TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.36
(834 letters)
Database: MedicagoSativa_nucl_with_EST.fasta
7669 sequences; 3,745,706 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|U09460.1|MSU09460 Medicago sativa clone pH3c110 histone ... 315 5e-087
gb|U09461.1|MSU09461 Medicago sativa clone pH3c118 histone ... 315 5e-087
gb|U09464.1|MSU09464 Medicago sativa clone pH3c130 histone ... 315 5e-087
gb|U09465.1|MSU09465 Medicago sativa clone pH3c131 histone ... 315 5e-087
gb|CO516992.1|CO516992 s13dSG81F0300027_468530 Glandular tr... 313 2e-086
gb|CO515400.1|CO515400 s13dSG49H1000092_417859 Glandular tr... 309 2e-085
gb|U09459.1|MSU09459 Medicago sativa cultivar Chief histone... 304 7e-084
emb|X13673.1|MSHIS311 Medicago sativa H3 histone gene ALH3-1.1 303 1e-083
emb|X13674.1|MSHIS3C1 Medicago sativa mRNA for histone H3 c... 303 1e-083
gb|CO514105.1|CO514105 s13dSG75D0200014_156872 Glandular tr... 303 2e-083
gb|CO514111.1|CO514111 s13dSG75D0800062_156884 Glandular tr... 303 2e-083
gb|CO516875.1|CO516875 s13dSG98H1100094_447078 Glandular tr... 303 2e-083
gb|M35867.1|ALFHISH3A Alfalfa histone H3 (H3-1.1) gene, com... 302 5e-083
gb|CO516855.1|CO516855 s13dSG98E1100085_447038 Glandular tr... 301 9e-083
gb|U09462.1|MSU09462 Medicago sativa clone pH3c126 histone ... 294 8e-081
gb|U09463.1|MSU09463 Medicago sativa Regen S clone pH3c127 ... 288 7e-079
emb|X13676.1|MSHIS3C3 Medicago sativa mRNA for histone H3 c... 275 5e-075
emb|X13675.1|MSHIS3C2 Medicago sativa mRNA for histone H3 c... 275 7e-075
gb|CO516695.1|CO516695 s13dSG74C0500035_446718 Glandular tr... 266 3e-072
gb|U09458.1|MSU09458 Medicago sativa cultivar Chief histone... 130 1e-070
gb|CO513649.1|CO513649 s13dSG17C0300018_140080 Glandular tr... 231 9e-062
gb|CO517274.1|CO517274 s13dSG32H0900080_486144 Glandular tr... 198 1e-051
gb|CO513821.1|CO513821 s13dSG73A0700049_156304 Glandular tr... 174 1e-044
gb|AW698701.1|AW698701 R154 non-glandular-haired subtracted... 174 2e-044
gb|AW698444.1|AW698444 g394 glandular-haired subtracted cDN... 171 1e-043
gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA... 109 4e-031
emb|X13677.1|MSHIS3C4 Medicago sativa mRNA for histone H3 C... 129 5e-031
gb|CO516848.1|CO516848 s13dSG98E0300019_447024 Glandular tr... 121 2e-028
>gb|U09460.1|MSU09460 Medicago sativa clone pH3c110 histone H3.2 mRNA, complete cds
Length = 693
Score = 315 bits (682), Expect = 5e-087
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +2 / +2
Query: 125 EKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 304
+ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 50 DSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 229
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 484
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 230 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 409
Query: 485 TIMPKDIQLARRIRGERA* 541
TIMPKDIQLARRIRGERA*
Sbjct: 410 TIMPKDIQLARRIRGERA* 466
Score = 207 bits (447), Expect = 1e-054
Identities = 98/138 (71%), Positives = 104/138 (75%)
Frame = -1 / -1
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN +SVLKS*
Sbjct: 462 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS* 283
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC G
Sbjct: 282 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLG 103
Query: 177 ALPPVDLRAVCFVRAIFS 124
ALPPVDLRAVC VRA+ S
Sbjct: 102 ALPPVDLRAVCLVRAMES 49
Score = 83.1 bits (175), Expect(2) = 3e-025
Identities = 38/89 (42%), Positives = 61/89 (68%)
Frame = -3 / -3
Query: 541 LRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLEV 362
L A+A +L+V H+ L ++ ++GVL+Q+++V L FL+ ++ +ALE QIRLE+
Sbjct: 466 LSTFTANATSKLNVLRHNCHPLSMNCTQIGVLKQSNQVSLSCFLKCKNCMALESQIRLEI 287
Query: 361 LSDLTDQALEGQLPDQQLRALLVLADLAQ 275
LS+ TD+ L+ +L DQ+L LLVL DL +
Sbjct: 286 LSNFTDKTLKWKLADQKLGTLLVLTDLTK 200
Score = 48.7 bits (100), Expect(2) = 3e-025
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2 / -1
Query: 107 ISSLPASCLRGALPPVDLRAVCFVRAIFS 21
+++L ASC GALPPVDLRAVC VRA+ S
Sbjct: 135 LAALVASCFLGALPPVDLRAVCLVRAMES 49
>gb|U09461.1|MSU09461 Medicago sativa clone pH3c118 histone H3.2 mRNA, complete cds
Length = 679
Score = 315 bits (682), Expect = 5e-087
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +2 / +3
Query: 125 EKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 304
+ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 36 DSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 215
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 484
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 216 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 395
Query: 485 TIMPKDIQLARRIRGERA* 541
TIMPKDIQLARRIRGERA*
Sbjct: 396 TIMPKDIQLARRIRGERA* 452
Score = 207 bits (447), Expect = 1e-054
Identities = 98/138 (71%), Positives = 104/138 (75%)
Frame = -1 / -1
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN +SVLKS*
Sbjct: 448 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS* 269
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC G
Sbjct: 268 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLG 89
Query: 177 ALPPVDLRAVCFVRAIFS 124
ALPPVDLRAVC VRA+ S
Sbjct: 88 ALPPVDLRAVCLVRAMES 35
Score = 83.1 bits (175), Expect(2) = 3e-025
Identities = 38/89 (42%), Positives = 61/89 (68%)
Frame = -3 / -3
Query: 541 LRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLEV 362
L A+A +L+V H+ L ++ ++GVL+Q+++V L FL+ ++ +ALE QIRLE+
Sbjct: 452 LSTFTANATSKLNVLRHNCHPLSMNCTQIGVLKQSNQVSLSCFLKCKNCMALESQIRLEI 273
Query: 361 LSDLTDQALEGQLPDQQLRALLVLADLAQ 275
LS+ TD+ L+ +L DQ+L LLVL DL +
Sbjct: 272 LSNFTDKTLKWKLADQKLGTLLVLTDLTK 186
Score = 48.7 bits (100), Expect(2) = 3e-025
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2 / -1
Query: 107 ISSLPASCLRGALPPVDLRAVCFVRAIFS 21
+++L ASC GALPPVDLRAVC VRA+ S
Sbjct: 121 LAALVASCFLGALPPVDLRAVCLVRAMES 35
>gb|U09464.1|MSU09464 Medicago sativa clone pH3c130 histone H3.2 mRNA, complete cds
Length = 660
Score = 315 bits (682), Expect = 5e-087
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +2 / +3
Query: 125 EKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 304
+ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 12 DSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 191
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 484
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 192 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 371
Query: 485 TIMPKDIQLARRIRGERA* 541
TIMPKDIQLARRIRGERA*
Sbjct: 372 TIMPKDIQLARRIRGERA* 428
Score = 207 bits (447), Expect = 1e-054
Identities = 98/138 (71%), Positives = 104/138 (75%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN +SVLKS*
Sbjct: 424 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS* 245
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC G
Sbjct: 244 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLG 65
Query: 177 ALPPVDLRAVCFVRAIFS 124
ALPPVDLRAVC VRA+ S
Sbjct: 64 ALPPVDLRAVCLVRAMES 11
Score = 83.1 bits (175), Expect(2) = 3e-025
Identities = 38/89 (42%), Positives = 61/89 (68%)
Frame = -3 / -2
Query: 541 LRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLEV 362
L A+A +L+V H+ L ++ ++GVL+Q+++V L FL+ ++ +ALE QIRLE+
Sbjct: 428 LSTFTANATSKLNVLRHNCHPLSMNCTQIGVLKQSNQVSLSCFLKCKNCMALESQIRLEI 249
Query: 361 LSDLTDQALEGQLPDQQLRALLVLADLAQ 275
LS+ TD+ L+ +L DQ+L LLVL DL +
Sbjct: 248 LSNFTDKTLKWKLADQKLGTLLVLTDLTK 162
Score = 48.7 bits (100), Expect(2) = 3e-025
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2 / -3
Query: 107 ISSLPASCLRGALPPVDLRAVCFVRAIFS 21
+++L ASC GALPPVDLRAVC VRA+ S
Sbjct: 97 LAALVASCFLGALPPVDLRAVCLVRAMES 11
>gb|U09465.1|MSU09465 Medicago sativa clone pH3c131 histone H3.2 mRNA, complete cds
Length = 617
Score = 315 bits (682), Expect = 5e-087
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +2 / +3
Query: 125 EKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 304
+ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 12 DSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 191
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 484
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 192 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 371
Query: 485 TIMPKDIQLARRIRGERA* 541
TIMPKDIQLARRIRGERA*
Sbjct: 372 TIMPKDIQLARRIRGERA* 428
Score = 207 bits (447), Expect = 1e-054
Identities = 98/138 (71%), Positives = 104/138 (75%)
Frame = -1 / -2
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN +SVLKS*
Sbjct: 424 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS* 245
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC G
Sbjct: 244 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLG 65
Query: 177 ALPPVDLRAVCFVRAIFS 124
ALPPVDLRAVC VRA+ S
Sbjct: 64 ALPPVDLRAVCLVRAMES 11
Score = 85.4 bits (180), Expect(2) = 6e-026
Identities = 39/89 (43%), Positives = 61/89 (68%)
Frame = -3 / -1
Query: 541 LRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLEV 362
L A+A +L+V H+ L ++ ++GVL+Q+++V L FL+ ++ +ALE QIRLE+
Sbjct: 428 LSTFTANATSKLNVLRHNCHPLSMNCTQIGVLKQSNQVSLSCFLKCKNCMALESQIRLEI 249
Query: 361 LSDLTDQALEGQLPDQQLRALLVLADLAQ 275
LSD TD+ L+ +L DQ+L LLVL DL +
Sbjct: 248 LSDFTDKTLKWKLADQKLGTLLVLTDLTK 162
Score = 48.7 bits (100), Expect(2) = 6e-026
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2 / -2
Query: 107 ISSLPASCLRGALPPVDLRAVCFVRAIFS 21
+++L ASC GALPPVDLRAVC VRA+ S
Sbjct: 97 LAALVASCFLGALPPVDLRAVCLVRAMES 11
>gb|CO516992.1|CO516992 s13dSG81F0300027_468530 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 496
Score = 313 bits (677), Expect = 2e-086
Identities = 135/137 (98%), Positives = 136/137 (99%)
Frame = +2 / +3
Query: 125 EKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 304
+ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 84 DSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 263
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 484
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 264 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 443
Query: 485 TIMPKDIQLARRIRGER 535
TIMPKDIQLARRIRGER
Sbjct: 444 TIMPKDIQLARRIRGER 494
Score = 207 bits (447), Expect = 1e-054
Identities = 98/138 (71%), Positives = 104/138 (75%)
Frame = -1 / -1
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN +SVLKS*
Sbjct: 496 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS* 317
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC G
Sbjct: 316 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLG 137
Query: 177 ALPPVDLRAVCFVRAIFS 124
ALPPVDLRAVC VRA+ S
Sbjct: 136 ALPPVDLRAVCLVRAMES 83
Score = 81.7 bits (172), Expect(2) = 6e-025
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = -3 / -3
Query: 526 ADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLEVLSDLT 347
A+A +L+V H+ L ++ ++GVL+Q+++V L FL+ ++ +ALE QIRLE+LS+ T
Sbjct: 485 ANATSKLNVLRHNCHPLSMNCTQIGVLKQSNQVSLSCFLKCKNCMALESQIRLEILSNFT 306
Query: 346 DQALEGQLPDQQLRALLVLADLAQ 275
D+ L+ +L DQ+L LLVL DL +
Sbjct: 305 DKTLKWKLADQKLGTLLVLTDLTK 234
Score = 48.7 bits (100), Expect(2) = 6e-025
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2 / -1
Query: 107 ISSLPASCLRGALPPVDLRAVCFVRAIFS 21
+++L ASC GALPPVDLRAVC VRA+ S
Sbjct: 169 LAALVASCFLGALPPVDLRAVCLVRAMES 83
>gb|CO515400.1|CO515400 s13dSG49H1000092_417859 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 591
Score = 309 bits (670), Expect = 2e-085
Identities = 135/138 (97%), Positives = 137/138 (99%)
Frame = +2 / +1
Query: 128 KMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 307
+MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST
Sbjct: 67 QMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 246
Query: 308 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 487
ELLIRKLP QRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT
Sbjct: 247 ELLIRKLPSQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 426
Query: 488 IMPKDIQLARRIRGERA* 541
IMPKDIQLA+RIRGERA*
Sbjct: 427 IMPKDIQLAKRIRGERA* 480
Score = 198 bits (426), Expect = 1e-051
Identities = 89/137 (64%), Positives = 98/137 (71%)
Frame = -1 / -2
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPR+ A+WMSLG++VTR AW+A +LVSSNRP LW RRSVLKS*
Sbjct: 476 ARSPRILFANWMSLGIIVTRLAWIAHKLVSSNRPTRYASAASCNASTA*LWKRRSVLKS* 297
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRT W+G+F I SSVLF Y ISR ATVPG GF TPPVVGAD AALVASC G
Sbjct: 296 AISRTNLWEGSFLIKSSVLF*YFLISRRATVPGR*RCGFLTPPVVGADLRAALVASCFLG 117
Query: 177 ALPPVDLRAVCFVRAIF 127
A PPVDLRAVC VRAI+
Sbjct: 116 AFPPVDLRAVCLVRAIW 66
Score = 93.2 bits (197), Expect(2) = 7e-028
Identities = 44/121 (36%), Positives = 69/121 (57%)
Frame = -3 / -1
Query: 616 RTNSIKLQIALLHPSAATGAGREIRLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQA 437
+T S + P T L AL D +LDV GH+ ++L +D A+V VL+Q
Sbjct: 555 KTKSFPITKHYRQPPI*TAPNTASSLSALTTDPLCQLDVLGHNSNSLGMDSAQVSVLKQT 376
Query: 436 DEVGLGGFLEGQDGVALEPQIRLEVLSDLTDQALEGQLPDQQLRALLVLADLAQRHRPGP 257
+++ L L+ + + LE ++ LEVLS+ T+Q L G+LPDQ+L LL+L +L + + G
Sbjct: 375 NKICLSSLLQCKHSMTLETKVSLEVLSNFTNQPLGGELPDQELSTLLILPNLTKSNSSGA 196
Query: 256 V 254
V
Sbjct: 195 V 193
Score = 47.3 bits (97), Expect(2) = 7e-028
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = -2 / -2
Query: 104 SSLPASCLRGALPPVDLRAVCFVRAIF 24
++L ASC GA PPVDLRAVC VRAI+
Sbjct: 146 AALVASCFLGAFPPVDLRAVCLVRAIW 66
>gb|U09459.1|MSU09459 Medicago sativa cultivar Chief histone H3.1 gene, 5' region and
complete cds
Length = 922
Score = 304 bits (659), Expect = 7e-084
Identities = 134/140 (95%), Positives = 136/140 (97%)
Frame = +2 / +1
Query: 131 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 310
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 295 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 474
Query: 311 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 490
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 475 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 654
Query: 491 MPKDIQLARRIRGERA*AYL 550
MPKDIQLARRIRGERA*+ L
Sbjct: 655 MPKDIQLARRIRGERA*SSL 714
Score = 205 bits (442), Expect = 6e-054
Identities = 97/144 (67%), Positives = 103/144 (71%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
A SP +R AS MSLGM+VT A +AQRLVSS RP LWN RSVLKS*
Sbjct: 701 ALSPLIRLAS*MSLGMIVTLLA*IAQRLVSSKRPTK*ASAAS*RAETALLWNLRSVLKS* 522
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRRW G+ R+ SSVLF YLRIS ATVPGL L GFFTPPV GADF AA VASC RG
Sbjct: 521 AISRTRRWNGSLRMRSSVLF*YLRISLKATVPGLNLCGFFTPPVAGADFRAAFVASCFRG 342
Query: 177 ALPPVDLRAVCFVRAIFSSPWLLD 106
ALPPVDLRAVC VRAI S W +D
Sbjct: 341 ALPPVDLRAVCLVRAIERSFWKID 270
Score = 81.3 bits (171), Expect(2) = 1e-026
Identities = 34/90 (37%), Positives = 61/90 (67%)
Frame = -3 / -2
Query: 544 RLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLE 365
R L++D++ +L+V HD ++L ++ ++ + ++ D+V FL+ ++ ALE QI LE
Sbjct: 708 RSSPLSSDSSCKLNVLRHDCNSLGMNCTKISIFKETDQVSFSRFLKSRNSTALESQICLE 529
Query: 364 VLSDLTDQALEGQLPDQQLRALLVLADLAQ 275
+LSD T++ LE + D++L ALL+L DL+Q
Sbjct: 528 ILSDFTNKTLEWKFTDEKLSALLILTDLSQ 439
Score = 56.1 bits (116), Expect(2) = 1e-026
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = -2 / -3
Query: 92 ASCLRGALPPVDLRAVCFVRAIFSSPWLLD 3
ASC RGALPPVDLRAVC VRAI S W +D
Sbjct: 359 ASCFRGALPPVDLRAVCLVRAIERSFWKID 270
>emb|X13673.1|MSHIS311 Medicago sativa H3 histone gene ALH3-1.1
Length = 1089
Score = 303 bits (657), Expect = 1e-083
Identities = 133/138 (96%), Positives = 135/138 (97%)
Frame = +2 / +3
Query: 131 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 310
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 285 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 464
Query: 311 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 490
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 465 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 644
Query: 491 MPKDIQLARRIRGERA*A 544
MPKDIQLARRIRGERA*+
Sbjct: 645 MPKDIQLARRIRGERA*S 698
Score = 219 bits (473), Expect = 3e-058
Identities = 98/136 (72%), Positives = 103/136 (75%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPR+R ASW+SLGM+VTR A MAQRLVSS RP LW RRSVLKS*
Sbjct: 691 ARSPRIRLASWISLGMIVTRLA*MAQRLVSSKRPTR*ASAASCKADTAELWKRRSVLKS* 512
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRRWKG+ R+ SSVLFWYLRISR ATVPGL GFFTPPV GAD AA VASC G
Sbjct: 511 AISRTRRWKGSLRMRSSVLFWYLRISRRATVPGLKR*GFFTPPVAGADLRAAFVASCFLG 332
Query: 177 ALPPVDLRAVCFVRAI 130
ALPPVDLRAVC VRAI
Sbjct: 331 ALPPVDLRAVCLVRAI 284
Score = 116 bits (247), Expect(2) = 3e-034
Identities = 50/99 (50%), Positives = 66/99 (66%)
Frame = -3 / -2
Query: 544 RLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLE 365
R LA D ELD+ HD D L ++GAEV +L++ DE+ LG FL+ + G ALE +I LE
Sbjct: 698 RSSTLATDTPSELDILRHDSDTLSMNGAEVSILKETDEISLGRFLQSRHGGALETEISLE 519
Query: 364 VLSDLTDQALEGQLPDQQLRALLVLADLAQRHRPGPVPV 248
+LSDLTD+ LEG+ D++L ALLVLADL + P V
Sbjct: 518 ILSDLTDKTLEGEFADEELSALLVLADLTESDGSWPETV 402
Score = 91.3 bits (193), Expect(2) = 6e-023
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +1 / +2
Query: 130 DGSYEADRPQVHRRQGPAQAARHQGGEEVGADDRRREEAPQVQARDGGAARDPQVPEEHG 309
+G+Y+A+R Q+HR Q +A RH+ ++ + RR EE QAR+ + DPQVPEEH
Sbjct: 284 NGTYQANRSQIHRWQSSKEATRHKSRSQICSGHRRSEETSPFQARNRRSP*DPQVPEEH* 463
Query: 310 AADPEVALPAPGP*DRSGLQD 372
A P+ LPA P*DRSG QD
Sbjct: 464 APHPQTPLPASCP*DRSGFQD 526
Score = 46.9 bits (96), Expect(2) = 3e-034
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -2 / -3
Query: 92 ASCLRGALPPVDLRAVCFVRAI 27
ASC GALPPVDLRAVC VRAI
Sbjct: 349 ASCFLGALPPVDLRAVCLVRAI 284
Score = 30.4 bits (60), Expect(2) = 6e-023
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +3 / +1
Query: 348 VRSLRTSRRICGSRATPSWPSRKPPRPTSS 437
VRSLR SR I SRA P +K PR SS
Sbjct: 502 VRSLRISRLISVSRAPPCRLCKKRPRLISS 591
>emb|X13674.1|MSHIS3C1 Medicago sativa mRNA for histone H3 clone pH3c-1
Length = 618
Score = 303 bits (657), Expect = 1e-083
Identities = 133/138 (96%), Positives = 135/138 (97%)
Frame = +2 / +1
Query: 131 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 310
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 64 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 243
Query: 311 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 490
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 244 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 423
Query: 491 MPKDIQLARRIRGERA*A 544
MPKDIQLARRIRGERA*+
Sbjct: 424 MPKDIQLARRIRGERA*S 477
Score = 220 bits (474), Expect = 2e-058
Identities = 98/136 (72%), Positives = 103/136 (75%)
Frame = -1 / -2
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPR+R ASW+SLGM+VTR A MAQRLVSS RP LW RRSVLKS*
Sbjct: 470 ARSPRIRLASWISLGMIVTRLA*MAQRLVSSKRPTR*ASAASCSADTAELWKRRSVLKS* 291
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRRWKG+ R+ SSVLFWYLRISR ATVPGL GFFTPPV GAD AA VASC G
Sbjct: 290 AISRTRRWKGSLRMRSSVLFWYLRISRRATVPGLKR*GFFTPPVAGADLRAAFVASCFLG 111
Query: 177 ALPPVDLRAVCFVRAI 130
ALPPVDLRAVC VRAI
Sbjct: 110 ALPPVDLRAVCLVRAI 63
Score = 117 bits (251), Expect(2) = 5e-035
Identities = 50/99 (50%), Positives = 67/99 (67%)
Frame = -3 / -1
Query: 544 RLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLE 365
R LA D ELD+ GHD D L ++GAE+ +L++ DE+ LG FL+ + G ALE +I LE
Sbjct: 477 RSSTLATDTPSELDILGHDSDTLSMNGAEISILKETDEISLGRFLQCRHGGALETEISLE 298
Query: 364 VLSDLTDQALEGQLPDQQLRALLVLADLAQRHRPGPVPV 248
+LSDLTD+ LEG+ D++L ALLVLADL + P V
Sbjct: 297 ILSDLTDKTLEGEFADEELSALLVLADLTESDGSWPETV 181
Score = 91.3 bits (193), Expect(2) = 5e-023
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +1 / +3
Query: 130 DGSYEADRPQVHRRQGPAQAARHQGGEEVGADDRRREEAPQVQARDGGAARDPQVPEEHG 309
+G+Y+A+R Q+HR Q +A RH+ ++ + RR EE QAR+ + DPQVPEEH
Sbjct: 63 NGTYQANRSQIHRWQSSKEATRHKSRSQICSGHRRSEETSPFQARNRRSP*DPQVPEEH* 242
Query: 310 AADPEVALPAPGP*DRSGLQD 372
A P+ LPA P*DRSG QD
Sbjct: 243 APHPQTPLPASCP*DRSGFQD 305
Score = 46.9 bits (96), Expect(2) = 5e-035
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -2 / -2
Query: 92 ASCLRGALPPVDLRAVCFVRAI 27
ASC GALPPVDLRAVC VRAI
Sbjct: 128 ASCFLGALPPVDLRAVCLVRAI 63
Score = 30.9 bits (61), Expect(2) = 5e-023
Identities = 17/30 (56%), Positives = 18/30 (60%)
Frame = +3 / +2
Query: 348 VRSLRTSRRICGSRATPSWPSRKPPRPTSS 437
VRSLR SR I SRA P +K PR SS
Sbjct: 281 VRSLRISRLISVSRAPPCRHCKKRPRLISS 370
>gb|CO514105.1|CO514105 s13dSG75D0200014_156872 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 599
Score = 303 bits (656), Expect = 2e-083
Identities = 133/137 (97%), Positives = 134/137 (97%)
Frame = +2 / +2
Query: 131 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 310
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 74 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 253
Query: 311 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 490
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 254 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 433
Query: 491 MPKDIQLARRIRGERA* 541
MPKDIQLARRIRGERA*
Sbjct: 434 MPKDIQLARRIRGERA* 484
Score = 195 bits (421), Expect = 5e-051
Identities = 94/149 (63%), Positives = 101/149 (67%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
A SP + AS MSLGM+VT A +AQR VSS P LWN RSVLKS*
Sbjct: 480 ALSPLILLAS*MSLGMIVTLLA*IAQRFVSSKSPTK*ASAAS*RAETALLWNLRSVLKS* 301
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRRW G+ R+ SSVLF YLRIS ATVPGL L GFFTPPV GADF AA VASC RG
Sbjct: 300 AISRTRRWNGSLRMRSSVLF*YLRISLKATVPGLNLCGFFTPPVAGADFRAAFVASCFRG 121
Query: 177 ALPPVDLRAVCFVRAIFSSPWLLDFFLAC 91
ALPPVDLRAVC VRAI +D+ L C
Sbjct: 120 ALPPVDLRAVCLVRAIVRRFLKIDY*LCC 34
Score = 83.1 bits (175), Expect(2) = 1e-025
Identities = 35/92 (38%), Positives = 66/92 (71%)
Frame = -3 / -2
Query: 550 EIRLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIR 371
+++L LA+D++ +L+V GHD ++L ++ +V V +++++V FL+ ++ ALE +I
Sbjct: 493 KLKLSPLASDSSCKLNVLGHDCNSLSMNCTKVCVFKESNQVSFSCFLKSRNSTALESKIC 314
Query: 370 LEVLSDLTDQALEGQLPDQQLRALLVLADLAQ 275
LE+LSD T++ LE + D++L ALL+L +L+Q
Sbjct: 313 LEILSDFTNKTLEWKFTDEKLSALLILTNLSQ 218
Score = 50.1 bits (103), Expect(2) = 1e-025
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2 / -3
Query: 92 ASCLRGALPPVDLRAVCFVRAI 27
ASC RGALPPVDLRAVC VRAI
Sbjct: 138 ASCFRGALPPVDLRAVCLVRAI 73
>gb|CO514111.1|CO514111 s13dSG75D0800062_156884 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 511
Score = 303 bits (656), Expect = 2e-083
Identities = 130/141 (92%), Positives = 135/141 (95%)
Frame = +2 / +1
Query: 125 EKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 304
+ MARTKQTAR+ST GKAPRKQLATKAARKS PTTGG+KKPHRYRPGTVALREIRKYQKS
Sbjct: 43 DSMARTKQTARRSTLGKAPRKQLATKAARKSVPTTGGIKKPHRYRPGTVALREIRKYQKS 222
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 484
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEA EAYLVGLFEDTNLCAIHAKR+
Sbjct: 223 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAVEAYLVGLFEDTNLCAIHAKRI 402
Query: 485 TIMPKDIQLARRIRGERA*AY 547
T+M KDIQLARRIRGERA* Y
Sbjct: 403 TVMVKDIQLARRIRGERA*GY 465
Score = 182 bits (391), Expect = 7e-047
Identities = 89/138 (64%), Positives = 97/138 (70%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPR+RRAS +SL + V A +A +LVSSN+P WLWN +SVLKS*
Sbjct: 455 ARSPRIRRAS*ISLTITVILLA*IAHKLVSSNKPTK*ASTAS*SARTAWLWNLKSVLKS* 276
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRRW G+ RI SSVLF YLRISR ATVPG GF PPVVG DF AA VASC G
Sbjct: 275 AISRTRRWNGSLRIKSSVLF*YLRISRRATVPGR*R*GFLIPPVVGTDFRAAFVASCFLG 96
Query: 177 ALPPVDLRAVCFVRAIFS 124
ALP VDLRAVCFVRAI S
Sbjct: 95 ALPRVDLRAVCFVRAIES 42
Score = 73.9 bits (155), Expect(2) = 8e-022
Identities = 32/91 (35%), Positives = 56/91 (61%)
Frame = -3 / -2
Query: 547 IRLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRL 368
I L D A +L++ H+GD L ++ ++G+L+Q + + FL+ ++ +ALE QI L
Sbjct: 465 ITLSTFTTDTASKLNILNHNGDPLSMNCTQIGILKQTN*ISFHCFLKCENCMALESQICL 286
Query: 367 EVLSDLTDQALEGQLPDQQLRALLVLADLAQ 275
E+LS+ T++ LE + DQ+ LL+L L +
Sbjct: 285 EILSNFTNKTLEWKFTDQKFGTLLILTYLTK 193
Score = 46.0 bits (94), Expect(2) = 8e-022
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -2 / -3
Query: 92 ASCLRGALPPVDLRAVCFVRAIFS 21
ASC GALP VDLRAVCFVRAI S
Sbjct: 113 ASCFLGALPRVDLRAVCFVRAIES 42
>gb|CO516875.1|CO516875 s13dSG98H1100094_447078 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 565
Score = 303 bits (656), Expect = 2e-083
Identities = 133/137 (97%), Positives = 134/137 (97%)
Frame = +2 / +3
Query: 131 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 310
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 69 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 248
Query: 311 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 490
LLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 249 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 428
Query: 491 MPKDIQLARRIRGERA* 541
MPKDIQLARRIRGERA*
Sbjct: 429 MPKDIQLARRIRGERA* 479
Score = 195 bits (421), Expect = 5e-051
Identities = 94/149 (63%), Positives = 101/149 (67%)
Frame = -1 / -1
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
A SP + AS MSLGM+VT A +AQR VSS P LWN RSVLKS*
Sbjct: 475 ALSPLILLAS*MSLGMIVTLLA*IAQRFVSSKSPTK*ASAAS*RAETALLWNLRSVLKS* 296
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRRW G+ R+ SSVLF YLRIS ATVPGL L GFFTPPV GADF AA VASC RG
Sbjct: 295 AISRTRRWNGSLRMRSSVLF*YLRISLKATVPGLNLCGFFTPPVAGADFRAAFVASCFRG 116
Query: 177 ALPPVDLRAVCFVRAIFSSPWLLDFFLAC 91
ALPPVDLRAVC VRAI +D+ L C
Sbjct: 115 ALPPVDLRAVCLVRAIVRRFLKIDY*LCC 29
Score = 83.1 bits (175), Expect(2) = 1e-025
Identities = 35/92 (38%), Positives = 66/92 (71%)
Frame = -3 / -3
Query: 550 EIRLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIR 371
+++L LA+D++ +L+V GHD ++L ++ +V V +++++V FL+ ++ ALE +I
Sbjct: 488 KLKLSPLASDSSCKLNVLGHDCNSLSMNCTKVCVFKESNQVSFSCFLKSRNSTALESKIC 309
Query: 370 LEVLSDLTDQALEGQLPDQQLRALLVLADLAQ 275
LE+LSD T++ LE + D++L ALL+L +L+Q
Sbjct: 308 LEILSDFTNKTLEWKFTDEKLSALLILTNLSQ 213
Score = 50.1 bits (103), Expect(2) = 1e-025
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2 / -1
Query: 92 ASCLRGALPPVDLRAVCFVRAI 27
ASC RGALPPVDLRAVC VRAI
Sbjct: 133 ASCFRGALPPVDLRAVCLVRAI 68
>gb|M35867.1|ALFHISH3A Alfalfa histone H3 (H3-1.1) gene, complete cds
Length = 1089
Score = 302 bits (653), Expect = 5e-083
Identities = 132/138 (95%), Positives = 134/138 (97%)
Frame = +2 / +3
Query: 131 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 310
MARTKQTARKSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTE
Sbjct: 285 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 464
Query: 311 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 490
LLIRKLPFQRLVREIAQDFKTDLRFQS V ALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 465 LLIRKLPFQRLVREIAQDFKTDLRFQSSVVSALQEAAEAYLVGLFEDTNLCAIHAKRVTI 644
Query: 491 MPKDIQLARRIRGERA*A 544
MPKDIQLARRIRGERA*+
Sbjct: 645 MPKDIQLARRIRGERA*S 698
Score = 219 bits (473), Expect = 3e-058
Identities = 98/136 (72%), Positives = 103/136 (75%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPR+R ASW+SLGM+VTR A MAQRLVSS RP LW RRSVLKS*
Sbjct: 691 ARSPRIRLASWISLGMIVTRLA*MAQRLVSSKRPTR*ASAASCKADTTELWKRRSVLKS* 512
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRRWKG+ R+ SSVLFWYLRISR ATVPGL GFFTPPV GAD AA VASC G
Sbjct: 511 AISRTRRWKGSLRMRSSVLFWYLRISRRATVPGLKR*GFFTPPVAGADLRAAFVASCFLG 332
Query: 177 ALPPVDLRAVCFVRAI 130
ALPPVDLRAVC VRAI
Sbjct: 331 ALPPVDLRAVCLVRAI 284
Score = 112 bits (240), Expect(2) = 3e-033
Identities = 49/99 (49%), Positives = 65/99 (65%)
Frame = -3 / -2
Query: 544 RLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLE 365
R LA D ELD+ HD D L ++GAEV +L++ DE+ LG FL+ + ALE +I LE
Sbjct: 698 RSSTLATDTPSELDILRHDSDTLSMNGAEVSILKETDEISLGRFLQSRHDGALETEISLE 519
Query: 364 VLSDLTDQALEGQLPDQQLRALLVLADLAQRHRPGPVPV 248
+LSDLTD+ LEG+ D++L ALLVLADL + P V
Sbjct: 518 ILSDLTDKTLEGEFADEELSALLVLADLTESDGSWPETV 402
Score = 91.3 bits (193), Expect(2) = 8e-022
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +1 / +2
Query: 130 DGSYEADRPQVHRRQGPAQAARHQGGEEVGADDRRREEAPQVQARDGGAARDPQVPEEHG 309
+G+Y+A+R Q+HR Q +A RH+ ++ + RR EE QAR+ + DPQVPEEH
Sbjct: 284 NGTYQANRSQIHRWQSSKEATRHKSRSQICSGHRRSEETSPFQARNRRSP*DPQVPEEH* 463
Query: 310 AADPEVALPAPGP*DRSGLQD 372
A P+ LPA P*DRSG QD
Sbjct: 464 APHPQTPLPASCP*DRSGFQD 526
Score = 46.9 bits (96), Expect(2) = 3e-033
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -2 / -3
Query: 92 ASCLRGALPPVDLRAVCFVRAI 27
ASC GALPPVDLRAVC VRAI
Sbjct: 349 ASCFLGALPPVDLRAVCLVRAI 284
Score = 26.7 bits (52), Expect(2) = 8e-022
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3 / +1
Query: 348 VRSLRTSRRICGSRATPSWPSRKPPRPTSS 437
VRSLR SR I SRA +K PR SS
Sbjct: 502 VRSLRISRLISVSRAPSCRLCKKRPRLISS 591
>gb|CO516855.1|CO516855 s13dSG98E1100085_447038 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 469
Score = 301 bits (651), Expect = 9e-083
Identities = 130/134 (97%), Positives = 132/134 (98%)
Frame = +2 / +1
Query: 125 EKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 304
+ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 67 DSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 246
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 484
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA+RV
Sbjct: 247 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAERV 426
Query: 485 TIMPKDIQLARRIR 526
TI PKDIQLARRIR
Sbjct: 427 TITPKDIQLARRIR 468
Score = 199 bits (428), Expect = 5e-052
Identities = 95/134 (70%), Positives = 100/134 (74%)
Frame = -1 / -3
Query: 525 RMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS*AISR 346
RMRRAS MSLG++VT A +A RLVSSN P WLWN RSVLKS*AISR
Sbjct: 467 RMRRAS*MSLGVIVTLSA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLRSVLKS*AISR 288
Query: 345 TRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRGALPP 166
TRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC GALPP
Sbjct: 287 TRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLGALPP 108
Query: 165 VDLRAVCFVRAIFS 124
VDLRAVC VRA+ S
Sbjct: 107 VDLRAVCLVRAMES 66
Score = 78.0 bits (164), Expect(2) = 7e-024
Identities = 36/84 (42%), Positives = 59/84 (70%)
Frame = -3 / -2
Query: 526 ADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLEVLSDLT 347
A+A +L+V + L ++ ++GVL+Q+++V L FL+ ++ +ALE QIRLE+LS+ T
Sbjct: 468 ANATSKLNVLRRNCHPLSMNCTQIGVLKQSNQVSLSCFLKCKNCMALESQIRLEILSNFT 289
Query: 346 DQALEGQLPDQQLRALLVLADLAQ 275
D+ L+ +L DQ+L LLVL DL +
Sbjct: 288 DKTLKWKLADQKLGTLLVLTDLTK 217
Score = 48.7 bits (100), Expect(2) = 7e-024
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -2 / -3
Query: 107 ISSLPASCLRGALPPVDLRAVCFVRAIFS 21
+++L ASC GALPPVDLRAVC VRA+ S
Sbjct: 152 LAALVASCFLGALPPVDLRAVCLVRAMES 66
>gb|U09462.1|MSU09462 Medicago sativa clone pH3c126 histone H3.2 mRNA, partial cds
Length = 571
Score = 294 bits (637), Expect = 8e-081
Identities = 128/128 (100%), Positives = 128/128 (100%)
Frame = +2 / +1
Query: 158 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQ 337
KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQ
Sbjct: 1 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQ 180
Query: 338 RLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 517
RLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR
Sbjct: 181 RLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLAR 360
Query: 518 RIRGERA* 541
RIRGERA*
Sbjct: 361 RIRGERA* 384
Score = 188 bits (406), Expect = 6e-049
Identities = 89/126 (70%), Positives = 94/126 (74%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN +SVLKS*
Sbjct: 380 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS* 201
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC G
Sbjct: 200 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLG 21
Query: 177 ALPPVD 160
ALPPVD
Sbjct: 20 ALPPVD 3
>gb|U09463.1|MSU09463 Medicago sativa Regen S clone pH3c127 histone H3.2 mRNA, partial
cds
Length = 595
Score = 288 bits (623), Expect = 7e-079
Identities = 125/125 (100%), Positives = 125/125 (100%)
Frame = +2 / +1
Query: 167 GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLV 346
GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLV
Sbjct: 1 GGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLV 180
Query: 347 REIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 526
REIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR
Sbjct: 181 REIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 360
Query: 527 GERA* 541
GERA*
Sbjct: 361 GERA* 375
Score = 181 bits (389), Expect = 1e-046
Identities = 86/123 (69%), Positives = 91/123 (73%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN +SVLKS*
Sbjct: 371 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLKSVLKS* 192
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC G
Sbjct: 191 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASCFLG 12
Query: 177 ALP 169
ALP
Sbjct: 11 ALP 3
>emb|X13676.1|MSHIS3C3 Medicago sativa mRNA for histone H3 clone pH3c-11
Length = 579
Score = 275 bits (595), Expect = 5e-075
Identities = 120/120 (100%), Positives = 120/120 (100%)
Frame = +2 / +3
Query: 182 RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 361
RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ
Sbjct: 3 RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 182
Query: 362 DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 541
DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
Sbjct: 183 DFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 362
Score = 173 bits (373), Expect = 2e-044
Identities = 83/117 (70%), Positives = 87/117 (74%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN RSVLKS*
Sbjct: 358 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLRSVLKS* 179
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASC 187
AISRTRR G+ RI SSVLFWYLRISR ATVPG Y GF TPPVVGADFLAALVASC
Sbjct: 178 AISRTRR*NGSLRIKSSVLFWYLRISRRATVPGRYR*GFLTPPVVGADFLAALVASC 8
>emb|X13675.1|MSHIS3C2 Medicago sativa mRNA for histone H3 clone pH3c-3
Length = 513
Score = 275 bits (594), Expect = 7e-075
Identities = 120/125 (96%), Positives = 122/125 (97%)
Frame = +2 / +1
Query: 170 GKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVR 349
GKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVR
Sbjct: 1 GKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVR 180
Query: 350 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 529
EIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 181 EIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 360
Query: 530 ERA*A 544
ERA*+
Sbjct: 361 ERA*S 375
Score = 189 bits (407), Expect = 4e-049
Identities = 85/122 (69%), Positives = 90/122 (73%)
Frame = -1 / -2
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPR+R ASW+SLGM+VTR A MAQRLVSS RP LW RRSVLKS*
Sbjct: 368 ARSPRIRLASWISLGMIVTRLA*MAQRLVSSKRPTR*ASAASCSADTAELWKRRSVLKS* 189
Query: 357 AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRG 178
AISRTRRWKG+ R+ SSVLFWYLRISR ATVPGL GFFTPPV GAD AA VASC G
Sbjct: 188 AISRTRRWKGSLRMRSSVLFWYLRISRRATVPGLKR*GFFTPPVAGADLRAAFVASCFLG 9
Query: 177 AL 172
AL
Sbjct: 8 AL 3
Score = 113 bits (242), Expect = 2e-026
Identities = 50/99 (50%), Positives = 66/99 (66%)
Frame = -3 / -1
Query: 544 RLRALAADAAGELDVFGHDGDALCVDGAEVGVLEQADEVGLGGFLEGQDGVALEPQIRLE 365
R LA D ELD+ HD D L ++GAEV +L++ DE+ LG FL+ + G ALE +I LE
Sbjct: 375 RSSTLATDTPSELDILRHDSDTLGMNGAEVSILKETDEISLGRFLQCRHGGALETEISLE 196
Query: 364 VLSDLTDQALEGQLPDQQLRALLVLADLAQRHRPGPVPV 248
+LSDLTD+ LEG+ D++L ALLVLADL + P V
Sbjct: 195 ILSDLTDKTLEGEFADEELSALLVLADLTESDGSRPETV 79
>gb|CO516695.1|CO516695 s13dSG74C0500035_446718 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 434
Score = 266 bits (575), Expect = 3e-072
Identities = 114/116 (98%), Positives = 115/116 (99%)
Frame = +2 / +2
Query: 125 EKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 304
+ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 86 DSMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 265
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 472
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH
Sbjct: 266 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIH 433
Score = 169 bits (364), Expect = 4e-043
Identities = 81/115 (70%), Positives = 84/115 (73%)
Frame = -1 / -3
Query: 468 MAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS*AISRTRRWKGNFRISSSVLFWYL 289
+A +LVSSN P L N RSVLKS*AISRTRRW G+ RI SSVLF YL
Sbjct: 429 IAHKLVSSNNPTR*ASAAS*SARTA*L*NLRSVLKS*AISRTRRWNGSLRIKSSVLF*YL 250
Query: 288 RISRSATVPGLYLWGFFTPPVVGADFLAALVASCLRGALPPVDLRAVCFVRAIFS 124
RISR ATVPG GFFTPPVVGADFLAALVASC GALPPVDLRAVCFVRAI S
Sbjct: 249 RISRRATVPGR*RCGFFTPPVVGADFLAALVASCFLGALPPVDLRAVCFVRAIES 85
>gb|U09458.1|MSU09458 Medicago sativa cultivar Chief histone H3.2 gene, 5' region and
complete cds
Length = 1676
Score = 130 bits (279), Expect(4) = 1e-070
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = +2 / +2
Query: 371 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 541
TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
Sbjct: 1175 TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA* 1345
Score = 72.1 bits (151), Expect(4) = 1e-070
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +2 / +1
Query: 269 VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDL 379
V EIRKYQKSTELLIRKLPFQRLVREIAQDFK ++
Sbjct: 952 VIYSEIRKYQKSTELLIRKLPFQRLVREIAQDFKVNI 1062
Score = 65.7 bits (137), Expect(4) = 1e-070
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2 / +3
Query: 200 KAARKSAPTTGGVKKPHRYRPGTVALR 280
+AARKSAPTTGGVKKPHRYRPGTVALR
Sbjct: 666 QAARKSAPTTGGVKKPHRYRPGTVALR 746
Score = 62.9 bits (131), Expect(4) = 1e-038
Identities = 32/56 (57%), Positives = 35/56 (62%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSV 370
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN RSV
Sbjct: 1341 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLRSV 1174
Score = 57.9 bits (120), Expect(4) = 1e-070
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2 / +3
Query: 125 EKMARTKQTARKSTGGKAPRKQLATK 202
+ MARTKQTARKSTGGKAPRKQLATK
Sbjct: 477 DSMARTKQTARKSTGGKAPRKQLATK 554
Score = 55.6 bits (115), Expect(4) = 1e-038
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -1 / -1
Query: 369 LKS*AISRTRRWKGNFRISSSVLFWYLRIS 280
LKS*AISRTRR G+ RI SSVLFWYLRIS
Sbjct: 1052 LKS*AISRTRR*NGSLRIKSSVLFWYLRIS 963
Score = 50.1 bits (103), Expect(4) = 1e-038
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = -1 / -2
Query: 210 LAALVASCLRGALPPVDLRAVCFVRAIFS 124
+ LVASC GALPPVDLRAVC VRA+ S
Sbjct: 562 VVTLVASCFLGALPPVDLRAVCLVRAMES 476
Score = 49.6 bits (102), Expect(4) = 1e-038
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = -1 / -2
Query: 279 RSATVPGLYLWGFFTPPVVGADFLAA 202
R ATVPG Y GF TPPVVGADFLAA
Sbjct: 745 RRATVPGRYR*GFLTPPVVGADFLAA 668
>gb|CO513649.1|CO513649 s13dSG17C0300018_140080 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 368
Score = 231 bits (499), Expect = 9e-062
Identities = 100/101 (99%), Positives = 101/101 (100%)
Frame = +2 / +2
Query: 128 KMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 307
+MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST
Sbjct: 65 QMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKST 244
Query: 308 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY 430
ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY
Sbjct: 245 ELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY 367
Score = 145 bits (311), Expect = 7e-036
Identities = 66/88 (75%), Positives = 68/88 (77%)
Frame = -1 / -3
Query: 390 LWNRRSVLKS*AISRTRRWKGNFRISSSVLFWYLRISRSATVPGLYLWGFFTPPVVGADF 211
LW RRSVLKS*AISRT WKG+F I SSVLF Y ISR ATVPG GF TPPVVGAD
Sbjct: 327 LWKRRSVLKS*AISRTNLWKGSFLIKSSVLF*YFLISRRATVPGR*RCGFLTPPVVGADL 148
Query: 210 LAALVASCLRGALPPVDLRAVCFVRAIF 127
AALVASC GA PPVDLRAVC VRAI+
Sbjct: 147 RAALVASCFLGAFPPVDLRAVCLVRAIW 64
>gb|CO517274.1|CO517274 s13dSG32H0900080_486144 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 576
Score = 198 bits (426), Expect = 1e-051
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2 / -2
Query: 281 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 460
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL
Sbjct: 575 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNL 396
Query: 461 CAIHAKRVTIMPKDIQLARRIRGERA* 541
CAIHAKRVTIMPKDIQLARRIRGERA*
Sbjct: 395 CAIHAKRVTIMPKDIQLARRIRGERA* 315
Score = 115 bits (246), Expect = 7e-027
Identities = 57/86 (66%), Positives = 61/86 (70%)
Frame = -1 / +1
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPRMRRAS MSLG++VT A +A RLVSSN P WLWN RSVLKS*
Sbjct: 319 ARSPRMRRAS*MSLGIIVTLLA*IAHRLVSSNNPTR*ASAAS*SARTAWLWNLRSVLKS* 498
Query: 357 AISRTRRWKGNFRISSSVLFWYLRIS 280
AISRTRR G+ RI SSVLFWYLRIS
Sbjct: 499 AISRTRR*NGSLRIKSSVLFWYLRIS 576
>gb|CO513821.1|CO513821 s13dSG73A0700049_156304 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 488
Score = 174 bits (375), Expect = 1e-044
Identities = 76/77 (98%), Positives = 76/77 (98%)
Frame = +2 / +2
Query: 317 IRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 496
IRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP
Sbjct: 5 IRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMP 184
Query: 497 KDIQLARRIRGERA*AY 547
KDIQLARRIRGERA* Y
Sbjct: 185 KDIQLARRIRGERA*GY 235
>gb|AW698701.1|AW698701 R154 non-glandular-haired subtracted cDNA library Medicago sativa
cDNA, mRNA sequence
Length = 366
Score = 174 bits (374), Expect = 2e-044
Identities = 78/88 (88%), Positives = 81/88 (92%)
Frame = +2 / +2
Query: 290 KYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAI 469
+YQ STELLIRKLPFQRLVREIAQDFKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAI
Sbjct: 17 RYQGSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAI 196
Query: 470 HAKRVTIMPKDIQLARRIRGERA*AYLA 553
HAKRVTIMPKDIQLA I GERA* +L+
Sbjct: 197 HAKRVTIMPKDIQLAPTITGERA*IWLS 280
Score = 96.4 bits (204), Expect = 4e-021
Identities = 48/83 (57%), Positives = 54/83 (65%)
Frame = -1 / -1
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
A SP + AS +SLGM+VT A MAQRLVSSN+P LWNRRSVLKS*
Sbjct: 264 ALSPVIVGAS*ISLGMIVTLLA*MAQRLVSSNKPTR*ASAAS*RAETALLWNRRSVLKS* 85
Query: 357 AISRTRRWKGNFRISSSVLFWYL 289
AISRT W G+F + SSVL WYL
Sbjct: 84 AISRTSLWNGSFLMRSSVLPWYL 16
>gb|AW698444.1|AW698444 g394 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 406
Score = 171 bits (367), Expect = 1e-043
Identities = 75/78 (96%), Positives = 75/78 (96%)
Frame = +2 / +1
Query: 305 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 484
TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYL GL EDTNLCAIHAKRV
Sbjct: 1 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLAGLSEDTNLCAIHAKRV 180
Query: 485 TIMPKDIQLARRIRGERA 538
TIMPKDIQLA RIRGERA
Sbjct: 181 TIMPKDIQLAMRIRGERA 234
Score = 103 bits (220), Expect = 3e-023
Identities = 45/77 (58%), Positives = 53/77 (68%)
Frame = -1 / -3
Query: 537 ARSPRMRRASWMSLGMMVTRFAWMAQRLVSSNRPXXXXXXXXXXXXXXWLWNRRSVLKS* 358
ARSPR+ A+WMSLG++VTR AW+A +LVSS+RP LW RRSVLKS*
Sbjct: 233 ARSPRILIANWMSLGIIVTRLAWIAHKLVSSDRPARYASAASCNASTA*LWKRRSVLKS* 54
Query: 357 AISRTRRWKGNFRISSS 307
AISRT WKG+F I SS
Sbjct: 53 AISRTNLWKGSFLIKSS 3
>gb|AW698347.1|AW698347 G78 glandular-haired subtracted cDNA library Medicago sativa cDNA,
mRNA sequence
Length = 553
Score = 109 bits (232), Expect(2) = 4e-031
Identities = 49/62 (79%), Positives = 52/62 (83%)
Frame = +2 / +1
Query: 365 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*A 544
F+ + +V ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*
Sbjct: 181 FQNRSQISEQSVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*N 360
Query: 545 YL 550
L
Sbjct: 361 LL 366
Score = 40.0 bits (81), Expect(2) = 4e-031
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1 / +1
Query: 289 QVPEEHGAADPEVALPAPGP*DRSGLQDGSAV 384
QVPEEH A+D E ++P *DR+G Q+ S +
Sbjct: 106 QVPEEHRASDQETSIPTSCS*DRTGFQNRSQI 201
>emb|X13677.1|MSHIS3C4 Medicago sativa mRNA for histone H3 C-terminal clone pH3c-12
Length = 322
Score = 129 bits (276), Expect = 5e-031
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = +2 / +1
Query: 365 FKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*A 544
FKTDLRFQS AV ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*+
Sbjct: 1 FKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA*S 180
>gb|CO516848.1|CO516848 s13dSG98E0300019_447024 Glandular trichomes Medicago sativa cDNA,
mRNA sequence
Length = 166
Score = 121 bits (258), Expect = 2e-028
Identities = 53/53 (100%), Positives = 53/53 (100%)
Frame = +2 / +3
Query: 281 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG 439
EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG
Sbjct: 6 EIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVG 164
Database: MedicagoSativa_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:23 PM
Number of letters in database: 3,745,706
Number of sequences in database: 7669
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 6,041,198
Number of Sequences: 7669
Number of extensions: 73707
Number of successful extensions: 1009
Number of sequences better than 1.0e-020: 30
length of database: 1,248,568
effective HSP length: 42
effective length of database: 926,470
effective search space used: 217720450
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)