TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3712941.2.1
(1473 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|Y11348.1|MSNANN M.sativa mRNA for annexin-like protein 343 e-127
emb|X74947.1|MSANN M.sativa mRNA for annexin 110 5e-058
gb|CO517275.1|CO517275 s13dSG32H1100096_486146 Glandular tr... 175 1e-044
gb|CO511909.1|CO511909 s13dSG05D0900078_103718 Glandular tr... 100 5e-029
gb|CO516777.1|CO516777 s13dSG94C1200098_446882 Glandular tr... 98 2e-028
gb|CO517024.1|CO517024 s13dSG31B1000079_468594 Glandular tr... 95 2e-027
gb|CO514156.1|CO514156 s13dSG75H1000080_156974 Glandular tr... 94 1e-026
gb|CO511849.1|CO511849 s13dSG02F1200103_103598 Glandular tr... 90 3e-026
gb|CO512301.1|CO512301 s13dSG68D0200014_114116 Glandular tr... 93 1e-024
gb|CO513636.1|CO513636 s13dSG17A0100001_140054 Glandular tr... 83 5e-024
gb|CO515484.1|CO515484 s13dSG52B0200025_418027 Glandular tr... 80 3e-023
gb|CO517015.1|CO517015 s13dSG31A1000071_468576 Glandular tr... 79 6e-023
>emb|Y11348.1|MSNANN M.sativa mRNA for annexin-like protein
Length = 1533
Score = 343 bits (744), Expect(3) = e-127
Identities = 143/205 (69%), Positives = 169/205 (82%)
Frame = +3 / +2
Query: 339 LRAATEIICSRTPSQLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPE 518
L AATE+ICSRTPSQLQ +KQ Y+++FG YLEH+I +TSGDHQK+LL Y+ PR+EG E
Sbjct: 416 LEAATEVICSRTPSQLQYLKQLYHSKFGVYLEHEIELNTSGDHQKILLRYLTTPRHEGLE 595
Query: 519 VDPTIVTHDAKDLYKAGEKRLGTDEKIFIRVFTERSWAHLASVSSAYHHMYDRKLEKVIK 698
V+ I DAK LYKAGEK+LGTDEK F+++F+ERS AHLA+VSS YH MY L+K +K
Sbjct: 596 VNREIAQKDAKVLYKAGEKKLGTDEKTFVQIFSERSSAHLAAVSSYYHDMYGHSLKKAVK 775
Query: 699 SETSGNFEFALLTILRCAENPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKA 878
+E SGNF ALLTI CA NPAKYFAK+L KAMKGLGT+D TLIRV+VTRTEIDMQYIKA
Sbjct: 776 NEASGNFGLALLTITECATNPAKYFAKVLYKAMKGLGTNDSTLIRVIVTRTEIDMQYIKA 955
Query: 879 EYLKKYKKPLAEAINSETSGNYRTF 953
EY KKYKK L +A++SETSGNYR F
Sbjct: 956 EYAKKYKKTLNDAVHSETSGNYRIF 1030
Score = 237 bits (513), Expect(3) = 7e-075
Identities = 119/206 (57%), Positives = 139/206 (67%)
Frame = -3 / -1
Query: 955 RNVR*FPDVSELIASANGFLYFFKYSALIYCMSISVLVTTTLISVMSSVPKPFMAFRKSL 776
+ + * PDVSE AS + FLYFF YSALIYC+SISVLVT TL+SV+S VPKPF+A +
Sbjct: 1032 KKIL*LPDVSE*TASFSVFLYFFAYSALIYCISISVLVTMTLMSVLSLVPKPFIALYNTF 853
Query: 775 AKYFAGFSAHLRIVKSANSKFPEVSLLITFSNFRSYI*W*AEETDAKCAQLRSVKTRIKI 596
AKYFAG AH IVKSA KFP+ S F N Y+ * E T AKCA LRS+ +
Sbjct: 852 AKYFAGLVAHSVIVKSARPKFPDASFFTAFFNE*PYMS**YELTAAKCALLRSLNIWTNV 673
Query: 595 FSSVPSLFSPALYKSFASCVTIVGSTSGPS*RGIPIYASKSFW*SPDVW*AMSCSR*VPN 416
FSSVPS FSPALY++FAS I TS PS RG+ Y SK F *SP+V+ ++SCSR* PN
Sbjct: 672 FSSVPSFFSPALYRTFASF*AISLLTSRPSCRGVVKYLSKIF**SPEVFNSISCSR*TPN 493
Query: 415 LA**VCFIICNCDGVLEHIISVAALR 338
CF C+ DGV EHI SVAA R
Sbjct: 492 FEWYNCFRYCSWDGVREHITSVAASR 415
Score = 131 bits (280), Expect(2) = 4e-034
Identities = 70/172 (40%), Positives = 96/172 (55%)
Frame = -2 / -3
Query: 863 HVNLGPRHHHPYKCHVISA*TFHGLS*ELSKILCWVFRASEDSQKCKFKVSRSFALDNLL 684
H+NL P ++ PY+C +IS *TFH L L KILCW+ QKC+ ++ F L LL
Sbjct: 940 HINLSPCYNDPYECAIISP*TFHCLIQHLCKILCWISSTFSYCQKCETEIPGCFILYCLL 761
Query: 683 *FPVIHMMVSRRNRCQVCPTAFSENTDKNLLVRTQPFLTSFVQILCIMCHNCRINLGTFI 504
IH+M+ R + Q+ F+E DK L + +Q L SFVQ LCI+ N INL F+
Sbjct: 760 Q*VTIHVMIIRTDGSQMRAAPFTEYLDKCLFIGSQFLLPSFVQNLCILLSNFSINLEAFV 581
Query: 503 AWNPHICK*KLLVITGCVVSNVMLKISTESSIISLFHYLQL*WCPGTYNLSG 348
+ I K LL+I+G V + MLKI+ + ++ LF L L W TY G
Sbjct: 580 SRGG*IPKQDLLMISGSV*FDFMLKINAKL*MV*LF*IL*LGWSTRTYYFRG 425
Score = 104 bits (221), Expect = 4e-023
Identities = 74/202 (36%), Positives = 103/202 (50%)
Frame = +2 / +1
Query: 344 SSH*DYMFQDTITVANNETDLLC*IRYLS*A*HCSPHIR*SPEAFTCIYGDSTL*RSRG* 523
S H MF +I ++T + + LS*A*+ H R S + ++ + R RG*
Sbjct: 421 SGHGSNMFAYSIPTTISKTVIPFKVWRLS*A*NRIKHFRRSSKDLA*VFNHPSTRRPRG* 600
Query: 524 SYNCDT*CKGFVQSW*EKAGYGREDFYPCFH*TQLGTLGICFFCLPSYV*PEIREGYQER 703
NC CKG VQSW E+ G +D P *T+ G F L +V I EG +E
Sbjct: 601 *RNCSKGCKGSVQSWGEETGNR*KDICPNIQ*TEQRAFGCRQFVLS*HVWSLIEEGSKE* 780
Query: 704 NFWKL*ICTFDYPQMRGKPSKVFC*ALTKGHERFRH**HDTYKGGGDEDRD*HAIYQGRV 883
+ + TFD M SKVFC + G+ERFR ** T+KG ++D D*+A+YQ +
Sbjct: 781 SIREFRSRTFDNN*MCY*SSKVFCKGVV*GNERFRD***HTHKGHCNKD*D*YAVYQS*I 960
Query: 884 LEEV*EAIS*GYQLRDIRKLSD 949
+E+ E * L +IR+L D
Sbjct: 961 CKEIQENTE*CSSL*NIRQLQD 1026
Score = 94.1 bits (199), Expect(3) = e-127
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +2 / +2
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEYRVYVS 205
MA+L LPP PP+PR DA+ L++AFKGFGCD+T INIL HRD+ QR +QQEY+ S
Sbjct: 113 MATLILPPIPPSPRDDAMQLYRAFKGFGCDTTAVINILAHRDATQRAYLQQEYKATYS 286
Score = 52.4 bits (108), Expect(3) = e-127
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3 / +2
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREAL 320
Y EELS R+ SEL G + A+ LW+ DPA RDA ++R++L
Sbjct: 281 YSEELSKRLVSELKGKLETAVLLWLPDPAARDAEIIRKSL 400
Score = 42.3 bits (86), Expect(3) = 7e-075
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = -1 / -1
Query: 192 LYSC*MSPRCPESR*VSMFIPVVLSHPNPLKALWRSMAS 76
LYSC RC S * + I V+SHPNPLKA MAS
Sbjct: 273 LYSCWR*ARCVASL*ARILITAVVSHPNPLKAR*SCMAS 157
Score = 35.4 bits (71), Expect(3) = 7e-075
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = -3 / -1
Query: 358 ISVAALRSIVSPFRASLKTVASRPAGSRIHSDIAFLWFPLSSDEIRWESSS*YI 197
I+ A ++S L ASR AGS S A FPLSS+ R++SSS Y+
Sbjct: 438 ITSVAASRLLSTTSDFLMISASRAAGSGNQSRTAVSNFPLSSETKRFDSSSEYV 277
Score = 33.6 bits (67), Expect(2) = 4e-034
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -3 / -3
Query: 190 VFLLNESTLPRIAMSKYVYPCCTVTSKPFEGLVEVDGVLA 71
VFLL TL ++MSK + VT K F+ V++ G+++
Sbjct: 271 VFLLEVGTLCSVSMSKNIDHSSCVTPKSFKSTVKLHGIIS 152
>emb|X74947.1|MSANN M.sativa mRNA for annexin
Length = 1182
Score = 110 bits (235), Expect(3) = 5e-058
Identities = 52/119 (43%), Positives = 73/119 (61%)
Frame = +3 / +2
Query: 207 EELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPSQL 386
E+L + ELS + +KA+ LW LDPA RDA + +A T + EI +R+P +L
Sbjct: 155 EDLLKDLDKELSSDFEKAVLLWTLDPAERDAFLANQATKMLTSNNSIIVEIASTRSPLEL 334
Query: 387 QIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLYK 563
KQ Y RF LE D+A+HTSGD +KLL+ +GI RYEG EV+ T+ +AK L++
Sbjct: 335 LKAKQAYQVRFKKSLEEDVAYHTSGDIRKLLVPLVGIHRYEGDEVNMTLAKSEAKLLHE 511
Score = 105 bits (225), Expect(3) = 5e-058
Identities = 47/129 (36%), Positives = 78/129 (60%)
Frame = +3 / +2
Query: 603 IRVFTERSWAHLASVSSAYHHMYDRKLEKVIKSETSGNFEFALLTILRCAENPAKYFAKL 782
IR+ T RS A L + + Y++ + ++K +++++ + L ++ P KYF +L
Sbjct: 548 IRIVTTRSKAQLNATLNHYNNEFGNVIDKDLETDSDDEYLKLLRAAIKGLTYPEKYFEEL 727
Query: 783 LRKAMKGLGTDDMTLIRVVVTRTEIDMQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLS 962
LR A+ +GTD+ L RVV TR E+D+Q I EY ++ PL AI+ +TSG+Y+ LL+
Sbjct: 728 LRLAINKMGTDENALTRVVTTRAEVDLQRIAEEYQRRNSVPLDRAIDKDTSGDYQKILLA 907
Query: 963 LVGHGH*AM 989
L+GH * +
Sbjct: 908 LMGHDE*VL 934
Score = 67.0 bits (140), Expect(2) = 7e-021
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = -3 / -1
Query: 970 PTSERRNVR*FPDVSELIASANGFLYFFKYSALIYCMSISVLVTTTLISVMSSVPKPFMA 791
P S RR * P+VS IA + G L+ YS+ I C S S LV TTL+ SSVP F+A
Sbjct: 915 PISARRIF**SPEVSLSIARSRGTLFLLWYSSAIRCKSTSALVVTTLVRAFSSVPILFIA 736
Query: 790 FRKSLAKYFAG 758
+S +KYF+G
Sbjct: 735 SLRSSSKYFSG 703
Score = 52.8 bits (109), Expect(2) = 7e-021
Identities = 40/100 (40%), Positives = 48/100 (48%)
Frame = -3 / -1
Query: 553 SFASCVTIVGSTSGPS*RGIPIYASKSFW*SPDVW*AMSCSR*VPNLA**VCFIICNCDG 374
+ AS V TS PS*R +P +KS SP+V *A S SR * CF + + G
Sbjct: 501 NLASDFANVMFTSSPS*RCMPTRGTKSLRMSPEV**ATSSSRDFLKRT*YACFALRSSSG 322
Query: 373 VLEHIISVAALRSIVSPFRASLKTVASRPAGSRIHSDIAF 254
L IS V+ A L ASR AGS +HS AF
Sbjct: 321 DLVEAISTMIELFEVNILVA*LAKNASRSAGSNVHSSTAF 202
Score = 42.3 bits (86), Expect(3) = 5e-058
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2 / +2
Query: 62 PNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
P+P +D+ L AF+G+G + I+IL HR++ QR I++ Y
Sbjct: 11 PSPSEDSEQLRGAFQGWGTNEGLIISILAHRNAAQRKSIRETY 139
>gb|CO517275.1|CO517275 s13dSG32H1100096_486146 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 628
Score = 175 bits (376), Expect = 1e-044
Identities = 72/97 (74%), Positives = 88/97 (90%)
Frame = +3 / -1
Query: 681 LEKVIKSETSGNFEFALLTILRCAENPAKYFAKLLRKAMKGLGTDDMTLIRVVVTRTEID 860
L+K IK+ETSGNF ALLTI++CAE+PAKYFAK+LR+AMKGLGTDD L+RV+VTR+EID
Sbjct: 625 LKKAIKNETSGNFAHALLTIVQCAESPAKYFAKVLRRAMKGLGTDDTKLMRVIVTRSEID 446
Query: 861 MQYIKAEYLKKYKKPLAEAINSETSGNYRTFLLSLVG 971
+ YIKAEYLKKYKK L +A++SETSG+YR FLLSL+G
Sbjct: 445 LHYIKAEYLKKYKKTLNDAVHSETSGHYRAFLLSLLG 335
Score = 142 bits (305), Expect = 9e-035
Identities = 65/100 (65%), Positives = 75/100 (75%)
Frame = -3 / +3
Query: 979 WP*PTSERRNVR*FPDVSELIASANGFLYFFKYSALIYCMSISVLVTTTLISVMSSVPKP 800
W P SERR *+PDVSE AS + FLYFFKYSA I C SIS+LVT TLIS +SSVP+P
Sbjct: 327 WLGPKSERRKAL*WPDVSE*TASFSVFLYFFKYSAFI*CRSISLLVTITLISFVSSVPRP 506
Query: 799 FMAFRKSLAKYFAGFSAHLRIVKSANSKFPEVSLLITFSN 680
F+A R++ AKYFAG SAH IVKSA +KFP+VS I F N
Sbjct: 507 FIALRRTFAKYFAGLSAHWTIVKSA*AKFPDVSFFIAFFN 626
>gb|CO511909.1|CO511909 s13dSG05D0900078_103718 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 565
Score = 99.6 bits (211), Expect(2) = 5e-029
Identities = 46/119 (38%), Positives = 69/119 (57%)
Frame = +3 / +1
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LW L+ A RDA + EA T + E+ C+R+
Sbjct: 202 YEEDLIKALNKELTSDFERLVHLWTLESAERDAFLANEATKRWTSSNQVLVELACTRSSD 381
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDL 557
QL K+ Y+A LE D+A+HT+GD +KLLL + RYEG EV+ TI +AK L
Sbjct: 382 QLFFAKKAYHALHKKSLEEDVAYHTTGDFRKLLLPLVSSYRYEGDEVNLTIAKAEAKIL 558
Score = 43.7 bits (89), Expect(2) = 5e-029
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2 / +1
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++L++P P D L KAF G+G + I+IL HR+ QR +I++ Y
Sbjct: 34 MSTLSVPHPLPPVSDDVEQLRKAFSGWGTNEDLIISILGHRNEVQRKVIREAY 192
>gb|CO516777.1|CO516777 s13dSG94C1200098_446882 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 554
Score = 97.7 bits (207), Expect(2) = 2e-028
Identities = 46/121 (38%), Positives = 70/121 (57%)
Frame = +3 / +3
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LW L+ A RDA + EA T + E+ C+R+
Sbjct: 192 YEEDLIKALNKELTCDFERLVHLWTLESAERDAFLANEATKRWTSSNQVLVELACTRSSD 371
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIVTHDAKDLY 560
QL K+ Y+A LE D+A+HT+GD +KLLL + RYEG EV TI +AK L+
Sbjct: 372 QLFFAKKAYHALHKKSLEEDVAYHTTGDFRKLLLLLVSSYRYEGDEVILTIAKAEAKILH 551
Query: 561 K 563
+
Sbjct: 552 E 554
Score = 43.7 bits (89), Expect(2) = 2e-028
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2 / +3
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++L++P P D L KAF G+G + I+IL HR+ QR +I++ Y
Sbjct: 24 MSTLSVPHPLPPVSDDVEQLRKAFSGWGTNEDLIISILGHRNEVQRKVIREAY 182
>gb|CO517024.1|CO517024 s13dSG31B1000079_468594 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 544
Score = 94.5 bits (200), Expect(2) = 2e-027
Identities = 43/112 (38%), Positives = 65/112 (58%)
Frame = +3 / +3
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LW L+ A RDA + EA T + E+ C+R+
Sbjct: 201 YEEDLIKALNKELTSDFERLVHLWTLESAERDAFLANEATKRWTSSNQVLVELACTRSSD 380
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTIV 536
QL K+ Y+A LE D+A+HT+GD +KLLL + RY G EV+ TIV
Sbjct: 381 QLFFAKKAYHALHKKSLEEDVAYHTTGDFRKLLLPLVSSYRYXGDEVNLTIV 536
Score = 43.7 bits (89), Expect(2) = 2e-027
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2 / +3
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++L++P P D L KAF G+G + I+IL HR+ QR +I++ Y
Sbjct: 33 MSTLSVPHPLPPVSDDVEQLRKAFSGWGTNEDLIISILGHRNEVQRKVIREAY 191
>gb|CO514156.1|CO514156 s13dSG75H1000080_156974 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 526
Score = 93.6 bits (198), Expect(2) = 1e-026
Identities = 42/110 (38%), Positives = 64/110 (58%)
Frame = +3 / +1
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LW L+ A RDA + EA T + E+ C+R+
Sbjct: 196 YEEDLIKALNKELTSDFERLVHLWTLESAERDAFLANEATKRWTSSNQVLVELACTRSSD 375
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPT 530
QL K+ Y+A LE D+A+HT+GD +KLLL + RYEG EV+ T
Sbjct: 376 QLFFAKKAYHALHKKSLEEDVAYHTTGDFRKLLLPLVSSYRYEGDEVNLT 525
Score = 41.4 bits (84), Expect(2) = 1e-026
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2 / +1
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++L++P P D L KAF G+G + I+IL HR+ QR +I+ Y
Sbjct: 28 MSTLSVPHPLPPVSDDVEQLRKAFSGWGTNEGLIISILGHRNEVQRKVIRGAY 186
>gb|CO511849.1|CO511849 s13dSG02F1200103_103598 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 558
Score = 90.4 bits (191), Expect(2) = 3e-026
Identities = 40/106 (37%), Positives = 61/106 (57%)
Frame = +3 / +3
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LW L+ A RDA + EA T + E+ C+R+
Sbjct: 240 YEEDLIKALNKELTSDFERLVHLWTLESAERDAFLANEATKRWTSSNQVLVELACTRSSD 419
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPE 518
QL K+ Y+A LE D+A+HT+GD +KLLL + RYEG E
Sbjct: 420 QLFFAKKAYHALHKKSLEEDVAYHTTGDFRKLLLPLVSSYRYEGDE 557
Score = 43.2 bits (88), Expect(2) = 3e-026
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2 / +3
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++L++P P D L KAF G+G + I+IL HR+ QR +I++ Y
Sbjct: 72 MSTLSVPHPLPPVSDDVEQLRKAFSGWGTNEGLIISILGHRNEVQRKVIREAY 230
>gb|CO512301.1|CO512301 s13dSG68D0200014_114116 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 547
Score = 92.7 bits (196), Expect(2) = 1e-024
Identities = 42/111 (37%), Positives = 65/111 (58%)
Frame = +3 / +3
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LW L+ A RDA + EA T + E+ C+R+
Sbjct: 201 YEEDLIKALNKELTSDFERLVHLWTLESAERDAFLANEATKRWTSSNQVLVELACTRSSD 380
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLLAYMGIPRYEGPEVDPTI 533
QL K+ Y+A LE D+A++T+GD +KLLL + RYEG EV+ TI
Sbjct: 381 QLFFAKKAYHALHKKSLEEDVAYYTTGDFRKLLLPLVSSYRYEGDEVNLTI 533
Score = 35.9 bits (72), Expect(2) = 1e-024
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2 / +3
Query: 77 DAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
D L KAF G+G + I+IL HR+ QR +I++ Y
Sbjct: 78 DVEQLRKAFSGWGTNEGLIISILGHRNEVQRKVIREAY 191
>gb|CO513636.1|CO513636 s13dSG17A0100001_140054 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 496
Score = 83.1 bits (175), Expect(2) = 5e-024
Identities = 36/94 (38%), Positives = 56/94 (59%)
Frame = +3 / +1
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LWIL+ A RDA + EA T + E+ C+R+
Sbjct: 196 YEEDLIKALNKELASDFERLVHLWILESAERDAFLANEATKRWTSSNQVLVELACTRSSD 375
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLL 482
QL K+ Y+A LE D+A+HT+GD +KLLL
Sbjct: 376 QLFFAKKAYHALHKKSLEEDVAYHTTGDFRKLLL 477
Score = 43.2 bits (88), Expect(2) = 5e-024
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2 / +1
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++L++P P D L KAF G+G + I+IL HR+ QR +I++ Y
Sbjct: 28 MSTLSVPHPLPPVSDDVEQLRKAFSGWGTNEGLIISILGHRNEVQRKVIREAY 186
>gb|CO515484.1|CO515484 s13dSG52B0200025_418027 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 501
Score = 80.3 bits (169), Expect(2) = 3e-023
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +3 / +2
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LW L+ A RDA + EA T + E+ C+R+
Sbjct: 212 YDEDLIKALNKELTSDFERLVHLWTLESAERDAFLANEATKRWTSSNQVLVELACTRSSD 391
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLLL 482
QL K+ Y+A LE D+A+HT+GD +KLLL
Sbjct: 392 QLFFAKKAYHALHKKSLEEDVAYHTTGDFRKLLL 493
Score = 43.2 bits (88), Expect(2) = 3e-023
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2 / +2
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++L++P P D L KAF G+G + I+IL HR+ QR +I++ Y
Sbjct: 44 MSTLSVPHPLPPVSDDVEQLRKAFSGWGTNEGLIISILGHRNEVQRKVIREAY 202
>gb|CO517015.1|CO517015 s13dSG31A1000071_468576 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 479
Score = 79.0 bits (166), Expect(2) = 6e-023
Identities = 34/93 (36%), Positives = 54/93 (58%)
Frame = +3 / +3
Query: 201 YHEELSHRISSELSGNHKKAMSLWILDPAGRDATVLREALNGDTMDLRAATEIICSRTPS 380
Y E+L ++ EL+ + ++ + LW L+ A RDA + EA T + E+ C+R+
Sbjct: 201 YEEDLIKALNKELTSDFERLVHLWTLESAERDAFLANEATKRWTSSNQVLVELACTRSSD 380
Query: 381 QLQIMKQTYYARFGTYLEHDIAHHTSGDHQKLL 479
QL K+ Y+A LE D+A+HT+GD +KLL
Sbjct: 381 QLFFAKKAYHALHKKSLEEDVAYHTTGDFRKLL 479
Score = 43.7 bits (89), Expect(2) = 6e-023
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2 / +3
Query: 32 MASLTLPPAPPNPRQDAIDLHKAFKGFGCDSTTGINILTHRDSGQRGLIQQEY 190
M++L++P P D L KAF G+G + I+IL HR+ QR +I++ Y
Sbjct: 33 MSTLSVPHPLPPVSDDVEQLRKAFSGWGTNEDLIISILGHRNEVQRKVIREAY 191
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 13,924,767
Number of Sequences: 7669
Number of extensions: 211767
Number of successful extensions: 1553
Number of sequences better than 1.0e-020: 13
length of database: 1,248,568
effective HSP length: 44
effective length of database: 911,132
effective search space used: 406364872
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)