TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829483.2.1
(1069 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO512932.1|CO512932 s13dSG86E0600039_121790 Glandular tr... 55 9e-032
gb|CO515733.1|CO515733 s13dSG77B1200101_419615 Glandular tr... 51 2e-030
gb|CO512672.1|CO512672 s13dSG19C0200006_121270 Glandular tr... 52 6e-029
gb|CO512411.1|CO512411 s13dSG80F0100011_114336 Glandular tr... 69 1e-026
gb|CO516002.1|CO516002 s13dSG61G0700056_445332 Glandular tr... 57 5e-026
gb|CO512266.1|CO512266 s13dSG03H1100092_114046 Glandular tr... 68 6e-026
gb|CO512017.1|CO512017 s13dSG07H0100016_103934 Glandular tr... 69 1e-025
gb|CO513935.1|CO513935 s13dSG71D0500042_156532 Glandular tr... 69 1e-025
gb|CO512012.1|CO512012 s13dSG07G0600052_103924 Glandular tr... 68 8e-025
gb|AJ888486.1|AJ888486 AJ888486 Medicago sativa subsp. x va... 70 2e-024
gb|CO516448.1|CO516448 s13dSG28A0500034_446224 Glandular tr... 56 7e-024
gb|CO512339.1|CO512339 s13dSG68G0900068_114192 Glandular tr... 56 2e-023
gb|CO516142.1|CO516142 s13dSG65H0600060_445612 Glandular tr... 52 3e-023
gb|CO513560.1|CO513560 s13dSG12H0800064_139902 Glandular tr... 59 1e-022
gb|CO511777.1|CO511777 s13dSG01H1100096_103454 Glandular tr... 59 2e-022
gb|CO515660.1|CO515660 s13dSG60C0900070_419469 Glandular tr... 59 7e-022
>gb|CO512932.1|CO512932 s13dSG86E0600039_121790 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 569
Score = 55.1 bits (114), Expect(4) = 9e-032
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAF 271
NPVHKKVPVL+H KP+ ES II++YIDE +
Sbjct: 167 NPVHKKVPVLVHAQKPIAESFIILEYIDETW 259
Score = 48.7 bits (100), Expect(4) = 9e-032
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2 / +2
Query: 473 EGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFD 586
+GK FFGGD++GYLD+ LG + W+ E++ M++ D
Sbjct: 440 KGKKFFGGDNIGYLDLALGWISYWLPVFEEVGSMQIID 553
Score = 46.0 bits (94), Expect(4) = 9e-032
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2 / +2
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++KL+G W SPFV RV+ AL KG+ YE V
Sbjct: 26 GSQDVKLVGFWVSPFVKRVEWALKLKGVDYEYV 124
Score = 37.3 bits (75), Expect(4) = 9e-032
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDKLL 361
LLP P++RA+ARFW + + KLL
Sbjct: 272 LLPQHPYERALARFWADFAEQKLL 343
>gb|CO515733.1|CO515733 s13dSG77B1200101_419615 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 567
Score = 51.0 bits (105), Expect(4) = 2e-030
Identities = 17/29 (58%), Positives = 26/29 (89%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDE 265
NPV++KVPVL+H+GK + ES +I++Y+DE
Sbjct: 179 NPVYRKVPVLVHDGKSISESLVILEYVDE 265
Score = 48.7 bits (100), Expect(4) = 2e-030
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
D L LLG W SPFVLRVK AL KG+ Y+ V
Sbjct: 44 DSLTLLGFWGSPFVLRVKWALELKGIQYQYV 136
Score = 42.8 bits (87), Expect(4) = 2e-030
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2 / +2
Query: 473 EGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFD 586
EG+ +FGG+++G+ D+ +G W E+ G+ L D
Sbjct: 452 EGRRYFGGENIGFADIAVGIFGFWARVIEETVGINLID 565
Score = 40.0 bits (81), Expect(4) = 2e-030
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDK 355
LLP DP++RA ARFW + DDK
Sbjct: 284 LLPHDPYERAKARFWAKFADDK 349
>gb|CO512672.1|CO512672 s13dSG19C0200006_121270 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 565
Score = 52.4 bits (108), Expect(4) = 6e-029
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAF 271
NPVHKKVPVL+H KP+ E II++YIDE +
Sbjct: 221 NPVHKKVPVLVHAQKPIAELFIILEYIDETW 313
Score = 46.0 bits (94), Expect(4) = 6e-029
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2 / +2
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++KL+G W SPFV RV+ AL KG+ YE V
Sbjct: 80 GSQDVKLVGFWVSPFVKRVEWALKLKGVDYEYV 178
Score = 41.8 bits (85), Expect(4) = 6e-029
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 473 EGKPFFGGDSVGYLDVTLGALVAW 544
+GK FFGGD++GYLD+ LG + W
Sbjct: 494 KGKKFFGGDNIGYLDLALGWISYW 565
Score = 37.3 bits (75), Expect(4) = 6e-029
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDKLL 361
LLP P++RA+ARFW + + KLL
Sbjct: 326 LLPQHPYERALARFWADFAEQKLL 397
>gb|CO512411.1|CO512411 s13dSG80F0100011_114336 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 578
Score = 68.9 bits (144), Expect(3) = 1e-026
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSL 292
NPVHKK+PVL+HNGKP+CES + VQYIDE + P L
Sbjct: 217 NPVHKKIPVLIHNGKPICESLVAVQYIDEVWNEKSPLL 330
Score = 41.8 bits (85), Expect(3) = 1e-026
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 290 LLPADPHQRAVARFWGAYIDDKL 358
LLP+DP+QR+ ARFW Y+D K+
Sbjct: 325 LLPSDPYQRSRARFWADYVDKKI 393
Score = 41.4 bits (84), Expect(3) = 1e-026
Identities = 15/29 (51%), Positives = 24/29 (82%)
Frame = +2 / +1
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYE 127
DE+ LL +WASPF +R+++AL+ KG+ +E
Sbjct: 82 DEVILLDSWASPFGMRLRIALAEKGIKHE 168
>gb|CO516002.1|CO516002 s13dSG61G0700056_445332 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 482
Score = 56.5 bits (117), Expect(3) = 5e-026
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAF 271
NPVHKKVPV +HN KP+ ES +I++YIDE +
Sbjct: 207 NPVHKKVPVFVHNEKPISESLVILEYIDEVW 299
Score = 50.1 bits (103), Expect(3) = 5e-026
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +2 / +3
Query: 290 LLPADPHQRAVARFWGAYIDDKLLA 364
+LP+DPHQRA+ARFW +IDDK+++
Sbjct: 312 ILPSDPHQRALARFWSKFIDDKIVS 386
Score = 43.7 bits (89), Expect(3) = 5e-026
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2 / +3
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYE 127
+ +KLLGA SPFV RV++AL KG+ YE
Sbjct: 72 EHVKLLGATGSPFVCRVQIALKLKGIEYE 158
>gb|CO512266.1|CO512266 s13dSG03H1100092_114046 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 573
Score = 68.0 bits (142), Expect(3) = 6e-026
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSL 292
NPVHKK+PVL+HNGKP+CES I QYIDE + P L
Sbjct: 225 NPVHKKIPVLIHNGKPICESLIAAQYIDEVWNDKSPLL 338
Score = 42.3 bits (86), Expect(3) = 6e-026
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 290 LLPADPHQRAVARFWGAYIDDKL 358
LLP+DP+QR+ ARFW Y+D K+
Sbjct: 333 LLPSDPYQRSQARFWADYVDKKI 401
Score = 39.6 bits (80), Expect(3) = 6e-026
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2 / +3
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYE 127
DE+ LL W SPF +RV++AL+ KG+ +E
Sbjct: 90 DEVILLDYWVSPFGIRVRIALAEKGIKHE 176
>gb|CO512017.1|CO512017 s13dSG07H0100016_103934 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 553
Score = 69.3 bits (145), Expect(3) = 1e-025
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSL 292
NPVHKK+PVL+HNGKP+CES I VQYIDE + P L
Sbjct: 209 NPVHKKIPVLIHNGKPICESLIAVQYIDEVWNEKSPLL 322
Score = 42.3 bits (86), Expect(3) = 1e-025
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDKL 358
LLP+DP+QR+ ARFW Y+D K+
Sbjct: 317 LLPSDPYQRSQARFWADYVDKKI 385
Score = 37.3 bits (75), Expect(3) = 1e-025
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +2 / +2
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYE 127
+E+ LL W SPF +RV++AL+ KG+ +E
Sbjct: 74 NEVILLDYWVSPFGMRVRIALAEKGIKHE 160
>gb|CO513935.1|CO513935 s13dSG71D0500042_156532 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 415
Score = 69.3 bits (145), Expect(3) = 1e-025
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSL 292
NPVHKK+PVL+HNGKP+CES I VQYIDE + P L
Sbjct: 212 NPVHKKIPVLIHNGKPICESLIAVQYIDEVWNEKSPLL 325
Score = 42.3 bits (86), Expect(3) = 1e-025
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDKL 358
LLP+DP+QR+ ARFW Y+D K+
Sbjct: 320 LLPSDPYQRSQARFWADYVDKKI 388
Score = 37.3 bits (75), Expect(3) = 1e-025
Identities = 14/29 (48%), Positives = 22/29 (75%)
Frame = +2 / +2
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYE 127
+E+ LL W SPF +RV++AL+ KG+ +E
Sbjct: 77 NEVILLDYWVSPFGMRVRIALAEKGIKHE 163
>gb|CO512012.1|CO512012 s13dSG07G0600052_103924 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 506
Score = 67.5 bits (141), Expect(3) = 8e-025
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSL 292
+PVHKK+PVL+HNGKP+CES I VQYIDE + P L
Sbjct: 227 DPVHKKIPVLIHNGKPICESLIAVQYIDEVWNDKSPLL 340
Score = 42.3 bits (86), Expect(3) = 8e-025
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDKL 358
LLP+DP+QR+ ARFW Y+D K+
Sbjct: 335 LLPSDPYQRSQARFWADYVDKKI 403
Score = 36.3 bits (73), Expect(3) = 8e-025
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2 / +2
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYE 127
D + LL W SPF +RV++AL+ KG+ +E
Sbjct: 92 DGVILLDYWVSPFGMRVRIALAEKGIKHE 178
>gb|AJ888486.1|AJ888486 AJ888486 Medicago sativa subsp. x varia 4-day-old Medicago sativa
subsp. x varia cDNA, mRNA sequence
Length = 777
Score = 69.8 bits (146), Expect(3) = 2e-024
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSL 292
NPVHKK+PVL+HNGKP+CES I VQYIDE + P L
Sbjct: 49 NPVHKKIPVLIHNGKPICESLIAVQYIDEVWNDKSPLL 162
Score = 42.3 bits (86), Expect(3) = 2e-024
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2 / +1
Query: 290 LLPADPHQRAVARFWGAYIDDKL 358
LLP+DP+QR+ ARFW Y+D K+
Sbjct: 157 LLPSDPYQRSQARFWADYVDKKI 225
Score = 32.7 bits (65), Expect(3) = 2e-024
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2 / +1
Query: 479 KPFFGGDSVGYLDVTLGALVAWVHAAE 559
+ +FGGD +G++DVTL W + E
Sbjct: 331 RTYFGGDXLGFVDVTLIPFFTWFKSYE 411
>gb|CO516448.1|CO516448 s13dSG28A0500034_446224 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 514
Score = 56.1 bits (116), Expect(3) = 7e-024
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAF 271
NPVHKK+PV +HN KP+ ES +I++YIDE +
Sbjct: 224 NPVHKKIPVFVHNEKPISESLVILEYIDEVW 316
Score = 44.1 bits (90), Expect(3) = 7e-024
Identities = 13/24 (54%), Positives = 22/24 (91%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDKLL 361
+LP+DP+Q+++ARFW +IDDK++
Sbjct: 329 ILPSDPYQKSLARFWSKFIDDKIV 400
Score = 42.8 bits (87), Expect(3) = 7e-024
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2 / +2
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
+++KLLG SPF RV++AL FKG+ YE V
Sbjct: 89 EDVKLLGIVGSPFFCRVQIALKFKGIEYEFV 181
>gb|CO512339.1|CO512339 s13dSG68G0900068_114192 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 515
Score = 56.1 bits (116), Expect(3) = 2e-023
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAF 271
NPVHKK+PV +HN KP+ ES +I++YIDE +
Sbjct: 224 NPVHKKIPVFVHNEKPISESLVILEYIDEVW 316
Score = 44.1 bits (90), Expect(3) = 2e-023
Identities = 13/24 (54%), Positives = 22/24 (91%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDKLL 361
+LP+DP+Q+++ARFW +IDDK++
Sbjct: 329 ILPSDPYQKSLARFWSKFIDDKIV 400
Score = 41.4 bits (84), Expect(3) = 2e-023
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +2
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
+++KLLG SPF RV+ AL FKG+ YE V
Sbjct: 89 EDVKLLGIVGSPFFCRVQTALKFKGIEYEFV 181
>gb|CO516142.1|CO516142 s13dSG65H0600060_445612 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 368
Score = 52.4 bits (108), Expect(3) = 3e-023
Identities = 18/29 (62%), Positives = 26/29 (89%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDE 265
NPV+KKVPVL+H+GK + ES +I++Y+DE
Sbjct: 181 NPVYKKVPVLVHDGKSISESLVILEYVDE 267
Score = 48.3 bits (99), Expect(3) = 3e-023
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 41 DELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
D L LLG W SPFVLRVK AL KG+ Y+ V
Sbjct: 46 DSLTLLGFWGSPFVLRVKWALELKGVQYQYV 138
Score = 40.0 bits (81), Expect(3) = 3e-023
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +1
Query: 290 LLPADPHQRAVARFWGAYIDDK 355
LLP DP++RA ARFW + DDK
Sbjct: 286 LLPHDPYERAKARFWAKFADDK 351
>gb|CO513560.1|CO513560 s13dSG12H0800064_139902 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 585
Score = 59.3 bits (123), Expect(3) = 1e-022
Identities = 21/31 (67%), Positives = 28/31 (90%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAF 271
NPV+KKVPVL+HNGKP+ ES +I++YIDE +
Sbjct: 195 NPVYKKVPVLVHNGKPISESLVILEYIDETW 287
Score = 44.1 bits (90), Expect(3) = 1e-022
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = +2 / +3
Query: 290 LLPADPHQRAVARFWGAYIDDKLL 361
+LP+DP++RA+ARFW +IDDK +
Sbjct: 300 ILPSDPYKRALARFWSKFIDDKCM 371
Score = 39.1 bits (79), Expect(3) = 1e-022
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2 / +3
Query: 485 FFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLF 583
FFGGD +G +D+T + W +++ G++LF
Sbjct: 480 FFGGDEIGLIDITAVFIAXWFPIVQEVTGLKLF 578
>gb|CO511777.1|CO511777 s13dSG01H1100096_103454 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 574
Score = 59.3 bits (123), Expect(3) = 2e-022
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAF 271
NP+HKKVPV +HNGKP+ ES +I++YIDE +
Sbjct: 242 NPIHKKVPVFVHNGKPLAESLVILEYIDETW 334
Score = 40.0 bits (81), Expect(3) = 2e-022
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 290 LLPADPHQRAVARFWGAYIDDKLL 361
+ P P+++A+ARFW +IDDK+L
Sbjct: 347 IFPQQPYEKALARFWSRFIDDKIL 418
Score = 38.6 bits (78), Expect(3) = 2e-022
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 44 ELKLLGAWASPFVLRVKLALSFKGLSY 124
E++LLG SPFV RV++AL KG+ Y
Sbjct: 110 EVQLLGVGGSPFVRRVQIALKLKGIEY 190
>gb|CO515660.1|CO515660 s13dSG60C0900070_419469 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 532
Score = 59.3 bits (123), Expect(3) = 7e-022
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAF 271
NP+HKKVPV +HNGKP+ ES +I++YIDE +
Sbjct: 241 NPIHKKVPVFVHNGKPLAESLVILEYIDETW 333
Score = 38.6 bits (78), Expect(3) = 7e-022
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 44 ELKLLGAWASPFVLRVKLALSFKGLSY 124
E++LLG SPFV RV++AL KG+ Y
Sbjct: 109 EVQLLGVGGSPFVRRVQIALKLKGIEY 189
Score = 38.2 bits (77), Expect(3) = 7e-022
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2 / +1
Query: 290 LLPADPHQRAVARFWGAYIDDKLL 361
+ P P+ +A+ARFW +IDDK+L
Sbjct: 346 IFPQQPYGKALARFWSRFIDDKIL 417
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 7,790,310
Number of Sequences: 7669
Number of extensions: 105734
Number of successful extensions: 1188
Number of sequences better than 1.0e-020: 18
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 286665912
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)