TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485944.3.1
(991 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF083333.1|AF083333 Medicago sativa cinnamyl-alcohol deh... 166 3e-079
gb|L46856.1|ALFCAD1A Medicago sativa cinnamyl-alcohol dehyd... 166 3e-079
gb|CO512656.1|CO512656 s13dSG19A0700049_121238 Glandular tr... 242 7e-065
gb|AF083332.1|AF083332 Medicago sativa cinnamyl-alcohol deh... 241 1e-064
emb|Z19573.1|MSCIALDHA M.sativa encoding cinnamyl alcohol d... 241 1e-064
gb|L46857.1|ALFCAD1B Medicago sativa cinnamyl-alcohol dehyd... 222 4e-059
gb|CO515617.1|CO515617 s13dSG47F0300031_418293 Glandular tr... 216 4e-057
gb|CO513877.1|CO513877 s13dSG73F0500043_156416 Glandular tr... 211 9e-056
gb|CO511976.1|CO511976 s13dSG07C1100086_103852 Glandular tr... 202 5e-053
gb|CO512794.1|CO512794 s13dSG88G0900068_121514 Glandular tr... 198 9e-052
gb|CO516989.1|CO516989 s13dSG81E1000081_468524 Glandular tr... 198 1e-051
gb|CO514202.1|CO514202 s13dSG70F0200015_157066 Glandular tr... 98 1e-021
>gb|AF083333.1|AF083333 Medicago sativa cinnamyl-alcohol dehydrogenase (MsaCad1) mRNA,
complete cds
Length = 1390
Score = 166 bits (358), Expect(2) = 3e-079
Identities = 64/110 (58%), Positives = 82/110 (74%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG LSP F+RR DVS+KI+YCGVC++D+ +N + YP+VPGHEI
Sbjct: 147 WAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIV 326
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFN 719
GVVT+VG +VK F+VGD+VGVG V SC+ CENCN L+ +CPK V+T+N
Sbjct: 327 GVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYN 476
Score = 144 bits (308), Expect(2) = 3e-079
Identities = 58/85 (68%), Positives = 66/85 (77%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
GT T GGYS +VVH+RY + PD PL APLLCAGITVY+PM + M +PGK LGV
Sbjct: 489 GTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVA 668
Query: 915 GLGGLGHMAVKFGKAFGLKVTVFST 989
GLGGLGH+A+KFGKAFGLKVTV ST
Sbjct: 669 GLGGLGHVAIKFGKAFGLKVTVIST 743
Score = 109 bits (233), Expect(3) = 2e-036
Identities = 58/106 (54%), Positives = 63/106 (59%)
Frame = -1 / -1
Query: 706 TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESL 527
T GQ+ S+ LQFSQ Q+ T PTPT SPTL T PT VTTP ISCPGT G
Sbjct: 463 TGLGQYCSKS*LQFSQV*QDSTITPTPTLSPTLNFFTLIPTFVTTPTISCPGTTG*VVKP 284
Query: 526 SLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
F S *QTPQY IF+ TS +LR K GER PE SLAAQ
Sbjct: 283 QSFLRVCRSE*QTPQYRIFTLTSSSPFSLREK*KGERVPEVSLAAQ 146
Score = 46.9 bits (96), Expect(3) = 2e-036
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG + IG+YTVIPAHR GA ++G SG Y TT E*PP V VP
Sbjct: 649 PGSVIP*YFIGLYTVIPAHRSGAPASRGKLSGN*TTYRW*TTTKSE*PP*VRVP 488
Score = 29.0 bits (57), Expect(3) = 2e-036
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / -1
Query: 991 QVLKTVTLRPNALPNFTA 938
+VL TVT PNALPN A
Sbjct: 745 EVLITVTFSPNALPNLIA 692
>gb|L46856.1|ALFCAD1A Medicago sativa cinnamyl-alcohol dehydrogenase (cad1) mRNA,
complete cds
Length = 1390
Score = 166 bits (358), Expect(2) = 3e-079
Identities = 64/110 (58%), Positives = 82/110 (74%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG LSP F+RR DVS+KI+YCGVC++D+ +N + YP+VPGHEI
Sbjct: 147 WAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIV 326
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFN 719
GVVT+VG +VK F+VGD+VGVG V SC+ CENCN L+ +CPK V+T+N
Sbjct: 327 GVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYN 476
Score = 144 bits (308), Expect(2) = 3e-079
Identities = 58/85 (68%), Positives = 66/85 (77%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
GT T GGYS +VVH+RY + PD PL APLLCAGITVY+PM + M +PGK LGV
Sbjct: 489 GTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVA 668
Query: 915 GLGGLGHMAVKFGKAFGLKVTVFST 989
GLGGLGH+A+KFGKAFGLKVTV ST
Sbjct: 669 GLGGLGHVAIKFGKAFGLKVTVIST 743
Score = 109 bits (233), Expect(3) = 2e-036
Identities = 58/106 (54%), Positives = 63/106 (59%)
Frame = -1 / -1
Query: 706 TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESL 527
T GQ+ S+ LQFSQ Q+ T PTPT SPTL T PT VTTP ISCPGT G
Sbjct: 463 TGLGQYCSKS*LQFSQV*QDSTITPTPTLSPTLNFFTLIPTFVTTPTISCPGTTG*VVKP 284
Query: 526 SLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
F S *QTPQY IF+ TS +LR K GER PE SLAAQ
Sbjct: 283 QSFLRVCRSE*QTPQYRIFTLTSSSPFSLREK*KGERVPEVSLAAQ 146
Score = 46.9 bits (96), Expect(3) = 2e-036
Identities = 27/54 (50%), Positives = 31/54 (57%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG + IG+YTVIPAHR GA ++G SG Y TT E*PP V VP
Sbjct: 649 PGSVIP*YFIGLYTVIPAHRSGAPASRGKLSGN*TTYRW*TTTKSE*PP*VRVP 488
Score = 29.0 bits (57), Expect(3) = 2e-036
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / -1
Query: 991 QVLKTVTLRPNALPNFTA 938
+VL TVT PNALPN A
Sbjct: 745 EVLITVTFSPNALPNLIA 692
>gb|CO512656.1|CO512656 s13dSG19A0700049_121238 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 593
Score = 242 bits (522), Expect = 7e-065
Identities = 94/177 (53%), Positives = 127/177 (71%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SG+L P +F+RR DVSLKI++CG+C+ D+ +N+ S YPLVPGHEI
Sbjct: 62 WAARDQSGLLFPFNFSRRETNEKDVSLKILFCGICHTDLHMIKNEWGISTYPLVPGHEIV 241
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G+VT++G+ V+ FKVGD VGVG ++SCR C+NC +L+++CP+ T +G DGT T
Sbjct: 242 GIVTKLGSKVEKFKVGDKVGVGFMIDSCRSCQNCAENLESYCPRFTATCSGKYRDGTTTY 421
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGL 920
GGYS +VV E + IPDG PL AAPLLCAGITVY+P+ +++PG +GV+GL
Sbjct: 422 GGYSDSMVVDEHFAVHIPDGLPLEAAAPLLCAGITVYSPLRYFGLDKPGMHIGVVGL 592
Score = 143 bits (307), Expect = 3e-035
Identities = 79/159 (49%), Positives = 92/159 (57%)
Frame = -1 / -3
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWL 686
G+YTVIPA RRGAA + G PSG+ S TT+ E*PP+V VPS +PL V GQ L
Sbjct: 537 GLYTVIPAQRRGAAASSGKPSGM*TAKCSSTTIESE*PPYVVVPSRYLPLHVAVKRGQ*L 358
Query: 685 SREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQA 506
SR QF R E PTPT SPTL T P+ VT P ISCPGT G + F +
Sbjct: 357 SRFSAQF*HDRHESIMKPTPTLSPTLNFSTLLPSFVTIPTISCPGTSG*VDMPHSFLIMW 178
Query: 505 TSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
S * PQ I S+TS +L KL G+R P+ SLAAQ
Sbjct: 177 RSV*HIPQNNILSDTSFSFVSLLEKLKGKRRPDWSLAAQ 61
>gb|AF083332.1|AF083332 Medicago sativa cinnamyl-alcohol dehydrogenase (MsaCad2) mRNA,
complete cds
Length = 1324
Score = 241 bits (520), Expect = 1e-064
Identities = 91/199 (45%), Positives = 135/199 (67%)
Frame = +3 / +3
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA+DPSG+L+P+++ R DV +KI YCGVC++D+ +N L S YP+VPGHE+ G
Sbjct: 99 AAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVG 278
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
V +VG++V FKVG+ VGVG V C+ C C+ ++ +C K ++++N + TDG +T+G
Sbjct: 279 EVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQG 458
Query: 753 GYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLG 932
G++ VV +++ KIP+G + APLLCAG+TVY+P+ + PG G++GLGG+G
Sbjct: 459 GFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVG 638
Query: 933 HMAVKFGKAFGLKVTVFST 989
HM VK KA G VTV S+
Sbjct: 639 HMGVKVAKALGHHVTVISS 695
Score = 71.2 bits (149), Expect(3) = 3e-023
Identities = 42/90 (46%), Positives = 49/90 (54%)
Frame = -1 / -1
Query: 661 QSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQ 482
Q Q+ T PTPT SPTL +T PT T+P SCPGT G + F + S *QTPQ
Sbjct: 367 QLLQQPTRRPTPTISPTLNLVTFEPTSSTSPTTSCPGTIG*LDMPRSFLIW*RSE*QTPQ 188
Query: 481 YMIFSETSPLCTALRLKLCGERTPEGSLAA 392
I TS LR+ + G R PEGS AA
Sbjct: 187 **ILM*TSSGPVFLRVYVYGVRIPEGSFAA 98
Score = 41.8 bits (85), Expect(3) = 3e-023
Identities = 24/56 (42%), Positives = 27/56 (48%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
PG F G+YTV PAH GA + PSGI TT+ PP V PSV
Sbjct: 601 PGVFSPKCESGLYTVTPAHNNGATCSGANPSGIFTTNFCSTTVDSAKPP*VIFPSV 434
Score = 27.6 bits (54), Expect(3) = 3e-023
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / -3
Query: 974 DLKTKCFTKFHSHVTQTTKT 915
D+ T C FH HV+ +TKT
Sbjct: 680 DMVT*CLCYFHPHVSYSTKT 621
>emb|Z19573.1|MSCIALDHA M.sativa encoding cinnamyl alcohol dehydrogenase
Length = 1321
Score = 241 bits (520), Expect = 1e-064
Identities = 91/199 (45%), Positives = 135/199 (67%)
Frame = +3 / +3
Query: 393 AARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAG 572
AA+DPSG+L+P+++ R DV +KI YCGVC++D+ +N L S YP+VPGHE+ G
Sbjct: 123 AAKDPSGILTPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVG 302
Query: 573 VVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKG 752
V +VG++V FKVG+ VGVG V C+ C C+ ++ +C K ++++N + TDG +T+G
Sbjct: 303 EVLEVGSNVTRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQG 482
Query: 753 GYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLG 932
G++ VV +++ KIP+G + APLLCAG+TVY+P+ + PG G++GLGG+G
Sbjct: 483 GFAESTVVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVG 662
Query: 933 HMAVKFGKAFGLKVTVFST 989
HM VK KA G VTV S+
Sbjct: 663 HMGVKVAKALGHHVTVISS 719
Score = 71.2 bits (149), Expect(3) = 3e-023
Identities = 42/90 (46%), Positives = 49/90 (54%)
Frame = -1 / -1
Query: 661 QSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQ 482
Q Q+ T PTPT SPTL +T PT T+P SCPGT G + F + S *QTPQ
Sbjct: 391 QLLQQPTRRPTPTISPTLNLVTFEPTSSTSPTTSCPGTIG*LDMPRSFLIW*RSE*QTPQ 212
Query: 481 YMIFSETSPLCTALRLKLCGERTPEGSLAA 392
I TS LR+ + G R PEGS AA
Sbjct: 211 **ILM*TSSGPVFLRVYVYGVRIPEGSFAA 122
Score = 41.8 bits (85), Expect(3) = 3e-023
Identities = 24/56 (42%), Positives = 27/56 (48%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
PG F G+YTV PAH GA + PSGI TT+ PP V PSV
Sbjct: 625 PGVFSPKCESGLYTVTPAHNNGATCSGANPSGIFTTNFCSTTVDSAKPP*VIFPSV 458
Score = 27.6 bits (54), Expect(3) = 3e-023
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3 / -3
Query: 974 DLKTKCFTKFHSHVTQTTKT 915
D+ T C FH HV+ +TKT
Sbjct: 704 DMVT*CLCYFHPHVSYSTKT 645
>gb|L46857.1|ALFCAD1B Medicago sativa cinnamyl-alcohol dehydrogenase (cad1) mRNA, partial
cds
Length = 1201
Score = 222 bits (480), Expect = 4e-059
Identities = 84/190 (44%), Positives = 126/190 (66%)
Frame = +3 / +3
Query: 420 SPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADV 599
+P+++ R DV +KI YCGVC++D+ +N L S YP+VPGHE+ G V +VG++V
Sbjct: 3 TPYTYTLRNTGPDDVYIKIHYCGVCHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNV 182
Query: 600 KGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVH 779
FKVG+ VGVG V C+ C C+ ++ +C K ++++N + TDG +T+GG++ VV
Sbjct: 183 TRFKVGEIVGVGLLVGCCKSCRACDSEIEQYCNKKIWSYNDVYTDGKITQGGFAESTVVE 362
Query: 780 ERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKA 959
+++ KIP+G + APLLCAG+TVY+P+ + PG G++GLGG+GHM VK KA
Sbjct: 363 QKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKA 542
Query: 960 FGLKVTVFST 989
G VTV S+
Sbjct: 543 LGHHVTVISS 572
>gb|CO515617.1|CO515617 s13dSG47F0300031_418293 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 581
Score = 216 bits (466), Expect = 4e-057
Identities = 85/152 (55%), Positives = 106/152 (69%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SGVLSP +F+RR DV+ KI+YCG+C++DV +N+ S YPLVPGHEI
Sbjct: 126 WAARDTSGVLSPFNFSRRETGEKDVAFKILYCGICHSDVCMAKNEWGISTYPLVPGHEIV 305
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G+VT+VG+ V+ F VGD VGVG ++SCR C+NC +L+N+CPK T DGT+T
Sbjct: 306 GIVTKVGSKVEKFNVGDKVGVGYIIDSCRSCQNCVDNLENYCPKYTTTIGAKHRDGTITY 485
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLCA 845
GGYS +V E Y IPDG PL AAPLLCA
Sbjct: 486 GGYSDSLVADENYMVHIPDGLPLEAAAPLLCA 581
Score = 122 bits (262), Expect = 5e-029
Identities = 73/152 (48%), Positives = 81/152 (53%)
Frame = -1 / -2
Query: 844 AHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQF 665
A RRGAA + G PSG+ S T E*PP+V VPS + V GQ SR QF
Sbjct: 580 AQRRGAAASSGKPSGM*TM*FSSATNESE*PPYVMVPSRCLAPIVVVYLGQ*FSRLSTQF 401
Query: 664 SQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTP 485
R E PTPT SPTL T PT VT P ISCPGT G + F TS * P
Sbjct: 400 *HDRHESIM*PTPTLSPTLNFSTLLPTFVTIPTISCPGTSG*VDMPHSFFAMQTSE*HIP 221
Query: 484 QYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
QY I + TS +L KL GERTP+ SLAAQ
Sbjct: 220 QYNILNATSFSPVSLLEKLKGERTPDVSLAAQ 125
>gb|CO513877.1|CO513877 s13dSG73F0500043_156416 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 539
Score = 211 bits (456), Expect = 9e-056
Identities = 83/151 (54%), Positives = 104/151 (68%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SGVLSP +F+RR DV+ KI+YCG+C++DV +N+ S YPLVPGHEI
Sbjct: 86 WAARDTSGVLSPFNFSRRETGEKDVAFKILYCGICHSDVCMAKNEWGISTYPLVPGHEIV 265
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G+VT+VG+ V+ F VGD VGVG ++SCR C+NC +L+N+CP T DGT+T
Sbjct: 266 GIVTKVGSKVEKFNVGDKVGVGYIIDSCRSCQNCVDNLENYCPTYTTTIGAKHRDGTITY 445
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAPLLC 842
GGYS +V E Y IPDG PL AAPLLC
Sbjct: 446 GGYSDSLVADENYVVHIPDGLPLEAAAPLLC 538
Score = 120 bits (256), Expect = 3e-028
Identities = 72/150 (48%), Positives = 80/150 (53%)
Frame = -1 / -3
Query: 838 RRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQ 659
RRGAA + G PSG+ S T E*PP+V VPS + V GQ SR QF
Sbjct: 534 RRGAAASSGKPSGM*TT*FSSATNESE*PPYVMVPSRCLAPIVVVYVGQ*FSRLSTQF*H 355
Query: 658 SRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQY 479
R E PTPT SPTL T PT VT P ISCPGT G + F TS * PQY
Sbjct: 354 DRHESIM*PTPTLSPTLNFSTLLPTFVTIPTISCPGTSG*VDMPHSFFAMQTSE*HIPQY 175
Query: 478 MIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
I + TS +L KL GERTP+ SLAAQ
Sbjct: 174 NILNATSFSPVSLLEKLKGERTPDVSLAAQ 85
>gb|CO511976.1|CO511976 s13dSG07C1100086_103852 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 575
Score = 202 bits (436), Expect = 5e-053
Identities = 80/148 (54%), Positives = 100/148 (67%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SGVLSP +F+RR DV+ KI+YCG+C++DV +N+ S YPLVPGHEI
Sbjct: 132 WAARDTSGVLSPFNFSRRETGEKDVAFKILYCGICHSDVCMAKNEWGISTYPLVPGHEIV 311
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G+VT+VG+ V+ F VGD VGVG ++SCR C+NC +L+N+CP T DGT T
Sbjct: 312 GIVTKVGSKVEKFNVGDKVGVGYIIDSCRSCQNCVDNLENYCPAYTTTIGARHRDGTTTY 491
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAAP 833
GGYS +V E Y IPDG PL AAP
Sbjct: 492 GGYSDSLVADENYVVHIPDGLPLEAAAP 575
Score = 115 bits (246), Expect = 8e-027
Identities = 70/148 (47%), Positives = 78/148 (52%)
Frame = -1 / -2
Query: 832 GAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSR 653
GAA + G PSG+ S T E*PP+V VPS + V GQ SR QF R
Sbjct: 574 GAAASSGKPSGM*TT*FSSATNESE*PPYVVVPSRCLAPIVVVYAGQ*FSRLSTQF*HDR 395
Query: 652 QEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMI 473
E PTPT SPTL T PT VT P ISCPGT G + F TS * PQY I
Sbjct: 394 HESIM*PTPTLSPTLNFSTLLPTFVTIPTISCPGTSG*VDMPHSFFAMQTSE*HIPQYNI 215
Query: 472 FSETSPLCTALRLKLCGERTPEGSLAAQ 389
+ TS +L KL GERTP+ SLAAQ
Sbjct: 214 LNATSFSPVSLLEKLKGERTPDVSLAAQ 131
>gb|CO512794.1|CO512794 s13dSG88G0900068_121514 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 564
Score = 198 bits (427), Expect = 9e-052
Identities = 78/147 (53%), Positives = 99/147 (67%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD SGVLSP +F+RR DV+ KI+YCG+C++DV +N+ YPLVPGHEI
Sbjct: 124 WAARDTSGVLSPFNFSRRETGEKDVAFKILYCGICHSDVCMAKNEWGIPTYPLVPGHEIV 303
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G+VT+VG+ V+ F VGD VGVG ++SCR C+NC +L+N+CP T DGT+T
Sbjct: 304 GIVTKVGSKVEKFNVGDKVGVGYIIDSCRSCQNCVDNLENYCPTYTTTIGAKHRDGTITY 483
Query: 750 GGYSTHIVVHERYCFKIPDGYPLAKAA 830
GGYS +V E Y IPDG PL AA
Sbjct: 484 GGYSDSLVADENYVVHIPDGLPLEAAA 564
Score = 111 bits (236), Expect = 2e-025
Identities = 69/147 (46%), Positives = 76/147 (51%)
Frame = -1 / -2
Query: 829 AAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQ 650
AA + G PSG+ S T E*PP+V VPS + V GQ SR QF R
Sbjct: 563 AAASSGKPSGM*TT*FSSATNESE*PPYVMVPSRCLAPIVVVYVGQ*FSRLSTQF*HDRH 384
Query: 649 EFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIF 470
E PTPT SPTL T PT VT P ISCPGT G F TS * PQY I
Sbjct: 383 ESIM*PTPTLSPTLNFSTLLPTFVTIPTISCPGTSG*VGMPHSFFAMQTSE*HIPQYNIL 204
Query: 469 SETSPLCTALRLKLCGERTPEGSLAAQ 389
+ TS +L KL GERTP+ SLAAQ
Sbjct: 203 NATSFSPVSLLEKLKGERTPDVSLAAQ 123
>gb|CO516989.1|CO516989 s13dSG81E1000081_468524 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 497
Score = 198 bits (426), Expect = 1e-051
Identities = 76/138 (55%), Positives = 101/138 (73%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARDPSGVLSP +F+RR DV+ K++YCG+C++D+ +N+ S YPLVPGHE+A
Sbjct: 84 WAARDPSGVLSPFNFSRRETGETDVAFKVLYCGICHSDLHMVKNEWGTSIYPLVPGHELA 263
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
GVVT+VG+ V+ FKVGD VGVG ++SCR C++CN +L+N+CPK V T DGTVT
Sbjct: 264 GVVTEVGSKVEKFKVGDKVGVGYLIDSCRSCQDCNDNLENYCPKFVVTCGAKYRDGTVTY 443
Query: 750 GGYSTHIVVHERYCFKIP 803
GGYS +V E + +IP
Sbjct: 444 GGYSDSMVADEHFVIRIP 497
Score = 111 bits (238), Expect = 1e-025
Identities = 66/131 (50%), Positives = 72/131 (54%)
Frame = -1 / -2
Query: 781 SWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKP 602
S T+ E*PP+VTVPS + V T GQ SR LQ R E PTPT SPTL
Sbjct: 475 SSATIESE*PPYVTVPSRYLAPHVTTNLGQ*FSRLSLQS*HDRHESIK*PTPTLSPTLNF 296
Query: 601 LTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCG 422
T PT VTTPA SCPGT G E F S * PQY + TS +L KL G
Sbjct: 295 STLLPTSVTTPASSCPGTSG*MEVPHSFFTIWRSE*HIPQYKTLNATSVSPVSLLEKLKG 116
Query: 421 ERTPEGSLAAQ 389
ERTP+GSLAAQ
Sbjct: 115 ERTPDGSLAAQ 83
>gb|CO514202.1|CO514202 s13dSG70F0200015_157066 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 365
Score = 98.2 bits (208), Expect = 1e-021
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD G LSP +F+RR DV+ KI+ G+C++DV +N+ S YPL PGHEI
Sbjct: 130 WAARDTCGGLSPFNFSRRETSEKDVAFKILDWGICHSDVCMAKNEWGISTYPLXPGHEIG 309
Query: 570 GVVTQVGADVKGFKVGD 620
G+VT+VG+ V+ F GD
Sbjct: 310 GIVTKVGSKVEKFNGGD 360
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 8,808,053
Number of Sequences: 7669
Number of extensions: 127977
Number of successful extensions: 1120
Number of sequences better than 1.0e-020: 13
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 262777086
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)