TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAM14e11.yg.2.1
         (197 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY851389.1|  Medicago sativa leaf sucrose-phosphate synth...   133   1e-032
gb|AF322116.2|AF322116  Medicago sativa sucrose-phosphate sy...   125   3e-030
gb|AY468362.2|  Medicago sativa sucrose-phosphate synthase g...   125   3e-030

>gb|AY851389.1| Medicago sativa leaf sucrose-phosphate synthase mRNA, partial cds
          Length = 645

 Score =  133 bits (285), Expect = 1e-032
 Identities = 56/64 (87%), Positives = 61/64 (95%)
 Frame = -2 / +3

                                                                       
Query: 196 PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
           PMVLTGHSLGRNKLEQ+LKQGR S E+I+STYKIMRRIE EEL+LDA+ELVITSTRQEID
Sbjct: 453 PMVLTGHSLGRNKLEQLLKQGRQSWEDINSTYKIMRRIEAEELSLDAAELVITSTRQEID 632

               
Query: 16  EQWG 5
           EQWG
Sbjct: 633 EQWG 644




 Score = 99.1 bits (210), Expect = 8e-023
 Identities = 43/64 (67%), Positives = 45/64 (70%)
 Frame = +3 / -3

                                                                       
Query: 6   PHCSSISCLVLVMTXXXXXXXXXXXXIRLMILYVESISSLDMRPCFRICSSLFLPSE*PV 185
           PHCSSISCLVLVMT            I L+ILYVE ISS D RPC R CSSLFLPSE*PV
Sbjct: 643 PHCSSISCLVLVMTSSAASKESSSASILLIILYVELISSHDWRPCLRSCSSLFLPSE*PV 464

               
Query: 186 STMG 197
            T+G
Sbjct: 463 RTIG 452



>gb|AF322116.2|AF322116 Medicago sativa sucrose-phosphate synthase mRNA, complete cds
          Length = 3579

 Score =  125 bits (268), Expect = 3e-030
 Identities = 50/65 (76%), Positives = 61/65 (93%)
 Frame = -2 / +2

                                                                        
Query: 196  PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
            PM+ TGHSLGR+KLEQ+LKQGR+S++EI++TYKIMRRIE EELALD SE+VITSTRQE++
Sbjct: 1133 PMLFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELALDGSEIVITSTRQEVE 1312

                 
Query: 16   EQWGL 2
            EQW L
Sbjct: 1313 EQWRL 1327



>gb|AY468362.2| Medicago sativa sucrose-phosphate synthase gene, promoter region and
            complete cds
          Length = 8933

 Score =  125 bits (268), Expect = 3e-030
 Identities = 50/65 (76%), Positives = 61/65 (93%)
 Frame = -2 / +1

                                                                        
Query: 196  PMVLTGHSLGRNKLEQILKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEID 17
            PM+ TGHSLGR+KLEQ+LKQGR+S++EI++TYKIMRRIE EELALD SE+VITSTRQE++
Sbjct: 3919 PMLFTGHSLGRDKLEQLLKQGRLSRDEINTTYKIMRRIEAEELALDGSEIVITSTRQEVE 4098

                 
Query: 16   EQWGL 2
            EQW L
Sbjct: 4099 EQWRL 4113



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 1,778,705
Number of Sequences: 7669
Number of extensions: 18107
Number of successful extensions: 3423
Number of sequences better than 1.0e-020: 3
length of database: 1,248,568
effective HSP length: 37
effective length of database: 964,815
effective search space used: 27014820
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)