TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2762970.2.1
         (578 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AW698762.1|AW698762  r336 non-glandular-haired subtracted...   180   2e-046

>gb|AW698762.1|AW698762 r336 non-glandular-haired subtracted cDNA library Medicago sativa
           cDNA, mRNA sequence
          Length = 390

 Score =  180 bits (390), Expect = 2e-046
 Identities = 78/102 (76%), Positives = 84/102 (82%)
 Frame = +2 / +2

                                                                       
Query: 2   PMSRIDDAVYRILRVKFTMGLFENPYPDSSLAGELGKQEHRELAREAVRKSLVLLKNGKS 181
           PM RIDDAV RIL VKFTMGLFENP  D SL  ELG Q HR+LAREA+RKSLVLLKNGK+
Sbjct: 62  PMDRIDDAVERILVVKFTMGLFENPPADFSLVNELGSQAHRDLAREALRKSLVLLKNGKN 241

                                                     
Query: 182 SYAPLLPLPKKAGKILVAGSHANDLGNQCGGWTITWQGSSGN 307
             A LLPLPKKA KILVAG+HA++LG QCGGWTI WQG  GN
Sbjct: 242 QSAQLLPLPKKARKILVAGTHADNLGYQCGGWTIKWQGFIGN 367




 Score =  122 bits (262), Expect = 3e-029
 Identities = 55/97 (56%), Positives = 66/97 (68%)
 Frame = -3 / -1

                                                                       
Query: 291 CHVIVHPPHWLPRSLAWLPATRILPAFFGRGSNGA*EDLPFFRRTRDFLTASRASSRCSC 112
           CH+IVHPPHW P+  A +PAT+I  AFFGRG + A    PF   T DFL+AS A S C+ 
Sbjct: 351 CHLIVHPPHWYPKLSA*VPATKIFRAFFGRGRS*ALWFFPFLSSTSDFLSASLARSLCAW 172

                                                
Query: 111 FPSSPARLESG*GFSNRPMVNLTRRIL*TASSILLMG 1
            PSS  +L+S  GFS RPMVN T +IL TASSI  +G
Sbjct: 171 LPSSLTKLKSAGGFSKRPMVNFTTKILSTASSIRSIG 61



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.316    0.137    0.438 


Matrix: BLOSUM62
Number of Hits to DB: 3,563,783
Number of Sequences: 7669
Number of extensions: 38894
Number of successful extensions: 816
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 38
effective length of database: 957,146
effective search space used: 147400484
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)