TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.467
(758 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U09459.1|MSU09459 Medicago sativa cultivar Chief histone... 311 6e-086
emb|X13673.1|MSHIS311 Medicago sativa H3 histone gene ALH3-1.1 309 3e-085
emb|X13674.1|MSHIS3C1 Medicago sativa mRNA for histone H3 c... 309 3e-085
gb|CO514105.1|CO514105 s13dSG75D0200014_156872 Glandular tr... 308 4e-085
gb|CO516875.1|CO516875 s13dSG98H1100094_447078 Glandular tr... 308 4e-085
gb|M35867.1|ALFHISH3A Alfalfa histone H3 (H3-1.1) gene, com... 307 1e-084
gb|U09460.1|MSU09460 Medicago sativa clone pH3c110 histone ... 302 3e-083
gb|U09461.1|MSU09461 Medicago sativa clone pH3c118 histone ... 302 3e-083
gb|U09464.1|MSU09464 Medicago sativa clone pH3c130 histone ... 302 3e-083
gb|U09465.1|MSU09465 Medicago sativa clone pH3c131 histone ... 302 3e-083
gb|CO516992.1|CO516992 s13dSG81F0300027_468530 Glandular tr... 300 2e-082
gb|CO515400.1|CO515400 s13dSG49H1000092_417859 Glandular tr... 299 3e-082
gb|CO516855.1|CO516855 s13dSG98E1100085_447038 Glandular tr... 288 6e-079
gb|CO514111.1|CO514111 s13dSG75D0800062_156884 Glandular tr... 287 8e-079
gb|U09462.1|MSU09462 Medicago sativa clone pH3c126 histone ... 282 3e-077
emb|X13675.1|MSHIS3C2 Medicago sativa mRNA for histone H3 c... 280 1e-076
gb|U09463.1|MSU09463 Medicago sativa Regen S clone pH3c127 ... 276 2e-075
emb|X13676.1|MSHIS3C3 Medicago sativa mRNA for histone H3 c... 263 2e-071
gb|CO516695.1|CO516695 s13dSG74C0500035_446718 Glandular tr... 253 2e-068
gb|U09458.1|MSU09458 Medicago sativa cultivar Chief histone... 122 6e-067
gb|CO513649.1|CO513649 s13dSG17C0300018_140080 Glandular tr... 219 4e-058
gb|CO517274.1|CO517274 s13dSG32H0900080_486144 Glandular tr... 190 2e-049
gb|AW698701.1|AW698701 R154 non-glandular-haired subtracted... 173 2e-044
gb|AW698444.1|AW698444 g394 glandular-haired subtracted cDN... 164 1e-041
gb|CO513821.1|CO513821 s13dSG73A0700049_156304 Glandular tr... 163 2e-041
emb|X13677.1|MSHIS3C4 Medicago sativa mRNA for histone H3 C... 131 9e-032
gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA... 108 4e-030
gb|CO516848.1|CO516848 s13dSG98E0300019_447024 Glandular tr... 113 3e-026
>gb|U09459.1|MSU09459 Medicago sativa cultivar Chief histone H3.1 gene, 5' region and
complete cds
Length = 922
Score = 311 bits (674), Expect = 6e-086
Identities = 136/143 (95%), Positives = 141/143 (98%)
Frame = +2 / +1
Query: 77 RTVPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 256
+ + MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ
Sbjct: 283 KLLSMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 462
Query: 257 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAK 436
KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEA+EAYLVGLFEDTNLCAIHAK
Sbjct: 463 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAK 642
Query: 437 RVTIMPKDIQLARRIRGERA*AS 505
RVTIMPKDIQLARRIRGERA*+S
Sbjct: 643 RVTIMPKDIQLARRIRGERA*SS 711
Score = 203 bits (437), Expect = 3e-053
Identities = 98/136 (72%), Positives = 102/136 (75%)
Frame = -3 / -3
Query: 495 ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKSW 316
ALSP IR AS MSLGM+VT LA*+AQRLVSSK PT+ A LW RSVLKS
Sbjct: 701 ALSPLIRLAS*MSLGMIVTLLA*IAQRLVSSKRPTK*ASAAS*RAETALLWNLRSVLKS* 522
Query: 315 AISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLG 136
AISRTRRWNGSLR+ SSVLF YLRIS ATVPG GFFTPPVAGAD RAA VASCF G
Sbjct: 521 AISRTRRWNGSLRMRSSVLF*YLRISLKATVPGLNLCGFFTPPVAGADFRAAFVASCFRG 342
Query: 135 ALPPVDFLAVCFVRAI 88
ALPPVD AVC VRAI
Sbjct: 341 ALPPVDLRAVCLVRAI 294
>emb|X13673.1|MSHIS311 Medicago sativa H3 histone gene ALH3-1.1
Length = 1089
Score = 309 bits (669), Expect = 3e-085
Identities = 135/138 (97%), Positives = 138/138 (100%)
Frame = +2 / +3
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 285 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 464
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 465 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 644
Query: 449 MPKDIQLARRIRGERA*A 502
MPKDIQLARRIRGERA*+
Sbjct: 645 MPKDIQLARRIRGERA*S 698
Score = 241 bits (520), Expect = 1e-064
Identities = 109/136 (80%), Positives = 112/136 (82%)
Frame = -3 / -3
Query: 495 ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKSW 316
A SPRIR ASW+SLGM+VTRLA*MAQRLVSSK PTR AELWKRRSVLKS
Sbjct: 691 ARSPRIRLASWISLGMIVTRLA*MAQRLVSSKRPTR*ASAASCKADTAELWKRRSVLKS* 512
Query: 315 AISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLG 136
AISRTRRW GSLR+ SSVLFWYLRISR ATVPG KR GFFTPPVAGADLRAA VASCFLG
Sbjct: 511 AISRTRRWKGSLRMRSSVLFWYLRISRRATVPGLKR*GFFTPPVAGADLRAAFVASCFLG 332
Query: 135 ALPPVDFLAVCFVRAI 88
ALPPVD AVC VRAI
Sbjct: 331 ALPPVDLRAVCLVRAI 284
>emb|X13674.1|MSHIS3C1 Medicago sativa mRNA for histone H3 clone pH3c-1
Length = 618
Score = 309 bits (669), Expect = 3e-085
Identities = 135/138 (97%), Positives = 138/138 (100%)
Frame = +2 / +1
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 64 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 243
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 244 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 423
Query: 449 MPKDIQLARRIRGERA*A 502
MPKDIQLARRIRGERA*+
Sbjct: 424 MPKDIQLARRIRGERA*S 477
Score = 241 bits (521), Expect = 7e-065
Identities = 109/136 (80%), Positives = 112/136 (82%)
Frame = -3 / -2
Query: 495 ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKSW 316
A SPRIR ASW+SLGM+VTRLA*MAQRLVSSK PTR AELWKRRSVLKS
Sbjct: 470 ARSPRIRLASWISLGMIVTRLA*MAQRLVSSKRPTR*ASAASCSADTAELWKRRSVLKS* 291
Query: 315 AISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLG 136
AISRTRRW GSLR+ SSVLFWYLRISR ATVPG KR GFFTPPVAGADLRAA VASCFLG
Sbjct: 290 AISRTRRWKGSLRMRSSVLFWYLRISRRATVPGLKR*GFFTPPVAGADLRAAFVASCFLG 111
Query: 135 ALPPVDFLAVCFVRAI 88
ALPPVD AVC VRAI
Sbjct: 110 ALPPVDLRAVCLVRAI 63
>gb|CO514105.1|CO514105 s13dSG75D0200014_156872 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 599
Score = 308 bits (668), Expect = 4e-085
Identities = 135/137 (98%), Positives = 137/137 (100%)
Frame = +2 / +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 253
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 254 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 433
Query: 449 MPKDIQLARRIRGERA* 499
MPKDIQLARRIRGERA*
Sbjct: 434 MPKDIQLARRIRGERA* 484
Score = 200 bits (432), Expect = 1e-052
Identities = 98/137 (71%), Positives = 102/137 (74%)
Frame = -3 / -3
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*ALSP I AS MSLGM+VT LA*+AQR VSSKSPT+ A LW RSVLKS
Sbjct: 483 *ALSPLILLAS*MSLGMIVTLLA*IAQRFVSSKSPTK*ASAAS*RAETALLWNLRSVLKS 304
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRRWNGSLR+ SSVLF YLRIS ATVPG GFFTPPVAGAD RAA VASCF
Sbjct: 303 *AISRTRRWNGSLRMRSSVLF*YLRISLKATVPGLNLCGFFTPPVAGADFRAAFVASCFR 124
Query: 138 GALPPVDFLAVCFVRAI 88
GALPPVD AVC VRAI
Sbjct: 123 GALPPVDLRAVCLVRAI 73
>gb|CO516875.1|CO516875 s13dSG98H1100094_447078 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 565
Score = 308 bits (668), Expect = 4e-085
Identities = 135/137 (98%), Positives = 137/137 (100%)
Frame = +2 / +3
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 69 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 248
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 249 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 428
Query: 449 MPKDIQLARRIRGERA* 499
MPKDIQLARRIRGERA*
Sbjct: 429 MPKDIQLARRIRGERA* 479
Score = 200 bits (432), Expect = 1e-052
Identities = 98/137 (71%), Positives = 102/137 (74%)
Frame = -3 / -1
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*ALSP I AS MSLGM+VT LA*+AQR VSSKSPT+ A LW RSVLKS
Sbjct: 478 *ALSPLILLAS*MSLGMIVTLLA*IAQRFVSSKSPTK*ASAAS*RAETALLWNLRSVLKS 299
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRRWNGSLR+ SSVLF YLRIS ATVPG GFFTPPVAGAD RAA VASCF
Sbjct: 298 *AISRTRRWNGSLRMRSSVLF*YLRISLKATVPGLNLCGFFTPPVAGADFRAAFVASCFR 119
Query: 138 GALPPVDFLAVCFVRAI 88
GALPPVD AVC VRAI
Sbjct: 118 GALPPVDLRAVCLVRAI 68
>gb|M35867.1|ALFHISH3A Alfalfa histone H3 (H3-1.1) gene, complete cds
Length = 1089
Score = 307 bits (665), Expect = 1e-084
Identities = 134/138 (97%), Positives = 137/138 (99%)
Frame = +2 / +3
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE
Sbjct: 285 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 464
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQSS V+ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 465 LLIRKLPFQRLVREIAQDFKTDLRFQSSVVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 644
Query: 449 MPKDIQLARRIRGERA*A 502
MPKDIQLARRIRGERA*+
Sbjct: 645 MPKDIQLARRIRGERA*S 698
Score = 241 bits (520), Expect = 1e-064
Identities = 108/136 (79%), Positives = 111/136 (81%)
Frame = -3 / -3
Query: 495 ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKSW 316
A SPRIR ASW+SLGM+VTRLA*MAQRLVSSK PTR ELWKRRSVLKS
Sbjct: 691 ARSPRIRLASWISLGMIVTRLA*MAQRLVSSKRPTR*ASAASCKADTTELWKRRSVLKS* 512
Query: 315 AISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLG 136
AISRTRRW GSLR+ SSVLFWYLRISR ATVPG KR GFFTPPVAGADLRAA VASCFLG
Sbjct: 511 AISRTRRWKGSLRMRSSVLFWYLRISRRATVPGLKR*GFFTPPVAGADLRAAFVASCFLG 332
Query: 135 ALPPVDFLAVCFVRAI 88
ALPPVD AVC VRAI
Sbjct: 331 ALPPVDLRAVCLVRAI 284
>gb|U09460.1|MSU09460 Medicago sativa clone pH3c110 histone H3.2 mRNA, complete cds
Length = 693
Score = 302 bits (654), Expect = 3e-083
Identities = 132/137 (96%), Positives = 134/137 (97%)
Frame = +2 / +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 56 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 235
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 236 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 415
Query: 449 MPKDIQLARRIRGERA* 499
MPKDIQLARRIRGERA*
Sbjct: 416 MPKDIQLARRIRGERA* 466
Score = 206 bits (444), Expect = 3e-054
Identities = 99/141 (70%), Positives = 107/141 (75%)
Frame = -3 / -1
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW +SVLKS
Sbjct: 465 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS 286
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFL
Sbjct: 285 *AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFL 106
Query: 138 GALPPVDFLAVCFVRAIGTVR 76
GALPPVD AVC VRA+ + R
Sbjct: 105 GALPPVDLRAVCLVRAMESER 43
>gb|U09461.1|MSU09461 Medicago sativa clone pH3c118 histone H3.2 mRNA, complete cds
Length = 679
Score = 302 bits (654), Expect = 3e-083
Identities = 132/137 (96%), Positives = 134/137 (97%)
Frame = +2 / +3
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 42 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 221
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 222 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 401
Query: 449 MPKDIQLARRIRGERA* 499
MPKDIQLARRIRGERA*
Sbjct: 402 MPKDIQLARRIRGERA* 452
Score = 206 bits (444), Expect = 3e-054
Identities = 99/141 (70%), Positives = 107/141 (75%)
Frame = -3 / -1
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW +SVLKS
Sbjct: 451 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS 272
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFL
Sbjct: 271 *AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFL 92
Query: 138 GALPPVDFLAVCFVRAIGTVR 76
GALPPVD AVC VRA+ + R
Sbjct: 91 GALPPVDLRAVCLVRAMESER 29
>gb|U09464.1|MSU09464 Medicago sativa clone pH3c130 histone H3.2 mRNA, complete cds
Length = 660
Score = 302 bits (654), Expect = 3e-083
Identities = 132/137 (96%), Positives = 134/137 (97%)
Frame = +2 / +3
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 18 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 197
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 198 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 377
Query: 449 MPKDIQLARRIRGERA* 499
MPKDIQLARRIRGERA*
Sbjct: 378 MPKDIQLARRIRGERA* 428
Score = 206 bits (444), Expect = 3e-054
Identities = 99/141 (70%), Positives = 107/141 (75%)
Frame = -3 / -3
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW +SVLKS
Sbjct: 427 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS 248
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFL
Sbjct: 247 *AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFL 68
Query: 138 GALPPVDFLAVCFVRAIGTVR 76
GALPPVD AVC VRA+ + R
Sbjct: 67 GALPPVDLRAVCLVRAMESER 5
>gb|U09465.1|MSU09465 Medicago sativa clone pH3c131 histone H3.2 mRNA, complete cds
Length = 617
Score = 302 bits (654), Expect = 3e-083
Identities = 132/137 (96%), Positives = 134/137 (97%)
Frame = +2 / +3
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 18 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 197
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 198 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 377
Query: 449 MPKDIQLARRIRGERA* 499
MPKDIQLARRIRGERA*
Sbjct: 378 MPKDIQLARRIRGERA* 428
Score = 206 bits (444), Expect = 3e-054
Identities = 99/141 (70%), Positives = 107/141 (75%)
Frame = -3 / -2
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW +SVLKS
Sbjct: 427 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS 248
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFL
Sbjct: 247 *AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFL 68
Query: 138 GALPPVDFLAVCFVRAIGTVR 76
GALPPVD AVC VRA+ + R
Sbjct: 67 GALPPVDLRAVCLVRAMESER 5
>gb|CO516992.1|CO516992 s13dSG81F0300027_468530 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 496
Score = 300 bits (649), Expect = 2e-082
Identities = 130/135 (96%), Positives = 132/135 (97%)
Frame = +2 / +3
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 90 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 269
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 270 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 449
Query: 449 MPKDIQLARRIRGER 493
MPKDIQLARRIRGER
Sbjct: 450 MPKDIQLARRIRGER 494
Score = 205 bits (443), Expect = 4e-054
Identities = 98/140 (70%), Positives = 106/140 (75%)
Frame = -3 / -1
Query: 495 ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKSW 316
A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW +SVLKS
Sbjct: 496 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS* 317
Query: 315 AISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLG 136
AISRTRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFLG
Sbjct: 316 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLG 137
Query: 135 ALPPVDFLAVCFVRAIGTVR 76
ALPPVD AVC VRA+ + R
Sbjct: 136 ALPPVDLRAVCLVRAMESER 77
>gb|CO515400.1|CO515400 s13dSG49H1000092_417859 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 591
Score = 299 bits (647), Expect = 3e-082
Identities = 131/141 (92%), Positives = 134/141 (95%)
Frame = +2 / +1
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 70 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 249
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLP QRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 250 LLIRKLPSQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 429
Query: 449 MPKDIQLARRIRGERA*ASSR 511
MPKDIQLA+RIRGERA* R
Sbjct: 430 MPKDIQLAKRIRGERA*GGCR 492
Score = 201 bits (434), Expect = 7e-053
Identities = 96/144 (66%), Positives = 101/144 (70%)
Frame = -3 / -2
Query: 519 HLHRDDA*ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWK 340
H R *A SPRI A+WMSLG++VTRLA +A +LVSS PTR A LWK
Sbjct: 500 HQTRHPP*ARSPRILFANWMSLGIIVTRLAWIAHKLVSSNRPTRYASAASCNASTA*LWK 321
Query: 339 RRSVLKSWAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAA 160
RRSVLKS AISRT W GS I SSVLF Y ISR ATVPGR R GF TPPV GADLRAA
Sbjct: 320 RRSVLKS*AISRTNLWEGSFLIKSSVLF*YFLISRRATVPGR*RCGFLTPPVVGADLRAA 141
Query: 159 LVASCFLGALPPVDFLAVCFVRAI 88
LVASCFLGA PPVD AVC VRAI
Sbjct: 140 LVASCFLGAFPPVDLRAVCLVRAI 69
>gb|CO516855.1|CO516855 s13dSG98E1100085_447038 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 469
Score = 288 bits (623), Expect = 6e-079
Identities = 125/132 (94%), Positives = 128/132 (96%)
Frame = +2 / +1
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 73 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 252
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHA+RVTI
Sbjct: 253 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAERVTI 432
Query: 449 MPKDIQLARRIR 484
PKDIQLARRIR
Sbjct: 433 TPKDIQLARRIR 468
Score = 198 bits (427), Expect = 7e-052
Identities = 95/136 (69%), Positives = 102/136 (75%)
Frame = -3 / -3
Query: 483 RIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKSWAISR 304
R+RRAS MSLG++VT A*+A RLVSS +PTR A LW RSVLKS AISR
Sbjct: 467 RMRRAS*MSLGVIVTLSA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLRSVLKS*AISR 288
Query: 303 TRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLGALPP 124
TRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFLGALPP
Sbjct: 287 TRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLGALPP 108
Query: 123 VDFLAVCFVRAIGTVR 76
VD AVC VRA+ + R
Sbjct: 107 VDLRAVCLVRAMESER 60
>gb|CO514111.1|CO514111 s13dSG75D0800062_156884 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 511
Score = 287 bits (622), Expect = 8e-079
Identities = 125/137 (91%), Positives = 130/137 (94%)
Frame = +2 / +1
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTAR+ST GKAPRKQLATKAARKS P TGG+KKPHR+RPGTVALREIRKYQKSTE
Sbjct: 49 MARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKSTE 228
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTI 448
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA EAYLVGLFEDTNLCAIHAKR+T+
Sbjct: 229 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRITV 408
Query: 449 MPKDIQLARRIRGERA* 499
M KDIQLARRIRGERA*
Sbjct: 409 MVKDIQLARRIRGERA* 459
Score = 190 bits (409), Expect = 2e-049
Identities = 93/137 (67%), Positives = 99/137 (72%)
Frame = -3 / -3
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPRIRRAS +SL + V LA*+A +LVSS PT+ A LW +SVLKS
Sbjct: 458 *ARSPRIRRAS*ISLTITVILLA*IAHKLVSSNKPTK*ASTAS*SARTAWLWNLKSVLKS 279
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRRWNGSLRI SSVLF YLRISR ATVPGR R GF PPV G D RAA VASCFL
Sbjct: 278 *AISRTRRWNGSLRIKSSVLF*YLRISRRATVPGR*R*GFLIPPVVGTDFRAAFVASCFL 99
Query: 138 GALPPVDFLAVCFVRAI 88
GALP VD AVCFVRAI
Sbjct: 98 GALPRVDLRAVCFVRAI 48
>gb|U09462.1|MSU09462 Medicago sativa clone pH3c126 histone H3.2 mRNA, partial cds
Length = 571
Score = 282 bits (611), Expect = 3e-077
Identities = 123/128 (96%), Positives = 125/128 (97%)
Frame = +2 / +1
Query: 116 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQ 295
KSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQ
Sbjct: 1 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQ 180
Query: 296 RLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 475
RLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 181 RLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 360
Query: 476 RIRGERA* 499
RIRGERA*
Sbjct: 361 RIRGERA* 384
Score = 192 bits (413), Expect = 6e-050
Identities = 92/127 (72%), Positives = 98/127 (77%)
Frame = -3 / -3
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW +SVLKS
Sbjct: 383 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS 204
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFL
Sbjct: 203 *AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFL 24
Query: 138 GALPPVD 118
GALPPVD
Sbjct: 23 GALPPVD 3
>emb|X13675.1|MSHIS3C2 Medicago sativa mRNA for histone H3 clone pH3c-3
Length = 513
Score = 280 bits (606), Expect = 1e-076
Identities = 122/125 (97%), Positives = 125/125 (100%)
Frame = +2 / +1
Query: 128 GKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVR 307
GKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVR
Sbjct: 1 GKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVR 180
Query: 308 EIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 487
EIAQDFKTDLRFQSSAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 181 EIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 360
Query: 488 ERA*A 502
ERA*+
Sbjct: 361 ERA*S 375
Score = 215 bits (465), Expect = 4e-057
Identities = 98/122 (80%), Positives = 101/122 (82%)
Frame = -3 / -2
Query: 495 ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKSW 316
A SPRIR ASW+SLGM+VTRLA*MAQRLVSSK PTR AELWKRRSVLKS
Sbjct: 368 ARSPRIRLASWISLGMIVTRLA*MAQRLVSSKRPTR*ASAASCSADTAELWKRRSVLKS* 189
Query: 315 AISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLG 136
AISRTRRW GSLR+ SSVLFWYLRISR ATVPG KR GFFTPPVAGADLRAA VASCFLG
Sbjct: 188 AISRTRRWKGSLRMRSSVLFWYLRISRRATVPGLKR*GFFTPPVAGADLRAAFVASCFLG 9
Query: 135 AL 130
AL
Sbjct: 8 AL 3
>gb|U09463.1|MSU09463 Medicago sativa Regen S clone pH3c127 histone H3.2 mRNA, partial
cds
Length = 595
Score = 276 bits (597), Expect = 2e-075
Identities = 120/125 (96%), Positives = 122/125 (97%)
Frame = +2 / +1
Query: 125 GGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLV 304
GGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLV
Sbjct: 1 GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLV 180
Query: 305 REIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 484
REIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Sbjct: 181 REIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 360
Query: 485 GERA* 499
GERA*
Sbjct: 361 GERA* 375
Score = 184 bits (396), Expect = 1e-047
Identities = 89/124 (71%), Positives = 95/124 (76%)
Frame = -3 / -3
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW +SVLKS
Sbjct: 374 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS 195
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFL
Sbjct: 194 *AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFL 15
Query: 138 GALP 127
GALP
Sbjct: 14 GALP 3
>emb|X13676.1|MSHIS3C3 Medicago sativa mRNA for histone H3 clone pH3c-11
Length = 579
Score = 263 bits (569), Expect = 2e-071
Identities = 115/120 (95%), Positives = 117/120 (97%)
Frame = +2 / +3
Query: 140 RKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 319
RKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ
Sbjct: 3 RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 182
Query: 320 DFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 499
DFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
Sbjct: 183 DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 362
Score = 176 bits (378), Expect = 4e-045
Identities = 86/120 (71%), Positives = 91/120 (75%)
Frame = -3 / -3
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW RSVLKS
Sbjct: 361 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLRSVLKS 182
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFL 139
AISRTRR NGSLRI SSVLFWYLRISR ATVPGR R GF TPPV GAD AALVASCFL
Sbjct: 181 *AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFL 2
>gb|CO516695.1|CO516695 s13dSG74C0500035_446718 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 434
Score = 253 bits (547), Expect = 2e-068
Identities = 109/114 (95%), Positives = 111/114 (97%)
Frame = +2 / +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 92 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 271
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIH 430
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIH
Sbjct: 272 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 433
Score = 173 bits (372), Expect = 3e-044
Identities = 83/119 (69%), Positives = 89/119 (74%)
Frame = -3 / -3
Query: 429 *MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKSWAISRTRRWNGSLRISSSVLFWY 250
*+A +LVSS +PTR A L RSVLKS AISRTRRWNGSLRI SSVLF Y
Sbjct: 432 *IAHKLVSSNNPTR*ASAAS*SARTA*L*NLRSVLKS*AISRTRRWNGSLRIKSSVLF*Y 253
Query: 249 LRISRSATVPGRKRWGFFTPPVAGADLRAALVASCFLGALPPVDFLAVCFVRAIGTVRR 73
LRISR ATVPGR R GFFTPPV GAD AALVASCFLGALPPVD AVCFVRAI + ++
Sbjct: 252 LRISRRATVPGR*RCGFFTPPVVGADFLAALVASCFLGALPPVDLRAVCFVRAIESEKK 76
>gb|U09458.1|MSU09458 Medicago sativa cultivar Chief histone H3.2 gene, 5' region and
complete cds
Length = 1676
Score = 122 bits (262), Expect(4) = 6e-067
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = +2 / +2
Query: 329 TDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 499
TDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
Sbjct: 1175 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 1345
Score = 72.1 bits (151), Expect(4) = 6e-067
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +2 / +1
Query: 227 VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL 337
V EIRKYQKSTELLIRKLPFQRLVREIAQDFK ++
Sbjct: 952 VIYSEIRKYQKSTELLIRKLPFQRLVREIAQDFKVNI 1062
Score = 62.0 bits (129), Expect(4) = 2e-038
Identities = 33/57 (57%), Positives = 38/57 (66%)
Frame = -3 / -3
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSV 328
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW RSV
Sbjct: 1344 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLRSV 1174
Score = 61.6 bits (128), Expect(4) = 6e-067
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +2 / +3
Query: 158 KAARKSAPATGGVKKPHRFRPGTVALR 238
+AARKSAP TGGVKKPHR+RPGTVALR
Sbjct: 666 QAARKSAPTTGGVKKPHRYRPGTVALR 746
Score = 59.3 bits (123), Expect(4) = 2e-038
Identities = 27/30 (90%), Positives = 27/30 (90%)
Frame = -3 / -1
Query: 327 LKSWAISRTRRWNGSLRISSSVLFWYLRIS 238
LKS AISRTRR NGSLRI SSVLFWYLRIS
Sbjct: 1052 LKS*AISRTRR*NGSLRIKSSVLFWYLRIS 963
Score = 57.0 bits (118), Expect(4) = 6e-067
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +2 / +3
Query: 89 MARTKQTARKSTGGKAPRKQLATK 160
MARTKQTARKSTGGKAPRKQLATK
Sbjct: 483 MARTKQTARKSTGGKAPRKQLATK 554
Score = 50.6 bits (104), Expect(4) = 2e-038
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -3 / -2
Query: 159 LVASCFLGALPPVDFLAVCFVRAIGTVR 76
LVASCFLGALPPVD AVC VRA+ + R
Sbjct: 553 LVASCFLGALPPVDLRAVCLVRAMESER 470
Score = 44.6 bits (91), Expect(4) = 2e-038
Identities = 19/26 (73%), Positives = 19/26 (73%)
Frame = -3 / -2
Query: 237 RSATVPGRKRWGFFTPPVAGADLRAA 160
R ATVPGR R GF TPPV GAD AA
Sbjct: 745 RRATVPGRYR*GFLTPPVVGADFLAA 668
>gb|CO513649.1|CO513649 s13dSG17C0300018_140080 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 368
Score = 219 bits (472), Expect = 4e-058
Identities = 95/100 (95%), Positives = 97/100 (97%)
Frame = +2 / +2
Query: 89 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 268
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 68 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 247
Query: 269 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAY 388
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAY
Sbjct: 248 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY 367
Score = 151 bits (324), Expect = 1e-037
Identities = 68/87 (78%), Positives = 68/87 (78%)
Frame = -3 / -3
Query: 348 LWKRRSVLKSWAISRTRRWNGSLRISSSVLFWYLRISRSATVPGRKRWGFFTPPVAGADL 169
LWKRRSVLKS AISRT W GS I SSVLF Y ISR ATVPGR R GF TPPV GADL
Sbjct: 327 LWKRRSVLKS*AISRTNLWKGSFLIKSSVLF*YFLISRRATVPGR*RCGFLTPPVVGADL 148
Query: 168 RAALVASCFLGALPPVDFLAVCFVRAI 88
RAALVASCFLGA PPVD AVC VRAI
Sbjct: 147 RAALVASCFLGAFPPVDLRAVCLVRAI 67
>gb|CO517274.1|CO517274 s13dSG32H0900080_486144 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 576
Score = 190 bits (409), Expect = 2e-049
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = +2 / -2
Query: 239 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNL 418
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNL
Sbjct: 575 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 396
Query: 419 CAIHAKRVTIMPKDIQLARRIRGERA* 499
CAIHAKRVTIMPKDIQLARRIRGERA*
Sbjct: 395 CAIHAKRVTIMPKDIQLARRIRGERA* 315
Score = 118 bits (252), Expect = 9e-028
Identities = 60/87 (68%), Positives = 65/87 (74%)
Frame = -3 / +1
Query: 498 *ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRRSVLKS 319
*A SPR+RRAS MSLG++VT LA*+A RLVSS +PTR A LW RSVLKS
Sbjct: 316 *ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLRSVLKS 495
Query: 318 WAISRTRRWNGSLRISSSVLFWYLRIS 238
AISRTRR NGSLRI SSVLFWYLRIS
Sbjct: 496 *AISRTRR*NGSLRIKSSVLFWYLRIS 576
>gb|AW698701.1|AW698701 R154 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 366
Score = 173 bits (373), Expect = 2e-044
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +2 / +2
Query: 248 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAI 427
+YQ STELLIRKLPFQRLVREIAQDFKTDLRFQSSAV+ALQEA+EAYLVGLFEDTNLCAI
Sbjct: 17 RYQGSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAI 196
Query: 428 HAKRVTIMPKDIQLARRIRGERA* 499
HAKRVTIMPKDIQLA I GERA*
Sbjct: 197 HAKRVTIMPKDIQLAPTITGERA* 268
Score = 104 bits (222), Expect = 1e-023
Identities = 55/89 (61%), Positives = 59/89 (66%)
Frame = -3 / -1
Query: 513 HRDDA*ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWKRR 334
H + *ALSP I AS +SLGM+VT LA*MAQRLVSS PTR A LW RR
Sbjct: 282 HDNQI*ALSPVIVGAS*ISLGMIVTLLA*MAQRLVSSNKPTR*ASAAS*RAETALLWNRR 103
Query: 333 SVLKSWAISRTRRWNGSLRISSSVLFWYL 247
SVLKS AISRT WNGS + SSVL WYL
Sbjct: 102 SVLKS*AISRTSLWNGSFLMRSSVLPWYL 16
>gb|AW698444.1|AW698444 g394 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 406
Score = 164 bits (352), Expect = 1e-041
Identities = 73/83 (87%), Positives = 75/83 (90%)
Frame = +2 / +1
Query: 263 TELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRV 442
TELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYL GL EDTNLCAIHAKRV
Sbjct: 1 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLAGLSEDTNLCAIHAKRV 180
Query: 443 TIMPKDIQLARRIRGERA*ASSR 511
TIMPKDIQLA RIRGERA +R
Sbjct: 181 TIMPKDIQLAMRIRGERAYGGAR 249
Score = 95.0 bits (201), Expect = 1e-020
Identities = 48/85 (56%), Positives = 53/85 (62%)
Frame = -3 / -3
Query: 519 HLHRDDA*ALSPRIRRASWMSLGMMVTRLA*MAQRLVSSKSPTRXXXXXXXXXXXAELWK 340
H R *A SPRI A+WMSLG++VTRLA +A +LVSS P R A LWK
Sbjct: 257 HQTRAPP*ARSPRILIANWMSLGIIVTRLAWIAHKLVSSDRPARYASAASCNASTA*LWK 78
Query: 339 RRSVLKSWAISRTRRWNGSLRISSS 265
RRSVLKS AISRT W GS I SS
Sbjct: 77 RRSVLKS*AISRTNLWKGSFLIKSS 3
>gb|CO513821.1|CO513821 s13dSG73A0700049_156304 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 488
Score = 163 bits (351), Expect = 2e-041
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = +2 / +2
Query: 275 IRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 454
IRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct: 5 IRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 184
Query: 455 KDIQLARRIRGERA* 499
KDIQLARRIRGERA*
Sbjct: 185 KDIQLARRIRGERA* 229
>emb|X13677.1|MSHIS3C4 Medicago sativa mRNA for histone H3 C-terminal clone pH3c-12
Length = 322
Score = 131 bits (281), Expect = 9e-032
Identities = 57/60 (95%), Positives = 60/60 (100%)
Frame = +2 / +1
Query: 323 FKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*A 502
FKTDLRFQSSAV+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*+
Sbjct: 1 FKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*S 180
>gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 553
Score = 108 bits (231), Expect(2) = 4e-030
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = +2 / +1
Query: 323 FKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 499
F+ + +V+ALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
Sbjct: 181 FQNRSQISEQSVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 357
Score = 37.3 bits (75), Expect(2) = 4e-030
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1 / +1
Query: 247 QVPEEHGAADPQAAVPAPGA*DRPGLQD 330
QVPEEH A+D + ++P +*DR G Q+
Sbjct: 106 QVPEEHRASDQETSIPTSCS*DRTGFQN 189
>gb|CO516848.1|CO516848 s13dSG98E0300019_447024 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 166
Score = 113 bits (241), Expect = 3e-026
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +2 / +3
Query: 239 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVG 397
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEA+EAYLVG
Sbjct: 6 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG 164
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 4,433,979
Number of Sequences: 7669
Number of extensions: 50119
Number of successful extensions: 702
Number of sequences better than 1.0e-020: 30
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 194558700
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)