TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804944.2.3
(671 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW773919.1|AW773919 EST332905 KV3 Medicago truncatula cD... 142 7e-033
gb|BI309501.1|BI309501 EST530911 GPOD Medicago truncatula c... 142 7e-033
gb|BI311546.1|BI311546 EST5313296 GESD Medicago truncatula ... 142 7e-033
gb|DW016544.1|DW016544 EST1225505 MTY Medicago truncatula c... 142 7e-033
gb|AC131248.14| Medicago truncatula clone mth2-28n22, compl... 142 7e-033
gb|AL384657.1|AL384657 MtBC23F02R1 MtBC Medicago truncatula... 141 1e-032
gb|CA918394.1|CA918394 EST642541 GESD Medicago truncatula c... 141 1e-032
gb|CA919282.1|CA919282 EST637000 MTUS Medicago truncatula c... 141 1e-032
gb|BF638502.1|BF638502 NF060B02PL1F1015 Phosphate starved l... 140 2e-032
emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-4... 140 2e-032
gb|AJ500002.1|AJ500002 AJ500002 MTGIM Medicago truncatula c... 140 2e-032
gb|AJ499635.1|AJ499635 AJ499635 MTGIM Medicago truncatula c... 140 2e-032
gb|BG648585.1|BG648585 EST510204 HOGA Medicago truncatula c... 139 3e-032
gb|AW773746.1|AW773746 EST332732 KV3 Medicago truncatula cD... 136 4e-031
gb|AW776296.1|AW776296 EST335361 DSIL Medicago truncatula c... 136 4e-031
gb|BG453782.1|BG453782 NF094A06LF1F1038 Developing leaf Med... 136 4e-031
gb|AC149572.14| Medicago truncatula clone mth2-116e22, comp... 136 4e-031
emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-7... 136 4e-031
gb|AW736522.1|AW736522 EST332536 KV3 Medicago truncatula cD... 134 1e-030
gb|AW329632.2|AW329632 N200892e rootphos(-) Medicago trunca... 134 1e-030
gb|AL365795.1|AL365795 MtBA02D11R2 MtBA Medicago truncatula... 134 1e-030
gb|AL385965.1|AL385965 MtBC31G07R1 MtBC Medicago truncatula... 134 1e-030
gb|BF634847.1|BF634847 NF075E01DT1F1005 Drought Medicago tr... 134 1e-030
gb|AW692037.2|AW692037 NF046H05ST1F1000 Developing stem Med... 134 1e-030
gb|BI312324.1|BI312324 EST5314074 GESD Medicago truncatula ... 134 1e-030
gb|CA989884.1|CA989884 EST643392 GESD Medicago truncatula c... 134 1e-030
gb|AC150446.8| Medicago truncatula clone mth2-101n14, compl... 134 1e-030
gb|AC140546.11| Medicago truncatula clone mth2-35l19, compl... 134 1e-030
gb|AC146723.24| Medicago truncatula clone mth2-34n4, WORKIN... 129 5e-029
gb|CX542093.1|CX542093 s13dNF85A12GS097_467494 Germinating ... 120 2e-026
gb|AL368411.1|AL368411 MtBA24C11F1 MtBA Medicago truncatula... 90 4e-026
gb|BI309194.1|BI309194 EST530604 GPOD Medicago truncatula c... 116 3e-025
gb|CA919650.1|CA919650 EST637368 MTUS Medicago truncatula c... 116 3e-025
gb|AC148821.1| Medicago truncatula chromosome 2 clone mth2-... 107 4e-025
gb|AC137522.10| Medicago truncatula clone mth2-9h8, complet... 107 4e-025
emb|CR337706.1| mte1-69I8FM1 BAC end, cultivar Jemalong A17... 107 4e-025
gb|AW775761.1|AW775761 EST334826 DSIL Medicago truncatula c... 111 8e-024
gb|AL380512.1|AL380512 MtBB52H03F1 MtBB Medicago truncatula... 111 8e-024
gb|BF003577.1|BF003577 EST432075 KV1 Medicago truncatula cD... 111 8e-024
gb|AC150787.15| Medicago truncatula clone mth2-171n13, comp... 111 8e-024
gb|AC125473.12| Medicago truncatula clone mth2-8j13, comple... 106 3e-022
gb|AC126014.6| Medicago truncatula clone mth2-18j5, complet... 106 3e-022
gb|AC150978.15| Medicago truncatula clone mth2-66m17, compl... 106 3e-022
gb|AC123593.1| Genomic sequence for Medicago truncatula, cl... 105 5e-022
gb|BF635224.1|BF635224 NF061H04DT1F1043 Drought Medicago tr... 103 4e-021
>gb|AW773919.1|AW773919 EST332905 KV3 Medicago truncatula cDNA clone pKV3-16F23, mRNA
sequence
Length = 525
Score = 142 bits (304), Expect = 7e-033
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 365 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 186
Query: 187 CGLDC 201
CG++C
Sbjct: 185 CGVEC 171
>gb|BI309501.1|BI309501 EST530911 GPOD Medicago truncatula cDNA clone pGPOD-13G5 5' end,
mRNA sequence
Length = 691
Score = 142 bits (304), Expect = 7e-033
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 421 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 242
Query: 187 CGLDC 201
CG++C
Sbjct: 241 CGVEC 227
>gb|BI311546.1|BI311546 EST5313296 GESD Medicago truncatula cDNA clone pGESD13M17 5' end,
mRNA sequence
Length = 811
Score = 142 bits (304), Expect = 7e-033
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 459 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 638
Query: 187 CGLDC 201
CG++C
Sbjct: 639 CGVEC 653
>gb|DW016544.1|DW016544 EST1225505 MTY Medicago truncatula cDNA clone MTYAI54, mRNA
sequence
Length = 787
Score = 142 bits (304), Expect = 7e-033
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 528 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 707
Query: 187 CGLDC 201
CG++C
Sbjct: 708 CGVEC 722
>gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete sequence
Length = 136333
Score = 142 bits (304), Expect = 7e-033
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 99769 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 99590
Query: 187 CGLDC 201
CG++C
Sbjct: 99589 CGVEC 99575
>gb|AL384657.1|AL384657 MtBC23F02R1 MtBC Medicago truncatula cDNA clone MtBC23F02 T7, mRNA
sequence
Length = 544
Score = 141 bits (302), Expect = 1e-032
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP EE
Sbjct: 128 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPKAEE 307
Query: 187 CGLDCN*GMSAHQL 228
CG++C + H+L
Sbjct: 308 CGINC*TEIKKHRL 349
>gb|CA918394.1|CA918394 EST642541 GESD Medicago truncatula cDNA clone GESD-21C15, mRNA
sequence
Length = 830
Score = 141 bits (302), Expect = 1e-032
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP EE
Sbjct: 374 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPKAEE 195
Query: 187 CGLDCN*GMSAHQL 228
CG++C + H+L
Sbjct: 194 CGINC*TEIKKHRL 153
>gb|CA919282.1|CA919282 EST637000 MTUS Medicago truncatula cDNA clone MTUS-11D5, mRNA
sequence
Length = 735
Score = 141 bits (302), Expect = 1e-032
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP EE
Sbjct: 353 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPKAEE 174
Query: 187 CGLDCN*GMSAHQL 228
CG++C + H+L
Sbjct: 173 CGINC*TEIKKHRL 132
>gb|BF638502.1|BF638502 NF060B02PL1F1015 Phosphate starved leaf Medicago truncatula cDNA
clone NF060B02PL 5', mRNA sequence
Length = 480
Score = 140 bits (301), Expect = 2e-032
Identities = 52/65 (80%), Positives = 61/65 (93%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WSILLASIFSL+WVRIDPFL K GP+L++
Sbjct: 203 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQ 382
Query: 187 CGLDC 201
CG+ C
Sbjct: 383 CGVXC 397
>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3,
complete sequence
Length = 122591
Score = 140 bits (301), Expect = 2e-032
Identities = 53/66 (80%), Positives = 60/66 (90%)
Frame = +1 / +2
Query: 10 FAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEEC 189
F+FWVIVHL+PFLKG+ GR NRTPTIV+VWSILLAS FS+LWV+IDPFL K GP+LEEC
Sbjct: 40382 FSFWVIVHLFPFLKGMTGRNNRTPTIVLVWSILLASFFSVLWVKIDPFLPKSTGPILEEC 40561
Query: 190 GLDCN* 207
GLDCN*
Sbjct: 40562 GLDCN* 40579
>gb|AJ500002.1|AJ500002 AJ500002 MTGIM Medicago truncatula cDNA clone mtgmacc120011c12,
mRNA sequence
Length = 596
Score = 140 bits (300), Expect = 2e-032
Identities = 51/65 (78%), Positives = 61/65 (93%)
Frame = +1 / -3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WSILL SIFSL+WVRIDPFL K GP+L++
Sbjct: 378 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLVSIFSLIWVRIDPFLPKQTGPILKQ 199
Query: 187 CGLDC 201
CG++C
Sbjct: 198 CGVEC 184
>gb|AJ499635.1|AJ499635 AJ499635 MTGIM Medicago truncatula cDNA clone mtgmacc120006f01,
mRNA sequence
Length = 572
Score = 140 bits (300), Expect = 2e-032
Identities = 51/65 (78%), Positives = 61/65 (93%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+G+QNRTPTIV++WSILL SIFSL+WVRIDPFL K GP+L++
Sbjct: 374 FFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLVSIFSLIWVRIDPFLPKQTGPILKQ 195
Query: 187 CGLDC 201
CG++C
Sbjct: 194 CGVEC 180
>gb|BG648585.1|BG648585 EST510204 HOGA Medicago truncatula cDNA clone pHOGA-23O7 5' end,
mRNA sequence
Length = 788
Score = 139 bits (299), Expect = 3e-032
Identities = 53/65 (81%), Positives = 59/65 (90%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVIVHLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVR+DPF + GP EE
Sbjct: 511 FFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPKAEE 690
Query: 187 CGLDC 201
CG++C
Sbjct: 691 CGINC 705
>gb|AW773746.1|AW773746 EST332732 KV3 Medicago truncatula cDNA clone pKV3-15B20, mRNA
sequence
Length = 538
Score = 136 bits (291), Expect = 4e-031
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVRIDPF + GP E
Sbjct: 504 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKSEM 325
Query: 187 CGLDC 201
CG++C
Sbjct: 324 CGINC 310
>gb|AW776296.1|AW776296 EST335361 DSIL Medicago truncatula cDNA clone pDSIL-7K4, mRNA
sequence
Length = 511
Score = 136 bits (291), Expect = 4e-031
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVRIDPF + GP E
Sbjct: 121 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKSEM 300
Query: 187 CGLDC 201
CG++C
Sbjct: 301 CGINC 315
>gb|BG453782.1|BG453782 NF094A06LF1F1038 Developing leaf Medicago truncatula cDNA clone
NF094A06LF 5', mRNA sequence
Length = 639
Score = 136 bits (291), Expect = 4e-031
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVRIDPF + GP E
Sbjct: 108 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKSEM 287
Query: 187 CGLDC 201
CG++C
Sbjct: 288 CGINC 302
>gb|AC149572.14| Medicago truncatula clone mth2-116e22, complete sequence
Length = 120017
Score = 136 bits (291), Expect = 4e-031
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVRIDPF + GP E
Sbjct: 93652 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKSEM 93831
Query: 187 CGLDC 201
CG++C
Sbjct: 93832 CGINC 93846
>emb|CT009508.6| M.truncatula DNA sequence from clone MTH2-76H16 on chromosome 3, complete
sequence
Length = 133910
Score = 136 bits (291), Expect = 4e-031
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFLKGL+GRQNRTPTIV+VWSILLASIFSLLWVRIDPF + GP E
Sbjct: 129630 FFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKSEM 129809
Query: 187 CGLDC 201
CG++C
Sbjct: 129810 CGINC 129824
>gb|AW736522.1|AW736522 EST332536 KV3 Medicago truncatula cDNA clone pKV3-13H14, mRNA
sequence
Length = 551
Score = 134 bits (287), Expect = 1e-030
Identities = 51/65 (78%), Positives = 58/65 (89%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI+HLYPFL+GL+GRQNRTPTIV+VWSILLASIFSLLWVRIDPF + GP E
Sbjct: 421 FFAFWVIIHLYPFLEGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPKSEM 242
Query: 187 CGLDC 201
CG++C
Sbjct: 241 CGINC 227
>gb|AW329632.2|AW329632 N200892e rootphos(-) Medicago truncatula cDNA clone MHRP-22D5, mRNA
sequence
Length = 495
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 249 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 428
Query: 187 CGLDC 201
CG++C
Sbjct: 429 CGINC 443
>gb|AL365795.1|AL365795 MtBA02D11R2 MtBA Medicago truncatula cDNA clone MtBA02D11 T7, mRNA
sequence
Length = 557
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 111 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 290
Query: 187 CGLDC 201
CG++C
Sbjct: 291 CGINC 305
>gb|AL385965.1|AL385965 MtBC31G07R1 MtBC Medicago truncatula cDNA clone MtBC31G07 T7, mRNA
sequence
Length = 477
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 23 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 202
Query: 187 CGLDC 201
CG++C
Sbjct: 203 CGINC 217
>gb|BF634847.1|BF634847 NF075E01DT1F1005 Drought Medicago truncatula cDNA clone NF075E01DT
5', mRNA sequence
Length = 680
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 179 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 358
Query: 187 CGLDC 201
CG++C
Sbjct: 359 CGINC 373
>gb|AW692037.2|AW692037 NF046H05ST1F1000 Developing stem Medicago truncatula cDNA clone
NF046H05ST 5', mRNA sequence
Length = 592
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 357 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 536
Query: 187 CGLDC 201
CG++C
Sbjct: 537 CGINC 551
>gb|BI312324.1|BI312324 EST5314074 GESD Medicago truncatula cDNA clone pGESD17P11 5' end,
mRNA sequence
Length = 711
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 516 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 695
Query: 187 CGLDC 201
CG++C
Sbjct: 696 CGINC 710
>gb|CA989884.1|CA989884 EST643392 GESD Medicago truncatula cDNA clone GESD-21H19, mRNA
sequence
Length = 842
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 451 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 630
Query: 187 CGLDC 201
CG++C
Sbjct: 631 CGINC 645
>gb|AC150446.8| Medicago truncatula clone mth2-101n14, complete sequence
Length = 109162
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 107031 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 107210
Query: 187 CGLDC 201
CG++C
Sbjct: 107211 CGINC 107225
>gb|AC140546.11| Medicago truncatula clone mth2-35l19, complete sequence
Length = 106963
Score = 134 bits (287), Expect = 1e-030
Identities = 50/65 (76%), Positives = 59/65 (90%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ K GP +
Sbjct: 31244 FFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMKTKGPDTKL 31423
Query: 187 CGLDC 201
CG++C
Sbjct: 31424 CGINC 31438
>gb|AC146723.24| Medicago truncatula clone mth2-34n4, WORKING DRAFT SEQUENCE, 3 ordered
pieces
Length = 121085
Score = 129 bits (276), Expect = 5e-029
Identities = 46/65 (70%), Positives = 58/65 (89%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+ WVI HLYPFLKGL+GRQNRTPT+V++WS+LLASIFSL+WVRIDPF+ K GP +++
Sbjct: 54748 FFSSWVIAHLYPFLKGLMGRQNRTPTLVVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQ 54927
Query: 187 CGLDC 201
CG+ C
Sbjct: 54928 CGISC 54942
>gb|CX542093.1|CX542093 s13dNF85A12GS097_467494 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 617
Score = 120 bits (257), Expect = 2e-026
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FF+FWVIVHLYPFL GL+GRQNRTPTIV++WS+LLASIFSLLWVRIDPF+ GP +
Sbjct: 435 FFSFWVIVHLYPFLXGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVMXTKGPDTKL 614
Query: 187 C 189
C
Sbjct: 615 C 617
>gb|AL368411.1|AL368411 MtBA24C11F1 MtBA Medicago truncatula cDNA clone MtBA24C11 T3, mRNA
sequence
Length = 526
Score = 90.0 bits (190), Expect(2) = 4e-026
Identities = 35/52 (67%), Positives = 44/52 (84%)
Frame = +1 / -1
Query: 46 LKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 201
LK +G+ RTPTIV++WSILLASIFSL+WVRIDPFL K GP+L+ CG++C
Sbjct: 484 LKVFMGKLYRTPTIVVLWSILLASIFSLIWVRIDPFLPKLTGPILKLCGVEC 329
Score = 49.2 bits (101), Expect(2) = 4e-026
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / -3
Query: 7 FFAFWVIVHLYPFLKGLVGR 66
FFAFWVIVHLYPFLKGL G+
Sbjct: 524 FFAFWVIVHLYPFLKGLHGK 465
>gb|BI309194.1|BI309194 EST530604 GPOD Medicago truncatula cDNA clone pGPOD-11A9 5' end,
mRNA sequence
Length = 625
Score = 116 bits (249), Expect = 3e-025
Identities = 43/60 (71%), Positives = 54/60 (90%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI HLYPFLKGL+GRQNRTPTIVI+WS+LLAS+FSL+WV+I+PF++K D + +
Sbjct: 404 FFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLIWVKINPFVSKVDSSAISQ 583
>gb|CA919650.1|CA919650 EST637368 MTUS Medicago truncatula cDNA clone MTUS-16B10, mRNA
sequence
Length = 801
Score = 116 bits (249), Expect = 3e-025
Identities = 43/60 (71%), Positives = 54/60 (90%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEE 186
FFAFWVI HLYPFLKGL+GRQNRTPTIVI+WS+LLAS+FSL+WV+I+PF++K D + +
Sbjct: 434 FFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLIWVKINPFVSKVDSSAISQ 255
>gb|AC148821.1| Medicago truncatula chromosome 2 clone mth2-80k8, *** SEQUENCING IN
PROGRESS ***, 2 ordered pieces
Length = 122271
Score = 107 bits (229), Expect(2) = 4e-025
Identities = 39/53 (73%), Positives = 50/53 (94%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKD 165
FFA WVI+HLYPFLKGL+G+Q+R PTIV+VWSILLASI +LLWVR++PF+++D
Sbjct: 112233 FFALWVIIHLYPFLKGLLGKQDRMPTIVLVWSILLASILTLLWVRVNPFVSRD 112391
Score = 28.1 bits (55), Expect(2) = 4e-025
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 166 DGPLLEECGLDC 201
DGP+LE CGL+C
Sbjct: 112389 DGPVLEICGLNC 112424
>gb|AC137522.10| Medicago truncatula clone mth2-9h8, complete sequence
Length = 117716
Score = 107 bits (229), Expect(2) = 4e-025
Identities = 39/53 (73%), Positives = 50/53 (94%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKD 165
FFA WVI+HLYPFLKGL+G+Q+R PTIV+VWSILLASI +LLWVR++PF+++D
Sbjct: 93470 FFALWVIIHLYPFLKGLLGKQDRMPTIVLVWSILLASILTLLWVRVNPFVSRD 93312
Score = 28.1 bits (55), Expect(2) = 4e-025
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 166 DGPLLEECGLDC 201
DGP+LE CGL+C
Sbjct: 93314 DGPVLEICGLNC 93279
>emb|CR337706.1| mte1-69I8FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 629
Score = 107 bits (229), Expect(2) = 4e-025
Identities = 39/53 (73%), Positives = 50/53 (94%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKD 165
FFA WVI+HLYPFLKGL+G+Q+R PTIV+VWSILLASI +LLWVR++PF+++D
Sbjct: 161 FFALWVIIHLYPFLKGLLGKQDRMPTIVLVWSILLASILTLLWVRVNPFVSRD 319
Score = 28.1 bits (55), Expect(2) = 4e-025
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 166 DGPLLEECGLDC 201
DGP+LE CGL+C
Sbjct: 317 DGPVLEICGLNC 352
>gb|AW775761.1|AW775761 EST334826 DSIL Medicago truncatula cDNA clone pDSIL-3G5, mRNA
sequence
Length = 701
Score = 111 bits (238), Expect = 8e-024
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 159
FFA WVI HLYPFLKGL+G+ NRTPTIVIVW++LLASIFSLLWVRIDPF++
Sbjct: 308 FFAIWVIAHLYPFLKGLLGKSNRTPTIVIVWAVLLASIFSLLWVRIDPFIS 460
>gb|AL380512.1|AL380512 MtBB52H03F1 MtBB Medicago truncatula cDNA clone MtBB52H03 T3, mRNA
sequence
Length = 379
Score = 111 bits (238), Expect = 8e-024
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 159
FFA WVI HLYPFLKGL+G+ NRTPTIVIVW++LLASIFSLLWVRIDPF++
Sbjct: 29 FFAIWVIAHLYPFLKGLLGKSNRTPTIVIVWAVLLASIFSLLWVRIDPFIS 181
>gb|BF003577.1|BF003577 EST432075 KV1 Medicago truncatula cDNA clone pKV1-7H6, mRNA
sequence
Length = 550
Score = 111 bits (238), Expect = 8e-024
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +1 / -3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 159
FFA WVI HLYPFLKGL+G+ NRTPTIVIVW++LLASIFSLLWVRIDPF++
Sbjct: 386 FFAIWVIAHLYPFLKGLLGKSNRTPTIVIVWAVLLASIFSLLWVRIDPFIS 234
>gb|AC150787.15| Medicago truncatula clone mth2-171n13, complete sequence
Length = 82665
Score = 111 bits (238), Expect = 8e-024
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +1 / -2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 159
FFA WVI HLYPFLKGL+G+ NRTPTIVIVW++LLASIFSLLWVRIDPF++
Sbjct: 48758 FFAIWVIAHLYPFLKGLLGKSNRTPTIVIVWAVLLASIFSLLWVRIDPFIS 48606
>gb|AC125473.12| Medicago truncatula clone mth2-8j13, complete sequence
Length = 103966
Score = 106 bits (227), Expect = 3e-022
Identities = 39/54 (72%), Positives = 50/54 (92%)
Frame = +1 / -1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDD 168
FFA WVI+HLYPFLKG++G+Q PTI++VW+ILLASIFSLLWVRI+PF++K+D
Sbjct: 8200 FFALWVILHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWVRINPFVSKND 8039
>gb|AC126014.6| Medicago truncatula clone mth2-18j5, complete sequence
Length = 113200
Score = 106 bits (227), Expect = 3e-022
Identities = 39/54 (72%), Positives = 50/54 (92%)
Frame = +1 / +2
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDD 168
FFA WVI+HLYPFLKG++G+Q PTI++VW+ILLASIFSLLWVRI+PF++K+D
Sbjct: 91439 FFALWVILHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWVRINPFVSKND 91600
>gb|AC150978.15| Medicago truncatula clone mth2-66m17, complete sequence
Length = 125121
Score = 106 bits (227), Expect = 3e-022
Identities = 39/54 (72%), Positives = 50/54 (92%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDD 168
FFA WVI+HLYPFLKG++G+Q PTI++VW+ILLASIFSLLWVRI+PF++K+D
Sbjct: 1159 FFALWVILHLYPFLKGVMGKQEGVPTIILVWAILLASIFSLLWVRINPFVSKND 1320
>gb|AC123593.1| Genomic sequence for Medicago truncatula, clone MTABa0052G10,
complete sequence
Length = 100769
Score = 105 bits (225), Expect = 5e-022
Identities = 40/51 (78%), Positives = 46/51 (90%)
Frame = +1 / +3
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 159
FFA WVI HLYPFLKGL+G+ NRT T+VIVW +LLASIFSLLWVRIDPF++
Sbjct: 5205 FFAIWVIAHLYPFLKGLLGKSNRTRTVVIVWVVLLASIFSLLWVRIDPFIS 5357
>gb|BF635224.1|BF635224 NF061H04DT1F1043 Drought Medicago truncatula cDNA clone NF061H04DT
5', mRNA sequence
Length = 668
Score = 103 bits (219), Expect = 4e-021
Identities = 38/45 (84%), Positives = 44/45 (97%)
Frame = +1 / +1
Query: 7 FFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVR 141
FFAFWVI HLYPFLKGL+GRQNRTPTIVI+WS+LLAS+FSL+WV+
Sbjct: 532 FFAFWVIFHLYPFLKGLMGRQNRTPTIVILWSVLLASVFSLIWVK 666
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 785,679,715
Number of Sequences: 392609
Number of extensions: 12321903
Number of successful extensions: 67344
Number of sequences better than 1.0e-020: 51
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 21301342205
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)