TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647494.2.1
(730 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW698442.1|AW698442 G296 glandular-haired subtracted cDN... 246 2e-066
gb|AW698617.1|AW698617 g513 glandular-haired subtracted cDN... 234 8e-063
gb|CO514742.1|CO514742 s13dSG55F0200027_328144 Glandular tr... 175 7e-045
gb|CO512153.1|CO512153 s13dSG34E0900067_108626 Glandular tr... 171 6e-044
gb|CO514801.1|CO514801 s13dSG59D0300030_328262 Glandular tr... 171 6e-044
gb|CO511830.1|CO511830 s13dSG02E0400035_103560 Glandular tr... 166 2e-042
gb|CO515876.1|CO515876 s13dSG91B0900075_421291 Glandular tr... 166 4e-042
gb|CO512082.1|CO512082 s13dSG18F0600047_108484 Glandular tr... 160 1e-040
gb|CO514307.1|CO514307 s13dSG76H0900076_157276 Glandular tr... 160 1e-040
gb|CO512439.1|CO512439 s13dSG80H0800064_114392 Glandular tr... 144 9e-036
gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier pr... 144 9e-036
gb|CO516470.1|CO516470 s13dSG28C0900068_446268 Glandular tr... 142 6e-035
gb|CO512021.1|CO512021 s13dSG07H0700064_103942 Glandular tr... 137 1e-033
gb|CO512178.1|CO512178 s13dSG34H1100092_108676 Glandular tr... 134 1e-032
gb|CO514418.1|CO514418 s13dSG36D0500044_327496 Glandular tr... 132 5e-032
gb|AW698741.1|AW698741 r315 non-glandular-haired subtracted... 107 1e-030
gb|CO516360.1|CO516360 s13dSG99F0200015_446048 Glandular tr... 122 5e-029
gb|CO517244.1|CO517244 s13dSG32E0500039_486084 Glandular tr... 100 2e-022
>gb|AW698442.1|AW698442 G296 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 345
Score = 246 bits (532), Expect = 2e-066
Identities = 101/105 (96%), Positives = 103/105 (98%)
Frame = -3 / -2
Query: 686 MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFL 507
MANSNLPRRIIKETQR LSEPAPGISASPSE+NMRYFNVMILGP QSPYEGGVFKL+LFL
Sbjct: 317 MANSNLPRRIIKETQRXLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLDLFL 138
Query: 506 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 372
PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 137 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 3
Score = 200 bits (431), Expect = 2e-052
Identities = 90/106 (84%), Positives = 96/106 (90%)
Frame = +1 / +1
Query: 370 TVRI*RAGLHLSLRMSRHILPSLSILGW*IFVRNLTFGAAIGYSSGKNSSSLKTPPS*GD 549
TVRI*RAGLHLS R+SRHILPSLS+LG IFV+NLTFGAAIGYSSGKN SSLKTPPS*GD
Sbjct: 1 TVRI*RAGLHLSFRISRHILPSLSMLG*YIFVKNLTFGAAIGYSSGKNRSSLKTPPS*GD 180
Query: 550 CAGPRIMTLKYRIFSSDGDALIPGAGSLRSRCVSLMIRRGRLLLAM 687
GPRI+TLKYRI SS+GDALIPGAGSL RCVSLMI RGRLLLA+
Sbjct: 181 *VGPRIITLKYRILSSEGDALIPGAGSLSXRCVSLMILRGRLLLAI 318
Score = 138 bits (295), Expect = 1e-033
Identities = 54/102 (52%), Positives = 69/102 (67%)
Frame = +3 / +3
Query: 381 LKSWTPFVLKNVEAYPTKLVNIRMVNFCEKSNFWGSHWIFLRQE*FKLENSTFIG*LRGA 560
LK TP + +N++ YP KLVN+RM+ FC++ + W SHWIF RQ+* LENS FI L A
Sbjct: 12 LKGGTPLIFQNIKTYPAKLVNVRMIYFCQEPDLWSSHWIFFRQK*V*LENSPFIRRLSWA 191
Query: 561 KDHDIEVPHILLRRRRANPRCWFAEKPLRLLDDSAREIAVGH 686
KDH IE+PHI+ RR N R W E L LDDS+R++ V H
Sbjct: 192 KDHHIEIPHIVFRRGCTNSRRWLTEXTLCFLDDSSRKVTVSH 317
Score = 100 bits (213), Expect = 2e-022
Identities = 48/93 (51%), Positives = 61/93 (65%)
Frame = -2 / -1
Query: 687 HGQQQSPAPNHQGDAAASQRTSTGD*RVAVGGEYAVLQCHDPWPRAVTL*RWSFQA*TIL 508
+G Q + NHQG+ A +Q S +* + G +YAV QC DPWP +V+L*R SFQA I
Sbjct: 318 NG*Q*PSSKNHQGNTAXAQ*ASAWN*CIPFGRQYAVFQCDDPWPNSVSL*RGSFQARPIF 139
Query: 507 A*GISNGCPKS*ISHKNLPS*Y*QAW*DMPRHS 409
A* ISNGC K + KN+ S*+*QAW DM +S
Sbjct: 138 A*RISNGCSKGQVLDKNISS*H*QAWQDMS*YS 40
>gb|AW698617.1|AW698617 g513 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 344
Score = 234 bits (506), Expect = 8e-063
Identities = 97/100 (97%), Positives = 97/100 (97%)
Frame = -3 / -1
Query: 671 LPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYP 492
LPRRIIKETQRLLSEPAPGI ASPSE NMRYFNVMILGP QSPYEGGVFKLELFLPEEYP
Sbjct: 302 LPRRIIKETQRLLSEPAPGIRASPSEVNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYP 123
Query: 491 MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 372
MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 122 MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 3
Score = 190 bits (410), Expect = 1e-049
Identities = 85/101 (84%), Positives = 91/101 (90%)
Frame = +1 / +1
Query: 370 TVRI*RAGLHLSLRMSRHILPSLSILGW*IFVRNLTFGAAIGYSSGKNSSSLKTPPS*GD 549
TVRI*RAGLHLS R+SRHILPSLS+LG IFV+NLTFGAAIGYSSGKNSSSLKTPPS*GD
Sbjct: 1 TVRI*RAGLHLSFRISRHILPSLSMLG*YIFVKNLTFGAAIGYSSGKNSSSLKTPPS*GD 180
Query: 550 CAGPRIMTLKYRIFSSDGDALIPGAGSLRSRCVSLMIRRGR 672
GPRI+TLKYRI +S+GDA IPGAGSL RCVSLMI RGR
Sbjct: 181 *VGPRIITLKYRILTSEGDARIPGAGSLSKRCVSLMILRGR 303
Score = 138 bits (296), Expect = 7e-034
Identities = 55/98 (56%), Positives = 69/98 (70%)
Frame = +3 / +3
Query: 381 LKSWTPFVLKNVEAYPTKLVNIRMVNFCEKSNFWGSHWIFLRQE*FKLENSTFIG*LRGA 560
LK TP + +N++ YP KLVN+RM+ FC++SN W SHWIF RQ+*F LENS FI L A
Sbjct: 12 LKGRTPLIFQNIKTYPAKLVNVRMIYFCQESNLWSSHWIFFRQK*F*LENSPFIRRLSWA 191
Query: 561 KDHDIEVPHILLRRRRANPRCWFAEKPLRLLDDSAREI 674
KDH IE+PHI RR N R W E+ L LDDS+R++
Sbjct: 192 KDHHIEIPHIDFRRGCTNSRRWLTEQTLCFLDDSSRKV 305
Score = 102 bits (218), Expect = 4e-023
Identities = 48/84 (57%), Positives = 58/84 (69%)
Frame = -2 / -3
Query: 660 NHQGDAAASQRTSTGD*RVAVGGEYAVLQCHDPWPRAVTL*RWSFQA*TILA*GISNGCP 481
NHQG+ A +Q S + + G +YAV QC DPWP +V+L*R SFQA TI A* ISNGC
Sbjct: 291 NHQGNTAFAQ*ASAWNSCIPFGSQYAVFQCDDPWPNSVSL*RGSFQARTIFA*RISNGCS 112
Query: 480 KS*ISHKNLPS*Y*QAW*DMPRHS 409
K *I KN+ S*+*QAW DM +S
Sbjct: 111 KG*ILDKNISS*H*QAWQDMS*YS 40
>gb|CO514742.1|CO514742 s13dSG55F0200027_328144 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 526
Score = 175 bits (376), Expect = 7e-045
Identities = 71/145 (48%), Positives = 96/145 (66%)
Frame = -3 / +2
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 83 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 262
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 306
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +L++ PNPDDPL I
Sbjct: 263 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLVTDPNPDDPLVPEI 442
Query: 305 AKHWKSNEAEAVETAKEWTRLYTSG 231
A +K++ + TA+ WT+ Y G
Sbjct: 443 AHMYKTDRTKYEATARSWTQKYAMG 517
Score = 95.9 bits (203), Expect = 5e-021
Identities = 58/153 (37%), Positives = 77/153 (50%)
Frame = +1 / -2
Query: 232 PLVYRRVHSFAVSTASASLDFQCFAMLSERGSSGFGALRSA*MLSRTVRI*RAGLHLSLR 411
P+ Y V AV++ A+ GSSG G++ + + T+ + AGLH SLR
Sbjct: 516 PMAYFCVQLRAVASYLVLSVLYICAISGTSGSSGLGSVTNEQIDKSTLEMVSAGLHCSLR 337
Query: 412 MSRHILPSLSILGW*IFVRNLTFGAAIGYSSGKNSSSLKTPPS*GDCAGPRIMTLKYRIF 591
MSR ILP L + GW V N TFG G S GK + TPP+*G AGP I+ + +
Sbjct: 336 MSRQILPLLLMFGWNTLVLNATFGGLNG*SGGK*IETKNTPPA*GLSAGPMIVACQ*NMS 157
Query: 592 SSDGDALIPGAGSLRSRCVSLMIRRGRLLLAME 690
S+ G AL GS SL IR +L + E
Sbjct: 156 SATGPALHDVGGSFCKSLSSLRIRFDAMLKSKE 58
>gb|CO512153.1|CO512153 s13dSG34E0900067_108626 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 582
Score = 171 bits (369), Expect = 6e-044
Identities = 70/142 (49%), Positives = 97/142 (68%)
Frame = -3 / +1
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+RI KE + L +P SA P E++ ++ I+GPA SPY GGVF + + P +YP
Sbjct: 94 KRITKELKDLQKDPPVSCSAGPVGEDLFHWQATIMGPADSPYAGGVFLVTIHFPPDYPSK 273
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 306
PKV F TK++HPNI+ G ICLDILK++WSPAL + VLLSI +LL+ PNPDDPL +I
Sbjct: 274 PPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPDI 453
Query: 305 AKHWKSNEAEAVETAKEWTRLY 240
A +K+++A+ TA+ WT+ Y
Sbjct: 454 AHMYKTDKAKYETTARSWTQKY 519
Score = 100 bits (212), Expect = 3e-022
Identities = 60/143 (41%), Positives = 75/143 (52%)
Frame = +1 / -2
Query: 235 LVYRRVHSFAVSTASASLDFQCFAMLSERGSSGFGALRSA*MLSRTVRI*RAGLHLSLRM 414
+ Y V AV + A +A+ +GSSGFG++ + SRT RAGLH S RM
Sbjct: 524 IAYF*VQDRAVVSYLALSVLYMWAISGTKGSSGFGSVSREQIDSRTFETVRAGLHCSFRM 345
Query: 415 SRHILPSLSILGW*IFVRNLTFGAAIGYSSGKNSSSLKTPPS*GDCAGPRIMTLKYRIFS 594
SR ILP L +LGW FVR TFG G S GK + TPP+*G AGP I+ + S
Sbjct: 344 SRQILPLLLMLGWNTFVRKETFGGLDG*SGGK*MVTRNTPPA*GLSAGPMIVACQ*NRSS 165
Query: 595 SDGDALIPGAGSLRSRCVSLMIR 663
G AL GS SL++R
Sbjct: 164 PTGPALQDTGGSFCKSFNSLVMR 96
>gb|CO514801.1|CO514801 s13dSG59D0300030_328262 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 586
Score = 171 bits (369), Expect = 6e-044
Identities = 71/145 (48%), Positives = 95/145 (65%)
Frame = -3 / +1
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 94 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYTGGVFLVSIHFPPDYPFK 273
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 306
PK F TK++HPNI+ G ICLDILK++WSPAL I LLSI +LL+ PNPDDPL I
Sbjct: 274 PPKGAFRTKVFHPNINSNGSICLDILKEQWSPALTISKGLLSICSLLTDPNPDDPLVPEI 453
Query: 305 AKHWKSNEAEAVETAKEWTRLYTSG 231
A +K++ A+ TA+ WT+ Y G
Sbjct: 454 AHMYKTDRAKYEATARSWTQKYAMG 528
>gb|CO511830.1|CO511830 s13dSG02E0400035_103560 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 519
Score = 166 bits (358), Expect = 2e-042
Identities = 69/148 (46%), Positives = 94/148 (63%)
Frame = -3 / +1
Query: 692 GSMANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLEL 513
G+ +RI KE + L +P SA P ++M ++ I+GP SP+ GGVF +++
Sbjct: 76 GTSVTEMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPGDSPFAGGVFLVQI 255
Query: 512 FLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 333
P +YP PKV F TK++HPNI+ G ICLDILK++WSPA I VLLSI +LL+ PN
Sbjct: 256 HFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPAFTISKVLLSICSLLTDPN 435
Query: 332 PDDPLSDNIAKHWKSNEAEAVETAKEWT 249
PDDPL IA +KS +A+ TA+ WT
Sbjct: 436 PDDPLVPEIAHMYKSXQAKYGATARSWT 519
Score = 105 bits (224), Expect = 6e-024
Identities = 61/148 (41%), Positives = 78/148 (52%)
Frame = +1 / -2
Query: 250 VHSFAVSTASASLDFQCFAMLSERGSSGFGALRSA*MLSRTVRI*RAGLHLSLRMSRHIL 429
VH AV+ A A+ RGSSG G++ M S T+ I +AGLH S RMSR +L
Sbjct: 518 VHDRAVAPYLAXSLLYI*AISGTRGSSGLGSVNREQMDSSTLDIVKAGLHCSFRMSRQML 339
Query: 430 PSLSILGW*IFVRNLTFGAAIGYSSGKNSSSLKTPPS*GDCAGPRIMTLKYRIFSSDGDA 609
P L ILGW FVRN T G G S GK + TPP+ G GP I+ ++ I S+ G A
Sbjct: 338 PLLLILGWKTFVRNETLGGLKG*SGGK*ICTRNTPPANGLSPGPIIVACQWNISSATGPA 159
Query: 610 LIPGAGSLRSRCVSLMIRRGRLLLAMEP 693
L GS SL+IR + + + P
Sbjct: 158 LQEAGGSFCKSFNSLLIRFEAISVTLVP 75
>gb|CO515876.1|CO515876 s13dSG91B0900075_421291 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 518
Score = 166 bits (356), Expect = 4e-042
Identities = 70/145 (48%), Positives = 95/145 (65%)
Frame = -3 / +3
Query: 683 ANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLP 504
+NS +RI+KE + L +P SA P E+M ++ I+GP SPY GGVF + + P
Sbjct: 84 SNSMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP 263
Query: 503 EEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD 324
+YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDD
Sbjct: 264 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 443
Query: 323 PLSDNIAKHWKSNEAEAVETAKEWT 249
PL IA +K++ ++ TA+ T
Sbjct: 444 PLVPEIAHMYKTDRSKYETTARSRT 518
>gb|CO512082.1|CO512082 s13dSG18F0600047_108484 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 587
Score = 160 bits (345), Expect = 1e-040
Identities = 66/127 (51%), Positives = 87/127 (68%)
Frame = -3 / +3
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 207 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 386
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 306
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL I
Sbjct: 387 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 566
Query: 305 AKHWKSN 285
A +K++
Sbjct: 567 AHMYKTD 587
>gb|CO514307.1|CO514307 s13dSG76H0900076_157276 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 490
Score = 160 bits (345), Expect = 1e-040
Identities = 66/127 (51%), Positives = 87/127 (68%)
Frame = -3 / +1
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 109 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 288
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 306
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL I
Sbjct: 289 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 468
Query: 305 AKHWKSN 285
A +K++
Sbjct: 469 AHMYKTD 489
>gb|CO512439.1|CO512439 s13dSG80H0800064_114392 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 567
Score = 144 bits (310), Expect = 9e-036
Identities = 55/137 (40%), Positives = 88/137 (64%)
Frame = -3 / +3
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 93 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 272
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 306
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P +
Sbjct: 273 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 452
Query: 305 AKHWKSNEAEAVETAKE 255
A+ + N+ E +E
Sbjct: 453 ARMFSENKREYNRRVRE 503
>gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier protein mRNA, complete cds
Length = 910
Score = 144 bits (310), Expect = 9e-036
Identities = 55/137 (40%), Positives = 88/137 (64%)
Frame = -3 / +2
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 143 KRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 322
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 306
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P +
Sbjct: 323 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 502
Query: 305 AKHWKSNEAEAVETAKE 255
A+ + N+ E +E
Sbjct: 503 ARMFSENKREYNRRVRE 553
>gb|CO516470.1|CO516470 s13dSG28C0900068_446268 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 418
Score = 142 bits (304), Expect = 6e-035
Identities = 58/111 (52%), Positives = 76/111 (68%)
Frame = -3 / +3
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 84 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 263
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 333
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PN
Sbjct: 264 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPN 416
>gb|CO512021.1|CO512021 s13dSG07H0700064_103942 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 584
Score = 137 bits (294), Expect = 1e-033
Identities = 51/115 (44%), Positives = 79/115 (68%)
Frame = -3 / +2
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 230 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 409
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 321
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P
Sbjct: 410 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 574
>gb|CO512178.1|CO512178 s13dSG34H1100092_108676 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 585
Score = 134 bits (287), Expect = 1e-032
Identities = 50/115 (43%), Positives = 78/115 (67%)
Frame = -3 / +2
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 230 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 409
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 321
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL P P+ P
Sbjct: 410 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPXPNSP 574
>gb|CO514418.1|CO514418 s13dSG36D0500044_327496 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 589
Score = 132 bits (283), Expect = 5e-032
Identities = 50/115 (43%), Positives = 77/115 (66%)
Frame = -3 / +2
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+R++++ +RL +P GIS +P + N+ +N +I GP +P+ GG FKL L E+YP
Sbjct: 230 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWNGGTFKLTLQFTEDYPNK 409
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 321
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PN + P
Sbjct: 410 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNXNSP 574
>gb|AW698741.1|AW698741 r315 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 335
Score = 107 bits (229), Expect(2) = 1e-030
Identities = 41/76 (53%), Positives = 53/76 (69%)
Frame = -3 / -3
Query: 611 SASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 432
SA P E+M ++ I+GPA SPY GGVF + + P +YP PKV TK++HPNI+
Sbjct: 315 SAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFKPPKVAXRTKVFHPNINSN 136
Query: 431 GRICLDILKDKWSPAL 384
G ICLDILK++WSPAL
Sbjct: 135 GSICLDILKEQWSPAL 88
Score = 40.0 bits (81), Expect(2) = 1e-030
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3 / -2
Query: 392 PALQIRTVLLSIQALLSAPNPDDPLSDNIA 303
P I VLLSI +LL+ PNPDDPL IA
Sbjct: 97 PCTDISKVLLSICSLLTDPNPDDPLVPEIA 8
>gb|CO516360.1|CO516360 s13dSG99F0200015_446048 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 396
Score = 122 bits (261), Expect = 5e-029
Identities = 45/105 (42%), Positives = 72/105 (68%)
Frame = -3 / +3
Query: 665 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 486
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 81 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 260
Query: 485 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA 351
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+
Sbjct: 261 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 395
>gb|CO517244.1|CO517244 s13dSG32E0500039_486084 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 556
Score = 100 bits (214), Expect = 2e-022
Identities = 41/94 (43%), Positives = 58/94 (61%)
Frame = -3 / -3
Query: 536 GGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI 357
GG FKL L E+YP P VRF+++++HPNI G ICLDIL++ WSP + +L SI
Sbjct: 554 GGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN*WSPIYDVAAILTSI 375
Query: 356 QALLSAPNPDDPLSDNIAKHWKSNEAEAVETAKE 255
Q+LL PNP+ P + A+ + N+ E +E
Sbjct: 374 QSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 273
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 7,014,162
Number of Sequences: 7669
Number of extensions: 111723
Number of successful extensions: 2660
Number of sequences better than 1.0e-020: 23
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 185294000
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)