TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3838024.2.1
(529 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO512437.1|CO512437 s13dSG80H0600048_114388 Glandular tr... 111 1e-042
gb|CO513964.1|CO513964 s13dSG71F1200095_156590 Glandular tr... 106 5e-041
gb|CO512499.1|CO512499 s13dSG100G080005_114512 Glandular tr... 154 3e-038
gb|CO514428.1|CO514428 s13dSG36E0800065_327516 Glandular tr... 154 3e-038
gb|CO512718.1|CO512718 s13dSG19G0900068_121362 Glandular tr... 153 4e-038
gb|CO514048.1|CO514048 s13dSG72F1200095_156758 Glandular tr... 153 4e-038
gb|CO514565.1|CO514565 s13dSG42C0500038_327790 Glandular tr... 153 4e-038
gb|CO515869.1|CO515869 s13dSG91A1000071_421277 Glandular tr... 153 4e-038
gb|CO512029.1|CO512029 s13dSG18A0500033_108378 Glandular tr... 153 6e-038
gb|CO512498.1|CO512498 s13dSG100G070005_114510 Glandular tr... 153 6e-038
gb|CO513471.1|CO513471 s13dSG10F0400031_130106 Glandular tr... 153 6e-038
gb|CO514079.1|CO514079 s13dSG75A1100081_156820 Glandular tr... 152 8e-038
gb|CO514645.1|CO514645 s13dSG46C1100086_327950 Glandular tr... 151 2e-037
gb|CO515834.1|CO515834 s13dSG54F0300027_421207 Glandular tr... 150 4e-037
gb|CO514357.1|CO514357 s13dSG84E1000071_157376 Glandular tr... 149 5e-037
gb|CO516079.1|CO516079 s13dSG64H1100096_445486 Glandular tr... 149 5e-037
gb|CO516889.1|CO516889 s13dSG58B0300025_468324 Glandular tr... 142 8e-035
gb|CO514701.1|CO514701 s13dSG55A0900069_328062 Glandular tr... 126 7e-030
gb|CO516050.1|CO516050 s13dSG64D1100094_445428 Glandular tr... 109 6e-027
gb|CO516171.1|CO516171 s13dSG67C0500036_445670 Glandular tr... 77 8e-025
gb|CO516372.1|CO516372 s13dSG99H0800074_446072 Glandular tr... 108 1e-024
gb|CO515027.1|CO515027 s13dSG26E0800067_397559 Glandular tr... 107 3e-024
>gb|CO512437.1|CO512437 s13dSG80H0600048_114388 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 598
Score = 111 bits (238), Expect(2) = 1e-042
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +3 / +2
Query: 330 YLSSGDGDGHDEIDMEFMGNASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 509
Y S GD HDEID EF+GN SG P +++TN++A G G KE QF LWFDP+ D+HTY+I+
Sbjct: 353 YYLSSLGDAHDEIDFEFLGNLSGDPYIIHTNIYAQGKGNKEQQFYLWFDPTKDFHTYSIL 532
Query: 510 WNPTNI 527
WNP +I
Sbjct: 533 WNPQSI 550
Score = 77.6 bits (163), Expect(2) = 1e-042
Identities = 28/51 (54%), Positives = 43/51 (84%)
Frame = +3 / +2
Query: 189 SGQEVAMLSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSS 341
+ +++ LSLD++SG+GF SK +YL+G+ +Q+KL+PGNSAGTV+ +YLSS
Sbjct: 215 NNRQLLTLSLDKASGSGFRSKNEYLFGKIDMQLKLVPGNSAGTVTTYYLSS 367
>gb|CO513964.1|CO513964 s13dSG71F1200095_156590 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 592
Score = 106 bits (227), Expect(2) = 5e-041
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +3 / +1
Query: 330 YLSSGDGDGHDEIDMEFMGNASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 509
Y S G DEID EF+GN SG+P L+TNV++ G G +E QF LWFDP+AD+HTY+I+
Sbjct: 358 YYLSSKGSNWDEIDFEFLGNVSGEPYTLHTNVFSQGKGNREQQFHLWFDPTADFHTYSIL 537
Query: 510 WNPTNI 527
WNP I
Sbjct: 538 WNPQRI 555
Score = 76.7 bits (161), Expect(2) = 5e-041
Identities = 28/48 (58%), Positives = 40/48 (83%)
Frame = +3 / +1
Query: 198 EVAMLSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSS 341
++ LSLD++SG+GF SK +YL+G +Q+KL+PGNSAGTV+ +YLSS
Sbjct: 229 QLLTLSLDKASGSGFQSKNEYLFGNIDMQLKLVPGNSAGTVTAYYLSS 372
>gb|CO512499.1|CO512499 s13dSG100G080005_114512 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 590
Score = 154 bits (330), Expect = 3e-038
Identities = 57/106 (53%), Positives = 81/106 (76%)
Frame = +3 / +3
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 237 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 416
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TNV+A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 417 RTGQPYTVQTNVYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 554
>gb|CO514428.1|CO514428 s13dSG36E0800065_327516 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 637
Score = 154 bits (330), Expect = 3e-038
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +3 / +1
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 226 LTLDQGSGCGFGSKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGN 405
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 406 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 543
>gb|CO512718.1|CO512718 s13dSG19G0900068_121362 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 562
Score = 153 bits (329), Expect = 4e-038
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +3 / +1
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 220 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 399
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 400 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 537
>gb|CO514048.1|CO514048 s13dSG72F1200095_156758 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 573
Score = 153 bits (329), Expect = 4e-038
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +3 / +2
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 239 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 418
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 419 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 556
>gb|CO514565.1|CO514565 s13dSG42C0500038_327790 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 611
Score = 153 bits (329), Expect = 4e-038
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +3 / +1
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 217 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 396
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 397 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 534
>gb|CO515869.1|CO515869 s13dSG91A1000071_421277 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 536
Score = 153 bits (329), Expect = 4e-038
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +3 / +3
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 219 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 398
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 399 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 536
>gb|CO512029.1|CO512029 s13dSG18A0500033_108378 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 591
Score = 153 bits (328), Expect = 6e-038
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +3 / +1
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 226 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGN 405
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 406 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 543
>gb|CO512498.1|CO512498 s13dSG100G070005_114510 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 579
Score = 153 bits (328), Expect = 6e-038
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +3 / +1
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 226 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGN 405
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 406 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 543
>gb|CO513471.1|CO513471 s13dSG10F0400031_130106 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 599
Score = 153 bits (328), Expect = 6e-038
Identities = 56/106 (52%), Positives = 81/106 (76%)
Frame = +3 / +2
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 191 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGN 370
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 371 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 508
>gb|CO514079.1|CO514079 s13dSG75A1100081_156820 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 538
Score = 152 bits (327), Expect = 8e-038
Identities = 55/102 (53%), Positives = 79/102 (77%)
Frame = +3 / +1
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 223 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGN 402
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWN 515
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN
Sbjct: 403 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWN 528
>gb|CO514645.1|CO514645 s13dSG46C1100086_327950 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 572
Score = 151 bits (325), Expect = 2e-037
Identities = 56/106 (52%), Positives = 80/106 (75%)
Frame = +3 / +2
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 236 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 415
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD HTY+I+WN +I
Sbjct: 416 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADXHTYSILWNHHHI 553
>gb|CO515834.1|CO515834 s13dSG54F0300027_421207 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 540
Score = 150 bits (322), Expect = 4e-037
Identities = 54/101 (53%), Positives = 78/101 (77%)
Frame = +3 / +3
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 237 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 416
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 512
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+W
Sbjct: 417 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILW 539
>gb|CO514357.1|CO514357 s13dSG84E1000071_157376 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 534
Score = 149 bits (321), Expect = 5e-037
Identities = 54/102 (52%), Positives = 78/102 (76%)
Frame = +3 / +3
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGT + FY++S DE+D EF+GN
Sbjct: 219 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTGTAFYMNSDTDSVRDELDFEFLGN 398
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWN 515
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN
Sbjct: 399 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWN 524
>gb|CO516079.1|CO516079 s13dSG64H1100096_445486 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 576
Score = 149 bits (321), Expect = 5e-037
Identities = 55/106 (51%), Positives = 80/106 (75%)
Frame = +3 / +2
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG G SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 236 LTLDQGSGCGSASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 415
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNPTNI 527
+GQP + TN++A G G +E + +LWFDPSAD+HTY+I+WN +I
Sbjct: 416 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYSILWNHHHI 553
>gb|CO516889.1|CO516889 s13dSG58B0300025_468324 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 514
Score = 142 bits (305), Expect = 8e-035
Identities = 52/98 (53%), Positives = 75/98 (76%)
Frame = +3 / +3
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 219 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 398
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYT 503
+GQP + TN++A G G +E + +LWFDPSAD+HTY+
Sbjct: 399 RTGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYS 512
>gb|CO514701.1|CO514701 s13dSG55A0900069_328062 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 515
Score = 126 bits (269), Expect = 7e-030
Identities = 47/93 (50%), Positives = 69/93 (74%)
Frame = +3 / +2
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ F+++S DE+D EF+GN
Sbjct: 236 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFHMNSDTDSVRDELDFEFLGN 415
Query: 390 ASGQPVVLNTNVWASGDGKKEHQFDLWFDPSAD 488
+GQP + TN++A G G +E + + WFDPSAD
Sbjct: 416 RTGQPYTVQTNIYAHGKGDREQRVNHWFDPSAD 514
>gb|CO516050.1|CO516050 s13dSG64D1100094_445428 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 498
Score = 109 bits (232), Expect(2) = 6e-027
Identities = 41/81 (50%), Positives = 60/81 (74%)
Frame = +3 / +2
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 218 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDSVRDELDFEFLGN 397
Query: 390 ASGQPVVLNTNVWASGDGKKE 452
+GQP + TN++A G G +E
Sbjct: 398 RTGQPYTVQTNIYAHGKGDRE 460
Score = 26.7 bits (52), Expect(2) = 6e-027
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3 / +1
Query: 462 DLWFDPSADY 491
+LWFDPSAD+
Sbjct: 469 NLWFDPSADF 498
>gb|CO516171.1|CO516171 s13dSG67C0500036_445670 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 453
Score = 76.7 bits (161), Expect(2) = 8e-025
Identities = 28/48 (58%), Positives = 41/48 (85%)
Frame = +3 / +3
Query: 198 EVAMLSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSS 341
++ LSLD++SG+GF SK +YL+G+ +Q+KL+PGNSAGTV+ +YLSS
Sbjct: 225 QLLTLSLDKASGSGFRSKNEYLFGKIDMQLKLVPGNSAGTVTTYYLSS 368
Score = 51.9 bits (107), Expect(2) = 8e-025
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +3 / +3
Query: 330 YLSSGDGDGHDEIDMEFMGNASGQPVVLNTNVW 428
Y S GD HDEID EF+GN SG P +++TN++
Sbjct: 354 YYLSSLGDSHDEIDFEFLGNLSGDPYIIHTNIY 452
>gb|CO516372.1|CO516372 s13dSG99H0800074_446072 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 464
Score = 108 bits (231), Expect = 1e-024
Identities = 41/81 (50%), Positives = 60/81 (74%)
Frame = +3 / +3
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 222 LTLDQGSGCGFASKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGN 401
Query: 390 ASGQPVVLNTNVWASGDGKKE 452
+GQP + TN++A G G +E
Sbjct: 402 RTGQPYTVQTNIYAHGKGDRE 464
>gb|CO515027.1|CO515027 s13dSG26E0800067_397559 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 466
Score = 107 bits (228), Expect = 3e-024
Identities = 40/80 (50%), Positives = 59/80 (73%)
Frame = +3 / +1
Query: 210 LSLDRSSGAGFNSKKQYLYGEFSVQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGN 389
L+LD+ SG GF SK +YL+G S+++KL+PG+SAGTV+ FY++S DE+D EF+GN
Sbjct: 226 LTLDQGSGCGFGSKVKYLFGRVSMKIKLVPGDSAGTVTAFYMNSDTDTVRDELDFEFLGN 405
Query: 390 ASGQPVVLNTNVWASGDGKK 449
+GQP + TN++A G G +
Sbjct: 406 RTGQPYTVQTNIYAHGKGDR 465
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,265,184
Number of Sequences: 7669
Number of extensions: 20423
Number of successful extensions: 645
Number of sequences better than 1.0e-020: 25
length of database: 1,248,568
effective HSP length: 41
effective length of database: 934,139
effective search space used: 125174626
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)