TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 131591.2.2
         (1252 letters)

Database: MedicagoSativa_nucl_with_EST.fasta 
           7669 sequences; 3,745,706 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|X58180.1|MSPAL  M.sativa PAL mRNA for phenylalanine ammo...   278   8e-076
gb|CO514770.1|CO514770  s13dSG59A0400033_328200 Glandular tr...   199   8e-052
gb|CO515319.1|CO515319  s13dSG48E0900071_417697 Glandular tr...   188   2e-048
gb|CO514807.1|CO514807  s13dSG59D1000090_328274 Glandular tr...   181   1e-046
gb|CO516073.1|CO516073  s13dSG64H0100012_445474 Glandular tr...   150   3e-037
>emb|X58180.1|MSPAL M.sativa PAL mRNA for phenylalanine ammonia-lyase
          Length = 2409

 Score =  278 bits (602), Expect = 8e-076
 Identities = 116/136 (85%), Positives = 125/136 (91%)
 Frame = -3 / +1

                                                                        
Query: 410  RADNSVNDNPVIDVLRGKALHGGNFQGTPIGVSMDNARLAVANIGKLMFAQFSELVNEFY 231
            R  NSVNDNP+IDV R KALHGGNFQGTPIGVSMDN RLA+A+IGKLMFAQFSELVN+FY
Sbjct: 1249 REINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFY 1428

                                                                        
Query: 230  NNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLGNPITNHVQSAEQHNQDVNSLGL 51
            NNGL SNL+ SRNPSLDYGFKG EIAMASYCSELQYL NP+T HVQSAEQHNQDVNSLGL
Sbjct: 1429 NNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTTHVQSAEQHNQDVNSLGL 1608

                            
Query: 50   VSARKTAEAIDILKLM 3
            +SARKT EAI+IL+LM
Sbjct: 1609 ISARKTNEAIEILQLM 1656

 Score =  203 bits (437), Expect = 5e-053
 Identities = 92/134 (68%), Positives = 105/134 (78%)
 Frame = +1 / -2

                                                                        
Query: 1    DMSFRMSIASAVFLAETRPREFTSWLCCSALCTWLVMGLPRYWSSEQ*DAMAISVPLNP* 180
            DMS R+S+AS VFLAE +P+EFTSWLCCSAL TW+V G  RY +SEQ*+AMAIS PL P*
Sbjct: 1658 DMS*RISMASFVFLAEIKPKEFTSWLCCSALWTWVVTGFARYCNSEQ*EAMAISAPLKP* 1479

                                                                        
Query: 181  SRLGLRLPARLEVSPLL*NSLTSSENCANMSLPMLATARRALSMDTPIGVPWKLPPCSAL 360
            S+LG  L  R E +PLL* SLTSSEN AN+SLP+ A A+R LSMDTPIGVP K PPC AL
Sbjct: 1478 SKLGFLLAERFEGNPLL*KSLTSSEN*ANISLPIDARAKRVLSMDTPIGVP*KFPPCKAL 1299

                          
Query: 361  PRRTSMTGLSFTEL 402
               TS+ GLS TEL
Sbjct: 1298 FLETSIKGLSLTEL 1257
>gb|CO514770.1|CO514770 s13dSG59A0400033_328200 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 588

 Score =  199 bits (428), Expect = 8e-052
 Identities = 75/135 (55%), Positives = 112/135 (82%)
 Frame = +2 / +1

                                                                       
Query: 539 MANARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSL 718
           MANA SG+AV+D+C LKF EL++KR HRFI +K+++K K+++V+++G+ A  Y++FT  L
Sbjct: 148 MANAASGMAVHDDCKLKFMELKAKRTHRFIVYKIEEKQKQVIVEKLGEPAEGYENFTACL 327

                                                                       
Query: 719 PENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVE 898
           P ++CRYA+YDF+++T E+V KSRIF+I WSP +A+V+SKM+YAS+ ++FK  L+GIQ+E
Sbjct: 328 PADECRYAVYDFEYLTEENVPKSRIFFIGWSPDTARVRSKMIYASTKERFKRELDGIQIE 507

                          
Query: 899 LQATDASEISLDEIK 943
           LQATD +E+ LD  K
Sbjct: 508 LQATDPTEMGLDVFK 552

 Score =  105 bits (223), Expect = 2e-023
 Identities = 63/125 (50%), Positives = 74/125 (59%)
 Frame = -2 / -2

                                                                       
Query: 909 VAWSST*MPLRPLLNFWFELA*SILLFTLAEDGDHRI*KILLFWTSSAVTKSKS*IAYRQ 730
           VA +S *+P   LLN    LA* ILL TLA  GDH + KILL  T S+V  SKS* A R 
Sbjct: 518 VACNSI*IPSSSLLNLSLVLA*IILLLTLAVSGDHPMKKILLLGTFSSVRYSKS*TA*RH 339

                                                                       
Query: 729 SFSGRLFVKSS*LVARSPTWXXXXXXXXXXXLKVMKRCSLFDCSSPNFSMHSSFTATPDL 550
           S +GR  VK S*  A SP++           L  M RC LF  SS NF++ SS+TA PD 
Sbjct: 338 SSAGRHAVKFS*PSAGSPSFSTMTCFCFSSILYTMNRCVLFALSSINFNLQSSWTAIPDA 159

                
Query: 549 AFAIS 535
           AFA+S
Sbjct: 158 AFAMS 144
>gb|CO515319.1|CO515319 s13dSG48E0900071_417697 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 644

 Score =  188 bits (404), Expect = 2e-048
 Identities = 70/135 (51%), Positives = 107/135 (79%)
 Frame = +2 / +1

                                                                       
Query: 539 MANARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSL 718
           MANA SG+AV+D+C L+F EL++KR HRFI +K+++K ++++V+++G+    Y+ F   L
Sbjct: 100 MANAASGMAVHDDCKLRFMELKAKRTHRFIIYKIEEKQRQVIVEKLGEPVEGYEQFAACL 279

                                                                       
Query: 719 PENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVE 898
           P ++CRYA++D++F+T  +V KSRIF+I WSP +++V+SKM+YASS  +FK  L+GIQ+E
Sbjct: 280 PADECRYAVFDYEFMTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIE 459

                          
Query: 899 LQATDASEISLDEIK 943
           LQATD +EI LD  K
Sbjct: 460 LQATDPTEIGLDVFK 504
>gb|CO514807.1|CO514807 s13dSG59D1000090_328274 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 529

 Score =  181 bits (390), Expect = 1e-046
 Identities = 67/128 (52%), Positives = 103/128 (80%)
 Frame = +2 / +1

                                                                       
Query: 539 MANARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSL 718
           MANA SG+AV+D+C L+F EL++KR HRFI +K+++K K+++V+++G+    Y+ F   L
Sbjct: 145 MANAASGMAVHDDCKLRFMELKAKRTHRFIIYKIEEKQKQVIVEKLGEPVEGYEQFAACL 324

                                                                       
Query: 719 PENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVE 898
           P ++CRYA++D++F+T  +V KSRIF+I WSP +++V+SKM+YASS  +FK  L+GIQ+E
Sbjct: 325 PADECRYAVFDYEFMTEGNVPKSRIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQIE 504

                   
Query: 899 LQATDASE 922
           LQATD +E
Sbjct: 505 LQATDPTE 528
>gb|CO516073.1|CO516073 s13dSG64H0100012_445474 Glandular trichomes Medicago sativa cDNA,
           mRNA sequence
          Length = 437

 Score =  150 bits (323), Expect = 3e-037
 Identities = 54/106 (50%), Positives = 86/106 (81%)
 Frame = +2 / +1

                                                                       
Query: 539 MANARSGVAVNDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSL 718
           MANA SG+AV+D+C L+F EL++KR HRFI +K+++K K+++V+++G+    Y+ F   L
Sbjct: 112 MANAASGMAVHDDCKLRFMELKAKRTHRFIIYKIEEKQKQVIVEKLGEPVEGYEQFAACL 291

                                                         
Query: 719 PENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASS 856
           P ++CRYA++D++F+T  +V KSRIF+I WSP +++V+SKM+YASS
Sbjct: 292 PADECRYAVFDYEFMTEGNVPKSRIFFIAWSPDTSRVRSKMIYASS 429
  Database: MedicagoSativa_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:23 PM
  Number of letters in database: 3,745,706
  Number of sequences in database:  7669
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 8,801,735
Number of Sequences: 7669
Number of extensions: 120291
Number of successful extensions: 935
Number of sequences better than 1.0e-020: 6
length of database: 1,248,568
effective HSP length: 43
effective length of database: 918,801
effective search space used: 342712773
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)