TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2440503.2.1
         (542 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO512201.1|CO512201  s13dSG03B1200093_113916 Glandular tr...    73   3e-025

>gb|CO512201.1|CO512201 s13dSG03B1200093_113916 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 607

 Score = 72.5 bits (152), Expect(3) = 3e-025
 Identities = 26/41 (63%), Positives = 31/41 (75%)
 Frame = +3 / +3

                                                    
Query: 3   RADPATGYPGRTYRFYRGPTVFNFGYGLSYSKYSHRFATKP 125
           RADPATGYPGRTYRFY+G TVF+FG G+S+    H+    P
Sbjct: 24  RADPATGYPGRTYRFYKGETVFSFGDGMSFGTVEHKIVKAP 146




 Score = 39.6 bits (80), Expect(3) = 3e-025
 Identities = 18/65 (27%), Positives = 29/65 (44%)
 Frame = +3 / +3

                                                                       
Query: 336 PASQLIGFQSLHLRATQTAHVEFEVSPCKHFSRATEDGRKVIDQGSHFVMVGEDEFEMSF 515
           P   L+GF+ + L       V F+V  C   S   E G + +  G H + VG  +  +S 
Sbjct: 336 PQKHLLGFEKVQLAGKSEGMVRFKVDVCNDLSVVDELGNRKVPLGDHMLHVGNLKHSLSV 515

                
Query: 516 MA*SR 530
             *++
Sbjct: 516 RI*NK 530




 Score = 34.5 bits (69), Expect(3) = 3e-025
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3 / +3

                                                
Query: 204 IGSETCDRLKFPAVVRVQNHGPMDGKHSVLVFMRWPN 314
           +  + C  L F   + V+N G M   HSVL+F   PN
Sbjct: 213 VADKHCQNLAFDIHLSVKNMGKMSSSHSVLLFFTPPN 323



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 2,856,170
Number of Sequences: 7669
Number of extensions: 32036
Number of successful extensions: 800
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 41
effective length of database: 934,139
effective search space used: 129845321
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)