TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2192481.2.2
         (1053 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO511760.1|CO511760  s13dSG01G0500040_103420 Glandular tr...    61   3e-027

>gb|CO511760.1|CO511760 s13dSG01G0500040_103420 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 554

 Score = 60.6 bits (126), Expect(3) = 3e-027
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = -2 / +3

                                          
Query: 773 FGYEAPLLRQIADKVAKAGYFVVVPDFLKGD 681
           +GYEAP LR++ADKVA AGY+VVVPDFL G+
Sbjct: 180 YGYEAPNLRKLADKVAAAGYYVVVPDFLNGE 272




 Score = 60.2 bits (125), Expect(3) = 3e-027
 Identities = 26/62 (41%), Positives = 35/62 (56%)
 Frame = -2 / +3

                                                                       
Query: 596 AALKKEGKSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQ 417
           A   K   SV   G+CWG K+  E+ K+  ++A  L HP  V+ DD+K V  P  ILGA+
Sbjct: 369 AIKSKGVSSVGAAGFCWGAKVVTELXKSRLIQAAVLLHPSFVSVDDIKGVDIPFSILGAE 548

             
Query: 416 ND 411
            D
Sbjct: 549 ID 554




 Score = 33.6 bits (67), Expect(3) = 3e-027
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2 / +3

                                      
Query: 650 WLEAHSPVKAAEDAKPLFAALKKEGKS 570
           W++ H   K  EDAKP+  A+K +G S
Sbjct: 312 WIKDHGTDKGFEDAKPIIEAIKSKGVS 392



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 7,209,511
Number of Sequences: 7669
Number of extensions: 82119
Number of successful extensions: 741
Number of sequences better than 1.0e-020: 2
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 282071907
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)