TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AF019146.2.1
         (1761 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO515609.1|CO515609  s13dSG47E0500039_418277 Glandular tr...   196   5e-063
gb|CO511782.1|CO511782  s13dSG02A0400033_103464 Glandular tr...   143   3e-062
gb|CO515300.1|CO515300  s13dSG48C1200098_417659 Glandular tr...   190   8e-060
gb|CO514893.1|CO514893  s13dSG56F0300031_328446 Glandular tr...   134   6e-042
gb|CO512362.1|CO512362  s13dSG80A0800053_114238 Glandular tr...   103   1e-035
emb|AJ245868.1|MSA245868  Medicago sativa mRNA for cysteine ...    63   1e-033
>gb|CO515609.1|CO515609 s13dSG47E0500039_418277 Glandular trichomes Medicago sativa cDNA,
            mRNA sequence
          Length = 591

 Score =  196 bits (423), Expect(2) = 5e-063
 Identities = 74/121 (61%), Positives = 90/121 (74%)
 Frame = +2 / +1

                                                                        
Query: 779  NGGIDTEADYPFTGHDGTCDLKLKNTRVVSIDSFERVPINYERALQKAVAHQPVSASIEA 958
            NGGID+E DYP+   DG CD   KN +VV+ID +E VP   E ALQKAVA+QP++ ++E 
Sbjct: 7    NGGIDSEEDYPYKAIDGRCDQNRKNAKVVTIDDYEDVPAYDELALQKAVANQPIAVAVEG 186

                                                                        
Query: 959  SRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIVKNSWGTQWGEAGYVRMARN 1138
              R FQLY  G+F GRCGT LDHGV  VGYG+E GKDYWIV+NSWG  WGE GY+R+ RN
Sbjct: 187  GGREFQLYEYGVFTGRCGTALDHGVAAVGYGTENGKDYWIVRNSWGGSWGEQGYIRLERN 366

             
Query: 1139 V 1141
            +
Sbjct: 367  L 369

 Score = 60.6 bits (126), Expect(2) = 5e-063
 Identities = 19/35 (54%), Positives = 25/35 (71%)
 Frame = +2 / +1

                                               
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENA 1357
            VC++ YSC E +TCCC+ EY   C  +GCC LE+A
Sbjct: 487  VCDSYYSCAEGSTCCCIYEYGRSCFEWGCCPLESA 591
>gb|CO511782.1|CO511782 s13dSG02A0400033_103464 Glandular trichomes Medicago sativa cDNA,
            mRNA sequence
          Length = 536

 Score =  143 bits (306), Expect(2) = 3e-062
 Identities = 52/80 (65%), Positives = 63/80 (78%)
 Frame = +2 / +2

                                                                        
Query: 902  ERALQKAVAHQPVSASIEASRRAFQLYSSGIFDGRCGTYLDHGVTVVGYGSEGGKDYWIV 1081
            E ALQKAVA+QP++ ++E   R FQLY  G+F GRCGT LDHGV  VGYG+E GKDYWIV
Sbjct: 5    ELALQKAVANQPIAVAVEGGGREFQLYEYGVFTGRCGTALDHGVAAVGYGTENGKDYWIV 184

                                
Query: 1082 KNSWGTQWGEAGYVRMARNV 1141
            +NSWG  WGE GY+R+ RN+
Sbjct: 185  RNSWGGSWGEQGYIRLERNL 244

 Score =  111 bits (238), Expect(2) = 3e-062
 Identities = 35/57 (61%), Positives = 43/57 (75%)
 Frame = +2 / +2

                                                                     
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDG 1423
            VC++ YSC E +TCCC+ EY G C  +GCC LE+ATCC+D  SCCPH+YPVC  R G
Sbjct: 362  VCDSYYSCAEGSTCCCIYEYGGSCFEWGCCPLESATCCDDRYSCCPHEYPVCDTRAG 532
>gb|CO515300.1|CO515300 s13dSG48C1200098_417659 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 588

 Score =  190 bits (410), Expect(3) = 8e-060
 Identities = 74/113 (65%), Positives = 88/113 (77%)
 Frame = +2 / +2

                                                                       
Query: 497 VGVVGRRRYLPLAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGS 676
           +G V   RY P  G++LP++VDWR+ GAV  VKDQ  CG CWAFSA+AAVEGINKIVTG 
Sbjct: 248 LGGVRSNRYAPRVGDKLPESVDWRKEGAVVGVKDQASCGSCWAFSAIAAVEGINKIVTGD 427

                                                                
Query: 677 LISLSEQELIDCDKFQDQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTC 835
           LISLSEQEL+DCD   ++GC+GGLMD AF F+I NGGID+E DYP+   DG C
Sbjct: 428 LISLSEQELVDCDTSYNEGCNGGLMDYAFEFIISNGGIDSEEDYPYKAIDGRC 586

 Score =  133 bits (286), Expect = 5e-032
 Identities = 62/100 (62%), Positives = 73/100 (73%)
 Frame = -1 / -1

                                                                       
Query: 837 SHVPSWPVNG*SASVSIPPFLIMNTKALSIKPPSQPWSWNLSQSISSCSDSEMRLPVTIL 658
           SH+PS  + G*S+S S+PP L+MN+KA SI PP  P  +++SQS SSCSDSE+R PVTIL
Sbjct: 588 SHLPSIAL*G*SSSESMPPLLMMNSKA*SISPPLHPSLYDVSQSTSSCSDSEIRSPVTIL 409

                                                   
Query: 657 LIPSTAATAENAQHPPHWPWSLTSATAPRSRQSTASGSCS 538
            IPSTAA AENAQ  P   WSLT  TAP   QST SG+ S
Sbjct: 408 FIPSTAAIAENAQQLPQLAWSLTPTTAPSFLQSTDSGNLS 289

 Score = 40.9 bits (83), Expect(3) = 8e-060
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +2 / +2

                                
Query: 404 FRLGLTRFADLTLEEYRARLL 466
           +RLGLTRFADLT EEYR++ L
Sbjct: 149 YRLGLTRFADLTNEEYRSKFL 211

 Score = 33.6 bits (67), Expect(3) = 8e-060
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = +2 / +2

                            
Query: 326 RRLEVFRDNLRYIDAHN 376
           +R E+F+DNL++ID HN
Sbjct: 83  KRFEIFKDNLKFIDEHN 133
>gb|CO514893.1|CO514893 s13dSG56F0300031_328446 Glandular trichomes Medicago sativa cDNA,
            mRNA sequence
          Length = 620

 Score =  134 bits (287), Expect(2) = 6e-042
 Identities = 44/77 (57%), Positives = 56/77 (72%)
 Frame = +2 / +1

                                                                        
Query: 1253 VCNAEYSCPEATTCCCVSEYRGKCLAYGCCELENATCCEDHSSCCPHDYPVCSVRDGTCR 1432
            VC++ YSC E +TCCC+ EY   C  +GCC LE+ATCC+DH SCCPH+YPVC  R G C 
Sbjct: 193  VCDSYYSCAEGSTCCCIYEYGRSCFEWGCCPLESATCCDDHYSCCPHEYPVCDTRAGLCL 372

                             
Query: 1433 KSANSPMMVKALQRKPA 1483
            K  N+P+ VK+ +R PA
Sbjct: 373  KGKNNPLGVKSFKRTPA 423

 Score = 52.4 bits (108), Expect(2) = 6e-042
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = +2 / +1

                                    
Query: 1070 YWIVKNSWGTQWGEAGYVRMARNV 1141
            YWIV+NSWG  WGE GY+R+ RN+
Sbjct: 4    YWIVRNSWGGSWGEQGYIRLERNL 75
>gb|CO512362.1|CO512362 s13dSG80A0800053_114238 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 576

 Score =  103 bits (220), Expect(3) = 1e-035
 Identities = 39/66 (59%), Positives = 46/66 (69%)
 Frame = +2 / +1

                                                                       
Query: 530 LAGEQLPDAVDWRERGAVAEVKDQGQCGGCWAFSAVAAVEGINKIVTGSLISLSEQELID 709
           L    LP+  DWRE+GAV  VKDQG CG CWAFS   A+EG N + TG L+SLSEQ+L+D
Sbjct: 262 LPTNNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGKLVSLSEQQLVD 441

                 
Query: 710 CDKFQD 727
           CD   D
Sbjct: 442 CDHVCD 459

 Score = 52.8 bits (109), Expect(3) = 1e-035
 Identities = 17/32 (53%), Positives = 27/32 (84%)
 Frame = +2 / +1

                                           
Query: 725 DQGCDGGLMDNAFVFMIKNGGIDTEADYPFTG 820
           D GC+GGLM+NAF +++++GG+ +E DY +TG
Sbjct: 481 DSGCNGGLMNNAFEYILQSGGVVSEKDYAYTG 576

 Score = 27.2 bits (53), Expect(3) = 1e-035
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2 / +1

                             
Query: 413 GLTRFADLTLEEYRARLL 466
           G+T+F+DLT  E+R + L
Sbjct: 157 GITKFSDLTASEFRRQFL 210
>emb|AJ245868.1|MSA245868 Medicago sativa mRNA for cysteine protease, partial (cyp15a gene)
          Length = 890

 Score = 62.9 bits (131), Expect(4) = 1e-033
 Identities = 20/37 (54%), Positives = 31/37 (83%)
 Frame = +2 / +1

                                                
Query: 725 DQGCDGGLMDNAFVFMIKNGGIDTEADYPFTGHDGTC 835
           D GC+GGLM+NAF +++++GG+ +E DY +TG DG+C
Sbjct: 142 DSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRDGSC 252

 Score = 62.0 bits (129), Expect(4) = 1e-033
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = +2 / +1

                                                   
Query: 608 CGGCWAFSAVAAVEGINKIVTGSLISLSEQELIDCDKFQD 727
           CG  WAFS   A+EG N + TG L+SLSEQ+L+DCD   D
Sbjct: 1   CGSGWAFSTTGALEGANYLATGKLVSLSEQQLVDCDHVCD 120

 Score = 49.6 bits (102), Expect(4) = 1e-033
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2 / +1

                                        
Query: 1064 KDYWIVKNSWGTQWGEAGYVRMARNVRV 1147
            K YWI+KNSWG  WGE GY ++ R   V
Sbjct: 499  KPYWIIKNSWGQNWGEEGYYKICRGRNV 582

 Score = 28.1 bits (55), Expect(4) = 1e-033
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2 / +1

                          
Query: 1019 LDHGVTVVGYGSEG 1060
            LDHGV +VG+GS G
Sbjct: 433  LDHGVLLVGFGSGG 474
  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 9,464,179
Number of Sequences: 7669
Number of extensions: 101934
Number of successful extensions: 954
Number of sequences better than 1.0e-020: 7
length of database: 1,248,568
effective HSP length: 44
effective length of database: 911,132
effective search space used: 493833544
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)