TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3099514.2.1
         (547 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AF049487.1|AF049487  Medicago sativa sucrose synthase mRN...   137   1e-033

>gb|AF049487.1|AF049487 Medicago sativa sucrose synthase mRNA, complete cds
          Length = 2760

 Score =  137 bits (294), Expect = 1e-033
 Identities = 53/76 (69%), Positives = 64/76 (84%)
 Frame = +2 / +2

                                                                        
Query: 2    KQDPDHWVKISGAGLQRIYEKYTWKIYSERLMILAGVYGFWKYVSKLERRETRRYLEMFY 181
            K DP HW KIS  GLQRI EKYTW IYS+RL+ L GVYGFWK+VS L+R E+RRYLEMFY
Sbjct: 2249 KADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFY 2428

                            
Query: 182  ILKFRELAKTVPLAID 229
             LK+R+LA++VPLA++
Sbjct: 2429 ALKYRKLAESVPLAVE 2476



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 4,553,518
Number of Sequences: 7669
Number of extensions: 61134
Number of successful extensions: 2471
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 41
effective length of database: 934,139
effective search space used: 130779460
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)