TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.392
(725 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW685878.1|AW685878 NF031C11NR1F1000 Nodulated root Medi... 157 2e-037
gb|AW736296.1|AW736296 EST332380 KV3 Medicago truncatula cD... 157 2e-037
gb|AW126242.2|AW126242 N100087e rootphos(-) Medicago trunca... 157 2e-037
gb|AW126320.2|AW126320 N100427e rootphos(-) Medicago trunca... 157 2e-037
gb|BF639361.1|BF639361 NF030B12IN1F1094 Insect herbivory Me... 157 2e-037
gb|BG589124.1|BG589124 EST490933 MHRP- Medicago truncatula ... 157 2e-037
gb|BI270844.1|BI270844 NF056A12FL1F1097 Developing flower M... 157 2e-037
gb|BI310367.1|BI310367 EST5312117 GESD Medicago truncatula ... 157 2e-037
gb|BQ124869.1|BQ124869 EST610445 GLSD Medicago truncatula c... 157 2e-037
gb|AJ499119.1|AJ499119 AJ499119 MTPOSE Medicago truncatula ... 157 2e-037
gb|CA858046.1|CA858046 EST635301 GLSD Medicago truncatula c... 157 2e-037
gb|CA919277.1|CA919277 EST636995 MTUS Medicago truncatula c... 157 2e-037
gb|CA990031.1|CA990031 EST643539 GESD Medicago truncatula c... 157 2e-037
gb|CA990210.1|CA990210 EST643718 GESD Medicago truncatula c... 157 2e-037
gb|CB893751.1|CB893751 EST646543 HOGA Medicago truncatula c... 157 2e-037
gb|CX518559.1|CX518559 s13dNF33D10VI090_423951 Virus-Infect... 157 2e-037
gb|CX526183.1|CX526183 s13dNF29B05AT045_510110 Aphid-Infect... 157 2e-037
gb|CX531417.1|CX531417 s13dNF30G10MJ081_256784 Methyl Jasmo... 157 2e-037
gb|CX542390.1|CX542390 s13dNF84E02GS007_468096 Germinating ... 157 2e-037
gb|BI273032.1|BI273032 NF043C05FL1F1037 Developing flower M... 154 1e-036
gb|BG645999.1|BG645999 EST507618 KV3 Medicago truncatula cD... 144 1e-033
gb|CA918546.1|CA918546 EST642693 GESD Medicago truncatula c... 144 2e-033
gb|CA990190.1|CA990190 EST643698 GESD Medicago truncatula c... 139 4e-032
gb|CX540300.1|CX540300 s13dNF68D09GS077_463874 Germinating ... 136 5e-031
gb|CX539172.1|CX539172 s13dNF62A01GS001_461604 Germinating ... 133 4e-030
gb|AC149474.15| Medicago truncatula clone mth2-122l24, comp... 63 1e-029
gb|AC149080.12| Medicago truncatula clone mth2-75j5, comple... 63 1e-029
gb|CA989442.1|CA989442 EST642950 GLSD Medicago truncatula c... 123 3e-027
gb|CA920769.1|CA920769 EST638487 MTUS Medicago truncatula c... 123 3e-027
gb|AL380335.1|AL380335 MtBB51G10F1 MtBB Medicago truncatula... 122 6e-027
gb|CB892354.1|CB892354 EST649323 KV3 Medicago truncatula cD... 122 6e-027
gb|CB894403.1|CB894403 EST647195 HOGA Medicago truncatula c... 122 6e-027
gb|CA918545.1|CA918545 EST642692 GESD Medicago truncatula c... 101 5e-026
gb|AJ388833.1|AJ388833 AJ388833 Medicago truncatula R108 Me... 112 7e-024
gb|CB891329.1|CB891329 EST648298 KV3 Medicago truncatula cD... 108 9e-023
>gb|AW685878.1|AW685878 NF031C11NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF031C11NR 5', mRNA sequence
Length = 667
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 371 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 550
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 551 YAKQVAEETWGK 586
>gb|AW736296.1|AW736296 EST332380 KV3 Medicago truncatula cDNA clone pKV3-12H4, mRNA
sequence
Length = 640
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 133 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 312
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 313 YAKQVAEETWGK 348
>gb|AW126242.2|AW126242 N100087e rootphos(-) Medicago truncatula cDNA clone MHRP-1H2, mRNA
sequence
Length = 504
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 44 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 223
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 224 YAKQVAEETWGK 259
>gb|AW126320.2|AW126320 N100427e rootphos(-) Medicago truncatula cDNA clone MHRP-5H2, mRNA
sequence
Length = 508
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 44 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 223
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 224 YAKQVAEETWGK 259
>gb|BF639361.1|BF639361 NF030B12IN1F1094 Insect herbivory Medicago truncatula cDNA clone
NF030B12IN 5', mRNA sequence
Length = 696
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 225 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 404
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 405 YAKQVAEETWGK 440
>gb|BG589124.1|BG589124 EST490933 MHRP- Medicago truncatula cDNA clone pMHRP-59D16, mRNA
sequence
Length = 759
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 82 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 261
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 262 YAKQVAEETWGK 297
>gb|BI270844.1|BI270844 NF056A12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF056A12FL 5', mRNA sequence
Length = 648
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 37 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 216
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 217 YAKQVAEETWGK 252
>gb|BI310367.1|BI310367 EST5312117 GESD Medicago truncatula cDNA clone pGESD7J20 5' end,
mRNA sequence
Length = 747
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 257 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 436
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 437 YAKQVAEETWGK 472
>gb|BQ124869.1|BQ124869 EST610445 GLSD Medicago truncatula cDNA clone pGLSD-37B3, mRNA
sequence
Length = 760
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 264 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 443
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 444 YAKQVAEETWGK 479
>gb|AJ499119.1|AJ499119 AJ499119 MTPOSE Medicago truncatula cDNA clone mt--acc955212d09,
mRNA sequence
Length = 703
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 128 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 307
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 308 YAKQVAEETWGK 343
>gb|CA858046.1|CA858046 EST635301 GLSD Medicago truncatula cDNA clone pGLSD-26H20, mRNA
sequence
Length = 840
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 403 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 582
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 583 YAKQVAEETWGK 618
>gb|CA919277.1|CA919277 EST636995 MTUS Medicago truncatula cDNA clone MTUS-11C11, mRNA
sequence
Length = 642
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 89 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 268
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 269 YAKQVAEETWGK 304
>gb|CA990031.1|CA990031 EST643539 GESD Medicago truncatula cDNA clone GESD-27G16, mRNA
sequence
Length = 694
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 7 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 186
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 187 YAKQVAEETWGK 222
>gb|CA990210.1|CA990210 EST643718 GESD Medicago truncatula cDNA clone GESD-27L16, mRNA
sequence
Length = 703
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 57 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 236
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 237 YAKQVAEETWGK 272
>gb|CB893751.1|CB893751 EST646543 HOGA Medicago truncatula cDNA clone HOGA-28L10, mRNA
sequence
Length = 922
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 272 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 451
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 452 YAKQVAEETWGK 487
>gb|CX518559.1|CX518559 s13dNF33D10VI090_423951 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 630
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 273 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 452
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 453 YAKQVAEETWGK 488
>gb|CX526183.1|CX526183 s13dNF29B05AT045_510110 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 629
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 208 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 387
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 388 YAKQVAEETWGK 423
>gb|CX531417.1|CX531417 s13dNF30G10MJ081_256784 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 618
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 121 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 300
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 301 YAKQVAEETWGK 336
>gb|CX542390.1|CX542390 s13dNF84E02GS007_468096 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 455
Score = 157 bits (337), Expect = 2e-037
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 54 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 233
Query: 189 LAKTFAEETWGK 224
AK AEETWGK
Sbjct: 234 YAKQVAEETWGK 269
>gb|BI273032.1|BI273032 NF043C05FL1F1037 Developing flower Medicago truncatula cDNA clone
NF043C05FL 5', mRNA sequence
Length = 413
Score = 154 bits (331), Expect = 1e-036
Identities = 58/72 (80%), Positives = 62/72 (86%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 182 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 361
Query: 189 LAKTFAEETWGK 224
AK AE TWGK
Sbjct: 362 YAKQVAEXTWGK 397
>gb|BG645999.1|BG645999 EST507618 KV3 Medicago truncatula cDNA clone pKV3-48M19 5' end,
mRNA sequence
Length = 742
Score = 144 bits (310), Expect = 1e-033
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = +3 / +2
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPA 188
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 476 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPE 655
Query: 189 LAKTFAEE 212
AK AEE
Sbjct: 656 YAKQVAEE 679
>gb|CA918546.1|CA918546 EST642693 GESD Medicago truncatula cDNA clone GESD-27E17, mRNA
sequence
Length = 816
Score = 144 bits (309), Expect = 2e-033
Identities = 54/73 (73%), Positives = 60/73 (82%)
Frame = +3 / -2
Query: 6 QKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
Q+K + P GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 632 QRKSRTPTTSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDP 453
Query: 186 ALAKTFAEETWGK 224
AK AEETWGK
Sbjct: 452 EYAKQVAEETWGK 414
>gb|CA990190.1|CA990190 EST643698 GESD Medicago truncatula cDNA clone GESD-27H16, mRNA
sequence
Length = 650
Score = 139 bits (299), Expect = 4e-032
Identities = 52/65 (80%), Positives = 56/65 (86%)
Frame = +3 / +2
Query: 30 YQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAE 209
Y GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP AK AE
Sbjct: 2 YSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPEYAKQVAE 181
Query: 210 ETWGK 224
ETWGK
Sbjct: 182 ETWGK 196
>gb|CX540300.1|CX540300 s13dNF68D09GS077_463874 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 591
Score = 136 bits (291), Expect = 5e-031
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDP 185
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDDP
Sbjct: 414 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDP 590
>gb|CX539172.1|CX539172 s13dNF62A01GS001_461604 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 618
Score = 133 bits (284), Expect = 4e-030
Identities = 49/58 (84%), Positives = 53/58 (91%)
Frame = +3 / +3
Query: 9 KKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
KKIKNPNY GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLFDN++ITDD
Sbjct: 444 KKIKNPNYSGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDD 617
>gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete sequence
Length = 129008
Score = 62.9 bits (131), Expect(3) = 1e-029
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3 / -1
Query: 135 QVKSGTLFDNIIITDDPALAKTFAEETWGK 224
QVKSGTLFDN++ITDDP AK AEETWGK
Sbjct: 43250 QVKSGTLFDNVVITDDPEYAKQVAEETWGK 43161
Score = 55.1 bits (114), Expect(3) = 1e-029
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3 / -2
Query: 66 PDFKDDPYIYAFDSLKYIGIELWQV 140
PDFKDDP IY F LKY+GIELWQV
Sbjct: 43405 PDFKDDPDIYVFPKLKYVGIELWQV 43331
Score = 50.6 bits (104), Expect(3) = 1e-029
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3 / -1
Query: 9 KKIKNPNYQGKWKAPMIDNP 68
+KIKNPNY GKWKAP+IDNP
Sbjct: 43556 QKIKNPNYSGKWKAPLIDNP 43497
>gb|AC149080.12| Medicago truncatula clone mth2-75j5, complete sequence
Length = 96907
Score = 62.9 bits (131), Expect(3) = 1e-029
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +3 / +1
Query: 135 QVKSGTLFDNIIITDDPALAKTFAEETWGK 224
QVKSGTLFDN++ITDDP AK AEETWGK
Sbjct: 27790 QVKSGTLFDNVVITDDPEYAKQVAEETWGK 27879
Score = 55.1 bits (114), Expect(3) = 1e-029
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3 / +2
Query: 66 PDFKDDPYIYAFDSLKYIGIELWQV 140
PDFKDDP IY F LKY+GIELWQV
Sbjct: 27635 PDFKDDPDIYVFPKLKYVGIELWQV 27709
Score = 50.6 bits (104), Expect(3) = 1e-029
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3 / +1
Query: 9 KKIKNPNYQGKWKAPMIDNP 68
+KIKNPNY GKWKAP+IDNP
Sbjct: 27484 QKIKNPNYSGKWKAPLIDNP 27543
>gb|CA989442.1|CA989442 EST642950 GLSD Medicago truncatula cDNA clone pGLSD-41H5, mRNA
sequence
Length = 529
Score = 123 bits (263), Expect = 3e-027
Identities = 43/70 (61%), Positives = 57/70 (81%)
Frame = +3 / +2
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK+G+++DNI+I DD
Sbjct: 302 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIYDNILICDD 481
Query: 183 PALAKTFAEE 212
P AK EE
Sbjct: 482 PQYAKQIVEE 511
>gb|CA920769.1|CA920769 EST638487 MTUS Medicago truncatula cDNA clone MTUS-32G8, mRNA
sequence
Length = 746
Score = 123 bits (263), Expect = 3e-027
Identities = 43/70 (61%), Positives = 57/70 (81%)
Frame = +3 / -2
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK+G+++DNI+I DD
Sbjct: 571 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIYDNILICDD 392
Query: 183 PALAKTFAEE 212
P AK EE
Sbjct: 391 PQYAKQIVEE 362
>gb|AL380335.1|AL380335 MtBB51G10F1 MtBB Medicago truncatula cDNA clone MtBB51G10 T3, mRNA
sequence
Length = 479
Score = 122 bits (261), Expect = 6e-027
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = +3 / +1
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK G++FDNI+I DD
Sbjct: 250 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKGGSVFDNILICDD 429
Query: 183 PALAKTFAEETW 218
P AK +E +
Sbjct: 430 PEYAKQVVDEVF 465
>gb|CB892354.1|CB892354 EST649323 KV3 Medicago truncatula cDNA clone KV3-54A7, mRNA
sequence
Length = 715
Score = 122 bits (261), Expect = 6e-027
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = +3 / -2
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK G++FDNI+I DD
Sbjct: 576 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKGGSVFDNILICDD 397
Query: 183 PALAKTFAEETW 218
P AK +E +
Sbjct: 396 PEYAKQVVDEVF 361
>gb|CB894403.1|CB894403 EST647195 HOGA Medicago truncatula cDNA clone HOGA-31G7, mRNA
sequence
Length = 688
Score = 122 bits (261), Expect = 6e-027
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = +3 / +1
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
++KKIKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK G++FDNI+I DD
Sbjct: 121 KRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKGGSVFDNILICDD 300
Query: 183 PALAKTFAEETW 218
P AK +E +
Sbjct: 301 PEYAKQVVDEVF 336
>gb|CA918545.1|CA918545 EST642692 GESD Medicago truncatula cDNA clone GESD-27E17, mRNA
sequence
Length = 837
Score = 101 bits (215), Expect(2) = 5e-026
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +3 / +3
Query: 6 QKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLF 158
Q+K + P GKWKAP+IDNPDFKDDP IY F LKY+GIELWQVKSGTLF
Sbjct: 585 QRKSRTPTTVGKWKAPLIDNPDFKDDPDIYVFPKLKYVGIELWQVKSGTLF 737
Score = 37.7 bits (76), Expect(2) = 5e-026
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3 / +1
Query: 156 FDNIIITDDPALAKTFAEET 215
FDN++ITDDP AK AEET
Sbjct: 736 FDNVVITDDPEYAKQVAEET 795
>gb|AJ388833.1|AJ388833 AJ388833 Medicago truncatula R108 Medicago truncatula cDNA clone
MtNo199 similar to calreticulin, mRNA sequence
Length = 599
Score = 112 bits (239), Expect = 7e-024
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = +3 / +2
Query: 60 DNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWGK 224
DNPDFKDD IY F LKY+GIELWQVKSGTLFDN++ITDDP AK AEETWGK
Sbjct: 2 DNPDFKDDRDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPEYAKQVAEETWGK 166
>gb|CB891329.1|CB891329 EST648298 KV3 Medicago truncatula cDNA clone KV3-49L8, mRNA
sequence
Length = 871
Score = 108 bits (231), Expect = 9e-023
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = +3 / +2
Query: 3 EQKKIKNPNYQGKWKAPMIDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDD 182
E K+IKNPNY+GKWK P IDNP+F+DDP +Y +KY+GIE+WQVK ++FDNI+I DD
Sbjct: 692 ETKEIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPIKYVGIEVWQVKGWSVFDNILICDD 871
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 592,315,253
Number of Sequences: 392609
Number of extensions: 7059875
Number of successful extensions: 52833
Number of sequences better than 1.0e-020: 41
length of database: 147,244,331
effective HSP length: 54
effective length of database: 126,043,445
effective search space used: 23570124215
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)