TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2493645.2.1
         (870 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AJ248332.1|AJ248332  AJ248332 Medicago sativa subsp. x va...   122   6e-029
gb|CO513284.1|CO513284  s13dSG37B1200093_129732 Glandular tr...    96   6e-021

>gb|AJ248332.1|AJ248332 AJ248332 Medicago sativa subsp. x varia young root nodule Medicago
           sativa subsp. x varia cDNA clone MsNod605, mRNA sequence
          Length = 394

 Score =  122 bits (261), Expect = 6e-029
 Identities = 45/64 (70%), Positives = 46/64 (71%)
 Frame = +2 / +2

                                                                       
Query: 314 AGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGN 493
           AGS FC  KC VRCSKAS  D CLK+CGICC  CNCVPSGT GNKDECPCYRDM    G 
Sbjct: 2   AGSDFCTSKCPVRCSKASIQDRCLKFCGICCEKCNCVPSGTYGNKDECPCYRDMKNSKGK 181

               
Query: 494 RTRP 505
              P
Sbjct: 182 GKCP 193



>gb|CO513284.1|CO513284 s13dSG37B1200093_129732 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 585

 Score = 95.9 bits (203), Expect = 6e-021
 Identities = 33/59 (55%), Positives = 38/59 (64%)
 Frame = +2 / +2

                                                                      
Query: 329 CDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRP 505
           C+GKC  RCSKASR   C++ C  CC  CNCVP GT+GN D CPCY  +TT  G    P
Sbjct: 164 CNGKCGYRCSKASRQKICMRACNSCCKKCNCVPPGTSGNTDTCPCYASLTTHGGKLKCP 340



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 7,595,690
Number of Sequences: 7669
Number of extensions: 120194
Number of successful extensions: 1817
Number of sequences better than 1.0e-020: 3
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 228838090
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)