TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 5532690.2.1
         (863 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512201.1|CO512201  s13dSG03B1200093_113916 Glandular tr...    58   7e-026

>gb|CO512201.1|CO512201 s13dSG03B1200093_113916 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 607

 Score = 58.3 bits (121), Expect(3) = 7e-026
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -1 / +3

                                      
Query: 719 MTDMNMRADPSRGYPGRTYRFYTGDVV 639
           MT+MNMRADP+ GYPGRTYRFY G+ V
Sbjct: 6   MTNMNMRADPATGYPGRTYRFYKGETV 86




 Score = 53.8 bits (111), Expect(3) = 7e-026
 Identities = 26/68 (38%), Positives = 37/68 (54%)
 Frame = -1 / +3

                                                                       
Query: 386 SVPGFPIKQLVGFERVHTAAGSASSVEITVDPCKHMSAANPEGKRVLLLGAHVLTVGDEE 207
           +V   P K L+GFE+V  A  S   V   VD C  +S  +  G R + LG H+L VG+ +
Sbjct: 321 NVHNAPQKHLLGFEKVQLAGKSEGMVRFKVDVCNDLSVVDELGNRKVPLGDHMLHVGNLK 500

                   
Query: 206 FELSIEL* 183
             LS+ +*
Sbjct: 501 HSLSVRI* 524




 Score = 40.5 bits (82), Expect(3) = 7e-026
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1 / +3

                                      
Query: 482 CEALVFSVHVAVSNHGSMDGSHAVLLF 402
           C+ L F +H++V N G M  SH+VLLF
Sbjct: 228 CQNLAFDIHLSVKNMGKMSSSHSVLLF 308



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 8,170,154
Number of Sequences: 7669
Number of extensions: 125371
Number of successful extensions: 1144
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 226985150
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)