TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3230315.2.1
         (457 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO514488.1|CO514488  s13dSG43C1100084_327636 Glandular tr...   177   6e-046
gb|U28148.1|MSU28148  Medicago sativa putative pectinesteras...    95   4e-021

>gb|CO514488.1|CO514488 s13dSG43C1100084_327636 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 592

 Score =  177 bits (382), Expect = 6e-046
 Identities = 64/102 (62%), Positives = 85/102 (83%)
 Frame = -1 / +3

                                                                       
Query: 448 KTYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRV 269
           K++LGRPW++YSRTV++++ +D  ++PAGWL W+G+FALDTLYY EY NTG G+ TS RV
Sbjct: 96  KSHLGRPWQKYSRTVFMKTVIDGFINPAGWLPWDGNFALDTLYYAEYANTGSGSSTSNRV 275

                                                     
Query: 268 KWKGYRVITSAAEASAFTVGNFIDGDLWLAGTSIPFTTGL*A 143
            WKGY V+TSA++AS FTVGNFI G+ W+  T +PFT+GL*A
Sbjct: 276 TWKGYHVLTSASQASPFTVGNFIAGNSWIGNTGVPFTSGL*A 401



>gb|U28148.1|MSU28148 Medicago sativa putative pectinesterase mRNA, complete cds
          Length = 1573

 Score = 95.5 bits (202), Expect = 4e-021
 Identities = 37/76 (48%), Positives = 50/76 (65%)
 Frame = -1 / +1

                                                                        
Query: 445  TYLGRPWKQYSRTVYLQSELDSLVDPAGWLEWNGSFALDTLYYGEYMNTGPGAGTSGRVK 266
            +YLGRPWKQYS+ V + S +D++  P G++ W GS   +T  Y EY N GPGA T+ RVK
Sbjct: 1105 SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVK 1284

                            
Query: 265  WKGYRVITSAAEASAF 218
            W G +V+TS   A  +
Sbjct: 1285 WHGVKVLTSNVAAEYY 1332



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 2,762,409
Number of Sequences: 7669
Number of extensions: 27703
Number of successful extensions: 1595
Number of sequences better than 1.0e-020: 2
length of database: 1,248,568
effective HSP length: 40
effective length of database: 941,808
effective search space used: 104540688
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)