TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCK13d03.yg.3.1
         (2611 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AW698762.1|AW698762  r336 non-glandular-haired subtracted...   207   4e-054

>gb|AW698762.1|AW698762 r336 non-glandular-haired subtracted cDNA library Medicago sativa
            cDNA, mRNA sequence
          Length = 390

 Score =  207 bits (447), Expect = 4e-054
 Identities = 88/122 (72%), Positives = 99/122 (81%)
 Frame = +2 / +2

                                                                        
Query: 1400 PFRYTEFIDDLTTQVQNKVIPMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEH 1579
            P+++ +FI DLT  V+N VIPM RIDDAV RIL VKFTMGLFENP  D SL  ELG Q H
Sbjct: 2    PYKFKDFIQDLTLLVKNNVIPMDRIDDAVERILVVKFTMGLFENPPADFSLVNELGSQAH 181

                                                                        
Query: 1580 RELAREAVRKSLVLLKNGKSSYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSS 1759
            R+LAREA+RKSLVLLKNGK+  A LLPLPKKA KILVAG+HA++LG QCGGWTI WQG  
Sbjct: 182  RDLAREALRKSLVLLKNGKNQSAQLLPLPKKARKILVAGTHADNLGYQCGGWTIKWQGFI 361

              
Query: 1760 GN 1765
            GN
Sbjct: 362  GN 367




 Score =  141 bits (303), Expect = 3e-034
 Identities = 67/117 (57%), Positives = 79/117 (67%)
 Frame = -2 / -1

                                                                        
Query: 1749 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 1570
            CH+IVHPPHW P+  A +PAT+I  AFFGRG + A    PF   T DFL+AS A S C+ 
Sbjct: 351  CHLIVHPPHWYPKLSA*VPATKIFRAFFGRGRS*ALWFFPFLSSTSDFLSASLARSLCAW 172

                                                                     
Query: 1569 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMGMTLF*TCVVRSSMNSVYLNG 1399
             PSS  +L+S  GFS RPMVN T +IL TASSI  +GMTLF T  VRS M S+ L G
Sbjct: 171  LPSSLTKLKSAGGFSKRPMVNFTTKILSTASSIRSIGMTLFLTKSVRS*MKSLNLYG 1



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 20,865,951
Number of Sequences: 7669
Number of extensions: 298457
Number of successful extensions: 2058
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 45
effective length of database: 903,463
effective search space used: 744453512
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)