TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 1805013.2.2
         (964 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CO515748.1|CO515748  s13dSG77D0400042_419645 Glandular tr...   324   1e-089

>gb|CO515748.1|CO515748 s13dSG77D0400042_419645 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 553

 Score =  324 bits (701), Expect = 1e-089
 Identities = 129/142 (90%), Positives = 139/142 (97%)
 Frame = +1 / +1

                                                                       
Query: 91  FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
           FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDT+IRKEV+++P+VLRE RRII
Sbjct: 82  FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPAVLRECRRII 261

                                                                       
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
            +S+IMKEDD+NWPEPDR+GRQELEIVMGNEHISFTTSKIGSLVDVQSS DPEGLRIFYY
Sbjct: 262 SDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYY 441

                                 
Query: 451 LVQDLKCFVFSLINLHFKIKPI 516
           LVQDLKCFVFSLI+LHFKIKPI
Sbjct: 442 LVQDLKCFVFSLISLHFKIKPI 507




 Score =  191 bits (412), Expect = 1e-049
 Identities = 97/143 (67%), Positives = 108/143 (75%)
 Frame = -3 / -3

                                                                       
Query: 518 WIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISS 339
           +IGLILK   + E TKHF+S TR**K+R PSGS L  TSTREPILEVV E+CS P+TISS
Sbjct: 509 YIGLILK*SEIREKTKHFKS*TR**KMRRPSGSALL*TSTREPILEVVKEICSFPITISS 330

                                                                       
Query: 338 SCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSG 159
           S RP RSGSGQLLSSSF+IS S +I   SRRT G   TSLR+MVSF          LPSG
Sbjct: 329 S*RPTRSGSGQLLSSSFIISLSEIIRRHSRRTAGVR*TSLRMMVSFL*LELLA*RSLPSG 150

                                  
Query: 158 RNSNSRNSCPNLPLCPT*YRR*N 90
           RNSNS+NSCPNLPL PT*Y +*N
Sbjct: 149 RNSNSKNSCPNLPL*PT*YLK*N 81



  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 7,408,388
Number of Sequences: 7669
Number of extensions: 102575
Number of successful extensions: 1096
Number of sequences better than 1.0e-020: 1
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 254507877
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)