TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3696569.2.1
         (1022 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO513205.1|CO513205  s13dSG24B0800061_129574 Glandular tr...   272   6e-074
gb|CO514640.1|CO514640  s13dSG46C0600050_327940 Glandular tr...   136   8e-067
gb|CO515743.1|CO515743  s13dSG77C1100086_419635 Glandular tr...   216   4e-057
gb|CO514666.1|CO514666  s13dSG46E1100087_327992 Glandular tr...   111   1e-052
gb|CO515120.1|CO515120  s13dSG40E0200019_399105 Glandular tr...   135   7e-033
>gb|CO513205.1|CO513205 s13dSG24B0800061_129574 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 592

 Score =  272 bits (588), Expect = 6e-074
 Identities = 100/131 (76%), Positives = 117/131 (89%)
 Frame = +3 / +2

                                                                       
Query: 66  TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
           T GGACGYGNLYS GYGT+TAALSTALFN G +CGSC+E+RC  D +WCLPG+I VTATN
Sbjct: 200 TMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCFEIRCAGDRKWCLPGSILVTATN 379

                                                                       
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTI 425
           FCPPN  LP+++GGWC+PP  HFD+A+P FLRIAQY+AGIVPV++RRVPC ++GGIRFTI
Sbjct: 380 FCPPNNALPNNNGGWCSPPLQHFDLAQPVFLRIAQYKAGIVPVSYRRVPCRRRGGIRFTI 559

                      
Query: 426 NGHSYFNLVLV 458
           NGHSYFNLVLV
Sbjct: 560 NGHSYFNLVLV 592

 Score =  129 bits (277), Expect = 5e-031
 Identities = 60/111 (54%), Positives = 69/111 (62%)
 Frame = -2 / -2

                                                                       
Query: 457 TSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGGLHQPPS 278
           T T+LK*ECPL+VN +PP    GTLL  TGT+PA Y A+ RK G A SKC +GGLH PP 
Sbjct: 591 TRTKLK*ECPLIVNLIPPLLLQGTLL*ETGTIPALY*AILRKTG*ARSKCCKGGLHHPPL 412

                                                              
Query: 277 SLGRP*LGGQKLVAVTVMVPGXXXXXXXXXXXX*QDPHAAPSLNSAVLSAA 125
            LG+   GGQKLVAVT + PG             Q+P   P LN AVL AA
Sbjct: 411 LLGKALFGGQKLVAVTKIEPGRHHLRSPAHLISKQEPQLKPLLNKAVLKAA 259
>gb|CO514640.1|CO514640 s13dSG46C0600050_327940 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 536

 Score =  136 bits (291), Expect(2) = 8e-067
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = +3 / +3

                                                                       
Query: 66  TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
           T GGACGYGNLYS GYGT+TAALSTALFN+G +CG+CYE++C ND +WC PG+I VTATN
Sbjct: 150 TMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYEIKCVNDPQWCNPGSIIVTATN 329

               
Query: 246 FCPP 257
           FCPP
Sbjct: 330 FCPP 341

 Score =  133 bits (284), Expect(2) = 8e-067
 Identities = 50/65 (76%), Positives = 57/65 (87%)
 Frame = +3 / +3

                                                                       
Query: 282 GGWCNPPRPHFDMAEPAFLRIAQYRAGIVPVAFRRVPCVKKGGIRFTINGHSYFNLVLVT 461
           GGWC+PP  HFD+++P F  IAQYRAGIVPVA+RRV C ++GGIRFTINGHSYFNLVLVT
Sbjct: 342 GGWCDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVRCKRRGGIRFTINGHSYFNLVLVT 521

                
Query: 462 NVAGA 476
           NV GA
Sbjct: 522 NVGGA 536

 Score = 86.3 bits (182), Expect(3) = 1e-022
 Identities = 41/65 (63%), Positives = 44/65 (67%)
 Frame = -2 / -2

                                                                       
Query: 475 APATLVTSTRLK*ECPLMVNRMPPFFTHGTLLNATGTMPARYCAMRRKAGSAMSKCGRGG 296
           AP T VT T+LK*ECPLMVN +PP   H TLL ATGT+PA Y AM  K G   SK   GG
Sbjct: 535 APPTFVTRTKLK*ECPLMVNLIPPLLLHLTLL*ATGTIPALY*AMC*KIG*ERSKW*LGG 356

                
Query: 295 LHQPP 281
            HQPP
Sbjct: 355 SHQPP 341

 Score = 29.0 bits (57), Expect(3) = 1e-022
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -2 / -2

                         
Query: 256 GGQKLVAVTVMVPG 215
           GGQKLVAVT++ PG
Sbjct: 340 GGQKLVAVTIIDPG 299

 Score = 23.1 bits (44), Expect(3) = 1e-022
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2 / -2

                          
Query: 169 PHAAPSLNSAVLSAA 125
           P   P LNSAVL+AA
Sbjct: 253 PQLNPLLNSAVLNAA 209
>gb|CO515743.1|CO515743 s13dSG77C1100086_419635 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 538

 Score =  216 bits (466), Expect = 4e-057
 Identities = 79/102 (77%), Positives = 91/102 (89%)
 Frame = +3 / +1

                                                                       
Query: 66  TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTATN 245
           T GGACGYGNLYS GYGT+TAALSTALFN G +CGSCYE+RC++D RWC PG+I VTATN
Sbjct: 232 TMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEMRCNDDPRWCKPGSIIVTATN 411

                                                     
Query: 246 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVP 371
           FCPPN  LP+++GGWCNPP  HFDMAEPA+L+IA+YRAGIVP
Sbjct: 412 FCPPNPSLPNNNGGWCNPPLQHFDMAEPAYLQIAEYRAGIVP 537

 Score = 97.7 bits (207), Expect = 2e-021
 Identities = 46/82 (56%), Positives = 53/82 (64%)
 Frame = -2 / -3

                                                                       
Query: 370 GTMPARYCAMRRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGXXXXXXXX 191
           GT+PA Y A+ R AGSA+SKC +GGLHQPP  LG+   GGQK VAVT++ PG        
Sbjct: 536 GTIPALYSAI*R*AGSAISKCCKGGLHQPPLLLGKDGFGGQKFVAVTIIEPGLHHLGSSL 357

                                 
Query: 190 XXXX*QDPHAAPSLNSAVLSAA 125
               *QDP   P LN AVLSAA
Sbjct: 356 HLIS*QDPQLKPLLNKAVLSAA 291
>gb|CO514666.1|CO514666 s13dSG46E1100087_327992 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 542

 Score =  111 bits (238), Expect(2) = 1e-052
 Identities = 40/59 (67%), Positives = 48/59 (81%)
 Frame = +3 / +1

                                                                      
Query: 66  TTGGACGYGNLYSTGYGTSTAALSTALFNDGAACGSCYELRCDNDGRWCLPGTITVTAT 242
           T GGACGYGNLYS GYG +TAALSTALFN+G +CG+C+EL+CD D RWC PG  ++  T
Sbjct: 226 TMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCDQDPRWCNPGNPSILIT 402

 Score =  109 bits (233), Expect(2) = 1e-052
 Identities = 39/51 (76%), Positives = 45/51 (88%)
 Frame = +3 / +1

                                                              
Query: 222 TITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLRIAQYRAGIVPV 374
           +I +TATNFCPPN+  PSD+GGWCNPPRPH D+A P FL+IAQYRAGIVPV
Sbjct: 388 SILITATNFCPPNFAQPSDNGGWCNPPRPHSDLAMPMFLKIAQYRAGIVPV 540
>gb|CO515120.1|CO515120 s13dSG40E0200019_399105 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 314

 Score =  135 bits (290), Expect = 7e-033
 Identities = 54/76 (71%), Positives = 61/76 (80%)
 Frame = +3 / +3

                                                                       
Query: 417 FTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNSYLDRQALSFQ 596
           FTINGHSYFNLVLVTNV GAGDV SV+I+GSRT WQ MSRNWGQNWQSNSYL+ Q+LS  
Sbjct: 6   FTINGHSYFNLVLVTNVGGAGDVHSVAIKGSRTRWQAMSRNWGQNWQSNSYLNGQSLSVV 185

                           
Query: 597 VTASDGRTVTSNGAVP 644
           VT  +G ++ S    P
Sbjct: 186 VTTGNGHSIVSFNVAP 233
  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 5,279,031
Number of Sequences: 7669
Number of extensions: 56685
Number of successful extensions: 754
Number of sequences better than 1.0e-020: 5
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 272883897
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)