TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3067043.2.1
         (834 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO513318.1|CO513318  s13dSG37F0400031_129800 Glandular tr...   111   9e-026

>gb|CO513318.1|CO513318 s13dSG37F0400031_129800 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 564

 Score =  111 bits (238), Expect = 9e-026
 Identities = 42/80 (52%), Positives = 57/80 (71%)
 Frame = +3 / +1

                                                                       
Query: 9   EALNAKAXHYQKPEDVPFFPQDLPSPLFPTKPSPKVLHPFASLVTVNDAIWKMYFDELLP 188
           E + AKA  Y+ PE+ PFFP++LP  L P+ P  K LHP A+ + ++ ++WKMYF +LLP
Sbjct: 325 ETVQAKAGRYKNPEENPFFPENLPLSLVPSYPFSKFLHPGAASINIDKSLWKMYFHDLLP 504

                               
Query: 189 LFTVDGDDGSYAQTVALDLA 248
           LF   GDDG+YAQT A DL+
Sbjct: 505 LFVASGDDGNYAQTAASDLS 564



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 7,490,544
Number of Sequences: 7669
Number of extensions: 104168
Number of successful extensions: 1147
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 217720450
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)