDYAVGLSRQLNGSIIPSERP+HMM EVWNPLG+VGVITAFNFPCAVLGWNACI
Sbjct: 110 QEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACI 289
Query: 182 ALVCGNCVVWKGAPTTPLITIAMTKIVASVLEKNNLPGAIFTSFCGGTEIGQAIALDIRI 361
ALVCGNCVVWKGAPTTPLITIA+TK+++ VLE+N LPGAIFTSFCGG +IGQAI+ D RI
Sbjct: 290 ALVCGNCVVWKGAPTTPLITIAITKLISEVLERNKLPGAIFTSFCGGADIGQAISKDRRI 469
Query: 362 PLVSFTGSTRAG 397
PLVSFTGS++ G
Sbjct: 470 PLVSFTGSSKVG 505
Score = 127 bits (272), Expect(2) = 6e-041
Identities = 55/71 (77%), Positives = 59/71 (83%)
Frame = -2 / -2
Query: 216 PFQTTQFPQTKAMQAFQPSTAQGKLNAVITPTTPRGFHTSIIIWFGRSDGIMDPFSWRLS 37
PFQTTQ PQT AMQAF P TA GKL AVITPT P GFHTS II GRSDGI+DPF+ RLS
Sbjct: 324 PFQTTQLPQTNAMQAFHPRTAHGKLKAVITPTIPSGFHTSNII*SGRSDGIIDPFNCRLS 145
Query: 36 PTA*SHMSMIS 4
PTA*SH+S+IS
Sbjct: 144 PTA*SHISIIS 112
Score = 120 bits (257), Expect = 5e-026
Identities = 55/126 (43%), Positives = 80/126 (63%)
Frame = -1 / -1
Query: 382 SSE*NQRYPNVKGNCLTNFSAPTKRCKNCAWQVVLLQYTSHYFCHCNSDQWSCWSTFPDD 203
S +*NQ +V CL N S T+R + C V L+ + C+ NS QW WS+ PD
Sbjct: 490 SGK*NQWNASVFRYCLPNISTSTERGEYCPR*FVPLKNFRY*LCNSNSYQWCSWSSLPDY 311
Query: 202 TISTDQSNASIPTKHSTREIKCRYNTHNSKGIPHLHHHMVWSFRWYNGSI*LAT*PHSII 23
T++TD NASIP+ +ST +++ + S +P+L HHM+W+FRW N SI L+ *P+SII
Sbjct: 310 TVTTD*CNASIPS*NSTWKVESSDYANYS*WVPYLKHHMIWTFRWDN*SIQLSA*PNSII 131
Query: 22 THVDDF 5
TH+++F
Sbjct: 130 THINNF 113
Score = 84.0 bits (177), Expect(2) = 1e-022
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +1 / +1
Query: 151 LCCAWLECLHCFGLWKLCRLERCSNNSTDHYCNDKNSG*CIGEEQLARRNFYIFLWGH*N 330
+CC+ +ECLHC LW LC LE SN + D+YC K + * EEQ+ N ++FLW *
Sbjct: 259 MCCSRMECLHCISLW*LCSLEGSSNYTIDNYCYYKANI*SS*EEQITWGNIHLFLWRC*Y 438
Query: 331 WSSNCP*H*DTFGFIHWKYKG 393
W+ N + GFI+ K KG
Sbjct: 439 WAGNIERQTHSTGFIYRKLKG 501
Score = 62.9 bits (131), Expect(2) = 6e-041
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = -2 / -2
Query: 396 PALVLPVNETKGILMSRAIA*PISVPPQKDVKIAPGKLFFSNT 268
P LPVNET G+ +S IA PIS PPQK+V IAPG LF S T
Sbjct: 504 PTFELPVNETSGMRLSFDIACPISAPPQKEVNIAPGNLFLSRT 376
Score = 44.6 bits (91), Expect(2) = 1e-022
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +1
Query: 4 GNHRHV*LCCGAKSPTKWIHYTI*TTKPYDDGGVE 108
GN+ +V*LCC AK +WI+Y I T++ YD G+E
Sbjct: 112 GNY*YV*LCCWAKPTIEWINYPIGTSRSYDV*GME 216
>gb|BF519495.1|BF519495 EST456958 DSIL Medicago truncatula cDNA clone pDSIL-20J8, mRNA
sequence
Length = 444
Score = 264 bits (570), Expect = 3e-069
Identities = 112/148 (75%), Positives = 127/148 (85%)
Frame = +2 / +1
Query: 317 GGTEIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQ 496
GG +IGQAI+ D RIPLVSFTGS++ G VQ+ V+ RFGKCLLELSGNNAIIVMDDADI+
Sbjct: 1 GGADIGQAISKDRRIPLVSFTGSSKVGAEVQKTVNERFGKCLLELSGNNAIIVMDDADIK 180
Query: 497 LAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPL 676
LAVRS+ FAAVGTAGQRCTTCRRL LHE+IY LDQL +YKQV+IG+PLEKGTL+GPL
Sbjct: 181 LAVRSIFFAAVGTAGQRCTTCRRLFLHESIYANVLDQLAGLYKQVKIGNPLEKGTLVGPL 360
Query: 677 HTPASKENFLKGIQTIKSQGGKILFGGS 760
HT +S EN+ KGI IKSQGGKIL GGS
Sbjct: 361 HTRSSVENYKKGIAAIKSQGGKILTGGS 444
Score = 179 bits (386), Expect = 8e-044
Identities = 87/147 (59%), Positives = 101/147 (68%)
Frame = -2 / -2
Query: 759 DPPKRIFPP*DLIV*MPFKKFSFEAGVCSGPSKVPFSNGSPIRTCLYTSTS*SRKV*YMF 580
DPP RIFPP*D I MPF FS E VC GP++VPFS G PI TCL + S*S +
Sbjct: 443 DPPVRIFPP*DFIAAMPFL*FSTEERVCRGPTRVPFSRGFPILTCL*SPAS*SSTFA*IL 264
Query: 579 S*RISLRHVVQRCPAVPTAANKTDRTASWISASSITMMALFPLSSRRHLPNLALTCC*TI 400
S R SLR VV R PAVPTAA K +RTAS+ISASS+T++AL PL+S +HLPNL+ T T
Sbjct: 263 SCRNSLRQVVHR*PAVPTAAKKIERTASFISASSMTIIALLPLNSSKHLPNLSFTVFCTS 84
Query: 399 RPALVLPVNETKGILMSRAIA*PISVP 319
P LPVNET G+ +S IA PIS P
Sbjct: 83 APTFELPVNETSGMRLSFDIACPISAP 3
>gb|BF647183.1|BF647183 NF040A08EC1F1056 Elicited cell culture Medicago truncatula cDNA
clone NF040A08EC 5', mRNA sequence
Length = 627
Score = 106 bits (226), Expect(2) = 3e-039
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +2 / +2
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAF 142
+EIIDMCDYAVGLSRQLNGSIIPSERP+HMM EVWNPL +VGVITAF
Sbjct: 395 QEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLXIVGVITAF 535
Score = 78.0 bits (164), Expect(2) = 3e-039
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = +2 / +1
Query: 146 FPCAVLGWNACIALVCGNCVVWKGAPTTP 232
FPCAVLGWNACIALVCGNCV WKGAP TP
Sbjct: 541 FPCAVLGWNACIALVCGNCVXWKGAPXTP 627
Score = 75.8 bits (159), Expect(2) = 8e-021
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = -2 / -1
Query: 138 AVITPTTPRGFHTSIIIWFGRSDGIMDPFSWRLSPTA*SHMSMIS 4
AVITPT GFHTS II GRSDGI+DPF+ RLSPTA*SH+S+IS
Sbjct: 531 AVITPTIXSGFHTSNII*SGRSDGIIDPFNCRLSPTA*SHISIIS 397
Score = 46.9 bits (96), Expect(2) = 8e-021
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2 / -2
Query: 216 PFQTTQFPQTKAMQAFQPSTAQGKL 142
PFQ TQ PQT AMQAF P TA GK+
Sbjct: 611 PFQXTQLPQTNAMQAFHPRTAHGKV 537
>gb|DW016038.1|DW016038 EST1224999 MTY Medicago truncatula cDNA clone MTYAC48, mRNA
sequence
Length = 799
Score = 105 bits (224), Expect(2) = 3e-033
Identities = 47/144 (32%), Positives = 76/144 (52%)
Frame = +2 / +2
Query: 326 EIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAV 505
+IG A+ ++ ++FTGST G + + K LEL GN IV DDAD+ +AV
Sbjct: 365 DIGDALIASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAV 544
Query: 506 RSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTP 685
+ L A +GQ C R+++ E IY F++ L++ + +++GD +G GPL
Sbjct: 545 KGTLAAKFRNSGQTCVCANRILVQEGIYDKFVNALLDAVQSMKVGDGFSEGVSHGPLINE 724
Query: 686 ASKENFLKGIQTIKSQGGKILFGG 757
A+ + I S+G K++ GG
Sbjct: 725 AAVKKVESLIHDATSKGAKVILGG 796
Score = 58.8 bits (122), Expect(2) = 3e-033
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = +2 / +2
Query: 23 DYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNC 202
++A ++++ G IIP+ + + + P+GVVG IT +NFP A++ AL CG
Sbjct: 71 EFASEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCT 250
Query: 203 VVWKGAPTTPLITIAMTKI 259
VV K + TPL +A ++
Sbjct: 251 VVIKPSELTPLTALAAAEL 307
>gb|BI311161.1|BI311161 EST5312911 GESD Medicago truncatula cDNA clone pGESD10I5 5' end,
mRNA sequence
Length = 726
Score = 104 bits (221), Expect(2) = 4e-032
Identities = 47/144 (32%), Positives = 74/144 (51%)
Frame = +2 / +2
Query: 326 EIGQAIALDIRIPLVSFTGSTRAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAV 505
+IG A+ ++ ++FTGST G + + K LEL GN IV DDAD+ +AV
Sbjct: 272 DIGDALIASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAV 451
Query: 506 RSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTP 685
+ L A +GQ C R+++ E IY F + L++ + +++GD +G GPL
Sbjct: 452 KGTLAAKFRNSGQTCVCANRILVQEGIYDKFANALLDAVQSMKVGDGFSEGVSQGPLINE 631
Query: 686 ASKENFLKGIQTIKSQGGKILFGG 757
A + I S+G K++ GG
Sbjct: 632 AGCKKVESLIHDATSKGAKVILGG 703
Score = 56.5 bits (117), Expect(2) = 4e-032
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +2 / +2
Query: 47 QLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPT 226
++ G IIP+ + + + P+GVVG IT +NFP A++ AL CG VV K +
Sbjct: 2 RIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSEL 181
Query: 227 TPLITIAMTKI 259
TPL +A ++
Sbjct: 182 TPLTALAAAEL 214
>gb|CA917495.1|CA917495 EST641642 GPOD Medicago truncatula cDNA clone GPOD-36G20, mRNA
sequence
Length = 698
Score = 101 bits (216), Expect(2) = 4e-029
Identities = 45/109 (41%), Positives = 64/109 (58%)
Frame = +2 / +2
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +IV +D D+ A +F T GQ C+ RLI+HE+I FL+++V+
Sbjct: 92 LELGGKSPLIVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLIVHESIATEFLNRMVKWI 271
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIE 769
K ++I DPLE+G LGP+ + E LK + KS+G IL GGS E
Sbjct: 272 KNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPE 418
Score = 48.7 bits (100), Expect(2) = 4e-029
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2 / +2
Query: 797 IVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFT 940
I ++T S + KEE+FGPVL V F T +EAI++ N GL +++ +
Sbjct: 455 ITDVTTSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVIS 598
>gb|BG645317.1|BG645317 EST506936 KV3 Medicago truncatula cDNA clone pKV3-39J20 5' end,
mRNA sequence
Length = 768
Score = 86.3 bits (182), Expect(3) = 2e-028
Identities = 41/119 (34%), Positives = 59/119 (49%)
Frame = +2 / +1
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + +I+ DDADI A L + G+ C R+ + E IY F +LVE
Sbjct: 142 LELGGKSPLIIFDDADIDKATELALLGILFNKGEVCVASSRVFVQEGIYDEFEKKLVEKA 321
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
K IGDP + GP E L I+ K +G +L GG + ++G +++PTI
Sbjct: 322 KTWVIGDPFDPKVQQGPQVDKKQFEKVLSYIEHGKKEGATLLTGGKTVGNKGYYIEPTI 498
Score = 49.6 bits (102), Expect(3) = 2e-028
Identities = 19/44 (43%), Positives = 32/44 (72%)
Frame = +2 / +1
Query: 824 VVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPDI 955
+ ++E+FGPV+ + KF+T++EAI+ N+ GL++ I TK DI
Sbjct: 526 IAQDEIFGPVMALKKFKTIEEAIKSANNTRYGLAAGIVTKNLDI 657
Score = 30.4 bits (60), Expect(3) = 2e-028
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2 / +1
Query: 320 GTEIGQAIALDIRIPLVSFTGSTRAGLMVQQ 412
G G A++ + I VSFTGST+ G + Q
Sbjct: 16 GATAGAAVSSHMDIDAVSFTGSTQTGREIMQ 108
>gb|BG649060.1|BG649060 EST510679 HOGA Medicago truncatula cDNA clone pHOGA-24B8 5' end,
mRNA sequence
Length = 763
Score = 96.4 bits (204), Expect(2) = 2e-027
Identities = 43/105 (40%), Positives = 61/105 (58%)
Frame = +2 / +1
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + I+V +D D+ +F T GQ C+ RLI+HE+I F+ +LV+
Sbjct: 28 LELGGKSPIVVFEDVDLDKVAEWTIFGCFFTNGQICSATSRLIVHESIAVEFVSKLVKWA 207
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGG 757
+ ++I DPLEKG LGP+ + A + L I T KS+G IL GG
Sbjct: 208 ENIKISDPLEKGCRLGPIVSEAQYKKVLNFISTAKSEGATILTGG 342
Score = 48.7 bits (100), Expect(2) = 2e-027
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2 / +1
Query: 797 IVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFT 940
+ ++T S + +EE+FGPVL V F T +EAI++ N GL S++ +
Sbjct: 391 VTDVTTSMQIWREEVFGPVLSVKTFSTEEEAIDLANDTHYGLGSAVMS 534
>gb|BG450610.1|BG450610 NF036E05DT1F1039 Drought Medicago truncatula cDNA clone NF036E05DT
5', mRNA sequence
Length = 619
Score = 125 bits (267), Expect = 2e-027
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +2 / +1
Query: 2 REIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLG 166
+EIIDMCDYAVGLSRQLNGSIIPSERP+HMM EVWNPL +VGVITAFNFPCA LG
Sbjct: 376 QEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLXIVGVITAFNFPCAXLG 540
>gb|BE941370.1|BE941370 EST420949 MGHG Medicago truncatula cDNA clone pMGHG-3H4, mRNA
sequence
Length = 586
Score = 83.1 bits (175), Expect(2) = 2e-023
Identities = 41/134 (30%), Positives = 65/134 (48%)
Frame = +2 / +2
Query: 398 LMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILH 577
+++Q + LEL G + IV +DADI AV FA GQ C R +H
Sbjct: 14 VVLQLAAKSNLKPVTLELGGKSPFIVCEDADIDEAVELAHFALFFNQGQCCCAGSRTFVH 193
Query: 578 ENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGG 757
E +++ F+++ + +GDP + GT GP E LK I++ G + GG
Sbjct: 194 ERVHEEFVEKAKARALKRAVGDPFKSGTEQGPQIDSKQFEKILKYIRSGVENGATLETGG 373
Query: 758 SAIESEGNFVQPTI 799
+ S+G ++QPT+
Sbjct: 374 ERLGSKGYYIQPTV 415
Score = 48.7 bits (100), Expect(2) = 2e-023
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2 / +2
Query: 824 VVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPD 952
+ KEE+FGPV ++KF+ L E I+ N+ GL++ +FTK D
Sbjct: 443 IAKEEIFGPVQTILKFKDLGEVIQRANNSKYGLAAGVFTKNID 571
>gb|CX517331.1|CX517331 s13dNF07G08VI068_399681 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 546
Score = 82.6 bits (174), Expect(2) = 2e-023
Identities = 40/119 (33%), Positives = 60/119 (50%)
Frame = +2 / +1
Query: 443 LELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVY 622
LEL G + IV +DADI AV FA GQ C R +HE +++ F+++
Sbjct: 16 LELGGKSPFIVCEDADIDEAVELAHFALFFNQGQCCCAGSRTFVHERVHEEFVEKAKARA 195
Query: 623 KQVRIGDPLEKGTLLGPLHTPASKENFLKGIQTIKSQGGKILFGGSAIESEGNFVQPTI 799
+ +GDP + GT GP E LK I++ G + GG + S+G ++QPT+
Sbjct: 196 LKRAVGDPFKSGTEQGPQIDSKQFEKILKYIRSGVENGATLETGGERLGSKGYYIQPTV 372
Score = 48.7 bits (100), Expect(2) = 2e-023
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2 / +1
Query: 824 VVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFTKRPD 952
+ KEE+FGPV ++KF+ L E I+ N+ GL++ +FTK D
Sbjct: 400 IAKEEIFGPVQTILKFKDLGEVIQRANNSKYGLAAGVFTKNID 528
>gb|BE999716.1|BE999716 EST431439 GVSN Medicago truncatula cDNA clone pGVSN-24G18, mRNA
sequence
Length = 688
Score = 81.7 bits (172), Expect(2) = 4e-023
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +2 / +3
Query: 515 LFAAVGTAGQRCTTCRRLILHENIYQTFLDQLVEVYKQVRIGDPLEKGTLLGPLHTPASK 694
+F T GQ C+ RLI+HE+I FL+++V+ K ++I DPLE+G LGP+ +
Sbjct: 15 IFGCFWTNGQICSATSRLIVHESIATEFLNRMVKWIKNIKISDPLEEGCRLGPVVSEGQY 194
Query: 695 ENFLKGIQTIKSQGGKILFGGSAIE 769
E LK + KS+G IL GGS E
Sbjct: 195 EKILKFVSNAKSEGATILTGGSRPE 269
Score = 48.7 bits (100), Expect(2) = 4e-023
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2 / +3
Query: 797 IVEITPSAPVVKEELFGPVLYVMKFQTLKEAIEINNSVPQGLSSSIFT 940
I ++T S + KEE+FGPVL V F T +EAI++ N GL +++ +
Sbjct: 306 ITDVTTSMQIWKEEVFGPVLCVKTFSTEEEAIDLANDTIYGLGAAVIS 449
>gb|AI974610.1|AI974610 T113060e KV2 Medicago truncatula cDNA clone pKV2-1C14, mRNA
sequence
Length = 200
Score = 104 bits (221), Expect(2) = 5e-022
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = +2 / +2
Query: 389 RAGLMVQQQVSARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTC 559
+ G VQ+ + RFGK LLELSGNNAIIVMDDADI+LAVRS+ FAAVGTAGQRCTTC
Sbjct: 29 KVGAEVQKTANERFGKRLLELSGNNAIIVMDDADIKLAVRSIFFAAVGTAGQRCTTC 199
Score = 22.6 bits (43), Expect(2) = 5e-022
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +1
Query: 362 PLVSFTGSTRAG 397
PLVSFTGS+ G
Sbjct: 1 PLVSFTGSS*GG 36
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,581,696,558
Number of Sequences: 392609
Number of extensions: 24198900
Number of successful extensions: 93086
Number of sequences better than 1.0e-020: 20
length of database: 147,244,331
effective HSP length: 56
effective length of database: 125,258,227
effective search space used: 53861037610
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)