TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QCF7a10.yg.2.1
         (523 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO516304.1|CO516304  s13dSG69G1100086_445936 Glandular tr...   127   1e-030

>gb|CO516304.1|CO516304 s13dSG69G1100086_445936 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 523

 Score =  127 bits (272), Expect = 1e-030
 Identities = 54/80 (67%), Positives = 61/80 (76%)
 Frame = +3 / +2

                                                                       
Query: 6   DARRKPRNVGKIIAALVLTTLCIFALKQSPGFGGNSVFSRHEPGVTHVLVTGGAGYIGSH 185
           D +RK   +GK+     LT LCI  +K+SP F   S FS HEPGVTHVLVTGGAGYIGSH
Sbjct: 284 DPKRKGNLLGKVFLVAALTALCILVIKRSPSFTTPSPFSVHEPGVTHVLVTGGAGYIGSH 463

                               
Query: 186 AALRLLQDSYRVTIVDNLSR 245
           A LRLL++SYRVTIVDNLSR
Sbjct: 464 ATLRLLKESYRVTIVDNLSR 523




 Score = 96.4 bits (204), Expect = 2e-021
 Identities = 43/70 (61%), Positives = 46/70 (65%)
 Frame = -1 / -2

                                                                       
Query: 241 DRLSTMVTR*LSCKSLKAACEPI*PAPPVTKTWVTPGSWRENTLLPPKPGDCFRANIQSV 62
           DRLSTMVTR* S +S K ACEPI*PAPPVTKTWVTPGSW EN L   K GD     + + 
Sbjct: 519 DRLSTMVTR*DSFRSRKVACEPI*PAPPVTKTWVTPGSWTENGLGVVKDGDLLITKMHNA 340

                     
Query: 61  VRTRAAMIFP 32
           V       FP
Sbjct: 339 VNAATRKTFP 310



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 4,874,689
Number of Sequences: 7669
Number of extensions: 74952
Number of successful extensions: 1541
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 41
effective length of database: 934,139
effective search space used: 123306348
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)