TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716286.2.1
(1104 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW698442.1|AW698442 G296 glandular-haired subtracted cDN... 246 3e-066
gb|AW698617.1|AW698617 g513 glandular-haired subtracted cDN... 234 1e-062
gb|CO514742.1|CO514742 s13dSG55F0200027_328144 Glandular tr... 177 3e-045
gb|CO512153.1|CO512153 s13dSG34E0900067_108626 Glandular tr... 171 1e-043
gb|CO514801.1|CO514801 s13dSG59D0300030_328262 Glandular tr... 171 1e-043
gb|CO515876.1|CO515876 s13dSG91B0900075_421291 Glandular tr... 164 2e-041
gb|CO511830.1|CO511830 s13dSG02E0400035_103560 Glandular tr... 164 2e-041
gb|CO514307.1|CO514307 s13dSG76H0900076_157276 Glandular tr... 161 1e-040
gb|CO512082.1|CO512082 s13dSG18F0600047_108484 Glandular tr... 160 2e-040
gb|CO512439.1|CO512439 s13dSG80H0800064_114392 Glandular tr... 144 3e-035
gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier pr... 144 3e-035
gb|CO516470.1|CO516470 s13dSG28C0900068_446268 Glandular tr... 142 9e-035
gb|CO512021.1|CO512021 s13dSG07H0700064_103942 Glandular tr... 137 2e-033
gb|CO512178.1|CO512178 s13dSG34H1100092_108676 Glandular tr... 134 2e-032
gb|CO514418.1|CO514418 s13dSG36D0500044_327496 Glandular tr... 132 7e-032
gb|AW698741.1|AW698741 r315 non-glandular-haired subtracted... 107 2e-030
gb|CO516360.1|CO516360 s13dSG99F0200015_446048 Glandular tr... 122 8e-029
gb|CO517244.1|CO517244 s13dSG32E0500039_486084 Glandular tr... 100 5e-022
>gb|AW698442.1|AW698442 G296 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 345
Score = 246 bits (532), Expect = 3e-066
Identities = 101/105 (96%), Positives = 103/105 (98%)
Frame = -3 / -2
Query: 967 MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFL 788
MANSNLPRRIIKETQR LSEPAPGISASPSE+NMRYFNVMILGP QSPYEGGVFKL+LFL
Sbjct: 317 MANSNLPRRIIKETQRXLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLDLFL 138
Query: 787 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 653
PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 137 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 3
Score = 158 bits (339), Expect = 1e-039
Identities = 76/106 (71%), Positives = 80/106 (75%)
Frame = +3 / +1
Query: 651 TVRI*SAGLHLSLRMSRHILPSLSMLG**ILVRNLTFGAAMGYXXXXXXXXXXXXXXXXD 830
TVRI* AGLHLS R+SRHILPSLSMLG* I V+NLTFGAA+GY D
Sbjct: 1 TVRI*RAGLHLSFRISRHILPSLSMLG*YIFVKNLTFGAAIGYSSGKNRSSLKTPPS*GD 180
Query: 831 CAGPRIITLK*RMFSSEGDALIPGAGSLSSRCVSLMIRRGRLLLAI 968
GPRIITLK R+ SSEGDALIPGAGSLS RCVSLMI RGRLLLAI
Sbjct: 181 *VGPRIITLKYRILSSEGDALIPGAGSLSXRCVSLMILRGRLLLAI 318
Score = 117 bits (251), Expect = 2e-027
Identities = 50/104 (48%), Positives = 66/104 (63%)
Frame = +2 / +3
Query: 656 SNLKCWAPFVLENVEAYPTKLVNVGMINLGQKPNLWGSHGIFLR*KEFKLKNSTFIGRLR 835
+NLK P + +N++ YP KLVNV MI Q+P+LW SH IF R K L+NS FI RL
Sbjct: 6 ANLKGGTPLIFQNIKTYPAKLVNVRMIYFCQEPDLWSSHWIFFRQK*V*LENSPFIRRLS 185
Query: 836 RPKDHNVEVAHVLLRGRRADPRRWLAEQSLRLLDDPPREVAVGH 967
KDH++E+ H++ R + RRWL E +L LDD R+V V H
Sbjct: 186 WAKDHHIEIPHIVFRRGCTNSRRWLTEXTLCFLDDSSRKVTVSH 317
Score = 96.8 bits (205), Expect = 4e-021
Identities = 49/106 (46%), Positives = 70/106 (66%)
Frame = -2 / -1
Query: 971 SDGQQQPPAADHQGDAATAQRASAGDQRVALGGEHALLQRYDPWAGAVAL*RWSF*A*TL 792
++G Q P + +HQG+ A AQ ASA + + G ++A+ Q DPW +V+L*R SF A +
Sbjct: 321 NNG*Q*PSSKNHQGNTAXAQ*ASAWN*CIPFGRQYAVFQCDDPWPNSVSL*RGSFQARPI 142
Query: 791 FT*GISHGCPKG*VSDQDLSSQH*QAW*DMPRHSQGQMEPSTSDSN 654
F * IS+GC KG V D+++SS H*QAW DM +S+ +E SDS+
Sbjct: 141 FA*RISNGCSKGQVLDKNISS*H*QAWQDMS*YSER*VESRPSDSH 4
>gb|AW698617.1|AW698617 g513 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 344
Score = 234 bits (506), Expect = 1e-062
Identities = 97/100 (97%), Positives = 97/100 (97%)
Frame = -3 / -1
Query: 952 LPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYP 773
LPRRIIKETQRLLSEPAPGI ASPSE NMRYFNVMILGP QSPYEGGVFKLELFLPEEYP
Sbjct: 302 LPRRIIKETQRLLSEPAPGIRASPSEVNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYP 123
Query: 772 MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 653
MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT
Sbjct: 122 MAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRT 3
Score = 145 bits (311), Expect = 1e-035
Identities = 69/101 (68%), Positives = 74/101 (73%)
Frame = +3 / +1
Query: 651 TVRI*SAGLHLSLRMSRHILPSLSMLG**ILVRNLTFGAAMGYXXXXXXXXXXXXXXXXD 830
TVRI* AGLHLS R+SRHILPSLSMLG* I V+NLTFGAA+GY D
Sbjct: 1 TVRI*RAGLHLSFRISRHILPSLSMLG*YIFVKNLTFGAAIGYSSGKNSSSLKTPPS*GD 180
Query: 831 CAGPRIITLK*RMFSSEGDALIPGAGSLSSRCVSLMIRRGR 953
GPRIITLK R+ +SEGDA IPGAGSLS RCVSLMI RGR
Sbjct: 181 *VGPRIITLKYRILTSEGDARIPGAGSLSKRCVSLMILRGR 303
Score = 114 bits (243), Expect = 2e-026
Identities = 50/100 (50%), Positives = 64/100 (64%)
Frame = +2 / +3
Query: 656 SNLKCWAPFVLENVEAYPTKLVNVGMINLGQKPNLWGSHGIFLR*KEFKLKNSTFIGRLR 835
+NLK P + +N++ YP KLVNV MI Q+ NLW SH IF R K F L+NS FI RL
Sbjct: 6 ANLKGRTPLIFQNIKTYPAKLVNVRMIYFCQESNLWSSHWIFFRQK*F*LENSPFIRRLS 185
Query: 836 RPKDHNVEVAHVLLRGRRADPRRWLAEQSLRLLDDPPREV 955
KDH++E+ H+ R + RRWL EQ+L LDD R+V
Sbjct: 186 WAKDHHIEIPHIDFRRGCTNSRRWLTEQTLCFLDDSSRKV 305
Score = 100 bits (214), Expect = 2e-022
Identities = 48/100 (48%), Positives = 68/100 (68%)
Frame = -2 / -3
Query: 953 PPAADHQGDAATAQRASAGDQRVALGGEHALLQRYDPWAGAVAL*RWSF*A*TLFT*GIS 774
P + +HQG+ A AQ ASA + + G ++A+ Q DPW +V+L*R SF A T+F * IS
Sbjct: 303 PSSKNHQGNTAFAQ*ASAWNSCIPFGSQYAVFQCDDPWPNSVSL*RGSFQARTIFA*RIS 124
Query: 773 HGCPKG*VSDQDLSSQH*QAW*DMPRHSQGQMEPSTSDSN 654
+GC KG*+ D+++SS H*QAW DM +S+ +E SDS+
Sbjct: 123 NGCSKG*ILDKNISS*H*QAWQDMS*YSER*VESCPSDSH 4
>gb|CO514742.1|CO514742 s13dSG55F0200027_328144 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 526
Score = 177 bits (380), Expect = 3e-045
Identities = 72/145 (49%), Positives = 97/145 (66%)
Frame = -3 / +2
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 83 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 262
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 587
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +L++ PNPDDPL I
Sbjct: 263 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLVTDPNPDDPLVPEI 442
Query: 586 AKHWKSNEVEAVETAKEWTRLYASG 512
A +K++ + TA+ WT+ YA G
Sbjct: 443 AHMYKTDRTKYEATARSWTQKYAMG 517
>gb|CO512153.1|CO512153 s13dSG34E0900067_108626 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 582
Score = 171 bits (369), Expect = 1e-043
Identities = 70/143 (48%), Positives = 97/143 (67%)
Frame = -3 / +1
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+RI KE + L +P SA P E++ ++ I+GPA SPY GGVF + + P +YP
Sbjct: 94 KRITKELKDLQKDPPVSCSAGPVGEDLFHWQATIMGPADSPYAGGVFLVTIHFPPDYPSK 273
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 587
PKV F TK++HPNI+ G ICLDILK++WSPAL + VLLSI +LL+ PNPDDPL +I
Sbjct: 274 PPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPDI 453
Query: 586 AKHWKSNEVEAVETAKEWTRLYA 518
A +K+++ + TA+ WT+ YA
Sbjct: 454 AHMYKTDKAKYETTARSWTQKYA 522
>gb|CO514801.1|CO514801 s13dSG59D0300030_328262 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 586
Score = 171 bits (369), Expect = 1e-043
Identities = 71/145 (48%), Positives = 95/145 (65%)
Frame = -3 / +1
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 94 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYTGGVFLVSIHFPPDYPFK 273
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 587
PK F TK++HPNI+ G ICLDILK++WSPAL I LLSI +LL+ PNPDDPL I
Sbjct: 274 PPKGAFRTKVFHPNINSNGSICLDILKEQWSPALTISKGLLSICSLLTDPNPDDPLVPEI 453
Query: 586 AKHWKSNEVEAVETAKEWTRLYASG 512
A +K++ + TA+ WT+ YA G
Sbjct: 454 AHMYKTDRAKYEATARSWTQKYAMG 528
>gb|CO515876.1|CO515876 s13dSG91B0900075_421291 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 518
Score = 164 bits (353), Expect = 2e-041
Identities = 70/145 (48%), Positives = 94/145 (64%)
Frame = -3 / +3
Query: 964 ANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLP 785
+NS +RI+KE + L +P SA P E+M ++ I+GP SPY GGVF + + P
Sbjct: 84 SNSMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFP 263
Query: 784 EEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDD 605
+YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDD
Sbjct: 264 PDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDD 443
Query: 604 PLSDNIAKHWKSNEVEAVETAKEWT 530
PL IA +K++ + TA+ T
Sbjct: 444 PLVPEIAHMYKTDRSKYETTARSRT 518
>gb|CO511830.1|CO511830 s13dSG02E0400035_103560 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 519
Score = 164 bits (352), Expect = 2e-041
Identities = 67/139 (48%), Positives = 91/139 (65%)
Frame = -3 / +1
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+RI KE + L +P SA P ++M ++ I+GP SP+ GGVF +++ P +YP
Sbjct: 103 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPGDSPFAGGVFLVQIHFPPDYPFK 282
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 587
PKV F TK++HPNI+ G ICLDILK++WSPA I VLLSI +LL+ PNPDDPL I
Sbjct: 283 PPKVSFRTKVFHPNINSNGSICLDILKEQWSPAFTISKVLLSICSLLTDPNPDDPLVPEI 462
Query: 586 AKHWKSNEVEAVETAKEWT 530
A +KS + + TA+ WT
Sbjct: 463 AHMYKSXQAKYGATARSWT 519
>gb|CO514307.1|CO514307 s13dSG76H0900076_157276 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 490
Score = 161 bits (347), Expect = 1e-040
Identities = 68/135 (50%), Positives = 89/135 (65%)
Frame = -3 / +1
Query: 970 PMANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELF 791
P S +RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + +
Sbjct: 85 PFDLSMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIH 264
Query: 790 LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 611
P +YP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNP
Sbjct: 265 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNP 444
Query: 610 DDPLSDNIAKHWKSN 566
DDPL IA +K++
Sbjct: 445 DDPLVPEIAHMYKTD 489
>gb|CO512082.1|CO512082 s13dSG18F0600047_108484 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 587
Score = 160 bits (345), Expect = 2e-040
Identities = 66/127 (51%), Positives = 87/127 (68%)
Frame = -3 / +3
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 207 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 386
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 587
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL I
Sbjct: 387 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 566
Query: 586 AKHWKSN 566
A +K++
Sbjct: 567 AHMYKTD 587
>gb|CO512439.1|CO512439 s13dSG80H0800064_114392 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 567
Score = 144 bits (308), Expect = 3e-035
Identities = 55/137 (40%), Positives = 88/137 (64%)
Frame = -3 / +3
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 93 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 272
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 587
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P +
Sbjct: 273 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 452
Query: 586 AKHWKSNEVEAVETAKE 536
A+ + N+ E +E
Sbjct: 453 ARMFSENKREYNRRVRE 503
>gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier protein mRNA, complete cds
Length = 910
Score = 144 bits (308), Expect = 3e-035
Identities = 55/137 (40%), Positives = 88/137 (64%)
Frame = -3 / +2
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 143 KRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 322
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSDNI 587
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P +
Sbjct: 323 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 502
Query: 586 AKHWKSNEVEAVETAKE 536
A+ + N+ E +E
Sbjct: 503 ARMFSENKREYNRRVRE 553
>gb|CO516470.1|CO516470 s13dSG28C0900068_446268 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 418
Score = 142 bits (304), Expect = 9e-035
Identities = 58/111 (52%), Positives = 76/111 (68%)
Frame = -3 / +3
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+RI+KE + L +P SA P E+M ++ I+GPA SPY GGVF + + P +YP
Sbjct: 84 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 263
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPN 614
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PN
Sbjct: 264 PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPN 416
>gb|CO512021.1|CO512021 s13dSG07H0700064_103942 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 584
Score = 137 bits (294), Expect = 2e-033
Identities = 51/115 (44%), Positives = 79/115 (68%)
Frame = -3 / +2
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 230 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 409
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 602
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P
Sbjct: 410 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 574
>gb|CO512178.1|CO512178 s13dSG34H1100092_108676 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 585
Score = 134 bits (287), Expect = 2e-032
Identities = 50/115 (43%), Positives = 78/115 (67%)
Frame = -3 / +2
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 230 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 409
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 602
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL P P+ P
Sbjct: 410 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPXPNSP 574
>gb|CO514418.1|CO514418 s13dSG36D0500044_327496 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 589
Score = 132 bits (283), Expect = 7e-032
Identities = 50/115 (43%), Positives = 77/115 (66%)
Frame = -3 / +2
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+R++++ +RL +P GIS +P + N+ +N +I GP +P+ GG FKL L E+YP
Sbjct: 230 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWNGGTFKLTLQFTEDYPNK 409
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 602
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PN + P
Sbjct: 410 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNXNSP 574
>gb|AW698741.1|AW698741 r315 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 335
Score = 107 bits (229), Expect(2) = 2e-030
Identities = 41/76 (53%), Positives = 53/76 (69%)
Frame = -3 / -3
Query: 892 SASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 713
SA P E+M ++ I+GPA SPY GGVF + + P +YP PKV TK++HPNI+
Sbjct: 315 SAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFKPPKVAXRTKVFHPNINSN 136
Query: 712 GRICLDILKDKWSPAL 665
G ICLDILK++WSPAL
Sbjct: 135 GSICLDILKEQWSPAL 88
Score = 40.0 bits (81), Expect(2) = 2e-030
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3 / -2
Query: 673 PALQIRTVLLSIQALLSAPNPDDPLSDNIA 584
P I VLLSI +LL+ PNPDDPL IA
Sbjct: 97 PCTDISKVLLSICSLLTDPNPDDPLVPEIA 8
>gb|CO516360.1|CO516360 s13dSG99F0200015_446048 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 396
Score = 122 bits (261), Expect = 8e-029
Identities = 45/105 (42%), Positives = 72/105 (68%)
Frame = -3 / +3
Query: 946 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMA 767
+R++++ +RL +P GIS +P + N+ +N +I GP +P++GG FKL L E+YP
Sbjct: 81 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 260
Query: 766 APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA 632
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+
Sbjct: 261 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQS 395
>gb|CO517244.1|CO517244 s13dSG32E0500039_486084 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 556
Score = 100 bits (212), Expect = 5e-022
Identities = 41/94 (43%), Positives = 58/94 (61%)
Frame = -3 / -3
Query: 817 GGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSI 638
GG FKL L E+YP P VRF+++++HPNI G ICLDIL++ WSP + +L SI
Sbjct: 554 GGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN*WSPIYDVAAILTSI 375
Query: 637 QALLSAPNPDDPLSDNIAKHWKSNEVEAVETAKE 536
Q+LL PNP+ P + A+ + N+ E +E
Sbjct: 374 QSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 273
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 9,866,293
Number of Sequences: 7669
Number of extensions: 143067
Number of successful extensions: 1115
Number of sequences better than 1.0e-020: 23
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 297691524
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)