TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 1805139.2.1
         (950 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO515289.1|CO515289  s13dSG48B1200101_417637 Glandular tr...   138   3e-055

>gb|CO515289.1|CO515289 s13dSG48B1200101_417637 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 603

 Score =  138 bits (297), Expect(2) = 3e-055
 Identities = 53/79 (67%), Positives = 62/79 (78%)
 Frame = -2 / +3

                                                                       
Query: 880 AAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVL 701
           AA   SF GT  KC AC+KTVY VD+L+AD   YHKACFRC HCKGTLKL++Y+S EGVL
Sbjct: 153 AAATMSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVL 332

                              
Query: 700 YCRPHFDQLFKRTGSLDKS 644
           YCRPHF+QLFK  G+  K+
Sbjct: 333 YCRPHFEQLFKEHGNFSKN 389




 Score =  101 bits (216), Expect = 1e-022
 Identities = 37/76 (48%), Positives = 53/76 (69%)
 Frame = -2 / +3

                                                                       
Query: 571 AFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHH 392
           +F GT++KC  C KTVYP ++++ + T YHK+CF+C H   T+  S+Y + EG LYC+ H
Sbjct: 168 SFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCRPH 347

                           
Query: 391 HIQLIKEKGNFSQLEN 344
             QL KE GNFS+ +N
Sbjct: 348 FEQLFKEHGNFSKNKN 395




 Score = 91.3 bits (193), Expect(2) = 3e-055
 Identities = 35/72 (48%), Positives = 44/72 (61%)
 Frame = -2 / +3

                                                                       
Query: 658 SLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHK 479
           S +K+F+   KV      V     +K +  F+GT+EKC  C KT YP E+VTV +  YHK
Sbjct: 381 SKNKNFQSPAKVADGTTPVLTRTPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHK 560

                       
Query: 478 SCFKCCHGGCTI 443
           SCFKC HGGC I
Sbjct: 561 SCFKCSHGGCPI 596



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 8,172,108
Number of Sequences: 7669
Number of extensions: 121465
Number of successful extensions: 1232
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 250832673
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)