TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2750422.2.1
         (1599 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|Y11607.1|MSMP2C  M.sativa mRNA for protein phosphatase 2C      71   4e-023

>emb|Y11607.1|MSMP2C M.sativa mRNA for protein phosphatase 2C
          Length = 1499

 Score = 70.7 bits (148), Expect(3) = 4e-023
 Identities = 31/61 (50%), Positives = 39/61 (63%)
 Frame = -3 / +3

                                                                        
Query: 1117 GSTACVALIRNTQLVVANAGDSRCVISRGGKAYNLSRDHKPELAAERERIMKAGGFIHMG 938
            GS    A IRN  LVV+NAGD R VISRGG A  L+ DH+P    E++RI   GG++ + 
Sbjct: 732  GSCCVTAFIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDEKDRIETLGGYVDLC 911

             
Query: 937  R 935
            R
Sbjct: 912  R 914




 Score = 39.6 bits (80), Expect(3) = 4e-023
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3 / +3

                                           
Query: 1456 DSETAFFGVFDGHGGRVVAKFCAKYLHGQVL 1364
            ++  AFFGVFDGHGG   A+F    L   +L
Sbjct: 540  ENNLAFFGVFDGHGGAKAAEFARNNLEKNIL 632




 Score = 38.6 bits (78), Expect(3) = 4e-023
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3 / +3

                                                        
Query: 859  KQIVTANPDINVVELCXXXXXXXVACDGIWDCMSSQQLVDFIHE 728
            KQ VTA P+  V+ +        +A DG+WD +S+Q+ VD   +
Sbjct: 975  KQWVTAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDIARQ 1106



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 16,138,630
Number of Sequences: 7669
Number of extensions: 254710
Number of successful extensions: 1599
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 44
effective length of database: 911,132
effective search space used: 444632416
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)