TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCG38e04.yg.2.1
(690 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ469639.1|BJ469639 BJ469639 K. Sato unpublished cDNA li... 411 e-114
gb|BJ473076.1|BJ473076 BJ473076 K. Sato unpublished cDNA li... 411 e-114
gb|BM374437.2|BM374437 EBpi03_SQ003_J24_R pistil, 4 DPA, no... 336 1e-091
gb|BF616755.1|BF616755 HVSMEc0012I18f Hordeum vulgare seedl... 331 3e-090
gb|AY177665.1| Hordeum vulgare subsp. vulgare putative call... 271 1e-073
gb|BG369637.1|BG369637 HVSMEi0025E14f Hordeum vulgare 20 DA... 274 3e-073
gb|BE215834.2|BE215834 HV_CEb0008J21f Hordeum vulgare seedl... 247 6e-065
gb|CA031522.1|CA031522 HX10D22r HX Hordeum vulgare subsp. v... 239 5e-064
gb|CA018258.1|CA018258 HV08B15r HV Hordeum vulgare subsp. v... 231 3e-060
gb|CA027060.1|CA027060 HZ57M12r HZ Hordeum vulgare subsp. v... 194 3e-049
gb|BF627189.2|BF627189 HVSMEb0004D01f Hordeum vulgare seedl... 175 3e-043
gb|AV932586.1|AV932586 AV932586 K. Sato unpublished cDNA li... 173 1e-042
gb|BU982241.1|BU982241 HA25P01r HA Hordeum vulgare subsp. v... 170 7e-042
gb|AV934137.1|AV934137 AV934137 K. Sato unpublished cDNA li... 168 3e-041
gb|BE559011.2|BE559011 HV_CEb0022E12f Hordeum vulgare seedl... 156 1e-039
gb|AV836635.1|AV836635 AV836635 K. Sato unpublished cDNA li... 155 2e-037
gb|BU971000.1|BU971000 HB16F02r BC Hordeum vulgare subsp. v... 142 2e-033
gb|BJ470174.1|BJ470174 BJ470174 K. Sato unpublished cDNA li... 116 1e-025
>gb|BJ469639.1|BJ469639 BJ469639 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal27j14 5', mRNA sequence
Length = 604
Score = 411 bits (892), Expect = e-114
Identities = 169/196 (86%), Positives = 177/196 (90%)
Frame = -2 / +1
Query: 602 AXASXSFVXXGFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTKTHYYGR 423
A AS SFV GFLMALPMMMEIGLERGFRTALSDF+LMQLQLASVFFTFSLGTKTHYYG+
Sbjct: 1 ALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGK 180
Query: 422 TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELMILLVVYEIFGQSYRGAIT 243
TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKG+ELMILL+V+EIFGQSYRGAI
Sbjct: 181 TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVFEIFGQSYRGAIA 360
Query: 242 YIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWISNRGGIGVAPXXXXXXX 63
YIFIT SMWFMV TWLFAPFLFNPSGFEWQKIVDDWTDW+KWISNRGGIGV+P
Sbjct: 361 YIFITFSMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVSPEKSWESW 540
Query: 62 XXXEQEPLRCSGKRGT 15
E EPL+ SGKRGT
Sbjct: 541 WEKEHEPLKYSGKRGT 588
Score = 353 bits (766), Expect = 4e-097
Identities = 154/197 (78%), Positives = 162/197 (82%)
Frame = +1 / -3
Query: 7 AREVPRFPEQRRGSCSFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRN 186
+R VPRFPE RGSCSFSHHDSQLFSG TPIPPRLLIHL QSVQSSTIFCHSNPEGLNRN
Sbjct: 596 SRTVPRFPEYFRGSCSFSHHDSQLFSGETPIPPRLLIHLFQSVQSSTIFCHSNPEGLNRN 417
Query: 187 GAKSQVPTMNHMDTVMKM*VIAPLYD*PNXXXXXXXXXXXXPLTKWLRE*SR*FSANLAW 366
GAKSQV TMNHM+ VMKM +AP YD P PLTKWLRE SR*FSANLAW
Sbjct: 416 GAKSQVTTMNHMEKVMKMYAMAPRYDCPKISNTISKIINSMPLTKWLREYSR*FSANLAW 237
Query: 367 NTTNPRPVALYSAPPWSNVLP***VFVPNENVKKTEAN*SCISIKSLNAVLNPLSKPISI 546
NTTNPRPVALYSAPP S+V P***V VP ENVKKT+AN*SCIS KSLNAVLNPLS+PISI
Sbjct: 236 NTTNPRPVALYSAPPCSSVFP***VLVPRENVKKTDAN*SCISTKSLNAVLNPLSRPISI 57
Query: 547 IMGSAIKNPXXTKDXDA 597
I+GSAIK P T D +A
Sbjct: 56 IIGSAIKKPSCTNDCEA 6
Score = 253 bits (546), Expect = 1e-066
Identities = 108/193 (55%), Positives = 136/193 (70%)
Frame = -1 / +3
Query: 600 SCVXVFCAXWIFDGAAHDDGNRFGERIQNCIE*FYTDAASVGLCFLHILVGNKNSLLRKD 421
SC+ V CA W+ DG +DDG+ GER+Q+ IE DAASV + LHIL N++SLLRKD
Sbjct: 3 SCLTVVCAAWLLDGTPYDDGDWSGERVQDRIERLCADAASVSIRLLHILPRNQDSLLRKD 182
Query: 420 VTPWRSGIQSHWTWVCGVPCQIC*ELSTLFPQPFCQGP*ADDSTSCV*NIWSVI*RGYNL 241
WRS + S+WTW+ GVPCQ+ ELS + +PF QG DD V*++ +V+ R + +
Sbjct: 183 AATWRS*V*SYWTWIRGVPCQVRRELSAVLAEPFRQGHRVDDLAYRV*DLRAVVPRSHRV 362
Query: 240 HLHHRIHVVHGGHLALCTIPVQSFWI*VAEDCG*LD*LAQVDQQSWRYWCGTREKLGVMV 61
HLH+ +HVVHG +LALC +PVQ FW+ VAEDCG*LD*L QVDQQ Y C EKLGVMV
Sbjct: 363 HLHNLLHVVHGRYLALCAVPVQPFWVRVAEDCG*LD*LEQVDQQPRGYRCFAGEKLGVMV 542
Query: 60 GKRAGAPSLLWEA 22
G+RA AP +L EA
Sbjct: 543 GERARAPEILREA 581
Score = 212 bits (458), Expect = 1e-054
Identities = 95/171 (55%), Positives = 119/171 (69%)
Frame = +3 / -2
Query: 90 HTNTSTIADPLVPISPVIHNLLPLKSRRIEQEWCKEPSAHHEPHGYGDEDVSYSPSI*LT 269
+T+T +ADPLVP+SPVIHNLLPL+ RR+EQE KEP HEPHG G EDV S+ L
Sbjct: 513 NTDTPAVADPLVPVSPVIHNLLPLEPRRVEQERRKEPGNDHEPHGEGYEDVRDGSSVRLP 334
Query: 270 KYFIHN**NHQLKALDKMAAGIKSIVLSKFGMEHHKPTSSGSVFRSSME*RPSVVVSFCS 449
+ H+ +HQL ALD+MA ++ IVL + GMEHH+ TSS S+ SSM R SVVVS S
Sbjct: 333 EDLKHDKQDHQLDALDEMAPRVQPIVLGELGMEHHESTSSSSILSSSM*QRLSVVVSLGS 154
Query: 450 QRECEENRGQLKLHQYKITQCSSESSLQTDFHHHGQRHQKSXXHKRX*RXS 602
+ ECEE+ LKLHQ+K+ QC E SLQT+ HHH + HQ++ HKR * S
Sbjct: 153 EGECEEDGC*LKLHQHKVAQCGPEPSLQTNLHHHRECHQEAKLHKRL*GKS 1
Score = 205 bits (443), Expect = 2e-052
Identities = 104/196 (53%), Positives = 127/196 (64%)
Frame = +2 / -1
Query: 14 RYRASQSNEGAPALFPTMTPSFSLVPHQYLHDC*STCANQSSHPQSSATQIQKD*TGMVQ 193
R AS+S GA AL PTMTP+FS H+Y C*STC++QSSHPQSSAT+ QK *TG Q
Sbjct: 589 RCHASRSISGARALSPTMTPNFSPAKHRYPRGC*STCSSQSSHPQSSATRTQKG*TGTAQ 410
Query: 194 RAKCPP*TTWIR**RCKL*PLYMTDQIFHTQLVESSAQGP*QNGCGNKVDSSQQIWHGTP 373
RA+ P*TTW R *RC L T + T+ SS + P*+NG + DSS++ WHGTP
Sbjct: 409 RAR*RP*TTWRRL*RCTRWLLGTTARRSQTR*ARSSTRCP*RNGSASTADSSRRTWHGTP 230
Query: 374 QTHVQWLCIPLLHGVTSFRSSEFLFPTRM*RKQRPTEAASV*NHSMQF*ILSPNRFPSSW 553
+ HVQ L LLH SFRSSE F RM*R++ TEAAS + SM+ * LSP++ PSS
Sbjct: 229 RIHVQ*LYTQLLHVAASFRSSESWFRGRM*RRRMLTEAASAQSRSMRS*TLSPDQSPSS* 50
Query: 554 AAPSKIXXAQKTLTXE 601
PS+ AQ T+ E
Sbjct: 49 GVPSRSQAAQTTVRQE 2
Score = 202 bits (436), Expect = 1e-051
Identities = 106/190 (55%), Positives = 115/190 (60%)
Frame = -3 / +2
Query: 583 LCXXDF*WRCP**WKSVWREDSELH*VILY*CSFSWPLFSSHSRWEQKLTTTEGRYSMEE 404
LC *W **W+ VWRE S H* L *CSFS SSHS E +LTTTE R MEE
Sbjct: 20 LCSLAS*WHSL**WRLVWREGSGPH*ATLC*CSFS*HPSSSHSPSEPRLTTTERRCYMEE 199
Query: 403 RNTEPLDVGLWCSMPNLLRTIDFIPAAILSRALS**FY*LCMKYLVSHIEGL*LTSSSPY 224
+ E LDV WCSMP+ RTI AI SRA S** C++ S E TSS P
Sbjct: 200 LSIELLDVDSWCSMPSSPRTIGCTRGAISSRASS**SCLSCLRSSGSRTEEPSRTSS*PS 379
Query: 223 PCGSWWALGSLHHSCSILLDLSGRRLWMTGLIGTSGSAIVEVLVWHQRKAGSHGGKKSRS 44
PCGSW GSL SCS LL SGRRLWMTGL GTSGSA V V+ +RK GSHGG+KS S
Sbjct: 380 PCGSWSLPGSLRRSCSTLLGSSGRRLWMTGLTGTSGSATAGVSVFRRRKVGSHGGRKSTS 559
Query: 43 PFVALGSAVP 14
P GS P
Sbjct: 560 P*NTPGSVAP 589
>gb|BJ473076.1|BJ473076 BJ473076 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40n15 5', mRNA sequence
Length = 614
Score = 411 bits (892), Expect = e-114
Identities = 169/196 (86%), Positives = 177/196 (90%)
Frame = -2 / +3
Query: 602 AXASXSFVXXGFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTKTHYYGR 423
A AS SFV GFLMALPMMMEIGLERGFRTALSDF+LMQLQLASVFFTFSLGTKTHYYG+
Sbjct: 12 ALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGK 191
Query: 422 TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELMILLVVYEIFGQSYRGAIT 243
TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKG+ELMILL+V+EIFGQSYRGAI
Sbjct: 192 TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGIELMILLIVFEIFGQSYRGAIA 371
Query: 242 YIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWISNRGGIGVAPXXXXXXX 63
YIFIT SMWFMV TWLFAPFLFNPSGFEWQKIVDDWTDW+KWISNRGGIGV+P
Sbjct: 372 YIFITFSMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVSPEKSWESW 551
Query: 62 XXXEQEPLRCSGKRGT 15
E EPL+ SGKRGT
Sbjct: 552 WEKEHEPLKYSGKRGT 599
Score = 355 bits (769), Expect = 2e-097
Identities = 155/199 (77%), Positives = 163/199 (81%)
Frame = +1 / -2
Query: 7 AREVPRFPEQRRGSCSFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRN 186
+R VPRFPE RGSCSFSHHDSQLFSG TPIPPRLLIHL QSVQSSTIFCHSNPEGLNRN
Sbjct: 607 SRTVPRFPEYFRGSCSFSHHDSQLFSGETPIPPRLLIHLFQSVQSSTIFCHSNPEGLNRN 428
Query: 187 GAKSQVPTMNHMDTVMKM*VIAPLYD*PNXXXXXXXXXXXXPLTKWLRE*SR*FSANLAW 366
GAKSQV TMNHM+ VMKM +AP YD P PLTKWLRE SR*FSANLAW
Sbjct: 427 GAKSQVTTMNHMEKVMKMYAMAPRYDCPKISNTISKIINSMPLTKWLREYSR*FSANLAW 248
Query: 367 NTTNPRPVALYSAPPWSNVLP***VFVPNENVKKTEAN*SCISIKSLNAVLNPLSKPISI 546
NTTNPRPVALYSAPP S+V P***V VP ENVKKT+AN*SCIS KSLNAVLNPLS+PISI
Sbjct: 247 NTTNPRPVALYSAPPCSSVFP***VLVPRENVKKTDAN*SCISTKSLNAVLNPLSRPISI 68
Query: 547 IMGSAIKNPXXTKDXDAXA 603
I+GSAIK P T D +A A
Sbjct: 67 IIGSAIKKPSCTNDCEARA 11
Score = 253 bits (546), Expect = 1e-066
Identities = 108/193 (55%), Positives = 136/193 (70%)
Frame = -1 / +2
Query: 600 SCVXVFCAXWIFDGAAHDDGNRFGERIQNCIE*FYTDAASVGLCFLHILVGNKNSLLRKD 421
SC+ V CA W+ DG +DDG+ GER+Q+ IE DAASV + LHIL N++SLLRKD
Sbjct: 14 SCLTVVCAAWLLDGTPYDDGDWSGERVQDRIERLCADAASVSIRLLHILPRNQDSLLRKD 193
Query: 420 VTPWRSGIQSHWTWVCGVPCQIC*ELSTLFPQPFCQGP*ADDSTSCV*NIWSVI*RGYNL 241
WRS + S+WTW+ GVPCQ+ ELS + +PF QG DD V*++ +V+ R + +
Sbjct: 194 AATWRS*V*SYWTWIRGVPCQVRRELSAVLAEPFRQGHRVDDLAYRV*DLRAVVPRSHRV 373
Query: 240 HLHHRIHVVHGGHLALCTIPVQSFWI*VAEDCG*LD*LAQVDQQSWRYWCGTREKLGVMV 61
HLH+ +HVVHG +LALC +PVQ FW+ VAEDCG*LD*L QVDQQ Y C EKLGVMV
Sbjct: 374 HLHNLLHVVHGRYLALCAVPVQPFWVRVAEDCG*LD*LEQVDQQPRGYRCFAGEKLGVMV 553
Query: 60 GKRAGAPSLLWEA 22
G+RA AP +L EA
Sbjct: 554 GERARAPEILREA 592
Score = 212 bits (458), Expect = 1e-054
Identities = 95/171 (55%), Positives = 119/171 (69%)
Frame = +3 / -1
Query: 90 HTNTSTIADPLVPISPVIHNLLPLKSRRIEQEWCKEPSAHHEPHGYGDEDVSYSPSI*LT 269
+T+T +ADPLVP+SPVIHNLLPL+ RR+EQE KEP HEPHG G EDV S+ L
Sbjct: 524 NTDTPAVADPLVPVSPVIHNLLPLEPRRVEQERRKEPGNDHEPHGEGYEDVRDGSSVRLP 345
Query: 270 KYFIHN**NHQLKALDKMAAGIKSIVLSKFGMEHHKPTSSGSVFRSSME*RPSVVVSFCS 449
+ H+ +HQL ALD+MA ++ IVL + GMEHH+ TSS S+ SSM R SVVVS S
Sbjct: 344 EDLKHDKQDHQLDALDEMAPRVQPIVLGELGMEHHESTSSSSILSSSM*QRLSVVVSLGS 165
Query: 450 QRECEENRGQLKLHQYKITQCSSESSLQTDFHHHGQRHQKSXXHKRX*RXS 602
+ ECEE+ LKLHQ+K+ QC E SLQT+ HHH + HQ++ HKR * S
Sbjct: 164 EGECEEDGC*LKLHQHKVAQCGPEPSLQTNLHHHRECHQEAKLHKRL*GKS 12
Score = 205 bits (443), Expect = 2e-052
Identities = 104/196 (53%), Positives = 127/196 (64%)
Frame = +2 / -3
Query: 14 RYRASQSNEGAPALFPTMTPSFSLVPHQYLHDC*STCANQSSHPQSSATQIQKD*TGMVQ 193
R AS+S GA AL PTMTP+FS H+Y C*STC++QSSHPQSSAT+ QK *TG Q
Sbjct: 600 RCHASRSISGARALSPTMTPNFSPAKHRYPRGC*STCSSQSSHPQSSATRTQKG*TGTAQ 421
Query: 194 RAKCPP*TTWIR**RCKL*PLYMTDQIFHTQLVESSAQGP*QNGCGNKVDSSQQIWHGTP 373
RA+ P*TTW R *RC L T + T+ SS + P*+NG + DSS++ WHGTP
Sbjct: 420 RAR*RP*TTWRRL*RCTRWLLGTTARRSQTR*ARSSTRCP*RNGSASTADSSRRTWHGTP 241
Query: 374 QTHVQWLCIPLLHGVTSFRSSEFLFPTRM*RKQRPTEAASV*NHSMQF*ILSPNRFPSSW 553
+ HVQ L LLH SFRSSE F RM*R++ TEAAS + SM+ * LSP++ PSS
Sbjct: 240 RIHVQ*LYTQLLHVAASFRSSESWFRGRM*RRRMLTEAASAQSRSMRS*TLSPDQSPSS* 61
Query: 554 AAPSKIXXAQKTLTXE 601
PS+ AQ T+ E
Sbjct: 60 GVPSRSQAAQTTVRQE 13
Score = 202 bits (436), Expect = 1e-051
Identities = 106/190 (55%), Positives = 115/190 (60%)
Frame = -3 / +1
Query: 583 LCXXDF*WRCP**WKSVWREDSELH*VILY*CSFSWPLFSSHSRWEQKLTTTEGRYSMEE 404
LC *W **W+ VWRE S H* L *CSFS SSHS E +LTTTE R MEE
Sbjct: 31 LCSLAS*WHSL**WRLVWREGSGPH*ATLC*CSFS*HPSSSHSPSEPRLTTTERRCYMEE 210
Query: 403 RNTEPLDVGLWCSMPNLLRTIDFIPAAILSRALS**FY*LCMKYLVSHIEGL*LTSSSPY 224
+ E LDV WCSMP+ RTI AI SRA S** C++ S E TSS P
Sbjct: 211 LSIELLDVDSWCSMPSSPRTIGCTRGAISSRASS**SCLSCLRSSGSRTEEPSRTSS*PS 390
Query: 223 PCGSWWALGSLHHSCSILLDLSGRRLWMTGLIGTSGSAIVEVLVWHQRKAGSHGGKKSRS 44
PCGSW GSL SCS LL SGRRLWMTGL GTSGSA V V+ +RK GSHGG+KS S
Sbjct: 391 PCGSWSLPGSLRRSCSTLLGSSGRRLWMTGLTGTSGSATAGVSVFRRRKVGSHGGRKSTS 570
Query: 43 PFVALGSAVP 14
P GS P
Sbjct: 571 P*NTPGSVAP 600
>gb|BM374437.2|BM374437 EBpi03_SQ003_J24_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ003_J24 5', mRNA sequence
Length = 573
Score = 336 bits (727), Expect = 1e-091
Identities = 141/168 (83%), Positives = 147/168 (87%)
Frame = -2 / +1
Query: 671 VXXXLDXXXXXXXRFVXNXXLQXAXASXSFVXXGFLMALPMMMEIGLERGFRTALSDFIL 492
V LD RF+ N LQ A AS SFV GFLMALPMMMEIGLERGFRTALSDF+L
Sbjct: 70 VLSGLDEGLATGRRFIHNNPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVL 249
Query: 491 MQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVK 312
MQLQLASVFFTFSLGTKTHYYG+TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVK
Sbjct: 250 MQLQLASVFFTFSLGTKTHYYGKTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVK 429
Query: 311 GLELMILLVVYEIFGQSYRGAITYIFITVSMWFMVGTWLFAPFLFNPS 168
G+ELMILL+V+EIFGQSYRGAI YIFIT SMWFMV TWLFAPFLFNPS
Sbjct: 430 GIELMILLIVFEIFGQSYRGAIAYIFITFSMWFMVVTWLFAPFLFNPS 573
Score = 238 bits (515), Expect = 2e-062
Identities = 109/155 (70%), Positives = 116/155 (74%)
Frame = +1 / -2
Query: 169 EGLNRNGAKSQVPTMNHMDTVMKM*VIAPLYD*PNXXXXXXXXXXXXPLTKWLRE*SR*F 348
EGLNRNGAKSQV TMNHM+ VMKM +AP YD P PLTKWLRE SR*F
Sbjct: 572 EGLNRNGAKSQVTTMNHMEKVMKMYAMAPRYDCPKISNTISKIINSMPLTKWLREYSR*F 393
Query: 349 SANLAWNTTNPRPVALYSAPPWSNVLP***VFVPNENVKKTEAN*SCISIKSLNAVLNPL 528
SANLAWNTTNPRPVALYSAPP S+V P***V VP ENVKKT+AN*SCIS KSLNAVLNPL
Sbjct: 392 SANLAWNTTNPRPVALYSAPPCSSVFP***VLVPRENVKKTDAN*SCISTKSLNAVLNPL 213
Query: 529 SKPISIIMGSAIKNPXXTKDXDAXAXXXXXXXTNL 633
S+PISII+GSAIK P T D +A A NL
Sbjct: 212 SRPISIIIGSAIKKPSCTNDCEARATWRGLLCINL 108
Score = 181 bits (390), Expect = 3e-045
Identities = 74/144 (51%), Positives = 99/144 (68%)
Frame = -1 / +3
Query: 600 SCVXVFCAXWIFDGAAHDDGNRFGERIQNCIE*FYTDAASVGLCFLHILVGNKNSLLRKD 421
SC+ V CA W+ DG +DDG+ GER+Q+ IE DAASV + LHIL N++SLLRKD
Sbjct: 141 SCLTVVCAAWLLDGTPYDDGDWSGERVQDRIERLCADAASVSIRLLHILPRNQDSLLRKD 320
Query: 420 VTPWRSGIQSHWTWVCGVPCQIC*ELSTLFPQPFCQGP*ADDSTSCV*NIWSVI*RGYNL 241
WRS + S+WTW+ GVPCQ+ ELS + +PF QG DD V*++ +V+ R + +
Sbjct: 321 AATWRS*V*SYWTWIRGVPCQVRRELSAVLAEPFRQGHRVDDLAYRV*DLRAVVPRSHRV 500
Query: 240 HLHHRIHVVHGGHLALCTIPVQSF 169
HLH+ +HVVHG +LALC +PVQ F
Sbjct: 501 HLHNLLHVVHGRYLALCAVPVQPF 572
Score = 173 bits (373), Expect = 7e-043
Identities = 80/155 (51%), Positives = 101/155 (65%)
Frame = +3 / -1
Query: 168 RRIEQEWCKEPSAHHEPHGYGDEDVSYSPSI*LTKYFIHN**NHQLKALDKMAAGIKSIV 347
RR+EQE KEP HEPHG G EDV S+ L + H+ +HQL ALD+MA ++ IV
Sbjct: 573 RRVEQERRKEPGNDHEPHGEGYEDVRDGSSVRLPEDLKHDKQDHQLDALDEMAPRVQPIV 394
Query: 348 LSKFGMEHHKPTSSGSVFRSSME*RPSVVVSFCSQRECEENRGQLKLHQYKITQCSSESS 527
L + GMEHH+ TSS S+ SSM R SVVVS S+ ECEE+ LKLHQ+K+ QC E S
Sbjct: 393 LGELGMEHHESTSSSSILSSSM*QRLSVVVSLGSEGECEEDGC*LKLHQHKVAQCGPEPS 214
Query: 528 LQTDFHHHGQRHQKSXXHKRX*RXSXLXXXIXHKP 632
LQT+ HHH + HQ++ HKR * S L + +KP
Sbjct: 213 LQTNLHHHRECHQEAKLHKRL*GKSDLERVVVYKP 109
Score = 134 bits (287), Expect = 5e-031
Identities = 76/154 (49%), Positives = 83/154 (53%)
Frame = -3 / +2
Query: 631 GLXXIXXXRXLXRQXLLCXXDF*WRCP**WKSVWREDSELH*VILY*CSFSWPLFSSHSR 452
GL + L LC *W **W+ VWRE S H* L *CSFS SSHS
Sbjct: 110 GLYTTTLSKSLLPHSRLCSLAS*WHSL**WRLVWREGSGPH*ATLC*CSFS*HPSSSHSP 289
Query: 451 WEQKLTTTEGRYSMEERNTEPLDVGLWCSMPNLLRTIDFIPAAILSRALS**FY*LCMKY 272
E +LTTTE R MEE + E LDV WCSMP+ RTI AI SRA S** C++
Sbjct: 290 SEPRLTTTERRCYMEELSIELLDVDSWCSMPSSPRTIGCTRGAISSRASS**SCLSCLRS 469
Query: 271 LVSHIEGL*LTSSSPYPCGSWWALGSLHHSCSIL 170
S E TSS P PCGSW GSL SCS L
Sbjct: 470 SGSRTEEPSRTSS*PSPCGSWSLPGSLRRSCSTL 571
Score = 132 bits (283), Expect = 2e-030
Identities = 71/144 (49%), Positives = 88/144 (61%)
Frame = +2 / -3
Query: 170 KD*TGMVQRAKCPP*TTWIR**RCKL*PLYMTDQIFHTQLVESSAQGP*QNGCGNKVDSS 349
K *TG QRA+ P*TTW R *RC L T + T+ SS + P*+NG + DSS
Sbjct: 571 KG*TGTAQRAR*RP*TTWRRL*RCTRWLLGTTARRSQTR*ARSSTRCP*RNGSASTADSS 392
Query: 350 QQIWHGTPQTHVQWLCIPLLHGVTSFRSSEFLFPTRM*RKQRPTEAASV*NHSMQF*ILS 529
++ WHGTP+ HVQ L LLH SFRSSE F RM*R++ TEAAS + SM+ * LS
Sbjct: 391 RRTWHGTPRIHVQ*LYTQLLHVAASFRSSESWFRGRM*RRRMLTEAASAQSRSMRS*TLS 212
Query: 530 PNRFPSSWAAPSKIXXAQKTLTXE 601
P++ PSS PS+ AQ T+ E
Sbjct: 211 PDQSPSS*GVPSRSQAAQTTVRQE 140
>gb|BF616755.1|BF616755 HVSMEc0012I18f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0012I18f, mRNA sequence
Length = 762
Score = 331 bits (717), Expect = 3e-090
Identities = 134/160 (83%), Positives = 142/160 (88%)
Frame = -2 / +3
Query: 494 LMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFV 315
LMQLQLASV FTFSLGTKTH+YG+TLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFV
Sbjct: 3 LMQLQLASVLFTFSLGTKTHWYGKTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFV 182
Query: 314 KGLELMILLVVYEIFGQSYRGAITYIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDW 135
KG+ELMILL+V+EIFGQSYRGAI YIFIT SMWFMV TWLFAPFLFNPSGFEWQKIVDDW
Sbjct: 183 KGIELMILLIVFEIFGQSYRGAIAYIFITFSMWFMVVTWLFAPFLFNPSGFEWQKIVDDW 362
Query: 134 TDWHKWISNRGGIGVAPXXXXXXXXXXEQEPLRCSGKRGT 15
TDW+KWI+NRGGIGV P E EPL+ S KRGT
Sbjct: 363 TDWNKWITNRGGIGVPPEKSWESWWEKEHEPLKYSRKRGT 482
Score = 286 bits (620), Expect = 6e-077
Identities = 124/163 (76%), Positives = 130/163 (79%)
Frame = +1 / -3
Query: 7 AREVPRFPEQRRGSCSFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRN 186
+R VPRF E RGSCSFSHHDSQLFSG TPIPPRL+IHL QSVQSSTIFCHSNPEGLNRN
Sbjct: 490 SRTVPRFREYFRGSCSFSHHDSQLFSGGTPIPPRLVIHLFQSVQSSTIFCHSNPEGLNRN 311
Query: 187 GAKSQVPTMNHMDTVMKM*VIAPLYD*PNXXXXXXXXXXXXPLTKWLRE*SR*FSANLAW 366
GAKSQV TMNHM+ VMKM +AP YD P PLTKWLRE SR*FSANLAW
Sbjct: 310 GAKSQVTTMNHMEKVMKMYAMAPRYDCPKISNTISKIINSMPLTKWLREYSR*FSANLAW 131
Query: 367 NTTNPRPVALYSAPPWSNVLP***VFVPNENVKKTEAN*SCIS 495
NTTNPRPVALYSAPP S+V P *V VP ENV KT+AN*SCIS
Sbjct: 130 NTTNPRPVALYSAPPCSSVFPYQ*VLVPRENVNKTDAN*SCIS 2
Score = 205 bits (442), Expect = 2e-052
Identities = 88/157 (56%), Positives = 112/157 (71%)
Frame = -1 / +2
Query: 492 DAASVGLCFLHILVGNKNSLLRKDVTPWRSGIQSHWTWVCGVPCQIC*ELSTLFPQPFCQ 313
DAASV + +HIL N++SL+RKD WRS + S+WTW+ GVPCQ+ ELS + +PF Q
Sbjct: 5 DAASVSIRLVHILPRNQDSLVRKDAATWRS*V*SYWTWIRGVPCQVRRELSAVLAEPFRQ 184
Query: 312 GP*ADDSTSCV*NIWSVI*RGYNLHLHHRIHVVHGGHLALCTIPVQSFWI*VAEDCG*LD 133
G DD V*++ +V+ R + +HLH+ +HVVHG +LALC +PVQ FW+ VAEDCG*LD
Sbjct: 185 GHRVDDLAYRV*DLRAVVPRSHRVHLHNLLHVVHGRYLALCAVPVQPFWVRVAEDCG*LD 364
Query: 132 *LAQVDQQSWRYWCGTREKLGVMVGKRAGAPSLLWEA 22
*L QVD Q Y C EKLGVMVG+RA AP +L EA
Sbjct: 365 *LEQVDHQPRGYRCSAGEKLGVMVGERARAPEILPEA 475
Score = 168 bits (362), Expect = 2e-041
Identities = 86/160 (53%), Positives = 103/160 (64%)
Frame = +2 / -1
Query: 14 RYRASQSNEGAPALFPTMTPSFSLVPHQYLHDC*STCANQSSHPQSSATQIQKD*TGMVQ 193
R AS S GA AL PTMTP+FS H+Y *STC++QSSHPQSSAT+ QK *TG Q
Sbjct: 483 RCHASGSISGARALSPTMTPNFSPAEHRYPRGW*STCSSQSSHPQSSATRTQKG*TGTAQ 304
Query: 194 RAKCPP*TTWIR**RCKL*PLYMTDQIFHTQLVESSAQGP*QNGCGNKVDSSQQIWHGTP 373
RA+ P*TTW R *RC L T + T+ SS + P*+NG + DSS++ WHGTP
Sbjct: 303 RAR*RP*TTWRRL*RCTRWLLGTTARRSQTR*ARSSTRCP*RNGSASTADSSRRTWHGTP 124
Query: 374 QTHVQWLCIPLLHGVTSFRSSEFLFPTRM*RKQRPTEAAS 493
+ HVQ L LLH SFR+SE F RM* ++ TEAAS
Sbjct: 123 RIHVQ*LYTQLLHVAASFRTSESWFRGRM*TRRMLTEAAS 4
Score = 166 bits (357), Expect = 1e-040
Identities = 88/160 (55%), Positives = 96/160 (60%)
Frame = -3 / +1
Query: 493 *CSFSWPLFSSHSRWEQKLTTTEGRYSMEERNTEPLDVGLWCSMPNLLRTIDFIPAAILS 314
*CSFS SHS E +LT TE R MEE + E LDV WCSMP+ RTI AI S
Sbjct: 4 *CSFS*HPSCSHSPSEPRLTGTERRCYMEELSIELLDVDSWCSMPSSPRTIGCTRGAISS 183
Query: 313 RALS**FY*LCMKYLVSHIEGL*LTSSSPYPCGSWWALGSLHHSCSILLDLSGRRLWMTG 134
RA S** C++ S E TSS P PCGSW GSL SCS LL SGRRLWMTG
Sbjct: 184 RASS**SCLSCLRSSGSRTEEPSRTSS*PSPCGSWSLPGSLRRSCSTLLGSSGRRLWMTG 363
Query: 133 LIGTSGSAIVEVLVWHQRKAGSHGGKKSRSPFVALGSAVP 14
L GTSGS V V+ +RK GSHGG+KS SP GS P
Sbjct: 364 LTGTSGSPTAGVSVFRRRKVGSHGGRKSTSP*NTPGSVAP 483
Score = 161 bits (346), Expect = 4e-039
Identities = 74/135 (54%), Positives = 93/135 (68%)
Frame = +3 / -2
Query: 90 HTNTSTIADPLVPISPVIHNLLPLKSRRIEQEWCKEPSAHHEPHGYGDEDVSYSPSI*LT 269
+T+T + DPLVP+SPVIHNLLPL+ RR+EQE KEP HEPHG G EDV S+ L
Sbjct: 407 NTDTPAVGDPLVPVSPVIHNLLPLEPRRVEQERRKEPGNDHEPHGEGYEDVRDGSSVRLP 228
Query: 270 KYFIHN**NHQLKALDKMAAGIKSIVLSKFGMEHHKPTSSGSVFRSSME*RPSVVVSFCS 449
+ H+ +HQL ALD+MA ++ IVL + GMEHH+ TSS S+ SSM R SV VS S
Sbjct: 227 EDLKHDKQDHQLDALDEMAPRVQPIVLGELGMEHHESTSSSSILSSSM*QRLSVPVSLGS 48
Query: 450 QRECEENRGQLKLHQ 494
+ ECE++ LKLHQ
Sbjct: 47 EGECEQDGC*LKLHQ 3
>gb|AY177665.1| Hordeum vulgare subsp. vulgare putative callose synthase mRNA,
complete cds
Length = 6180
Score = 271 bits (586), Expect(2) = 1e-073
Identities = 108/177 (61%), Positives = 132/177 (74%)
Frame = -2 / +3
Query: 620 NXXLQXAXASXSFVXXGFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTK 441
N L A + G A+PM++ LE G TA FI MQ QL SVFFTFSLGT+
Sbjct: 4677 NEALSIALNTQFLFQIGVFTAIPMILGFILEEGVLTAFVSFITMQFQLCSVFFTFSLGTR 4856
Query: 440 THYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELMILLVVYEIFGQS 261
THY+GRT+LHGGA+YRATGRGFVV H KFAENYRLYSRSHFVKGLE+ +LLV++ +G +
Sbjct: 4857 THYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKGLEVALLLVIFLAYGFN 5036
Query: 260 YRGAITYIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWISNRGGIGV 90
GAI YI +++S WFM +WLFAP++FNPSGFEWQK+V+D+ DW W+ RGGIGV
Sbjct: 5037 NSGAIGYILLSISSWFMALSWLFAPYVFNPSGFEWQKVVEDFRDWTNWLFYRGGIGV 5207
Score = 175 bits (377), Expect = 2e-043
Identities = 90/174 (51%), Positives = 103/174 (59%)
Frame = +1 / -3
Query: 52 SFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRNGAKSQVPTMNHMDTV 231
S SH SQL S TPIPPR QS++SST FCHSNP+GLN GAKSQ +N +
Sbjct: 5245 SSSHQASQLSSPLTPIPPR*KSQFVQSLKSSTTFCHSNPDGLNTYGAKSQERAINQLLME 5066
Query: 232 MKM*VIAPLYD*PNXXXXXXXXXXXXPLTKWLRE*SR*FSANLAWNTTNPRPVALYSAPP 411
K+* IAPL P P TKWLRE* R*FSANL TT P PVALY APP
Sbjct: 5065 SKI*PIAPLLLKP*ARKITNRSATSSPFTKWLRE*RR*FSANLICRTTKPLPVALYFAPP 4886
Query: 412 WSNVLP***VFVPNENVKKTEAN*SCISIKSLNAVLNPLSKPISIIMGSAIKNP 573
S V P **V VP ENVK TE + +C+ +K AV P S+ I+G A+ P
Sbjct: 4885 CSIVRPK**VLVPRENVKNTEHSWNCMVMKLTKAVRTPSSRMKPRIIGIAVNTP 4724
Score = 25.4 bits (49), Expect(2) = 1e-073
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1 / +2
Query: 99 YWCGTREKLGVMVGKRAGAPSLL 31
YW R KLG +VG R G S L
Sbjct: 5198 YWG*RRRKLGSLVG*RTGTYSHL 5266
>gb|BG369637.1|BG369637 HVSMEi0025E14f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025E14f, mRNA sequence
Length = 725
Score = 274 bits (593), Expect = 3e-073
Identities = 109/134 (81%), Positives = 117/134 (87%)
Frame = -2 / +2
Query: 416 LHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELMILLVVYEIFGQSYRGAITYI 237
LHGGAEYRATGRGF+ FHAKFAENYRLYSRSHFVKG+ELMILL+V+EIF QSYRGAI YI
Sbjct: 2 LHGGAEYRATGRGFLGFHAKFAENYRLYSRSHFVKGIELMILLIVFEIFRQSYRGAIAYI 181
Query: 236 FITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWISNRGGIGVAPXXXXXXXXX 57
FIT SMWFMV TWLFAPFLFNPSGF+WQKIVDDWTDW+KWISNRGGIGV+P
Sbjct: 182 FITFSMWFMVATWLFAPFLFNPSGFQWQKIVDDWTDWNKWISNRGGIGVSPEKSWESWWE 361
Query: 56 XEQEPLRCSGKRGT 15
E EPL+ SGKRGT
Sbjct: 362 KEHEPLKYSGKRGT 403
Score = 243 bits (524), Expect = 1e-063
Identities = 104/137 (75%), Positives = 107/137 (78%)
Frame = +1 / -3
Query: 7 AREVPRFPEQRRGSCSFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRN 186
+R VPRFPE RGSCSFSHHDSQLFSG TPIPPRLLIHL QSVQSSTIFCH NPEGLNRN
Sbjct: 411 SRTVPRFPEYFRGSCSFSHHDSQLFSGETPIPPRLLIHLFQSVQSSTIFCHWNPEGLNRN 232
Query: 187 GAKSQVPTMNHMDTVMKM*VIAPLYD*PNXXXXXXXXXXXXPLTKWLRE*SR*FSANLAW 366
GAKSQV TMNHM+ VMKM +AP YD PLTKWLRE SR*FSANLAW
Sbjct: 231 GAKSQVATMNHMEKVMKMYAMAPRYDCRKISNTISKIINSMPLTKWLREYSR*FSANLAW 52
Query: 367 NTTNPRPVALYSAPPWS 417
N NPRPVALYSAPP S
Sbjct: 51 NPRNPRPVALYSAPPCS 1
Score = 176 bits (379), Expect = 1e-043
Identities = 75/130 (57%), Positives = 95/130 (73%)
Frame = -1 / +1
Query: 411 WRSGIQSHWTWVCGVPCQIC*ELSTLFPQPFCQGP*ADDSTSCV*NIWSVI*RGYNLHLH 232
WRS + S+WTW+ GVPCQ+ ELS + +PF QG DD V*++ +V+ R + +HLH
Sbjct: 7 WRS*V*SYWTWIPGVPCQVRRELSAVLAEPFRQGHRVDDLAYRV*DLPAVVPRSHRVHLH 186
Query: 231 HRIHVVHGGHLALCTIPVQSFWI*VAEDCG*LD*LAQVDQQSWRYWCGTREKLGVMVGKR 52
+ +HVVHG +LALC +PVQ FW+ VA+DCG*LD*L QVDQQ Y C T EKLGVMVG+R
Sbjct: 187 NLLHVVHGRYLALCAVPVQPFWVPVAKDCG*LD*LEQVDQQPRGYRCFTGEKLGVMVGER 366
Query: 51 AGAPSLLWEA 22
A AP +L EA
Sbjct: 367 ARAPEILREA 396
Score = 146 bits (314), Expect = 1e-034
Identities = 73/133 (54%), Positives = 85/133 (63%)
Frame = +2 / -1
Query: 14 RYRASQSNEGAPALFPTMTPSFSLVPHQYLHDC*STCANQSSHPQSSATQIQKD*TGMVQ 193
R AS+S GA AL PTMTP+FS V H+Y C*STC++QSSHPQS AT QK *TG Q
Sbjct: 404 RCHASRSISGARALSPTMTPNFSPVKHRYPRGC*STCSSQSSHPQSFATGTQKG*TGTAQ 225
Query: 194 RAKCPP*TTWIR**RCKL*PLYMTDQIFHTQLVESSAQGP*QNGCGNKVDSSQQIWHGTP 373
RA+ P*TTW R *RC L T T+ SS + P*+NG + DSS++ WHGTP
Sbjct: 224 RAR*RP*TTWRRL*RCTRWLLGTTAGRSQTR*ARSSTRCP*RNGSASTADSSRRTWHGTP 45
Query: 374 QTHVQWLCIPLLH 412
HVQ L LLH
Sbjct: 44 GIHVQ*LYTQLLH 6
Score = 144 bits (310), Expect = 4e-034
Identities = 74/133 (55%), Positives = 82/133 (61%)
Frame = -3 / +3
Query: 412 MEERNTEPLDVGLWCSMPNLLRTIDFIPAAILSRALS**FY*LCMKYLVSHIEGL*LTSS 233
MEE + E LDV W SMP+ RTI AI SRA S** C++ S E TSS
Sbjct: 6 MEELSIELLDVDSWGSMPSSPRTIGCTRGAISSRASS**SCLSCLRSSGSRTEEPSRTSS 185
Query: 232 SPYPCGSWWALGSLHHSCSILLDLSGRRLWMTGLIGTSGSAIVEVLVWHQRKAGSHGGKK 53
P PCGSW GSL SCS LL SG+RLWMTGL GTSGSA V V+H+RK GSHGG+K
Sbjct: 186 *PSPCGSWSLPGSLRRSCSTLLGSSGKRLWMTGLTGTSGSATAGVSVFHRRKVGSHGGRK 365
Query: 52 SRSPFVALGSAVP 14
S SP GS P
Sbjct: 366 STSP*NTPGSVAP 404
Score = 134 bits (287), Expect = 5e-031
Identities = 59/108 (54%), Positives = 76/108 (70%)
Frame = +3 / -2
Query: 90 HTNTSTIADPLVPISPVIHNLLPLKSRRIEQEWCKEPSAHHEPHGYGDEDVSYSPSI*LT 269
+T+T +ADPLVP+SPVIHNLLPL+ RR+EQE KEP + HEPHG G EDV S+ L
Sbjct: 328 NTDTPAVADPLVPVSPVIHNLLPLEPRRVEQERRKEPGSDHEPHGEGYEDVRDGSSVRLP 149
Query: 270 KYFIHN**NHQLKALDKMAAGIKSIVLSKFGMEHHKPTSSGSVFRSSM 413
+ H+ +HQL ALD+MA ++ IVL + GME + TSS S+ SSM
Sbjct: 148 EDLKHDKQDHQLDALDEMAPRVQPIVLGELGMEPQESTSSSSILSSSM 5
>gb|BE215834.2|BE215834 HV_CEb0008J21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008J21f, mRNA sequence
Length = 504
Score = 247 bits (533), Expect = 6e-065
Identities = 97/148 (65%), Positives = 119/148 (80%)
Frame = -2 / +1
Query: 572 GFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYR 393
G A+PM++ LE G TA FI MQ QL SVFFTFSLGT+THY+GRT+LHGGA+YR
Sbjct: 61 GVFTAIPMILGFILEEGVLTAFVSFITMQFQLCSVFFTFSLGTRTHYFGRTILHGGAKYR 240
Query: 392 ATGRGFVVFHAKFAENYRLYSRSHFVKGLELMILLVVYEIFGQSYRGAITYIFITVSMWF 213
ATGRGFVV H KFAENYRLYSRSHFVKGLE+ +LLV++ +G + GAI YI +++S WF
Sbjct: 241 ATGRGFVVRHIKFAENYRLYSRSHFVKGLEVALLLVIFLAYGFNNSGAIGYILLSISSWF 420
Query: 212 MVGTWLFAPFLFNPSGFEWQKIVDDWTD 129
M +WLFAP++FNPSGFEWQK+V+D+ D
Sbjct: 421 MALSWLFAPYVFNPSGFEWQKVVEDFRD 504
Score = 150 bits (322), Expect = 8e-036
Identities = 76/148 (51%), Positives = 89/148 (60%)
Frame = +1 / -2
Query: 130 SVQSSTIFCHSNPEGLNRNGAKSQVPTMNHMDTVMKM*VIAPLYD*PNXXXXXXXXXXXX 309
S++SST FCHSNP+GLN GAKSQ +N + K+* IAPL P
Sbjct: 503 SLKSSTTFCHSNPDGLNTYGAKSQERAINQLLMESKI*PIAPLLLKP*ARKITNRSATSS 324
Query: 310 PLTKWLRE*SR*FSANLAWNTTNPRPVALYSAPPWSNVLP***VFVPNENVKKTEAN*SC 489
P TKWLRE* R*FSANL TT P PVALY APP S V P **V VP ENVK TE + +C
Sbjct: 323 PFTKWLRE*RR*FSANLICRTTKPLPVALYFAPPCSIVRPK**VLVPRENVKNTEHSWNC 144
Query: 490 ISIKSLNAVLNPLSKPISIIMGSAIKNP 573
+ +K AV P S+ I+G A+ P
Sbjct: 143 MVMKLTKAVRTPSSRMKPRIIGIAVNTP 60
>gb|CA031522.1|CA031522 HX10D22r HX Hordeum vulgare subsp. vulgare cDNA clone HX10D22
5-PRIME, mRNA sequence
Length = 478
Score = 239 bits (516), Expect(2) = 5e-064
Identities = 90/128 (70%), Positives = 110/128 (85%)
Frame = -2 / +3
Query: 473 SVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVKGLELMI 294
SVFFTFSLGT+THY+GRT+LHGGA+YRATGRGFVV H KFAENYRLYSRSHFVKGLE+ +
Sbjct: 3 SVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKGLEVAL 182
Query: 293 LLVVYEIFGQSYRGAITYIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWI 114
LLV++ +G + GAI YI +++S WFM +WLFAP++FNPSGFEWQK+V+D+ DW W+
Sbjct: 183 LLVIFLAYGFNNSGAIGYILLSISSWFMALSWLFAPYVFNPSGFEWQKVVEDFRDWTNWL 362
Query: 113 SNRGGIGV 90
RGGIGV
Sbjct: 363 FYRGGIGV 386
Score = 158 bits (339), Expect = 4e-038
Identities = 80/141 (56%), Positives = 86/141 (60%)
Frame = +1 / -1
Query: 52 SFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRNGAKSQVPTMNHMDTV 231
S SH SQL S TPIPPR QS++SST FCHSNP+GLN GAKSQ +N +
Sbjct: 424 SSSHQASQLSSPLTPIPPR*KSQFVQSLKSSTTFCHSNPDGLNTYGAKSQERAINQLLME 245
Query: 232 MKM*VIAPLYD*PNXXXXXXXXXXXXPLTKWLRE*SR*FSANLAWNTTNPRPVALYSAPP 411
K+* IAPL P P TKWLRE* R*FSANL TT P PVALY APP
Sbjct: 244 SKI*PIAPLLLKP*ARKITNRSATSSPFTKWLRE*RR*FSANLICRTTKPLPVALYFAPP 65
Query: 412 WSNVLP***VFVPNENVKKTE 474
S V P **V VP ENVK TE
Sbjct: 64 CSIVRPK**VLVPRENVKNTE 2
Score = 25.4 bits (49), Expect(2) = 5e-064
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1 / +2
Query: 99 YWCGTREKLGVMVGKRAGAPSLL 31
YW R KLG +VG R G S L
Sbjct: 377 YWG*RRRKLGSLVG*RTGTYSHL 445
>gb|CA018258.1|CA018258 HV08B15r HV Hordeum vulgare subsp. vulgare cDNA clone HV08B15
5-PRIME, mRNA sequence
Length = 654
Score = 231 bits (499), Expect = 3e-060
Identities = 94/109 (86%), Positives = 97/109 (88%)
Frame = -2 / +2
Query: 341 RLYSRSHFVKGLELMILLVVYEIFGQSYRGAITYIFITVSMWFMVGTWLFAPFLFNPSGF 162
RLYSRSHFVKG+ELMILLVVYEIFGQ+YRGAITYIFITVSMWFMVGTWLFAPFLFNPSGF
Sbjct: 11 RLYSRSHFVKGIELMILLVVYEIFGQTYRGAITYIFITVSMWFMVGTWLFAPFLFNPSGF 190
Query: 161 EWQKIVDDWTDWHKWISNRGGIGVAPXXXXXXXXXXEQEPLRCSGKRGT 15
EWQKIVDDWTDW+KWISNRGGIGVAP EQ PLR SGKRGT
Sbjct: 191 EWQKIVDDWTDWNKWISNRGGIGVAPEKSWESWWDKEQGPLRHSGKRGT 337
Score = 203 bits (438), Expect = 8e-052
Identities = 86/112 (76%), Positives = 89/112 (79%)
Frame = +1 / -1
Query: 7 AREVPRFPEQRRGSCSFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRN 186
+R VPRFPE RRG CS SHHDSQLFSGATPIPPRLLIHL QSVQSSTIFCHSNPEGLNR
Sbjct: 345 SRMVPRFPECRRGPCSLSHHDSQLFSGATPIPPRLLIHLFQSVQSSTIFCHSNPEGLNRK 166
Query: 187 GAKSQVPTMNHMDTVMKM*VIAPLYD*PNXXXXXXXXXXXXPLTKWLRE*SR 342
GAKSQVPT+NHM+TVMKM*VIAPLY P P TKWLRE SR
Sbjct: 165 GAKSQVPTINHMETVMKM*VIAPLYVCPKISYTTSRIISSIPFTKWLREYSR 10
Score = 177 bits (381), Expect = 6e-044
Identities = 73/107 (68%), Positives = 85/107 (79%)
Frame = -1 / +1
Query: 342 STLFPQPFCQGP*ADDSTSCV*NIWSVI*RGYNLHLHHRIHVVHGGHLALCTIPVQSFWI 163
+T+F QPF +G *ADDS V*N + + R Y+LHLHH HVV+GGHLALC++PVQSFWI
Sbjct: 10 ATVFSQPFREGY*ADDSACRV*NFRTDVQRSYHLHLHHCFHVVYGGHLALCSLPVQSFWI 189
Query: 162 *VAEDCG*LD*LAQVDQQSWRYWCGTREKLGVMVGKRAGAPSLLWEA 22
*VAEDC LD*L QVDQ WRYWCG REKLG++VG+RAG S LWEA
Sbjct: 190 *VAEDCRRLD*LEQVDQ*PWRYWCGAREKLGIVVGQRAGTSSALWEA 330
Score = 156 bits (336), Expect = 9e-038
Identities = 74/108 (68%), Positives = 81/108 (75%)
Frame = +2 / -2
Query: 23 ASQSNEGAPALFPTMTPSFSLVPHQYLHDC*STCANQSSHPQSSATQIQKD*TGMVQRAK 202
ASQS E PAL PT PSFSL PHQYLH *STC+NQSS QSSATQIQKD*TG QRA+
Sbjct: 329 ASQSAEEVPALCPTTIPSFSLAPHQYLHGY*STCSNQSSRLQSSATQIQKD*TGREQRAR 150
Query: 203 CPP*TTWIR**RCKL*PLYMTDQIFHTQLVESSAQGP*QNGCGNKVDS 346
CPP*TTW +**RCK * L + + FHT+ ESSAQ P +NGC N V S
Sbjct: 149 CPP*TTWKQ**RCK**LLCTSVRKFHTRQAESSAQYPSRNGCENTVAS 6
Score = 149 bits (320), Expect = 1e-035
Identities = 73/109 (66%), Positives = 76/109 (69%)
Frame = -3 / +3
Query: 340 DFIPAAILSRALS**FY*LCMKYLVSHIEGL*LTSSSPYPCGSWWALGSLHHSCSILLDL 161
D I AAI R LS**F CMK+ E L LTSSS +PCG WWA GSL SCSILLDL
Sbjct: 12 DCILAAIS*RVLS**FCLSCMKFSDRRTEELSLTSSSLFPCGLWWAPGSLLPSCSILLDL 191
Query: 160 SGRRLWMTGLIGTSGSAIVEVLVWHQRKAGSHGGKKSRSPFVALGSAVP 14
SGRRL TGLIGTSGS VEVLVW QRKAG+ GG KSR F LGS P
Sbjct: 192 SGRRL*TTGLIGTSGSVTVEVLVWRQRKAGNRGGTKSRDLFGTLGSVAP 338
Score = 141 bits (303), Expect = 3e-033
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +3 / -3
Query: 84 WCHTNTSTIADPLVPISPVIHNLLPLKSRRIEQEWCKEPSAHHEPHGYGDEDVSYSPSI* 263
W HTNTST+ DPLVPISPV++NLLPLKSRRIEQE KEP AHH+PHG DEDVS S S+
Sbjct: 268 WRHTNTSTVTDPLVPISPVVYNLLPLKSRRIEQEGSKEPGAHHKPHGNSDEDVSDSSSVR 89
Query: 264 LTKYFIHN**NHQLKALDKMAAGIKS 341
L++ FIH+ NHQL L +MAA I+S
Sbjct: 88 LSENFIHDKQNHQLNTLHEMAARIQS 11
>gb|CA027060.1|CA027060 HZ57M12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57M12
5-PRIME, mRNA sequence
Length = 384
Score = 194 bits (419), Expect = 3e-049
Identities = 78/100 (78%), Positives = 84/100 (84%)
Frame = -2 / +1
Query: 314 KGLELMILLVVYEIFGQSYRGAITYIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDW 135
KG+ELMILL+V+EIFGQSYRGAI YIFIT SMWFMV TWLFAPFLFNPSGFEWQKIVDDW
Sbjct: 4 KGIELMILLIVFEIFGQSYRGAIAYIFITFSMWFMVVTWLFAPFLFNPSGFEWQKIVDDW 183
Query: 134 TDWHKWISNRGGIGVAPXXXXXXXXXXEQEPLRCSGKRGT 15
T W+KWISNRGGIGV+P E EPL+ SGKRGT
Sbjct: 184 TVWNKWISNRGGIGVSPEKSWESWWEKEHEPLKYSGKRGT 303
Score = 178 bits (384), Expect = 2e-044
Identities = 75/103 (72%), Positives = 79/103 (76%)
Frame = +1 / -2
Query: 7 AREVPRFPEQRRGSCSFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRN 186
+R VPRFPE RGSCSFSHHDSQLFSG TPIPPRLLIHL Q+VQSSTIFCHSNPEGLNRN
Sbjct: 311 SRTVPRFPEYFRGSCSFSHHDSQLFSGDTPIPPRLLIHLFQTVQSSTIFCHSNPEGLNRN 132
Query: 187 GAKSQVPTMNHMDTVMKM*VIAPLYD*PNXXXXXXXXXXXXPL 315
GAKSQV TMNHM+ VMKM +AP YD P PL
Sbjct: 131 GAKSQVTTMNHMEKVMKMYAMAPRYDCPKISNTISKIINSMPL 3
Score = 126 bits (269), Expect = 2e-028
Identities = 55/93 (59%), Positives = 68/93 (73%)
Frame = -1 / +3
Query: 300 DDSTSCV*NIWSVI*RGYNLHLHHRIHVVHGGHLALCTIPVQSFWI*VAEDCG*LD*LAQ 121
DD V*++ +V+ R + +HLH+ +HVVHG +LALC +PVQ FW+ VAEDCG*LD L Q
Sbjct: 18 DDLAYRV*DLRAVVPRSHRVHLHNLLHVVHGRYLALCAVPVQPFWVRVAEDCG*LDCLEQ 197
Query: 120 VDQQSWRYWCGTREKLGVMVGKRAGAPSLLWEA 22
VDQQ Y C EKLGVMVG+RA AP +L EA
Sbjct: 198 VDQQPRGYRCVAGEKLGVMVGERARAPEILREA 296
Score = 111 bits (237), Expect = 4e-024
Identities = 57/100 (57%), Positives = 61/100 (61%)
Frame = -3 / +2
Query: 313 RALS**FY*LCMKYLVSHIEGL*LTSSSPYPCGSWWALGSLHHSCSILLDLSGRRLWMTG 134
RA S** C++ S E TSS P PCGSW GSL SCS LL SGRRLWMTG
Sbjct: 5 RASS**SCLSCLRSSGSRTEEPSRTSS*PSPCGSWSLPGSLRRSCSTLLGSSGRRLWMTG 184
Query: 133 LIGTSGSAIVEVLVWHQRKAGSHGGKKSRSPFVALGSAVP 14
L GTSGSA V V +RK GSHGG+KS SP GS P
Sbjct: 185 LSGTSGSATAGVSVCRRRKVGSHGGRKSTSP*NTPGSVAP 304
Score = 108 bits (230), Expect = 4e-023
Identities = 55/100 (55%), Positives = 64/100 (64%)
Frame = +2 / -3
Query: 14 RYRASQSNEGAPALFPTMTPSFSLVPHQYLHDC*STCANQSSHPQSSATQIQKD*TGMVQ 193
R AS+S GA AL PTMTP+FS H+Y C*STC+ QSSHPQSSAT+ QK *TG Q
Sbjct: 304 RCHASRSISGARALSPTMTPNFSPATHRYPRGC*STCSRQSSHPQSSATRTQKG*TGTAQ 125
Query: 194 RAKCPP*TTWIR**RCKL*PLYMTDQIFHTQLVESSAQGP 313
RA+ P*TTW R *RC L T + T+ SS + P
Sbjct: 124 RAR*RP*TTWRRL*RCTRWLLGTTARRSQTR*ARSSTRCP 5
>gb|BF627189.2|BF627189 HVSMEb0004D01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004D01f, mRNA sequence
Length = 765
Score = 175 bits (376), Expect = 3e-043
Identities = 72/85 (84%), Positives = 75/85 (88%)
Frame = +1 / -2
Query: 7 AREVPRFPEQRRGSCSFSHHDSQLFSGATPIPPRLLIHLCQSVQSSTIFCHSNPEGLNRN 186
+R VPRFPE RGSCSFSHHDSQLFSG TPIPPRLLIHL QSVQSSTIFCHSNPEGLNRN
Sbjct: 257 SRTVPRFPEYFRGSCSFSHHDSQLFSGETPIPPRLLIHLFQSVQSSTIFCHSNPEGLNRN 78
Query: 187 GAKSQVPTMNHMDTVMKM*VIAPLY 261
GAKSQV TMNHM+ VMKM +AP Y
Sbjct: 77 GAKSQVTTMNHMEKVMKMYAMAPRY 3
Score = 164 bits (353), Expect = 4e-040
Identities = 65/83 (78%), Positives = 68/83 (81%)
Frame = -2 / +1
Query: 263 SYRGAITYIFITVSMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWISNRGGIGVAP 84
SYRGAI YIFIT SMWFMV TWLFAPFLFNPSGFEWQKIVDDWTDW+KWISNRGGIGV+P
Sbjct: 1 SYRGAIAYIFITFSMWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVSP 180
Query: 83 XXXXXXXXXXEQEPLRCSGKRGT 15
E EPL+ SGKRGT
Sbjct: 181 EKSWESWWEKEHEPLKYSGKRGT 249
Score = 122 bits (260), Expect = 3e-027
Identities = 51/78 (65%), Positives = 60/78 (76%)
Frame = -1 / +3
Query: 255 RGYNLHLHHRIHVVHGGHLALCTIPVQSFWI*VAEDCG*LD*LAQVDQQSWRYWCGTREK 76
R + +HLH+ +HVVHG +LALC +PVQ FW+ VAEDCG*LD*L QVDQQ Y C EK
Sbjct: 9 RSHRVHLHNLLHVVHGRYLALCAVPVQPFWVRVAEDCG*LD*LEQVDQQPRGYRCFAGEK 188
Query: 75 LGVMVGKRAGAPSLLWEA 22
LGVMVG+RA AP +L EA
Sbjct: 189 LGVMVGERARAPEILREA 242
Score = 110 bits (235), Expect = 8e-024
Identities = 49/76 (64%), Positives = 52/76 (68%)
Frame = -3 / +2
Query: 241 TSSSPYPCGSWWALGSLHHSCSILLDLSGRRLWMTGLIGTSGSAIVEVLVWHQRKAGSHG 62
TSS P PCGSW GSL SCS LL SGRRLWMTGL GTSGSA V V+ +RK GSHG
Sbjct: 23 TSS*PSPCGSWSLPGSLRRSCSTLLGSSGRRLWMTGLTGTSGSATAGVSVFRRRKVGSHG 202
Query: 61 GKKSRSPFVALGSAVP 14
G+KS SP GS P
Sbjct: 203 GRKSTSP*NTPGSVAP 250
Score = 106 bits (227), Expect = 1e-022
Identities = 49/76 (64%), Positives = 56/76 (73%)
Frame = +2 / -3
Query: 14 RYRASQSNEGAPALFPTMTPSFSLVPHQYLHDC*STCANQSSHPQSSATQIQKD*TGMVQ 193
R AS+S GA AL PTMTP+FS H+Y C*STC++QSSHPQSSAT+ QK *TG Q
Sbjct: 250 RCHASRSISGARALSPTMTPNFSPAKHRYPRGC*STCSSQSSHPQSSATRTQKG*TGTAQ 71
Query: 194 RAKCPP*TTWIR**RC 241
RA+ P*TTW R *RC
Sbjct: 70 RAR*RP*TTWRRL*RC 23
>gb|AV932586.1|AV932586 AV932586 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1e06 5', mRNA sequence
Length = 582
Score = 173 bits (372), Expect = 1e-042
Identities = 75/96 (78%), Positives = 78/96 (81%)
Frame = -2 / +1
Query: 671 VXXXLDXXXXXXXRFVXNXXLQXAXASXSFVXXGFLMALPMMMEIGLERGFRTALSDFIL 492
V LD RF+ N LQ A AS SFV GFLMALPMMMEIGLERGFRTALSDF+L
Sbjct: 295 VLSGLDEGLATGRRFIHNNPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVL 474
Query: 491 MQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATG 384
MQLQLASVFFTFSLGTKTHYYG+TLLHGGAEYRATG
Sbjct: 475 MQLQLASVFFTFSLGTKTHYYGKTLLHGGAEYRATG 582
Score = 125 bits (268), Expect = 2e-028
Identities = 59/83 (71%), Positives = 64/83 (77%)
Frame = +1 / -2
Query: 385 PVALYSAPPWSNVLP***VFVPNENVKKTEAN*SCISIKSLNAVLNPLSKPISIIMGSAI 564
PVALYSAPP S+V P***V VP ENVKKT+AN*SCIS KSLNAVLNPLS+PISII+GSAI
Sbjct: 581 PVALYSAPPCSSVFP***VLVPRENVKKTDAN*SCISTKSLNAVLNPLSRPISIIIGSAI 402
Query: 565 KNPXXTKDXDAXAXXXXXXXTNL 633
K P T D +A A NL
Sbjct: 401 KKPSCTNDCEARATWRGLLCINL 333
>gb|BU982241.1|BU982241 HA25P01r HA Hordeum vulgare subsp. vulgare cDNA clone HA25P01
5-PRIME, mRNA sequence
Length = 300
Score = 170 bits (366), Expect = 7e-042
Identities = 65/83 (78%), Positives = 77/83 (92%)
Frame = -2 / +3
Query: 572 GFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYR 393
G L+ LPM+ME+GLE+GFRTA+ +FI+MQLQLASVFFTF LGTKTHYYGRT+LHGGA+YR
Sbjct: 51 GLLLVLPMVMEVGLEKGFRTAVGEFIIMQLQLASVFFTFQLGTKTHYYGRTILHGGAKYR 230
Query: 392 ATGRGFVVFHAKFAENYRLYSRS 324
TGRGFVV+HAKFA+NY +YSRS
Sbjct: 231 PTGRGFVVYHAKFADNYHMYSRS 299
Score = 105 bits (225), Expect = 2e-022
Identities = 52/88 (59%), Positives = 57/88 (64%)
Frame = +1 / -3
Query: 325 LRE*SR*FSANLAWNTTNPRPVALYSAPPWSNVLP***VFVPNENVKKTEAN*SCISIKS 504
LRE * SAN AW TTNPRPV LY APP S V P** V VP+ NVK TEAN*SC+ + S
Sbjct: 298 LREYM**LSANFAWYTTNPRPVGLYLAPPCSIVRP**CVLVPS*NVKNTEAN*SCMMMNS 119
Query: 505 LNAVLNPLSKPISIIMGSAIKNPXXTKD 588
AV NP SKP S+ +G NP D
Sbjct: 118 PTAVRNPFSKPTSMTIGRTSSNPSWKTD 35
>gb|AV934137.1|AV934137 AV934137 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11c09 5', mRNA sequence
Length = 589
Score = 168 bits (361), Expect = 3e-041
Identities = 73/94 (77%), Positives = 76/94 (80%)
Frame = -2 / +1
Query: 671 VXXXLDXXXXXXXRFVXNXXLQXAXASXSFVXXGFLMALPMMMEIGLERGFRTALSDFIL 492
V LD RF+ N LQ A AS SFV GFLMALPMMMEIGLERGFRTALSDF+L
Sbjct: 307 VLSGLDEGLATGRRFIHNNPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVL 486
Query: 491 MQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRA 390
MQLQLASVFFTFSLGTKTHYYG+TLLHGGAEYRA
Sbjct: 487 MQLQLASVFFTFSLGTKTHYYGKTLLHGGAEYRA 588
Score = 120 bits (257), Expect = 7e-027
Identities = 57/81 (70%), Positives = 62/81 (76%)
Frame = +1 / -3
Query: 391 ALYSAPPWSNVLP***VFVPNENVKKTEAN*SCISIKSLNAVLNPLSKPISIIMGSAIKN 570
ALYSAPP S+V P***V VP ENVKKT+AN*SCIS KSLNAVLNPLS+PISII+GSAIK
Sbjct: 587 ALYSAPPCSSVFP***VLVPRENVKKTDAN*SCISTKSLNAVLNPLSRPISIIIGSAIKK 408
Query: 571 PXXTKDXDAXAXXXXXXXTNL 633
P T D +A A NL
Sbjct: 407 PSCTNDCEARATWRGLLCINL 345
>gb|BE559011.2|BE559011 HV_CEb0022E12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022E12f, mRNA sequence
Length = 730
Score = 156 bits (335), Expect(2) = 1e-039
Identities = 63/94 (67%), Positives = 76/94 (80%)
Frame = -2 / +2
Query: 560 ALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGR 381
A+PM+M E G A+ FI MQLQ S+FFTFSLGT+THY+GRT+LHGGA++RATGR
Sbjct: 23 AVPMIMGFISELGLMKAIFSFITMQLQFCSLFFTFSLGTRTHYFGRTILHGGAKHRATGR 202
Query: 380 GFVVFHAKFAENYRLYSRSHFVKGLELMILLVVY 279
GFVV H KFA+NYRLYSRSHFVK LE+ +LL+ Y
Sbjct: 203 GFVVRHIKFADNYRLYSRSHFVKALEVALLLIAY 304
Score = 26.7 bits (52), Expect(2) = 1e-039
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2 / +1
Query: 218 WFMVGTWLFAPFLF 177
WF V W FAP++F
Sbjct: 367 WFKVIYWTFAPYIF 408
>gb|AV836635.1|AV836635 AV836635 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd19k01, mRNA
sequence
Length = 644
Score = 155 bits (333), Expect = 2e-037
Identities = 66/103 (64%), Positives = 74/103 (71%)
Frame = -2 / +2
Query: 620 NXXLQXAXASXSFVXXGFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTK 441
N L A + G A+PM++ LE G TA FI MQ QL SVFFTFSLGT+
Sbjct: 335 NEALSIALNTQFLFQIGVFTAIPMILGFILEEGVLTAFVSFITMQFQLCSVFFTFSLGTR 514
Query: 440 THYYGRTLLHGGAEYRATGRGFVVFHAKFAENYRLYSRSHFVK 312
THY+GRT+LHGGA+YRATGRGFVV H KFAENYRLYSRSHFVK
Sbjct: 515 THYFGRTILHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVK 643
>gb|BU971000.1|BU971000 HB16F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB16F02
5-PRIME, mRNA sequence
Length = 380
Score = 142 bits (305), Expect = 2e-033
Identities = 56/85 (65%), Positives = 68/85 (80%)
Frame = -2 / +3
Query: 581 VXXGFLMALPMMMEIGLERGFRTALSDFILMQLQLASVFFTFSLGTKTHYYGRTLLHGGA 402
+ GF ALPM++E LE GF A+ DF MQ+ +SVF+TFS+GTK+HYYGRT+LHGGA
Sbjct: 126 IQLGFFTALPMILENSLELGFLPAVWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILHGGA 305
Query: 401 EYRATGRGFVVFHAKFAENYRLYSR 327
+YRATGRGFVV H FAENYRLY+R
Sbjct: 306 KYRATGRGFVVQHKSFAENYRLYAR 380
>gb|BJ470174.1|BJ470174 BJ470174 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15l17 5', mRNA sequence
Length = 537
Score = 116 bits (248), Expect = 1e-025
Identities = 53/73 (72%), Positives = 55/73 (75%)
Frame = -2 / +3
Query: 671 VXXXLDXXXXXXXRFVXNXXLQXAXASXSFVXXGFLMALPMMMEIGLERGFRTALSDFIL 492
V LD RF+ N LQ A AS SFV GFLMALPMMMEIGLERGFRTALSDF+L
Sbjct: 318 VLSGLDEGLATGRRFIHNNPLQVALASQSFVQLGFLMALPMMMEIGLERGFRTALSDFVL 497
Query: 491 MQLQLASVFFTFS 453
MQLQLASVFFTFS
Sbjct: 498 MQLQLASVFFTFS 536
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 319,285,126
Number of Sequences: 312970
Number of extensions: 5303764
Number of successful extensions: 50508
Number of sequences better than 1.0e-020: 22
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7550174202
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)