TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3115097.2.1
         (987 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO514640.1|CO514640  s13dSG46C0600050_327940 Glandular tr...   115   1e-054
gb|CO513205.1|CO513205  s13dSG24B0800061_129574 Glandular tr...   106   1e-049
gb|CO514666.1|CO514666  s13dSG46E1100087_327992 Glandular tr...   135   6e-044
gb|CO515743.1|CO515743  s13dSG77C1100086_419635 Glandular tr...   117   8e-038
gb|CO515120.1|CO515120  s13dSG40E0200019_399105 Glandular tr...    61   2e-021
>gb|CO514640.1|CO514640 s13dSG46C0600050_327940 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 536

 Score =  115 bits (245), Expect(2) = 1e-054
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = -1 / +3

                                                                       
Query: 717 PKDQWCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVT 538
           P   WC PP  HFDLS P F  IAQ +AGIVP++YRRV C ++GGIR+TI G+ YFN+V 
Sbjct: 336 PPGGWCDPPNHHFDLSQPIFQHIAQYRAGIVPVAYRRVRCKRRGGIRFTINGHSYFNLVL 515

                  
Query: 537 ITNVGGA 517
           +TNVGGA
Sbjct: 516 VTNVGGA 536

 Score =  113 bits (241), Expect(2) = 1e-054
 Identities = 41/83 (49%), Positives = 53/83 (63%)
 Frame = -1 / +3

                                                                       
Query: 984 HGKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGG 805
           +G+     W  AHATFYGG D SGT  GACGY +  +QGYG  T A+ST LF +G +CG 
Sbjct: 78  NGRGGHASWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGA 257

                                  
Query: 804 CYEVRCVDSPSGCKPDAAALVVT 736
           CYE++CV+ P  C P +  +  T
Sbjct: 258 CYEIKCVNDPQWCNPGSIIVTAT 326

 Score = 65.7 bits (137), Expect(2) = 3e-021
 Identities = 33/62 (53%), Positives = 35/62 (56%)
 Frame = +2 / -2

                                                                       
Query: 761 GLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVPDPSRPP*K 940
           GLH  G  TH  S*H PQ  P  NS VL A V  P P      YP AP +VP+ S PP*K
Sbjct: 301 GLHHCGSFTHLIS*HAPQLNPLLNSAVLNAAVFVP*PWL*RFPYPQAPPIVPEASLPP*K 122

             
Query: 941 VA 946
           VA
Sbjct: 121 VA 116

 Score = 50.6 bits (104), Expect(2) = 3e-021
 Identities = 29/62 (46%), Positives = 33/62 (53%)
 Frame = +2 / -2

                                                                       
Query: 518 APPTLVIVTMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGG 697
           APPT V  T LK   P+MV  +PP   H TL *  GT+PA   A+    G  RSK   GG
Sbjct: 535 APPTFVTRTKLK*ECPLMVNLIPPLLLHLTLL*ATGTIPALY*AMC*KIG*ERSKW*LGG 356

             
Query: 698 LH 703
            H
Sbjct: 355 SH 350
>gb|CO513205.1|CO513205 s13dSG24B0800061_129574 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 592

 Score =  106 bits (226), Expect(2) = 1e-049
 Identities = 39/77 (50%), Positives = 47/77 (61%)
 Frame = -1 / +2

                                                                       
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
           G W  AHATFYGG D SGT  GACGY +  +QGYG  T A+ST LF  G +CG C+E+RC
Sbjct: 146 GGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCFEIRC 325

                            
Query: 786 VDSPSGCKPDAAALVVT 736
                 C P +  +  T
Sbjct: 326 AGDRKWCLPGSILVTAT 376

 Score =  105 bits (223), Expect(2) = 1e-049
 Identities = 37/57 (64%), Positives = 47/57 (82%)
 Frame = -1 / +2

                                                                    
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPISYRRVACAKQGGIRYTITGNKYFNMVTI 535
           WC PP +HFDL+ P FL+IAQ KAGIVP+SYRRV C ++GGIR+TI G+ YFN+V +
Sbjct: 422 WCSPPLQHFDLAQPVFLRIAQYKAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLV 592

 Score = 62.0 bits (129), Expect(2) = 1e-022
 Identities = 34/77 (44%), Positives = 36/77 (46%)
 Frame = +2 / -2

                                                                       
Query: 737 VTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYPHAPAVVP 916
           V  +    G H L    H  S   PQ  P  N  VL A V  P P      YPHAP +VP
Sbjct: 375 VAVTKIEPGRHHLRSPAHLISKQEPQLKPLLNKAVLKAAVFVP*P*LYRFPYPHAPPIVP 196

                            
Query: 917 DPSRPP*KVAWAGFHGP 967
           D S PP*KVA A  H P
Sbjct: 195 DASLPP*KVACALTHPP 145

 Score = 59.3 bits (123), Expect(2) = 1e-022
 Identities = 28/55 (50%), Positives = 33/55 (60%)
 Frame = +2 / -2

                                                                  
Query: 542 TMLKYLFPVMVYRMPPCFAHATLR*EIGTMPAFSCAIWRNAGMLRSKCSRGGLHH 706
           T LK   P++V  +PP     TL *E GT+PA   AI R  G  RSKC +GGLHH
Sbjct: 585 TKLK*ECPLIVNLIPPLLLQGTLL*ETGTIPALY*AILRKTG*ARSKCCKGGLHH 421
>gb|CO514666.1|CO514666 s13dSG46E1100087_327992 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 542

 Score =  135 bits (290), Expect(2) = 6e-044
 Identities = 47/89 (52%), Positives = 61/89 (68%)
 Frame = -1 / +1

                                                                       
Query: 981 GKFTAGPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGC 802
           G +T GPW  AHATFYGG D SGT  GACGY +  +QGYGV T A+ST LF +G +CG C
Sbjct: 157 GVYTGGPWTSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGAC 336

                                        
Query: 801 YEVRCVDSPSGCKPDAAALVVTVTDLCPP 715
           +E++C   P  C P   ++++T T+ CPP
Sbjct: 337 FELKCDQDPRWCNPGNPSILITATNFCPP 423

 Score = 76.7 bits (161), Expect(2) = 2e-021
 Identities = 41/89 (46%), Positives = 47/89 (52%)
 Frame = +2 / -1

                                                                       
Query: 716 GGHRSVTVTTSAAASGLHPLGLSTHRTS*HPPQAVPSPNSTVLTATVCTPYPCARVSLYP 895
           GG + V V       GLH  G  +H +S H PQ  P  NS VL+A V TP P      YP
Sbjct: 422 GGQKFVAVIKIDGFPGLHQRGS*SHLSSKHAPQLKPLLNSAVLSAAVFTP*PWLYRFPYP 243

                                        
Query: 896 HAPAVVPDPSRPP*KVAWAGFHGPAVNLP 982
            AP +VP+ S PP*KVA A   GP V  P
Sbjct: 242 QAPPIVPEASLPP*KVA*ALVQGPPV*TP 156

 Score = 57.0 bits (118), Expect(2) = 6e-044
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = -1 / +1

                                        
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVPI 619
           WC PPR H DL+MP FL+IAQ +AGIVP+
Sbjct: 454 WCNPPRPHSDLAMPMFLKIAQYRAGIVPV 540

 Score = 40.0 bits (81), Expect(2) = 2e-021
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1 / -3

                                           
Query: 619 DRHDAGLLLRDLEERGHAEVEVLPRWLAPLVL 714
           D  D+G +L DLEE  H+++ V  RW+AP  +
Sbjct: 540 DGDDSGTILSDLEEHRHSKIRVRSRWVAPATI 445
>gb|CO515743.1|CO515743 s13dSG77C1100086_419635 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 538

 Score =  117 bits (250), Expect(2) = 8e-038
 Identities = 43/77 (55%), Positives = 51/77 (66%)
 Frame = -1 / +1

                                                                       
Query: 966 GPWKPAHATFYGGRDGSGTTAGACGYKDTRAQGYGVQTVAVSTVLFGDGTACGGCYEVRC 787
           G W+ AHATFYGG D SGT  GACGY +  +QGYG  T A+ST LF  G +CG CYE+RC
Sbjct: 178 GGWESAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGLSCGSCYEMRC 357

                            
Query: 786 VDSPSGCKPDAAALVVT 736
            D P  CKP +  +  T
Sbjct: 358 NDDPRWCKPGSIIVTAT 408

 Score = 54.7 bits (113), Expect(2) = 8e-038
 Identities = 18/28 (64%), Positives = 24/28 (85%)
 Frame = -1 / +1

                                       
Query: 705 WCKPPREHFDLSMPAFLQIAQEKAGIVP 622
           WC PP +HFD++ PA+LQIA+ +AGIVP
Sbjct: 454 WCNPPLQHFDMAEPAYLQIAEYRAGIVP 537
>gb|CO515120.1|CO515120 s13dSG40E0200019_399105 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 314

 Score = 61.1 bits (127), Expect(2) = 2e-021
 Identities = 23/54 (42%), Positives = 30/54 (55%)
 Frame = -1 / +3

                                                                 
Query: 480 RVKWTEMKRNWGQVWQTGEDLTCESLTFRVMTSDHRKATSWHVLPADWKFGVTY 319
           R +W  M RNWGQ WQ+   L  +SL+  V T +     S++V P  W FG TY
Sbjct: 99  RTRWQAMSRNWGQNWQSNSYLNGQSLSVVVTTGNGHSIVSFNVAPPSWSFGQTY 260

 Score = 56.1 bits (116), Expect(2) = 2e-021
 Identities = 19/32 (59%), Positives = 28/32 (87%)
 Frame = -1 / +3

                                           
Query: 576 YTITGNKYFNMVTITNVGGAGDIAAVSVKGSK 481
           +TI G+ YFN+V +TNVGGAGD+ +V++KGS+
Sbjct: 6   FTINGHSYFNLVLVTNVGGAGDVHSVAIKGSR 101
  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 8,320,369
Number of Sequences: 7669
Number of extensions: 130188
Number of successful extensions: 1355
Number of sequences better than 1.0e-020: 5
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 261858285
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)