TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1724818.2.1
(1089 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CG973927.1|CG973927 MBEMP53TF mth2 Medicago truncatula g... 135 8e-071
gb|CG930935.1|CG930935 MBELI83TR mth2 Medicago truncatula g... 135 8e-071
gb|CG966126.1|CG966126 MBEGT01TR mth2 Medicago truncatula g... 135 8e-071
gb|CG973484.1|CG973484 MBEDF62TRC mth2 Medicago truncatula ... 166 3e-070
gb|CG954988.1|CG954988 MBEMP69TR mth2 Medicago truncatula g... 135 5e-070
gb|AC139842.16| Medicago truncatula clone mth2-6b10, WORKIN... 133 8e-064
gb|CG961547.1|CG961547 MBEIS70TF mth2 Medicago truncatula g... 133 9e-064
gb|AC149269.11| Medicago truncatula clone mth2-102b19, comp... 207 6e-059
gb|DW018366.1|DW018366 EST1227327 MTY Medicago truncatula c... 152 2e-053
gb|AC157980.11| Medicago truncatula clone mth2-170b10, WORK... 182 5e-051
gb|AC157980.12| Medicago truncatula clone mth2-170b10, WORK... 182 5e-051
gb|AC150207.2| Medicago truncatula chromosome 2 BAC clone m... 182 5e-051
gb|AC148098.3| Medicago truncatula clone mth2-15b16, comple... 182 5e-051
gb|AW696792.1|AW696792 NF109A05ST1F1036 Developing stem Med... 127 3e-043
emb|CR967438.1| mth4-36F5RM1 BAC end, cultivar Jemalong A17... 130 9e-040
gb|BF638921.1|BF638921 NF062F12PL1F1101 Phosphate starved l... 165 1e-039
gb|BG449572.1|BG449572 NF054A09IN1F1067 Insect herbivory Me... 165 1e-039
gb|AC148469.12| Medicago truncatula clone mth2-11b3, WORKIN... 165 1e-039
emb|CR299912.1| mte1-18A19RM1 BAC end, cultivar Jemalong A1... 159 7e-038
emb|CR496597.1| mth2-172A18RM2 BAC end, cultivar Jemalong A... 126 2e-036
gb|CX527797.1|CX527797 s13dNF47E02AT019_516106 Aphid-Infect... 154 3e-036
gb|AW694785.2|AW694785 NF079H10ST1F1091 Developing stem Med... 137 3e-031
emb|CR491864.1| mth2-165M24FM1 BAC end, cultivar Jemalong A... 71 4e-031
gb|BQ157179.1|BQ157179 NF102A09IR1F1069 Irradiated Medicago... 128 6e-030
emb|CR497223.1| mth2-173I21RM1 BAC end, cultivar Jemalong A... 69 2e-029
gb|BG455228.1|BG455228 NF051B11PL1F1090 Phosphate starved l... 116 1e-027
gb|AW694180.1|AW694180 NF073E09ST1F1070 Developing stem Med... 100 3e-027
gb|AL389835.1|AL389835 MtBC57G04F1 MtBC Medicago truncatula... 122 1e-026
gb|CX527751.1|CX527751 s13dNF38H12AT104_516014 Aphid-Infect... 106 1e-024
gb|BQ165102.1|BQ165102 EST610971 KVKC Medicago truncatula c... 68 3e-024
gb|BF004880.1|BF004880 EST433441 DSLC Medicago truncatula c... 108 4e-024
gb|AW256747.1|AW256747 EST304884 KV2 Medicago truncatula cD... 105 4e-024
gb|BG449964.1|BG449964 NF012A02DT1F1017 Drought Medicago tr... 111 3e-023
gb|CX527940.1|CX527940 s13dNF50A06AT049_516392 Aphid-Infect... 100 9e-023
gb|CX528230.1|CX528230 s13dNF53B08AT073_516972 Aphid-Infect... 100 9e-023
gb|CX528337.1|CX528337 s13dNF54C11AT086_517186 Aphid-Infect... 100 9e-023
gb|CX527184.1|CX527184 s13dNF40H03AT032_514880 Aphid-Infect... 100 2e-022
gb|BE124210.1|BE124210 EST394335 DSIL Medicago truncatula c... 99 2e-022
gb|BI268400.1|BI268400 NF120F08IN1F1075 Insect herbivory Me... 100 2e-021
>gb|CG973927.1|CG973927 MBEMP53TF mth2 Medicago truncatula genomic clone 3J10, DNA sequence
Length = 891
Score = 135 bits (289), Expect(5) = 8e-071
Identities = 53/87 (60%), Positives = 66/87 (75%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNNRF G FP VVL+LP L++LD+RFN+FEG +P LFD+ LDAI +N NR +P NL
Sbjct: 287 SNNRFAGKFPKVVLSLPVLKFLDIRFNEFEGTVPKELFDKDLDAIFINDNRFAFDLPENL 466
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMA 776
GNSP SV+V A+N+ GCIP SIG M+
Sbjct: 467 GNSPVSVVVFANNKFKGCIPSSIGNMS 547
Score = 88.1 bits (186), Expect(5) = 8e-071
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +3 / +2
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNL 956
+ LNEI +++ C+P ++GLL LTVFDV N L GPLP A+GG L++LNVA N+
Sbjct: 545 SNLNEINFLNNLFKSCLPSEIGLLKNLTVFDVGFNQLVGPLPAAIGGAVSLEELNVAHNM 724
Query: 957 LRGPVPSAVC 986
G +PS++C
Sbjct: 725 FSGKIPSSIC 754
Score = 58.3 bits (121), Expect(5) = 8e-071
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCA 324
+ AI SDP NFT+NW G NVC+Y GIYCA
Sbjct: 8 KQAILSDPLNFTTNWVGSNVCSYTGIYCA 94
Score = 35.0 bits (70), Expect(5) = 8e-071
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 423 DLALLHLNSNRFCG 464
DLAL H+NSNRFCG
Sbjct: 194 DLALFHINSNRFCG 235
Score = 28.1 bits (55), Expect(5) = 8e-071
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 369 NHADIAGHIPADLPL 413
NHADIAG++P +L L
Sbjct: 143 NHADIAGYLPDELGL 187
>gb|CG930935.1|CG930935 MBELI83TR mth2 Medicago truncatula genomic clone 80M21, DNA
sequence
Length = 885
Score = 135 bits (289), Expect(5) = 8e-071
Identities = 53/87 (60%), Positives = 66/87 (75%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNNRF G FP VVL+LP L++LD+RFN+FEG +P LFD+ LDAI +N NR +P NL
Sbjct: 282 SNNRFAGKFPKVVLSLPVLKFLDIRFNEFEGTVPKELFDKDLDAIFINDNRFAFDLPENL 461
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMA 776
GNSP SV+V A+N+ GCIP SIG M+
Sbjct: 462 GNSPVSVVVFANNKFKGCIPSSIGNMS 542
Score = 88.1 bits (186), Expect(5) = 8e-071
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +3 / +3
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNL 956
+ LNEI +++ C+P ++GLL LTVFDV N L GPLP A+GG L++LNVA N+
Sbjct: 540 SNLNEINFLNNLFKSCLPSEIGLLKNLTVFDVGFNQLVGPLPAAIGGAVSLEELNVAHNM 719
Query: 957 LRGPVPSAVC 986
G +PS++C
Sbjct: 720 FSGKIPSSIC 749
Score = 58.3 bits (121), Expect(5) = 8e-071
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCA 324
+ AI SDP NFT+NW G NVC+Y GIYCA
Sbjct: 3 KQAILSDPLNFTTNWVGSNVCSYTGIYCA 89
Score = 35.0 bits (70), Expect(5) = 8e-071
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 423 DLALLHLNSNRFCG 464
DLAL H+NSNRFCG
Sbjct: 189 DLALFHINSNRFCG 230
Score = 28.1 bits (55), Expect(5) = 8e-071
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 369 NHADIAGHIPADLPL 413
NHADIAG++P +L L
Sbjct: 138 NHADIAGYLPDELGL 182
>gb|CG966126.1|CG966126 MBEGT01TR mth2 Medicago truncatula genomic clone 52B2, DNA sequence
Length = 822
Score = 135 bits (289), Expect(5) = 8e-071
Identities = 53/87 (60%), Positives = 66/87 (75%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNNRF G FP VVL+LP L++LD+RFN+FEG +P LFD+ LDAI +N NR +P NL
Sbjct: 282 SNNRFAGKFPKVVLSLPVLKFLDIRFNEFEGTVPKELFDKDLDAIFINDNRFAFDLPENL 461
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMA 776
GNSP SV+V A+N+ GCIP SIG M+
Sbjct: 462 GNSPVSVVVFANNKFKGCIPSSIGNMS 542
Score = 88.1 bits (186), Expect(5) = 8e-071
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +3 / +3
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNL 956
+ LNEI +++ C+P ++GLL LTVFDV N L GPLP A+GG L++LNVA N+
Sbjct: 540 SNLNEINFLNNLFKSCLPSEIGLLKNLTVFDVGFNQLVGPLPAAIGGAVSLEELNVAHNM 719
Query: 957 LRGPVPSAVC 986
G +PS++C
Sbjct: 720 FSGKIPSSIC 749
Score = 58.3 bits (121), Expect(5) = 8e-071
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCA 324
+ AI SDP NFT+NW G NVC+Y GIYCA
Sbjct: 3 KQAILSDPLNFTTNWVGSNVCSYTGIYCA 89
Score = 35.0 bits (70), Expect(5) = 8e-071
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 423 DLALLHLNSNRFCG 464
DLAL H+NSNRFCG
Sbjct: 189 DLALFHINSNRFCG 230
Score = 28.1 bits (55), Expect(5) = 8e-071
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +3
Query: 369 NHADIAGHIPADLPL 413
NHADIAG++P +L L
Sbjct: 138 NHADIAGYLPDELGL 182
>gb|CG973484.1|CG973484 MBEDF62TRC mth2 Medicago truncatula genomic clone 31K4, DNA
sequence
Length = 909
Score = 166 bits (357), Expect(4) = 3e-070
Identities = 65/117 (55%), Positives = 84/117 (71%)
Frame = +3 / -1
Query: 423 DLALLHLNSNRFCGVXXXXXXXXXXXXXXXXSNNRFVGAFPAVVLALPSLRYLDLRFNDF 602
D+ALLH+NSNRFCGV SNNRFVG FP VL++P ++++D+RFN+F
Sbjct: 528 DIALLHINSNRFCGVLPKSFSKLKLLHELDISNNRFVGKFPCHVLSIPDIKFIDIRFNEF 349
Query: 603 EGPIPPPLFDRPLDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRM 773
EG IPP LF++ LDAI +N+NR IP N+GNSPASV+V A+N + GCIP SIG+M
Sbjct: 348 EGEIPPELFNKTLDAIFINNNRFTSTIPENMGNSPASVIVFANNGISGCIPSSIGQM 178
Score = 69.3 bits (145), Expect(4) = 3e-070
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +1 / -1
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCAPRPSDGALAV 354
+ AI+SDP+NFTSNW GPNVC+YNGI+CA +D + V
Sbjct: 714 KKAIYSDPTNFTSNWEGPNVCSYNGIFCAASLNDSKIQV 598
Score = 62.9 bits (131), Expect(4) = 3e-070
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +3 / -1
Query: 756 PSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQ 935
PS LNE V+I ++LTGC+P +G L +L VFDVS N G LP + G++ ++
Sbjct: 198 PSSIGQMKNLNEFVVIGNNLTGCLPEDIGKLQQLAVFDVSENLFVGALPKTLQGLSEVEV 19
Query: 936 LNVAGN 953
+++A N
Sbjct: 18 ISIAHN 1
Score = 26.3 bits (51), Expect(4) = 3e-070
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -1
Query: 369 NHADIAGHIPADLPL 413
N ADIAG+IPA+ L
Sbjct: 579 NQADIAGYIPAEFGL 535
>gb|CG954988.1|CG954988 MBEMP69TR mth2 Medicago truncatula genomic clone 3L18, DNA sequence
Length = 943
Score = 135 bits (289), Expect(5) = 5e-070
Identities = 53/87 (60%), Positives = 66/87 (75%)
Frame = +3 / -3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNNRF G FP VVL+LP L++LD+RFN+FEG +P LFD+ LDAI +N NR +P NL
Sbjct: 656 SNNRFAGKFPKVVLSLPVLKFLDIRFNEFEGTVPKELFDKDLDAIFINDNRFAFDLPENL 477
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMA 776
GNSP SV+V A+N+ GCIP SIG M+
Sbjct: 476 GNSPVSVVVFANNKFKGCIPSSIGNMS 396
Score = 88.1 bits (186), Expect(5) = 5e-070
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +3 / -3
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNL 956
+ LNEI +++ C+P ++GLL LTVFDV N L GPLP A+GG L++LNVA N+
Sbjct: 398 SNLNEINFLNNLFKSCLPSEIGLLKNLTVFDVGFNQLVGPLPAAIGGAVSLEELNVAHNM 219
Query: 957 LRGPVPSAVC 986
G +PS++C
Sbjct: 218 FSGKIPSSIC 189
Score = 55.6 bits (115), Expect(5) = 5e-070
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1 / -3
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCA 324
+ AI SDP FT+NW G NVC+Y GIYCA
Sbjct: 935 KQAILSDPLTFTTNWVGSNVCSYTGIYCA 849
Score = 35.0 bits (70), Expect(5) = 5e-070
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -3
Query: 423 DLALLHLNSNRFCG 464
DLAL H+NSNRFCG
Sbjct: 749 DLALFHINSNRFCG 708
Score = 28.1 bits (55), Expect(5) = 5e-070
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / -3
Query: 369 NHADIAGHIPADLPL 413
NHADIAG++P +L L
Sbjct: 800 NHADIAGYLPDELGL 756
>gb|AC139842.16| Medicago truncatula clone mth2-6b10, WORKING DRAFT SEQUENCE, 4
unordered pieces
Length = 151398
Score = 133 bits (284), Expect(5) = 8e-064
Identities = 53/86 (61%), Positives = 63/86 (73%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNNRF G FP VVL LP L++LDLRFN+FEG +P LFD+ LDAI +N NR +P N
Sbjct: 40364 SNNRFAGKFPEVVLRLPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFVFNLPENF 40543
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRM 773
GNSP SV+VLA+NR GC+P IG M
Sbjct: 40544 GNSPVSVIVLANNRFHGCLPAGIGNM 40621
Score = 80.8 bits (170), Expect(5) = 8e-064
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +3 / +2
Query: 783 LNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNLLR 962
LNEI+ +++ C+P +VGLL LTVFDVS N GPLP G L+ LNVA N L
Sbjct: 40628 LNEIIAMNNGFQACLPEEVGLLKNLTVFDVSFNKFLGPLPEKYGNAVGLEVLNVAHNYLS 40807
Query: 963 GPVPSAVC 986
G +P+++C
Sbjct: 40808 GQIPASIC 40831
Score = 47.3 bits (97), Expect(5) = 8e-064
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCAP 327
+ AI SDP N T +W G +VC+Y ++CAP
Sbjct: 40085 KQAILSDPRNCTVDWVGSDVCSYTNVFCAP 40174
Score = 33.1 bits (66), Expect(5) = 8e-064
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 423 DLALLHLNSNRFCG 464
DLAL H+N+NRFCG
Sbjct: 40271 DLALFHVNTNRFCG 40312
Score = 26.7 bits (52), Expect(5) = 8e-064
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 369 NHADIAGHIPADLPL 413
NH DIAG++P +L L
Sbjct: 40220 NHCDIAGYLPEELGL 40264
>gb|CG961547.1|CG961547 MBEIS70TF mth2 Medicago truncatula genomic clone 64L19, DNA
sequence
Length = 891
Score = 133 bits (284), Expect(5) = 9e-064
Identities = 53/86 (61%), Positives = 63/86 (73%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNNRF G FP VVL LP L++LDLRFN+FEG +P LFD+ LDAI +N NR +P N
Sbjct: 287 SNNRFAGKFPEVVLRLPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFVFNLPENF 466
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRM 773
GNSP SV+VLA+NR GC+P IG M
Sbjct: 467 GNSPVSVIVLANNRFHGCLPAGIGNM 544
Score = 80.8 bits (170), Expect(5) = 9e-064
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +3 / +2
Query: 783 LNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNLLR 962
LNEI+ +++ C+P +VGLL LTVFDVS N GPLP G L+ LNVA N L
Sbjct: 551 LNEIIAMNNGFQACLPEEVGLLKNLTVFDVSFNKFLGPLPEKYGNAVGLEVLNVAHNYLS 730
Query: 963 GPVPSAVC 986
G +P+++C
Sbjct: 731 GQIPASIC 754
Score = 47.3 bits (97), Expect(5) = 9e-064
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1 / +2
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCAP 327
+ AI SDP N T +W G +VC+Y ++CAP
Sbjct: 8 KQAILSDPRNCTVDWVGSDVCSYTNVFCAP 97
Score = 33.1 bits (66), Expect(5) = 9e-064
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 423 DLALLHLNSNRFCG 464
DLAL H+N+NRFCG
Sbjct: 194 DLALFHVNTNRFCG 235
Score = 26.7 bits (52), Expect(5) = 9e-064
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 369 NHADIAGHIPADLPL 413
NH DIAG++P +L L
Sbjct: 143 NHCDIAGYLPEELGL 187
>gb|AC149269.11| Medicago truncatula clone mth2-102b19, complete sequence
Length = 128294
Score = 207 bits (446), Expect(2) = 6e-059
Identities = 89/188 (47%), Positives = 118/188 (62%)
Frame = +3 / -3
Query: 423 DLALLHLNSNRFCGVXXXXXXXXXXXXXXXXSNNRFVGAFPAVVLALPSLRYLDLRFNDF 602
D++LLHLNSNRF G SNN+ G+FP V L +PSL YLD+RFN F
Sbjct: 44181 DMSLLHLNSNRFSGTVPETFKDLVSLQELDLSNNQLSGSFPLVTLYMPSLIYLDIRFNSF 44002
Query: 603 EGPIPPPLFDRPLDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRMAAT 782
G +P LF++ LDAI LN+N G IP NLGNSPASV+ LA+N+L G IP S G M +
Sbjct: 44001 SGSLPQELFNKNLDAIFLNNNEFEGEIPTNLGNSPASVINLANNKLSGNIPASFGFMGSK 43822
Query: 783 LNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNLLR 962
+ EI+ +++ LTGC+P VGL T++ V DVS N L G LP + + ++ LN+A N L
Sbjct: 43821 IKEILFLNNQLTGCIPEGVGLFTEMEVLDVSFNSLMGHLPDTLSCLQNIEVLNLAHNQLS 43642
Query: 963 GPVPSAVC 986
G + +C
Sbjct: 43641 GELSDIIC 43618
Score = 42.8 bits (87), Expect(2) = 6e-059
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1 / -3
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCA 324
++AI DP +W G NVC+Y GI+CA
Sbjct: 44385 KSAITDDPLKILDSWNGSNVCSYKGIFCA 44299
>gb|DW018366.1|DW018366 EST1227327 MTY Medicago truncatula cDNA clone MTYB570, mRNA
sequence
Length = 812
Score = 152 bits (327), Expect(4) = 2e-053
Identities = 62/107 (57%), Positives = 75/107 (70%)
Frame = +3 / +3
Query: 423 DLALLHLNSNRFCGVXXXXXXXXXXXXXXXXSNNRFVGAFPAVVLALPSLRYLDLRFNDF 602
DL+LLHLNSNRFCG+ SNNRFVG FP+VVL+LPSL YLDLR+N+F
Sbjct: 417 DLSLLHLNSNRFCGIIPKTFSNLTHLYELDLSNNRFVGPFPSVVLSLPSLTYLDLRYNEF 596
Query: 603 EGPIPPPLFDRPLDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLG 743
EGP+PP LF++ DA LN+NR IP NLG S ASV+V A+N+ G
Sbjct: 597 EGPLPPELFNKAFDAFFLNNNRFTSSIPRNLGKSKASVMVFANNKFG 737
Score = 62.5 bits (130), Expect(4) = 2e-053
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +1 / +3
Query: 247 IFSDPSNFTSNWAGPNVCAYNGIYCAPRPSDGALAV 354
I+SDP N TSNW GP+VC Y GIYCAP D + V
Sbjct: 240 IYSDPKNITSNWVGPSVCNYTGIYCAPSLDDPKITV 347
Score = 27.2 bits (53), Expect(4) = 2e-053
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3 / +1
Query: 738 LGGCIPPSIGRMAATLNEIVL 800
LGGC+P SI A TL L
Sbjct: 733 LGGCLPESIANFANTLGRTSL 795
Score = 25.8 bits (50), Expect(4) = 2e-053
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 369 NHADIAGHIPADL 407
NHADIAG +P +L
Sbjct: 366 NHADIAGFLPDEL 404
>gb|AC157980.11| Medicago truncatula clone mth2-170b10, WORKING DRAFT SEQUENCE, 2
ordered pieces
Length = 128535
Score = 182 bits (393), Expect(2) = 5e-051
Identities = 76/214 (35%), Positives = 118/214 (55%)
Frame = +3 / +1
Query: 417 VPDLALLHLNSNRFCGVXXXXXXXXXXXXXXXXSNNRFVGAFPAVVLALPSLRYLDLRFN 596
+PD+AL H NSN F G SNN+F G FP VL + +L +LD+RFN
Sbjct: 69022 LPDIALFHANSNNFIGTITSQISKLPYLYELDLSNNKFSGPFPMAVLGMNTLTFLDIRFN 69201
Query: 597 DFEGPIPPPLFDRPLDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRMA 776
F G +P +F + L+ + +N+N L +P NL S +L LA+N+ G IP ++ +
Sbjct: 69202 SFSGGVPQQIFTQNLEVLFINNNLLTQNLPDNLATSSIFLLTLANNKFIGSIPRNLPKAL 69381
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNL 956
++L E+VL++++LTGC+P ++G + VFDV N L GPLP ++ + ++ +N+AGN+
Sbjct: 69382 SSLTEVVLLNNELTGCLPHEIGYFQEAVVFDVGNNQLTGPLPMSLSCLEKVEVVNLAGNM 69561
Query: 957 LRGPVPSAVCGXXXXXXXXXXXXXXXXHLVPWVR 1058
G VP VC H+ P+ R
Sbjct: 69562 FYGMVPDFVCAGLENLVNFSLSDNYFTHVGPFCR 69663
Score = 40.5 bits (82), Expect(2) = 5e-051
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1 / +1
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCAPRPSDGA 345
++ I SDP T +W G ++C Y G YC P + +
Sbjct: 68839 KSLITSDPLGVTKSWIGSDICNYKGFYCDHPPDNNS 68946
>gb|AC157980.12| Medicago truncatula clone mth2-170b10, WORKING DRAFT SEQUENCE
Length = 128014
Score = 182 bits (393), Expect(2) = 5e-051
Identities = 76/214 (35%), Positives = 118/214 (55%)
Frame = +3 / +1
Query: 417 VPDLALLHLNSNRFCGVXXXXXXXXXXXXXXXXSNNRFVGAFPAVVLALPSLRYLDLRFN 596
+PD+AL H NSN F G SNN+F G FP VL + +L +LD+RFN
Sbjct: 69022 LPDIALFHANSNNFIGTITSQISKLPYLYELDLSNNKFSGPFPMAVLGMNTLTFLDIRFN 69201
Query: 597 DFEGPIPPPLFDRPLDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRMA 776
F G +P +F + L+ + +N+N L +P NL S +L LA+N+ G IP ++ +
Sbjct: 69202 SFSGGVPQQIFTQNLEVLFINNNLLTQNLPDNLATSSIFLLTLANNKFIGSIPRNLPKAL 69381
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNL 956
++L E+VL++++LTGC+P ++G + VFDV N L GPLP ++ + ++ +N+AGN+
Sbjct: 69382 SSLTEVVLLNNELTGCLPHEIGYFQEAVVFDVGNNQLTGPLPMSLSCLEKVEVVNLAGNM 69561
Query: 957 LRGPVPSAVCGXXXXXXXXXXXXXXXXHLVPWVR 1058
G VP VC H+ P+ R
Sbjct: 69562 FYGMVPDFVCAGLENLVNFSLSDNYFTHVGPFCR 69663
Score = 40.5 bits (82), Expect(2) = 5e-051
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1 / +1
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCAPRPSDGA 345
++ I SDP T +W G ++C Y G YC P + +
Sbjct: 68839 KSLITSDPLGVTKSWIGSDICNYKGFYCDHPPDNNS 68946
>gb|AC150207.2| Medicago truncatula chromosome 2 BAC clone mte1-29a5, complete sequence
Length = 124676
Score = 182 bits (393), Expect(2) = 5e-051
Identities = 76/214 (35%), Positives = 118/214 (55%)
Frame = +3 / -1
Query: 417 VPDLALLHLNSNRFCGVXXXXXXXXXXXXXXXXSNNRFVGAFPAVVLALPSLRYLDLRFN 596
+PD+AL H NSN F G SNN+F G FP VL + +L +LD+RFN
Sbjct: 106766 LPDIALFHANSNNFIGTITSQISKLPYLYELDLSNNKFSGPFPMAVLGMNTLTFLDIRFN 106587
Query: 597 DFEGPIPPPLFDRPLDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRMA 776
F G +P +F + L+ + +N+N L +P NL S +L LA+N+ G IP ++ +
Sbjct: 106586 SFSGGVPQQIFTQNLEVLFINNNLLTQNLPDNLATSSIFLLTLANNKFIGSIPRNLPKAL 106407
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNL 956
++L E+VL++++LTGC+P ++G + VFDV N L GPLP ++ + ++ +N+AGN+
Sbjct: 106406 SSLTEVVLLNNELTGCLPHEIGYFQEAVVFDVGNNQLTGPLPMSLSCLEKVEVVNLAGNM 106227
Query: 957 LRGPVPSAVCGXXXXXXXXXXXXXXXXHLVPWVR 1058
G VP VC H+ P+ R
Sbjct: 106226 FYGMVPDFVCAGLENLVNFSLSDNYFTHVGPFCR 106125
Score = 40.5 bits (82), Expect(2) = 5e-051
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1 / -1
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCAPRPSDGA 345
++ I SDP T +W G ++C Y G YC P + +
Sbjct: 106949 KSLITSDPLGVTKSWIGSDICNYKGFYCDHPPDNNS 106842
>gb|AC148098.3| Medicago truncatula clone mth2-15b16, complete sequence
Length = 97953
Score = 182 bits (393), Expect(2) = 5e-051
Identities = 76/214 (35%), Positives = 118/214 (55%)
Frame = +3 / -3
Query: 417 VPDLALLHLNSNRFCGVXXXXXXXXXXXXXXXXSNNRFVGAFPAVVLALPSLRYLDLRFN 596
+PD+AL H NSN F G SNN+F G FP VL + +L +LD+RFN
Sbjct: 95476 LPDIALFHANSNNFIGTITSQISKLPYLYELDLSNNKFSGPFPMAVLGMNTLTFLDIRFN 95297
Query: 597 DFEGPIPPPLFDRPLDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRMA 776
F G +P +F + L+ + +N+N L +P NL S +L LA+N+ G IP ++ +
Sbjct: 95296 SFSGGVPQQIFTQNLEVLFINNNLLTQNLPDNLATSSIFLLTLANNKFIGSIPRNLPKAL 95117
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNL 956
++L E+VL++++LTGC+P ++G + VFDV N L GPLP ++ + ++ +N+AGN+
Sbjct: 95116 SSLTEVVLLNNELTGCLPHEIGYFQEAVVFDVGNNQLTGPLPMSLSCLEKVEVVNLAGNM 94937
Query: 957 LRGPVPSAVCGXXXXXXXXXXXXXXXXHLVPWVR 1058
G VP VC H+ P+ R
Sbjct: 94936 FYGMVPDFVCAGLENLVNFSLSDNYFTHVGPFCR 94835
Score = 40.5 bits (82), Expect(2) = 5e-051
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1 / -3
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCAPRPSDGA 345
++ I SDP T +W G ++C Y G YC P + +
Sbjct: 95659 KSLITSDPLGVTKSWIGSDICNYKGFYCDHPPDNNS 95552
>gb|AW696792.1|AW696792 NF109A05ST1F1036 Developing stem Medicago truncatula cDNA clone
NF109A05ST 5', mRNA sequence
Length = 654
Score = 127 bits (272), Expect(3) = 3e-043
Identities = 51/88 (57%), Positives = 61/88 (69%)
Frame = +3 / +3
Query: 423 DLALLHLNSNRFCGVXXXXXXXXXXXXXXXXSNNRFVGAFPAVVLALPSLRYLDLRFNDF 602
DL+LLHLNSNRFCG+ SNNRFVG FP+VVL+LPSL YLDLR+N+F
Sbjct: 390 DLSLLHLNSNRFCGIIPKTFSNLTHLYELDLSNNRFVGPFPSVVLSLPSLTYLDLRYNEF 569
Query: 603 EGPIPPPLFDRPLDAILLNSNRLRGPIP 686
EGP+PP LF++ DA LN+NR IP
Sbjct: 570 EGPLPPELFNKAFDAFFLNNNRFTSSIP 653
Score = 62.5 bits (130), Expect(3) = 3e-043
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +1 / +3
Query: 247 IFSDPSNFTSNWAGPNVCAYNGIYCAPRPSDGALAV 354
I+SDP N TSNW GP+VC Y GIYCAP D + V
Sbjct: 213 IYSDPKNITSNWVGPSVCNYTGIYCAPSLDDPKITV 320
Score = 25.8 bits (50), Expect(3) = 3e-043
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 369 NHADIAGHIPADL 407
NHADIAG +P +L
Sbjct: 339 NHADIAGFLPDEL 377
>emb|CR967438.1| mth4-36F5RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 414
Score = 130 bits (279), Expect(2) = 9e-040
Identities = 50/86 (58%), Positives = 66/86 (76%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNNRF FP VL++P + ++D+RFN+FEG IPP LF++ LDAI +N+NR IP N+
Sbjct: 14 SNNRFAR*FPCHVLSIPDINFIDIRFNEFEGEIPPELFNKTLDAIFINNNRFTSTIPENM 193
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRM 773
GNSPASV+V A+N + GCIP SIG+M
Sbjct: 194 GNSPASVIVFANNGISGCIPSSIGQM 271
Score = 55.1 bits (114), Expect(2) = 9e-040
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +3 / +2
Query: 756 PSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLPPAVGG 917
PS LNE V+I ++LTGC+P +G L +L VFDVS N G LP + G
Sbjct: 251 PSSIGQMKNLNEFVVIGNNLTGCLPEDIGKLQQLAVFDVSENLFVGALPNTLQG 412
>gb|BF638921.1|BF638921 NF062F12PL1F1101 Phosphate starved leaf Medicago truncatula cDNA
clone NF062F12PL 5', mRNA sequence
Length = 649
Score = 165 bits (355), Expect = 1e-039
Identities = 71/157 (45%), Positives = 94/157 (59%)
Frame = +3 / +1
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 58 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 237
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVS 875
G++PA L AHN G IP SIG TL E++ + + GC+P ++G L K TVFDVS
Sbjct: 238 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEGCLPYEIGYLKKATVFDVS 417
Query: 876 GNHLQGPLPPAVGGMAVLQQLNVAGNLLRGPVPSAVC 986
N L GP+P + G + +Q LN+A N G VP +VC
Sbjct: 418 QNSLTGPIPASFGCLEKIQFLNLAHNKFYGTVPESVC 528
>gb|BG449572.1|BG449572 NF054A09IN1F1067 Insect herbivory Medicago truncatula cDNA clone
NF054A09IN 5', mRNA sequence
Length = 667
Score = 165 bits (355), Expect = 1e-039
Identities = 71/157 (45%), Positives = 94/157 (59%)
Frame = +3 / +1
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 79 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 258
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVS 875
G++PA L AHN G IP SIG TL E++ + + GC+P ++G L K TVFDVS
Sbjct: 259 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEGCLPYEIGYLKKATVFDVS 438
Query: 876 GNHLQGPLPPAVGGMAVLQQLNVAGNLLRGPVPSAVC 986
N L GP+P + G + +Q LN+A N G VP +VC
Sbjct: 439 QNSLTGPIPASFGCLEKIQFLNLAHNKFYGTVPESVC 549
>gb|AC148469.12| Medicago truncatula clone mth2-11b3, WORKING DRAFT SEQUENCE, 26
unordered pieces
Length = 70373
Score = 165 bits (355), Expect = 1e-039
Identities = 71/157 (45%), Positives = 94/157 (59%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 43880 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 44059
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVS 875
G++PA L AHN G IP SIG TL E++ + + GC+P ++G L K TVFDVS
Sbjct: 44060 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEGCLPYEIGYLKKATVFDVS 44239
Query: 876 GNHLQGPLPPAVGGMAVLQQLNVAGNLLRGPVPSAVC 986
N L GP+P + G + +Q LN+A N G VP +VC
Sbjct: 44240 QNSLTGPIPASFGCLEKIQFLNLAHNKFYGTVPESVC 44350
>emb|CR299912.1| mte1-18A19RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 685
Score = 159 bits (342), Expect = 7e-038
Identities = 69/155 (44%), Positives = 92/155 (59%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 221 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 400
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVS 875
G++PA L AHN G IP SIG TL E++ + + GC+P ++G L K TVFDVS
Sbjct: 401 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEGCLPYEIGYLKKATVFDVS 580
Query: 876 GNHLQGPLPPAVGGMAVLQQLNVAGNLLRGPVPSA 980
N L GP+P + G + +Q LN+A N G VP +
Sbjct: 581 QNSLTGPIPASFGCLEKIQFLNLAHNKFYGTVPES 685
>emb|CR496597.1| mth2-172A18RM2 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 493
Score = 126 bits (270), Expect(2) = 2e-036
Identities = 53/87 (60%), Positives = 63/87 (72%)
Frame = +3 / -3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN FVG FP+VVL P L+YLD+RFNDFEG +P LF++ LDAI LN+NR IP L
Sbjct: 437 SNNHFVGNFPSVVLTWPGLKYLDIRFNDFEGCLPHELFEKELDAIFLNNNRFTCGIPETL 258
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMA 776
G S ASV+ A+N+ GCIP SIG MA
Sbjct: 257 GKSKASVVTFANNQFTGCIPKSIGNMA 177
Score = 47.8 bits (98), Expect(2) = 2e-036
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3 / -3
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHLQGPLP 902
A LNEIVL+ + L GC P ++G+L + V DV N G LP
Sbjct: 179 ANLNEIVLLGNGLGGCFPQELGMLGNIVVLDVRQNGFVGTLP 54
>gb|CX527797.1|CX527797 s13dNF47E02AT019_516106 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 562
Score = 154 bits (330), Expect = 3e-036
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 125 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 304
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVS 875
G++PA L AHN G IP SIG TL E++ + + GC+P ++G L K TVFDVS
Sbjct: 305 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEGCLPYEIGYLKKATVFDVS 484
Query: 876 GNHLQGPLPPAVGGMAVLQQLNVAGN 953
N L GP+P + G + +Q LN+A N
Sbjct: 485 QNSLTGPIPASFGCLEXIQFLNLAHN 562
>gb|AW694785.2|AW694785 NF079H10ST1F1091 Developing stem Medicago truncatula cDNA clone
NF079H10ST 5', mRNA sequence
Length = 435
Score = 137 bits (294), Expect = 3e-031
Identities = 58/130 (44%), Positives = 77/130 (59%)
Frame = +3 / +2
Query: 525 RFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANLGNS 704
+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N G++
Sbjct: 2 KLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENFGST 181
Query: 705 PASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNH 884
PA L AHN G IP SIG TL E++ + + GC+P ++G L K TVFDVS N
Sbjct: 182 PARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEGCLPYEIGYLKKATVFDVSQNS 361
Query: 885 LQGPLPPAVG 914
L GP+P + G
Sbjct: 362 LTGPIPASFG 391
>emb|CR491864.1| mth2-165M24FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 406
Score = 70.7 bits (148), Expect(4) = 4e-031
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDR 635
SNNRF G FP VVL+LP L++LD+RFN+FEG +P LFD+
Sbjct: 287 SNNRFAGKFPKVVLSLPVLKFLDIRFNEFEGTVPKELFDK 406
Score = 58.3 bits (121), Expect(4) = 4e-031
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 238 RTAIFSDPSNFTSNWAGPNVCAYNGIYCA 324
+ AI SDP NFT+NW G NVC+Y GIYCA
Sbjct: 8 KQAILSDPLNFTTNWVGSNVCSYTGIYCA 94
Score = 35.0 bits (70), Expect(4) = 4e-031
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / +2
Query: 423 DLALLHLNSNRFCG 464
DLAL H+NSNRFCG
Sbjct: 194 DLALFHINSNRFCG 235
Score = 28.1 bits (55), Expect(4) = 4e-031
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 369 NHADIAGHIPADLPL 413
NHADIAG++P +L L
Sbjct: 143 NHADIAGYLPDELGL 187
>gb|BQ157179.1|BQ157179 NF102A09IR1F1069 Irradiated Medicago truncatula cDNA clone
NF102A09IR 5', mRNA sequence
Length = 680
Score = 128 bits (274), Expect(3) = 6e-030
Identities = 56/124 (45%), Positives = 73/124 (58%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 306 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 485
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVS 875
G++PA L AHN G IP SIG TL E++ + + G +P ++G L K TVFDVS
Sbjct: 486 GSTPARYLTFAHNNFVGEIPXSIGNANKTLTEVLFLGNKFXGWLPYEIGYLKKATVFDVS 665
Query: 876 GNHL 887
N L
Sbjct: 666 QNSL 677
Score = 24.0 bits (46), Expect(3) = 6e-030
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
++ ++GI C P+ AVAG+D
Sbjct: 66 HLVTFHGILCGIFPNTNDRAVAGLD 140
Score = 22.6 bits (43), Expect(3) = 6e-030
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +1
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 25 DPTGYTSNW 51
>emb|CR497223.1| mth2-173I21RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 374
Score = 69.3 bits (145), Expect(3) = 2e-029
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +3 / -1
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDA 647
SNN FVG FP VVL P L+YLD+RFN FEG +P LF++ LDA
Sbjct: 371 SNNHFVGNFPFVVLTWPGLKYLDIRFNAFEGCLPHELFEKELDA 240
Score = 56.1 bits (116), Expect(3) = 2e-029
Identities = 25/46 (54%), Positives = 29/46 (63%)
Frame = +3 / -2
Query: 639 LDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRMA 776
L I LN+NR IP LG S ASV+ A+N+ GCIP SIG MA
Sbjct: 247 LTQIFLNNNRFTCGIPETLGKSKASVVTFANNQFTGCIPKSIGNMA 110
Score = 43.7 bits (89), Expect(3) = 2e-029
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3 / -2
Query: 777 ATLNEIVLIDDDLTGCVPPQVGLLTKLTVFDVSGNHL 887
A LNEIVL+ + L GC P ++G+L + V DV+ N +
Sbjct: 112 ANLNEIVLLGNGLGGCFPQELGMLGNIVVLDVNQNRV 2
>gb|BG455228.1|BG455228 NF051B11PL1F1090 Phosphate starved leaf Medicago truncatula cDNA
clone NF051B11PL 5', mRNA sequence
Length = 667
Score = 116 bits (249), Expect(3) = 1e-027
Identities = 49/113 (43%), Positives = 66/113 (58%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 324 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 503
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTK 854
G++PA L AHN G IP SIG TL E++ + + GC+P ++G L K
Sbjct: 504 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLXNKFEGCLPYEIGYLKK 662
Score = 27.2 bits (53), Expect(3) = 1e-027
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 84 DTCNFHGILCGIFPNTNDRAVAGLD 158
Score = 22.6 bits (43), Expect(3) = 1e-027
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 45 DPTGYTSNW 71
>gb|AW694180.1|AW694180 NF073E09ST1F1070 Developing stem Medicago truncatula cDNA clone
NF073E09ST 5', mRNA sequence
Length = 659
Score = 100 bits (213), Expect(4) = 3e-027
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 284 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 463
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLI 803
G++PA L AHN G IP SIG TL E++ +
Sbjct: 464 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFL 571
Score = 33.1 bits (66), Expect(4) = 3e-027
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +3
Query: 819 GCVPPQVGLLTKLTVFDVS 875
GC+P ++G L K TVFDVS
Sbjct: 588 GCLPYEIGYLKKATVFDVS 644
Score = 27.2 bits (53), Expect(4) = 3e-027
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 44 DTCNFHGILCGIFPNTNDRAVAGLD 118
Score = 22.6 bits (43), Expect(4) = 3e-027
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 5 DPTGYTSNW 31
>gb|AL389835.1|AL389835 MtBC57G04F1 MtBC Medicago truncatula cDNA clone MtBC57G04 T3, mRNA
sequence
Length = 396
Score = 122 bits (261), Expect = 1e-026
Identities = 48/101 (47%), Positives = 66/101 (65%)
Frame = +3 / +3
Query: 684 PANLGNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVPPQVGLLTKLTV 863
P N G PASV+V A+N + GCIP S+ M T+NEI++ + + GC+P +G L K+TV
Sbjct: 3 PENFGKMPASVVVFANNDIQGCIPSSVANMKDTINEIIMTNSRMKGCLPNDIGKLDKVTV 182
Query: 864 FDVSGNHLQGPLPPAVGGMAVLQQLNVAGNLLRGPVPSAVC 986
FDVS N G LP ++ GM L+QLNVA N G +P ++C
Sbjct: 183 FDVSFNEFVGELPESISGMKSLEQLNVAHNKFSGVIPESIC 305
>gb|CX527751.1|CX527751 s13dNF38H12AT104_516014 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 631
Score = 106 bits (227), Expect(3) = 1e-024
Identities = 45/105 (42%), Positives = 60/105 (57%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 312 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 491
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVP 830
G++PA L AHN G IP SIG TL E++ + + C+P
Sbjct: 492 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEXCLP 626
Score = 27.2 bits (53), Expect(3) = 1e-024
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 72 DTCNFHGILCGIFPNTNDRAVAGLD 146
Score = 22.6 bits (43), Expect(3) = 1e-024
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 33 DPTGYTSNW 59
>gb|BQ165102.1|BQ165102 EST610971 KVKC Medicago truncatula cDNA clone pKVKC-5G8, mRNA
sequence
Length = 765
Score = 68.4 bits (143), Expect(5) = 3e-024
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3 / +1
Query: 606 GPIPPPLFDRPLDAILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRMAATL 785
G +P LF + LD I +N+N+ +P N G++PA L AHN G IP SIG TL
Sbjct: 400 GSVPSQLFKKDLDVIFINNNKFSQCLPENFGSTPARYLTFAHNNFVGEIPRSIGNANKTL 579
Query: 786 NEIVLIDDDLTG 821
E++ + + G
Sbjct: 580 TEVLFLGNKFEG 615
Score = 39.6 bits (80), Expect(5) = 3e-024
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEG 608
SNN+ VG FP VL L +LDLRFN G
Sbjct: 309 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTG 401
Score = 33.1 bits (66), Expect(5) = 3e-024
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3 / +1
Query: 852 KLTVFDVSGNHLQGPLPPAVG 914
K TVFDVS N L GP+P + G
Sbjct: 646 KATVFDVSQNSLTGPIPASFG 708
Score = 27.2 bits (53), Expect(5) = 3e-024
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 69 DTCNFHGILCGIFPNTNDRAVAGLD 143
Score = 22.6 bits (43), Expect(5) = 3e-024
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 30 DPTGYTSNW 56
>gb|BF004880.1|BF004880 EST433441 DSLC Medicago truncatula cDNA clone pDSLC-28O9, mRNA
sequence
Length = 577
Score = 108 bits (231), Expect(2) = 4e-024
Identities = 45/105 (42%), Positives = 61/105 (58%)
Frame = +3 / +1
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDL+FN G +P LF + LD I +N+N+ +P N
Sbjct: 259 SNNKLVGEFPKEVLDSKQLVFLDLKFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 438
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVP 830
G++PA L AHN G IP SIG TL E++ + + GC+P
Sbjct: 439 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEGCLP 573
Score = 27.2 bits (53), Expect(2) = 4e-024
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +1
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 19 DTCNFHGILCGIFPNTNDRAVAGLD 93
>gb|AW256747.1|AW256747 EST304884 KV2 Medicago truncatula cDNA clone KV2-5N11, mRNA
sequence
Length = 643
Score = 105 bits (223), Expect(3) = 4e-024
Identities = 45/105 (42%), Positives = 60/105 (57%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 321 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 500
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCVP 830
G++PA L AHN G IP SIG TL E++ + + G +P
Sbjct: 501 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFLGNKFEGWLP 635
Score = 27.2 bits (53), Expect(3) = 4e-024
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 81 DTCNFHGILCGIFPNTNDRAVAGLD 155
Score = 22.6 bits (43), Expect(3) = 4e-024
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 42 DPTGYTSNW 68
>gb|BG449964.1|BG449964 NF012A02DT1F1017 Drought Medicago truncatula cDNA clone NF012A02DT
5', mRNA sequence
Length = 430
Score = 111 bits (236), Expect = 3e-023
Identities = 46/137 (33%), Positives = 77/137 (56%)
Frame = +3 / +1
Query: 648 ILLNSNRLRGPIPANLGNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLIDDDLTGCV 827
+ +N+N L +P NL S +L LA+N+ G IP ++ + ++L E+VL++++LTGC+
Sbjct: 4 LFINNNLLTQNLPDNLATSSIFLLTLANNKFIGSIPRNLPKALSSLTEVVLLNNELTGCL 183
Query: 828 PPQVGLLTKLTVFDVSGNHLQGPLPPAVGGMAVLQQLNVAGNLLRGPVPSAVCGXXXXXX 1007
P ++G + VFDV N L GPLP ++ + ++ +N+AGN+ G VP VC
Sbjct: 184 PHEIGYFQEAVVFDVGNNQLTGPLPMSLSCLEKVEVVNLAGNMFYGMVPDFVCAGLENLV 363
Query: 1008 XXXXXXXXXXHLVPWVR 1058
H+ P+ R
Sbjct: 364 NFSLSDNYFTHVGPFCR 414
>gb|CX527940.1|CX527940 s13dNF50A06AT049_516392 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 613
Score = 100 bits (213), Expect(3) = 9e-023
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 312 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 491
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLI 803
G++PA L AHN G IP SIG TL E++ +
Sbjct: 492 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFL 599
Score = 27.2 bits (53), Expect(3) = 9e-023
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 72 DTCNFHGILCGIFPNTNDRAVAGLD 146
Score = 22.6 bits (43), Expect(3) = 9e-023
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +3
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 33 DPTGYTSNW 59
>gb|CX528230.1|CX528230 s13dNF53B08AT073_516972 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 617
Score = 100 bits (213), Expect(3) = 9e-023
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 326 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 505
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLI 803
G++PA L AHN G IP SIG TL E++ +
Sbjct: 506 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFL 613
Score = 27.2 bits (53), Expect(3) = 9e-023
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 86 DTCNFHGILCGIFPNTNDRAVAGLD 160
Score = 22.6 bits (43), Expect(3) = 9e-023
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 47 DPTGYTSNW 73
>gb|CX528337.1|CX528337 s13dNF54C11AT086_517186 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 626
Score = 100 bits (213), Expect(3) = 9e-023
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 326 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 505
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLI 803
G++PA L AHN G IP SIG TL E++ +
Sbjct: 506 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVLFL 613
Score = 27.2 bits (53), Expect(3) = 9e-023
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 86 DTCNFHGILCGIFPNTNDRAVAGLD 160
Score = 22.6 bits (43), Expect(3) = 9e-023
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 47 DPTGYTSNW 73
>gb|CX527184.1|CX527184 s13dNF40H03AT032_514880 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 612
Score = 99.6 bits (211), Expect(3) = 2e-022
Identities = 43/94 (45%), Positives = 55/94 (58%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 326 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 505
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIV 797
G++PA L AHN G IP SIG TL E++
Sbjct: 506 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEVL 607
Score = 27.2 bits (53), Expect(3) = 2e-022
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 86 DTCNFHGILCGIFPNTNDRAVAGLD 160
Score = 22.6 bits (43), Expect(3) = 2e-022
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 47 DPTGYTSNW 73
>gb|BE124210.1|BE124210 EST394335 DSIL Medicago truncatula cDNA clone pDSIL-13K6, mRNA
sequence
Length = 590
Score = 99.1 bits (210), Expect(3) = 2e-022
Identities = 43/93 (46%), Positives = 54/93 (58%)
Frame = +3 / +2
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 311 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 490
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEI 794
G++PA L AHN G IP SIG TL E+
Sbjct: 491 GSTPARYLTFAHNNFVGEIPRSIGNANKTLTEV 589
Score = 27.2 bits (53), Expect(3) = 2e-022
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 71 DTCNFHGILCGIFPNTNDRAVAGLD 145
Score = 22.6 bits (43), Expect(3) = 2e-022
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1 / +2
Query: 256 DPSNFTSNW 282
DP+ +TSNW
Sbjct: 32 DPTGYTSNW 58
>gb|BI268400.1|BI268400 NF120F08IN1F1075 Insect herbivory Medicago truncatula cDNA clone
NF120F08IN 5', mRNA sequence
Length = 559
Score = 99.6 bits (211), Expect(2) = 2e-021
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +3 / +3
Query: 516 SNNRFVGAFPAVVLALPSLRYLDLRFNDFEGPIPPPLFDRPLDAILLNSNRLRGPIPANL 695
SNN+ VG FP VL L +LDLRFN G +P LF + LD I +N+N+ +P N
Sbjct: 270 SNNKLVGEFPKEVLDSKQLVFLDLRFNQLTGSVPSQLFKKDLDVIFINNNKFSQCLPENF 449
Query: 696 GNSPASVLVLAHNRLGGCIPPSIGRMAATLNEIVLI 803
G++PA L AHN G IP SIG TL E++ +
Sbjct: 450 GSTPARYLTFAHNNFVGEIPRSIGDANKTLTEVLFL 557
Score = 27.2 bits (53), Expect(2) = 2e-021
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1 / +3
Query: 292 NVCAYNGIYCAPRPSDGALAVAGID 366
+ C ++GI C P+ AVAG+D
Sbjct: 30 DTCNFHGILCGIFPNTNDRAVAGLD 104
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 400,519,568
Number of Sequences: 392609
Number of extensions: 3392579
Number of successful extensions: 22264
Number of sequences better than 1.0e-020: 48
length of database: 147,244,331
effective HSP length: 55
effective length of database: 125,650,836
effective search space used: 38574806652
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)