TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.680
(461 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW774326.1|AW774326 EST333477 KV3 Medicago truncatula cD... 142 4e-033
gb|AL373484.1|AL373484 MtBB01A12F2 MtBB Medicago truncatula... 142 4e-033
gb|BI272786.1|BI272786 NF092B07FL1F1060 Developing flower M... 142 4e-033
gb|BQ147880.1|BQ147880 NF048C04FL1F1033 Developing flower M... 142 4e-033
gb|CB895063.1|CB895063 EST647855 HOGA Medicago truncatula c... 142 4e-033
gb|AL389311.1|AL389311 MtBC54A11F1 MtBC Medicago truncatula... 139 3e-032
emb|CR323359.1| mte1-50I9FM1 BAC end, cultivar Jemalong A17... 138 4e-032
gb|BE204236.1|BE204236 EST396912 KV0 Medicago truncatula cD... 138 4e-032
gb|AL382681.1|AL382681 MtBC09D04F1 MtBC Medicago truncatula... 138 4e-032
gb|BE999730.1|BE999730 EST431453 GVSN Medicago truncatula c... 138 4e-032
gb|BF639844.1|BF639844 NF019H01IN1F1013 Insect herbivory Me... 138 4e-032
gb|BG580808.1|BG580808 EST482537 GVN Medicago truncatula cD... 138 4e-032
gb|BI312315.1|BI312315 EST5314065 GESD Medicago truncatula ... 138 4e-032
gb|BQ138013.1|BQ138013 NF012B12PH1F1094 Phoma-infected Medi... 138 4e-032
gb|BQ149590.1|BQ149590 NF106B04FL1F1041 Developing flower M... 138 4e-032
gb|CB893982.1|CB893982 EST646774 HOGA Medicago truncatula c... 138 4e-032
gb|CB894192.1|CB894192 EST646984 HOGA Medicago truncatula c... 138 4e-032
gb|CX516750.1|CX516750 s13dNF04D03VI030_390509 Virus-Infect... 134 9e-031
gb|AC161406.1| Medicago truncatula chromosome 2 clone mth2-... 132 4e-030
gb|BG647299.1|BG647299 EST508918 HOGA Medicago truncatula c... 127 1e-028
gb|AC146783.3| Medicago truncatula clone mth2-115m15, WORKI... 100 2e-028
gb|CG928999.1|CG928999 MBEBS42TRB mth2 Medicago truncatula ... 100 2e-028
gb|BI272068.1|BI272068 NF019C09FL1F1069 Developing flower M... 100 2e-028
gb|BI270747.1|BI270747 NF001F06FL1F1059 Developing flower M... 100 2e-028
gb|AW257173.1|AW257173 EST305310 KV2 Medicago truncatula cD... 95 8e-027
gb|AJ845437.1|AJ845437 AJ845437 MtSNF Medicago truncatula c... 100 8e-024
gb|BG453625.1|BG453625 NF097B11LF1F1090 Developing leaf Med... 109 2e-023
gb|BG581818.1|BG581818 EST483554 GVN Medicago truncatula cD... 105 4e-022
gb|BE205491.1|BE205491 EST398167 KV0 Medicago truncatula cD... 100 1e-021
gb|CB891862.1|CB891862 EST648831 KV3 Medicago truncatula cD... 101 6e-021
gb|AJ845578.1|AJ845578 AJ845578 MtSNF Medicago truncatula c... 101 6e-021
>gb|AW774326.1|AW774326 EST333477 KV3 Medicago truncatula cDNA clone pKV3-22A20, mRNA
sequence
Length = 682
Score = 142 bits (304), Expect = 4e-033
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLANDAKAAK GGERQFNG+VDVY+KTL+SDGIAGLYRGFNISCVGIIVYRG
Sbjct: 368 YSLDYARTRLANDAKAAKKGGERQFNGMVDVYKKTLQSDGIAGLYRGFNISCVGIIVYRG 547
Query: 261 LY 256
LY
Sbjct: 548 LY 553
>gb|AL373484.1|AL373484 MtBB01A12F2 MtBB Medicago truncatula cDNA clone MtBB01A12 T3, mRNA
sequence
Length = 496
Score = 142 bits (304), Expect = 4e-033
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLANDAKAAK GGERQFNG+VDVY+KTL+SDGIAGLYRGFNISCVGIIVYRG
Sbjct: 83 YSLDYARTRLANDAKAAKKGGERQFNGMVDVYKKTLQSDGIAGLYRGFNISCVGIIVYRG 262
Query: 261 LY 256
LY
Sbjct: 263 LY 268
>gb|BI272786.1|BI272786 NF092B07FL1F1060 Developing flower Medicago truncatula cDNA clone
NF092B07FL 5', mRNA sequence
Length = 661
Score = 142 bits (304), Expect = 4e-033
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLANDAKAAK GGERQFNG+VDVY+KTL+SDGIAGLYRGFNISCVGIIVYRG
Sbjct: 174 YSLDYARTRLANDAKAAKKGGERQFNGMVDVYKKTLQSDGIAGLYRGFNISCVGIIVYRG 353
Query: 261 LY 256
LY
Sbjct: 354 LY 359
>gb|BQ147880.1|BQ147880 NF048C04FL1F1033 Developing flower Medicago truncatula cDNA clone
NF048C04FL 5', mRNA sequence
Length = 448
Score = 142 bits (304), Expect = 4e-033
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLANDAKAAK GGERQFNG+VDVY+KTL+SDGIAGLYRGFNISCVGIIVYRG
Sbjct: 177 YSLDYARTRLANDAKAAKKGGERQFNGMVDVYKKTLQSDGIAGLYRGFNISCVGIIVYRG 356
Query: 261 LY 256
LY
Sbjct: 357 LY 362
>gb|CB895063.1|CB895063 EST647855 HOGA Medicago truncatula cDNA clone HOGA-33B1, mRNA
sequence
Length = 811
Score = 142 bits (304), Expect = 4e-033
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLANDAKAAK GGERQFNG+VDVY+KTL+SDGIAGLYRGFNISCVGIIVYRG
Sbjct: 579 YSLDYARTRLANDAKAAKKGGERQFNGMVDVYKKTLQSDGIAGLYRGFNISCVGIIVYRG 758
Query: 261 LY 256
LY
Sbjct: 759 LY 764
>gb|AL389311.1|AL389311 MtBC54A11F1 MtBC Medicago truncatula cDNA clone MtBC54A11 T3, mRNA
sequence
Length = 492
Score = 139 bits (298), Expect = 3e-032
Identities = 57/62 (91%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLANDAKAAK GGERQF G+VDVY+KTL+SDGIAGLYRGFNISCVGIIVYRG
Sbjct: 41 YSLDYARTRLANDAKAAKKGGERQFTGMVDVYKKTLQSDGIAGLYRGFNISCVGIIVYRG 220
Query: 261 LY 256
LY
Sbjct: 221 LY 226
>emb|CR323359.1| mte1-50I9FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 782
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / -2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 382 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 203
Query: 261 LY 256
LY
Sbjct: 202 LY 197
>gb|BE204236.1|BE204236 EST396912 KV0 Medicago truncatula cDNA clone pKV0-14L16, mRNA
sequence
Length = 708
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 372 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 551
Query: 261 LY 256
LY
Sbjct: 552 LY 557
>gb|AL382681.1|AL382681 MtBC09D04F1 MtBC Medicago truncatula cDNA clone MtBC09D04 T3, mRNA
sequence
Length = 454
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 239 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 418
Query: 261 LY 256
LY
Sbjct: 419 LY 424
>gb|BE999730.1|BE999730 EST431453 GVSN Medicago truncatula cDNA clone pGVSN-24K2, mRNA
sequence
Length = 480
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 274 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 453
Query: 261 LY 256
LY
Sbjct: 454 LY 459
>gb|BF639844.1|BF639844 NF019H01IN1F1013 Insect herbivory Medicago truncatula cDNA clone
NF019H01IN 5', mRNA sequence
Length = 653
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 119 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 298
Query: 261 LY 256
LY
Sbjct: 299 LY 304
>gb|BG580808.1|BG580808 EST482537 GVN Medicago truncatula cDNA clone pGVN-62K19 5' end,
mRNA sequence
Length = 557
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 126 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 305
Query: 261 LY 256
LY
Sbjct: 306 LY 311
>gb|BI312315.1|BI312315 EST5314065 GESD Medicago truncatula cDNA clone pGESD17N11 5' end,
mRNA sequence
Length = 778
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 42 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 221
Query: 261 LY 256
LY
Sbjct: 222 LY 227
>gb|BQ138013.1|BQ138013 NF012B12PH1F1094 Phoma-infected Medicago truncatula cDNA clone
NF012B12PH 5', mRNA sequence
Length = 669
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 68 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 247
Query: 261 LY 256
LY
Sbjct: 248 LY 253
>gb|BQ149590.1|BQ149590 NF106B04FL1F1041 Developing flower Medicago truncatula cDNA clone
NF106B04FL 5', mRNA sequence
Length = 639
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 44 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 223
Query: 261 LY 256
LY
Sbjct: 224 LY 229
>gb|CB893982.1|CB893982 EST646774 HOGA Medicago truncatula cDNA clone HOGA-29L21, mRNA
sequence
Length = 864
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 654 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 833
Query: 261 LY 256
LY
Sbjct: 834 LY 839
>gb|CB894192.1|CB894192 EST646984 HOGA Medicago truncatula cDNA clone HOGA-30I24, mRNA
sequence
Length = 805
Score = 138 bits (297), Expect = 4e-032
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = -3 / +1
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRG
Sbjct: 610 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRG 789
Query: 261 LY 256
LY
Sbjct: 790 LY 795
>gb|CX516750.1|CX516750 s13dNF04D03VI030_390509 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 531
Score = 134 bits (287), Expect = 9e-031
Identities = 54/61 (88%), Positives = 59/61 (96%)
Frame = -3 / +3
Query: 438 SLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGL 259
+LDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRGL
Sbjct: 9 ALDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRGL 188
Query: 258 Y 256
Y
Sbjct: 189 Y 191
>gb|AC161406.1| Medicago truncatula chromosome 2 clone mth2-83p17, *** SEQUENCING IN
PROGRESS ***, 32 unordered pieces
Length = 112882
Score = 132 bits (282), Expect = 4e-030
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = -3 / -3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLA+DAK+ K GGERQFNGL+DVY+KTL+SDGIAGLYRGFN+S VGIIVYRG
Sbjct: 32504 YSLDYARTRLASDAKSTKKGGERQFNGLIDVYKKTLQSDGIAGLYRGFNVSVVGIIVYRG 32325
Query: 261 LY 256
LY
Sbjct: 32324 LY 32319
>gb|BG647299.1|BG647299 EST508918 HOGA Medicago truncatula cDNA clone pHOGA-16B17 5' end,
mRNA sequence
Length = 796
Score = 127 bits (271), Expect = 1e-028
Identities = 51/60 (85%), Positives = 57/60 (95%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRG 262
YSLDYARTRLA+DAK+ K GGERQFNGL+DVY+KTL+SDGIAGLYRGFN+S VGIIVYRG
Sbjct: 582 YSLDYARTRLASDAKSTKKGGERQFNGLIDVYKKTLQSDGIAGLYRGFNVSVVGIIVYRG 761
>gb|AC146783.3| Medicago truncatula clone mth2-115m15, WORKING DRAFT SEQUENCE, 16
unordered pieces
Length = 43877
Score = 100 bits (214), Expect(2) = 2e-028
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -3 / +2
Query: 396 AAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
A KG G RQFNGL+DVY+KTL +DGIAGLYRGFNISCVGIIVYRGLY
Sbjct: 29252 AKKGAGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLY 29392
Score = 45.5 bits (93), Expect(2) = 2e-028
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGG 382
YSLDYARTRLANDAKAAK G
Sbjct: 29204 YSLDYARTRLANDAKAAKKG 29263
>gb|CG928999.1|CG928999 MBEBS42TRB mth2 Medicago truncatula genomic clone 22H11, DNA
sequence
Length = 954
Score = 100 bits (214), Expect(2) = 2e-028
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -3 / +3
Query: 396 AAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
A KG G RQFNGL+DVY+KTL +DGIAGLYRGFNISCVGIIVYRGLY
Sbjct: 606 AKKGAGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLY 746
Score = 45.5 bits (93), Expect(2) = 2e-028
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGG 382
YSLDYARTRLANDAKAAK G
Sbjct: 558 YSLDYARTRLANDAKAAKKG 617
>gb|BI272068.1|BI272068 NF019C09FL1F1069 Developing flower Medicago truncatula cDNA clone
NF019C09FL 5', mRNA sequence
Length = 718
Score = 100 bits (214), Expect(2) = 2e-028
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -3 / +3
Query: 396 AAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
A KG G RQFNGL+DVY+KTL +DGIAGLYRGFNISCVGIIVYRGLY
Sbjct: 378 AKKGAGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLY 518
Score = 45.5 bits (93), Expect(2) = 2e-028
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGG 382
YSLDYARTRLANDAKAAK G
Sbjct: 330 YSLDYARTRLANDAKAAKKG 389
>gb|BI270747.1|BI270747 NF001F06FL1F1059 Developing flower Medicago truncatula cDNA clone
NF001F06FL 5', mRNA sequence
Length = 583
Score = 100 bits (214), Expect(2) = 2e-028
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -3 / +2
Query: 396 AAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
A KG G RQFNGL+DVY+KTL +DGIAGLYRGFNISCVGIIVYRGLY
Sbjct: 347 AKKGAGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLY 487
Score = 45.5 bits (93), Expect(2) = 2e-028
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -3 / +2
Query: 441 YSLDYARTRLANDAKAAKGG 382
YSLDYARTRLANDAKAAK G
Sbjct: 299 YSLDYARTRLANDAKAAKKG 358
>gb|AW257173.1|AW257173 EST305310 KV2 Medicago truncatula cDNA clone KV2-7B3, mRNA sequence
Length = 396
Score = 94.5 bits (200), Expect(2) = 8e-027
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = -3 / +3
Query: 396 AAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
A KG G RQFNGL+DVY+KTL +DGIAGLYRGFNISCV II YRGLY
Sbjct: 249 AKKGAGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVRIIEYRGLY 389
Score = 45.5 bits (93), Expect(2) = 8e-027
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGG 382
YSLDYARTRLANDAKAAK G
Sbjct: 201 YSLDYARTRLANDAKAAKKG 260
>gb|AJ845437.1|AJ845437 AJ845437 MtSNF Medicago truncatula cDNA clone MtNF04J08N1, mRNA
sequence
Length = 316
Score = 100 bits (214), Expect(2) = 8e-024
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -3 / -2
Query: 396 AAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
A KG G RQFNGL+DVY+KTL +DGIAGLYRGFNISCVGIIVYRGLY
Sbjct: 285 AKKGAGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLY 145
Score = 28.6 bits (56), Expect(2) = 8e-024
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 420 TRLANDAKAAKGG 382
TRLANDAKAAK G
Sbjct: 312 TRLANDAKAAKKG 274
>gb|BG453625.1|BG453625 NF097B11LF1F1090 Developing leaf Medicago truncatula cDNA clone
NF097B11LF 5', mRNA sequence
Length = 661
Score = 109 bits (233), Expect = 2e-023
Identities = 44/50 (88%), Positives = 48/50 (96%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNI 292
YSLDYARTRLAND+KAAK GGERQFNGLVDVY+KTL +DG+AGLYRGFNI
Sbjct: 507 YSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNI 656
>gb|BG581818.1|BG581818 EST483554 GVN Medicago truncatula cDNA clone pGVN-65P6 5' end, mRNA
sequence
Length = 730
Score = 105 bits (224), Expect = 4e-022
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = -3 / +3
Query: 441 YSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRG 301
YSLDYARTRLANDAKAAK GGERQFNG+VDVY+KTL+SDGIAGLYRG
Sbjct: 564 YSLDYARTRLANDAKAAKKGGERQFNGMVDVYKKTLQSDGIAGLYRG 704
>gb|BE205491.1|BE205491 EST398167 KV0 Medicago truncatula cDNA clone pKV0-21F2, mRNA
sequence
Length = 583
Score = 100 bits (214), Expect(2) = 1e-021
Identities = 40/47 (85%), Positives = 43/47 (91%)
Frame = -3 / +2
Query: 396 AAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
A KG G RQFNGL+DVY+KTL +DGIAGLYRGFNISCVGIIVYRGLY
Sbjct: 290 AKKGAGGRQFNGLIDVYKKTLATDGIAGLYRGFNISCVGIIVYRGLY 430
Score = 22.6 bits (43), Expect(2) = 1e-021
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 414 LANDAKAAKGG 382
+ANDAKAAK G
Sbjct: 269 VANDAKAAKKG 301
>gb|CB891862.1|CB891862 EST648831 KV3 Medicago truncatula cDNA clone KV3-52K12, mRNA
sequence
Length = 672
Score = 101 bits (216), Expect = 6e-021
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = -3 / -1
Query: 390 KGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
K GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRGLY
Sbjct: 672 KKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRGLY 538
>gb|AJ845578.1|AJ845578 AJ845578 MtSNF Medicago truncatula cDNA clone MtNF07G18N1, mRNA
sequence
Length = 311
Score = 101 bits (216), Expect = 6e-021
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = -3 / +2
Query: 390 KGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLY 256
K GGERQFNGLVDVY+KTL +DG+AGLYRGFNISCVGIIVYRGLY
Sbjct: 2 KKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRGLY 136
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 479,188,421
Number of Sequences: 392609
Number of extensions: 6750187
Number of successful extensions: 84746
Number of sequences better than 1.0e-020: 40
length of database: 147,244,331
effective HSP length: 52
effective length of database: 126,828,663
effective search space used: 12809694963
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)