TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131543.2.12
(621 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW329629.1|AW329629 N200889e rootphos(-) Medicago trunca... 110 2e-023
gb|AL377900.1|AL377900 MtBB34F10F1 MtBB Medicago truncatula... 110 2e-023
gb|AL377901.1|AL377901 MtBB34F10R1 MtBB Medicago truncatula... 110 2e-023
gb|AL377934.1|AL377934 MtBB34H08F1 MtBB Medicago truncatula... 110 2e-023
gb|AL377935.1|AL377935 MtBB34H08R1 MtBB Medicago truncatula... 110 2e-023
gb|AL381163.1|AL381163 MtBB57C08F1 MtBB Medicago truncatula... 110 2e-023
gb|AL381164.1|AL381164 MtBB57C08R1 MtBB Medicago truncatula... 110 2e-023
gb|AL388578.1|AL388578 MtBC49E02F1 MtBC Medicago truncatula... 110 2e-023
gb|BG457047.1|BG457047 NF069A08PL1F1055 Phosphate starved l... 110 2e-023
gb|BI264033.1|BI264033 NF113F02PL1F1027 Phosphate starved l... 110 2e-023
gb|BI264320.1|BI264320 NF118G02PL1F1020 Phosphate starved l... 110 2e-023
gb|BQ150120.1|BQ150120 NF008E07LF1F1054 Developing leaf Med... 110 2e-023
gb|CX520493.1|CX520493 s13dNF55D10VI080_448772 Virus-Infect... 110 2e-023
gb|CX539905.1|CX539905 s13dNF0FE08GS055_463082 Germinating ... 110 2e-023
gb|DW017375.1|DW017375 EST1226336 MTY Medicago truncatula c... 110 2e-023
gb|AJ498678.1|AJ498678 AJ498678 MTPOSE Medicago truncatula ... 110 3e-023
gb|BQ149926.1|BQ149926 NF040A09LF1F1066 Developing leaf Med... 107 2e-022
gb|CX536563.1|CX536563 s13dNF24G10GS083_456300 Germinating ... 106 3e-022
gb|BI268734.1|BI268734 NF024G10GS1F1083 Germinating Seed Me... 106 3e-022
gb|BI272910.1|BI272910 NF098H01FL1F1015 Developing flower M... 102 4e-021
>gb|AW329629.1|AW329629 N200889e rootphos(-) Medicago truncatula cDNA clone MHRP-22D2, mRNA
sequence
Length = 369
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +2
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 38 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 178
>gb|AL377900.1|AL377900 MtBB34F10F1 MtBB Medicago truncatula cDNA clone MtBB34F10 T3, mRNA
sequence
Length = 409
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +1
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 37 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 177
>gb|AL377901.1|AL377901 MtBB34F10R1 MtBB Medicago truncatula cDNA clone MtBB34F10 T7, mRNA
sequence
Length = 430
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +1
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 37 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 177
>gb|AL377934.1|AL377934 MtBB34H08F1 MtBB Medicago truncatula cDNA clone MtBB34H08 T3, mRNA
sequence
Length = 308
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +2
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 26 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 166
>gb|AL377935.1|AL377935 MtBB34H08R1 MtBB Medicago truncatula cDNA clone MtBB34H08 T7, mRNA
sequence
Length = 343
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 30 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 170
>gb|AL381163.1|AL381163 MtBB57C08F1 MtBB Medicago truncatula cDNA clone MtBB57C08 T3, mRNA
sequence
Length = 436
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 36 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 176
>gb|AL381164.1|AL381164 MtBB57C08R1 MtBB Medicago truncatula cDNA clone MtBB57C08 T7, mRNA
sequence
Length = 458
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 36 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 176
>gb|AL388578.1|AL388578 MtBC49E02F1 MtBC Medicago truncatula cDNA clone MtBC49E02 T3, mRNA
sequence
Length = 367
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +2
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 38 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 178
>gb|BG457047.1|BG457047 NF069A08PL1F1055 Phosphate starved leaf Medicago truncatula cDNA
clone NF069A08PL 5', mRNA sequence
Length = 441
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 45 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 185
>gb|BI264033.1|BI264033 NF113F02PL1F1027 Phosphate starved leaf Medicago truncatula cDNA
clone NF113F02PL 5', mRNA sequence
Length = 438
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 39 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 179
>gb|BI264320.1|BI264320 NF118G02PL1F1020 Phosphate starved leaf Medicago truncatula cDNA
clone NF118G02PL 5', mRNA sequence
Length = 424
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 45 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 185
>gb|BQ150120.1|BQ150120 NF008E07LF1F1054 Developing leaf Medicago truncatula cDNA clone
NF008E07LF 5', mRNA sequence
Length = 801
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +2
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 149 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 289
>gb|CX520493.1|CX520493 s13dNF55D10VI080_448772 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 421
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +1
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 40 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 180
>gb|CX539905.1|CX539905 s13dNF0FE08GS055_463082 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 418
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +1
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 37 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 177
>gb|DW017375.1|DW017375 EST1226336 MTY Medicago truncatula cDNA clone MTYAS84, mRNA
sequence
Length = 396
Score = 110 bits (235), Expect = 2e-023
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 57 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYAR 197
>gb|AJ498678.1|AJ498678 AJ498678 MTPOSE Medicago truncatula cDNA clone mt--acc955207d11,
mRNA sequence
Length = 436
Score = 110 bits (234), Expect = 3e-023
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNG+KKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 60 MAKSKNHTAHNQSYKAHKNGVKKPKRHRHTSTKGMDPKFLRNQRYAR 200
>gb|BQ149926.1|BQ149926 NF040A09LF1F1066 Developing leaf Medicago truncatula cDNA clone
NF040A09LF 5', mRNA sequence
Length = 873
Score = 107 bits (228), Expect = 2e-022
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKRH TSTKGMDPKFLRN RY+R
Sbjct: 150 MAKSKNHTAHNQSYKAHKNGIKKPKRHLHTSTKGMDPKFLRNQRYAR 290
>gb|CX536563.1|CX536563 s13dNF24G10GS083_456300 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 426
Score = 106 bits (227), Expect = 3e-022
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1 / +3
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKR R TSTKGMDPKFLRN RY+R
Sbjct: 45 MAKSKNHTAHNQSYKAHKNGIKKPKRRRHTSTKGMDPKFLRNQRYAR 185
>gb|BI268734.1|BI268734 NF024G10GS1F1083 Germinating Seed Medicago truncatula cDNA clone
NF024G10GS 5', mRNA sequence
Length = 435
Score = 106 bits (226), Expect = 3e-022
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +1 / +2
Query: 88 MAKSKNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
MAKSKNHTAHNQS+KAHKNGIKKPKR R TSTKGMDPKFLRN RY+R
Sbjct: 20 MAKSKNHTAHNQSYKAHKNGIKKPKRXRHTSTKGMDPKFLRNQRYAR 160
>gb|BI272910.1|BI272910 NF098H01FL1F1015 Developing flower Medicago truncatula cDNA clone
NF098H01FL 5', mRNA sequence
Length = 260
Score = 102 bits (218), Expect = 4e-021
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +1 / +2
Query: 100 KNHTAHNQSFKAHKNGIKKPKRHRQTSTKGMDPKFLRNLRYSR 228
KNHTAHNQS+KAHKNGIKKPKRHR TSTKGMDPKFLRN RY+R
Sbjct: 53 KNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNXRYAR 181
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 518,695,077
Number of Sequences: 392609
Number of extensions: 6692758
Number of successful extensions: 44924
Number of sequences better than 1.0e-020: 22
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 19158603640
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)