TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 44956.2.1
         (1252 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AA735030.1|AA735030  EST00010 young root nodules Medicago...   195   1e-050

>gb|AA735030.1|AA735030 EST00010 young root nodules Medicago sativa subsp. x varia cDNA
           clone Mscp14 5' similar to 3-oxoacyl-(acyl carrier
           protein) reductase homologue, mRNA sequence
          Length = 416

 Score =  195 bits (420), Expect = 1e-050
 Identities = 83/104 (79%), Positives = 92/104 (88%)
 Frame = -3 / +3

                                                                       
Query: 515 GLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKKI 336
           GL GN GQANY+AAKAGVIG TK+VA+EY+SR I VNA+APGFIASDMTA+LG +LEKKI
Sbjct: 9   GLIGNAGQANYAAAKAGVIGLTKSVAKEYSSRGITVNAVAPGFIASDMTAKLGNDLEKKI 188

                                                       
Query: 335 LSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
           L  IPLGRYGQPE VAGLVEFLAL+ AASY+TGQV TIDG MVM
Sbjct: 189 LEAIPLGRYGQPEXVAGLVEFLALSQAASYITGQVFTIDGXMVM 320




 Score =  129 bits (276), Expect = 8e-031
 Identities = 56/85 (65%), Positives = 64/85 (75%)
 Frame = +1 / -2

                                                                       
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
           YITI PS+V TCPV+*LAA L A+NSTNPAT SGWPY PNG+  KIFF       AV+SD
Sbjct: 322 YITIXPSMVKTCPVM*LAA*LSAKNSTNPATXSGWPYRPNGIASKIFFSRSFPNLAVMSD 143

                                    
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
           AMNPGA A T++ LL YS AT FV+
Sbjct: 142 AMNPGATALTVMPLLEYSFATDFVR 68




 Score =  105 bits (225), Expect = 8e-024
 Identities = 49/106 (46%), Positives = 66/106 (62%)
 Frame = +3 / -1

                                                                       
Query: 201 LHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGSHIR 380
           LH+H S+N ++L S +A    K QE     N  WLAIS * N  Q+  LK+ S  GSH+R
Sbjct: 323 LHHHTSINGENLPSDVAGSLTKRQEFH*SSNXFWLAISS*WNCLQNLFLKVIS*LGSHVR 144

                                                         
Query: 381 CNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTN 518
           CNE W NSI+ D SA I   N FC+ N+S    +II L++IA++T+
Sbjct: 143 CNESWSNSINSDASARIFLCNRFCQANYSCFCSSIIGLSSIANQTS 6




 Score =  100 bits (213), Expect = 4e-022
 Identities = 41/102 (40%), Positives = 62/102 (60%)
 Frame = -2 / +2

                                                                       
Query: 507 WQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTWRRA*EENLVN 328
           WQCW S L   +  S+W  K  C+G+  Q++ C C C+R+HCI*+DC+  +  *E++   
Sbjct: 17  WQCWTSQLCCCKSRSNWPDKICCKGIF*QRHHC*CCCSRIHCI*HDCQVRK*P*EKDFGG 196

                                                     
Query: 327 HSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNV 202
           +S+R IWPTR SC +  + G *    L+ W G ++*   G+V
Sbjct: 197 NSIRTIWPTRXSCWISGILGA*SSCQLHHWAGFHH*WXYGDV 322



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 10,271,180
Number of Sequences: 7669
Number of extensions: 157728
Number of successful extensions: 1234
Number of sequences better than 1.0e-020: 2
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 342712773
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)