TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBL10h01.xg.2.1
(610 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ763770.1|BQ763770 EBro03_SQ005_J09_R root, 3 week, wat... 301 3e-081
gb|BM816111.1|BM816111 HC113E12_SK.ab1 HC Hordeum vulgare s... 288 2e-077
gb|BQ760822.1|BQ760822 EBro03_SQ003_J06_R root, 3 week, wat... 223 7e-076
gb|CA030559.1|CA030559 HX07G17r HX Hordeum vulgare subsp. v... 254 2e-067
gb|CA023198.1|CA023198 HZ45I10r HZ Hordeum vulgare subsp. v... 222 1e-057
gb|BF630403.2|BF630403 HVSMEb0009B18f Hordeum vulgare seedl... 220 5e-057
gb|BF630623.2|BF630623 HVSMEb0012E18f Hordeum vulgare seedl... 220 5e-057
gb|BF631048.2|BF631048 HVSMEb0014N08f Hordeum vulgare seedl... 220 5e-057
gb|BF631110.2|BF631110 HVSMEb0015A04f Hordeum vulgare seedl... 220 5e-057
gb|AV922899.1|AV922899 AV922899 K. Sato unpublished cDNA li... 220 5e-057
gb|AV927108.1|AV927108 AV927108 K. Sato unpublished cDNA li... 220 5e-057
gb|BJ463118.1|BJ463118 BJ463118 K. Sato unpublished cDNA li... 220 5e-057
emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotra... 220 5e-057
gb|BF618866.2|BF618866 HVSMEc0008D05f Hordeum vulgare seedl... 218 2e-056
gb|BF263162.2|BF263162 HV_CEa0006A01f Hordeum vulgare seedl... 218 2e-056
gb|AV924203.1|AV924203 AV924203 K. Sato unpublished cDNA li... 217 5e-056
gb|BG301313.2|BG301313 HVSMEb0020K16f Hordeum vulgare seedl... 216 9e-056
gb|BF620598.2|BF620598 HVSMEc0020F14f Hordeum vulgare seedl... 211 2e-054
gb|BI778147.2|BI778147 EBro07_SQ002_F18_R root, 3 week, red... 206 7e-053
gb|BG300161.1|BG300161 HVSMEb0010K02f Hordeum vulgare seedl... 201 3e-051
gb|BM816097.1|BM816097 HC111H09_T3.ab1 HC Hordeum vulgare s... 126 3e-050
gb|BQ767749.1|BQ767749 EBro08_SQ009_B20_R root, 3 week, dro... 125 1e-046
gb|BF620985.1|BF620985 HVSMEa0003D18f Hordeum vulgare seedl... 186 1e-046
gb|CA008408.1|CA008408 HU10N24r HU Hordeum vulgare subsp. v... 186 1e-046
emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotr... 186 1e-046
gb|AV916008.1|AV916008 AV916008 K. Sato unpublished cDNA li... 184 3e-046
gb|AV925293.1|AV925293 AV925293 K. Sato unpublished cDNA li... 179 1e-044
gb|BQ460993.1|BQ460993 HE01I24r HE Hordeum vulgare subsp. v... 179 1e-044
gb|BI958669.1|BI958669 HVSMEn0016C05f Hordeum vulgare rachi... 177 3e-044
gb|BF629934.2|BF629934 HVSMEb0007F23f Hordeum vulgare seedl... 177 5e-044
gb|BI959766.1|BI959766 HVSMEn0021F17f Hordeum vulgare rachi... 105 6e-044
gb|BF256171.2|BF256171 HVSMEf0008P16f Hordeum vulgare seedl... 167 4e-041
gb|BI958667.1|BI958667 HVSMEn0016C03f Hordeum vulgare rachi... 166 7e-041
gb|BI959504.1|BI959504 HVSMEn0019O24f Hordeum vulgare rachi... 162 1e-039
gb|BF622057.1|BF622057 HVSMEa0001K09f Hordeum vulgare seedl... 162 2e-039
gb|BI956298.1|BI956298 HVSMEn0002B22f Hordeum vulgare rachi... 134 8e-038
gb|BF618271.2|BF618271 HVSMEc0005D16f Hordeum vulgare seedl... 155 2e-037
gb|AL504934.1|AL504934 AL504934 Hordeum vulgare Barke roots... 155 3e-037
gb|BG309526.2|BG309526 HVSMEc0010M24f Hordeum vulgare seedl... 154 5e-037
gb|BF627429.2|BF627429 HVSMEb0004N10f Hordeum vulgare seedl... 151 3e-036
gb|BF267606.1|BF267606 HV_CEa0018G10f Hordeum vulgare seedl... 103 3e-034
gb|CA019178.1|CA019178 HV11B18r HV Hordeum vulgare subsp. v... 101 1e-033
gb|BF254604.1|BF254604 HVSMEf0004H21f Hordeum vulgare seedl... 141 4e-033
gb|BI958113.1|BI958113 HVSMEn0013H08f Hordeum vulgare rachi... 104 6e-033
gb|BE216242.1|BE216242 HV_CEb0009P07f Hordeum vulgare seedl... 99 1e-032
gb|BG368127.1|BG368127 HVSMEi0015M23f Hordeum vulgare 20 DA... 98 2e-032
gb|BQ759958.1|BQ759958 EBpi05_SQ004_P23_R pistil, 8 DPA, no... 101 2e-032
emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotra... 100 3e-032
gb|BG300583.1|BG300583 HVSMEb0017J11f Hordeum vulgare seedl... 100 3e-032
gb|BF626739.2|BF626739 HVSMEb0001D16f Hordeum vulgare seedl... 100 3e-032
gb|BF627738.2|BF627738 HVSMEb0005K17f Hordeum vulgare seedl... 100 3e-032
gb|BG310036.1|BG310036 HVSMEc0016C04f Hordeum vulgare seedl... 100 3e-032
gb|BG309440.1|BG309440 HVSMEc0010E08f Hordeum vulgare seedl... 100 3e-032
gb|BF631278.2|BF631278 HVSMEb0015H17f Hordeum vulgare seedl... 100 3e-032
gb|AL500460.1|AL500460 AL500460 Hordeum vulgare Barke etiol... 100 3e-032
gb|AL450913.1|AL450913 AL450913 Hordeum vulgare Barke etiol... 100 3e-032
gb|BQ764817.1|BQ764817 EBca01_SQ005_A06_R carpel, pre-anthe... 100 3e-032
gb|BG300865.1|BG300865 HVSMEb0018L19f Hordeum vulgare seedl... 100 3e-032
gb|BM370804.2|BM370804 EBro04_SQ002_F05_R root, 3 week, sal... 100 3e-032
gb|CA020574.1|CA020574 HZ36L09r HZ Hordeum vulgare subsp. v... 100 3e-032
gb|BQ462941.1|BQ462941 HI02H24r HI Hordeum vulgare subsp. v... 100 3e-032
gb|BQ764772.1|BQ764772 EBca01_SQ004_H24_R carpel, pre-anthe... 100 3e-032
gb|AL500129.1|AL500129 AL500129 Hordeum vulgare Barke etiol... 100 6e-032
gb|BF628380.2|BF628380 HVSMEb0003O02f Hordeum vulgare seedl... 99 1e-031
emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotra... 97 2e-031
gb|BF624089.2|BF624089 HVSMEa0009G06f Hordeum vulgare seedl... 97 2e-031
gb|BF260656.2|BF260656 HVSMEf0022J12f Hordeum vulgare seedl... 97 2e-031
gb|BQ467526.1|BQ467526 HS04B01r HS Hordeum vulgare subsp. v... 97 2e-031
gb|BE060552.2|BE060552 HVSMEg0012J20f Hordeum vulgare pre-a... 97 2e-031
gb|BU997685.1|BU997685 HI08L09r HI Hordeum vulgare subsp. v... 97 2e-031
gb|BQ467998.1|BQ467998 HR01J18r HR Hordeum vulgare subsp. v... 97 2e-031
gb|BU997928.1|BU997928 HI09H06r HI Hordeum vulgare subsp. v... 97 2e-031
gb|CA024504.1|CA024504 HZ49H21r HZ Hordeum vulgare subsp. v... 97 4e-031
gb|BU997613.1|BU997613 HI08H24r HI Hordeum vulgare subsp. v... 99 4e-031
gb|BQ460689.1|BQ460689 HA06D17r HA Hordeum vulgare subsp. v... 96 6e-031
gb|BF629221.2|BF629221 HVSMEb0010F24f Hordeum vulgare seedl... 96 8e-031
gb|BI953155.1|BI953155 HVSMEm0011G01f Hordeum vulgare green... 92 1e-030
gb|BF260946.2|BF260946 HVSMEf0023F18f Hordeum vulgare seedl... 95 1e-030
gb|BI960618.1|BI960618 HVSMEn0025G09f Hordeum vulgare rachi... 95 1e-030
gb|BF259456.3|BF259456 HVSMEf0019C15f Hordeum vulgare seedl... 100 1e-030
gb|AL450643.1|AL450643 AL450643 Hordeum vulgare Barke etiol... 95 2e-030
gb|BE195774.3|BE195774 HVSMEh0090G19f Hordeum vulgare 5-45 ... 94 4e-030
gb|BI954358.1|BI954358 HVSMEm0017G17f Hordeum vulgare green... 90 4e-030
gb|BF629930.2|BF629930 HVSMEb0007F19f Hordeum vulgare seedl... 97 4e-030
gb|CA027653.1|CA027653 HZ59J16r HZ Hordeum vulgare subsp. v... 100 5e-030
gb|BI957177.1|BI957177 HVSMEn0007P14f Hordeum vulgare rachi... 94 5e-030
gb|CA007079.1|CA007079 HU06K21r HU Hordeum vulgare subsp. v... 92 1e-029
gb|BU971950.1|BU971950 HB20C15r BC Hordeum vulgare subsp. v... 129 1e-029
gb|BF618579.2|BF618579 HVSMEc0006G01f Hordeum vulgare seedl... 91 2e-029
gb|BE455947.3|BE455947 HVSMEg0017N10f Hordeum vulgare pre-a... 89 6e-029
gb|BI778475.2|BI778475 EBro07_SQ003_G13_R root, 3 week, red... 97 6e-029
gb|BQ465021.1|BQ465021 HU02G22r HU Hordeum vulgare subsp. v... 94 9e-029
gb|CA031564.1|CA031564 HX10H03r HX Hordeum vulgare subsp. v... 92 2e-028
gb|CB883507.1|CB883507 HQ02H12w HQ Hordeum vulgare subsp. v... 92 2e-028
gb|BU998122.1|BU998122 HI10B03r HI Hordeum vulgare subsp. v... 92 2e-028
emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan tr... 90 4e-028
gb|BM816264.1|BM816264 HB01H02_T3.ab1 HB Hordeum vulgare su... 90 4e-028
gb|AL450708.1|AL450708 AL450708 Hordeum vulgare Barke etiol... 90 4e-028
gb|BI780996.2|BI780996 EBma03_SQ001_B17_R maternal, 8 DPA, ... 90 4e-028
gb|BQ460892.1|BQ460892 HE01O03r HE Hordeum vulgare subsp. v... 90 4e-028
gb|BF622776.2|BF622776 HVSMEa0008K20f Hordeum vulgare seedl... 87 4e-027
gb|BJ446906.1|BJ446906 BJ446906 K. Sato unpublished cDNA li... 121 4e-027
gb|BJ447562.1|BJ447562 BJ447562 K. Sato unpublished cDNA li... 121 4e-027
gb|BF627685.3|BF627685 HVSMEb0005I10f Hordeum vulgare seedl... 83 9e-027
gb|BF627004.2|BF627004 HVSMEb0001P03f Hordeum vulgare seedl... 82 1e-026
gb|BI958106.1|BI958106 HVSMEn0013G22f Hordeum vulgare rachi... 99 1e-026
gb|BI960420.1|BI960420 HVSMEn0024I16f Hordeum vulgare rachi... 73 7e-026
gb|BF627541.2|BF627541 HVSMEb0005C03f Hordeum vulgare seedl... 82 2e-025
gb|BG343074.1|BG343074 HVSMEg0001P08f Hordeum vulgare pre-a... 84 2e-025
gb|BF625577.3|BF625577 HVSMEa0011I16f Hordeum vulgare seedl... 115 3e-025
gb|CA029613.1|CA029613 HZ65L12r HZ Hordeum vulgare subsp. v... 79 6e-025
gb|CA026923.1|CA026923 HZ57F20r HZ Hordeum vulgare subsp. v... 90 6e-025
gb|BF620863.2|BF620863 HVSMEa0003F12f Hordeum vulgare seedl... 79 8e-025
gb|BQ462594.1|BQ462594 HI01G12T HI Hordeum vulgare subsp. v... 75 1e-024
gb|BF618456.2|BF618456 HVSMEc0005L21f Hordeum vulgare seedl... 58 1e-024
gb|BI956580.1|BI956580 HVSMEn0004E02f Hordeum vulgare rachi... 111 3e-024
gb|CB877507.1|CB877507 HP05D02T HP Hordeum vulgare subsp. v... 100 5e-024
gb|AL500119.1|AL500119 AL500119 Hordeum vulgare Barke etiol... 100 5e-024
gb|BI956297.1|BI956297 HVSMEn0002B20f Hordeum vulgare rachi... 110 7e-024
gb|AV914496.1|AV914496 AV914496 K. Sato unpublished cDNA li... 108 2e-023
gb|AW982755.3|AW982755 HVSMEg0004C03f Hordeum vulgare pre-a... 100 3e-023
gb|BQ471752.1|BQ471752 HV03F21r HV Hordeum vulgare subsp. v... 90 1e-022
gb|BG309189.1|BG309189 HVSMEc0004M02f Hordeum vulgare seedl... 105 2e-022
gb|BF629579.2|BF629579 HVSMEb0013G15f Hordeum vulgare seedl... 68 1e-021
gb|AL503674.1|AL503674 AL503674 Hordeum vulgare Barke roots... 58 2e-021
gb|BE194552.3|BE194552 HVSMEh0085P21f Hordeum vulgare 5-45 ... 54 3e-021
gb|CA024667.1|CA024667 HZ49P10r HZ Hordeum vulgare subsp. v... 101 4e-021
>gb|BQ763770.1|BQ763770 EBro03_SQ005_J09_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_J09 5', mRNA sequence
Length = 729
Score = 301 bits (651), Expect = 3e-081
Identities = 120/148 (81%), Positives = 130/148 (87%)
Frame = +1 / +3
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WLD+RF TDGTVRTGYD SGQQVVML L+Q SGAAGFNSK+QYLYGEFS++MKLI GNSA
Sbjct: 138 WLDKRFNTDGTVRTGYDASGQQVVMLNLNQQSGAAGFNSKQQYLYGEFSIQMKLIPGNSA 317
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADY 525
GTVSCFYLSSGD + RDEIDMEFMGNSSG PVVLNTNVWA+GDGKKEHQFDLWFDP+ADY
Sbjct: 318 GTVSCFYLSSGDDEWRDEIDMEFMGNSSGHPVVLNTNVWANGDGKKEHQFDLWFDPAADY 497
Query: 526 HTYTIIWNXTNILXXXXDLFXXXXKRYA 609
HTYTIIWN NIL +LF KR+A
Sbjct: 498 HTYTIIWNPENILFKVDNLFIRSFKRFA 581
Score = 243 bits (526), Expect = 5e-064
Identities = 107/147 (72%), Positives = 110/147 (74%)
Frame = -3 / -3
Query: 602 RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLE 423
RL MKR RM FQMMV*VW*SA GSNQRSNWCSFLPSPLAHTLV STTG PLE
Sbjct: 574 RLKDRMKRLSTLKRMFSGFQMMV*VW*SAAGSNQRSNWCSFLPSPLAHTLVLSTTGWPLE 395
Query: 422 LXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRR 243
L PEER*K ETVPAEFP MSFI LNSP*RYC LEL PAAP+CW R
Sbjct: 394 LPMNSMSISSRHSSSPEER*KQETVPAEFPGMSFIWMLNSP*RYCCLELNPAAPDCWLRL 215
Query: 242 SITTCWPESSYPVRTVPSVVNLLSSHD 162
SITTCWPE+SYPVRTVPSV+NLLSS D
Sbjct: 214 SITTCWPEASYPVRTVPSVLNLLSSQD 134
Score = 160 bits (344), Expect(2) = 2e-044
Identities = 70/94 (74%), Positives = 80/94 (85%)
Frame = -2 / -2
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHR+ A VAHELHVDLVAP+ V GR+VEA DGAGGV DELHLDAELAV+VLLLGVE+G
Sbjct: 419 EHHRVAAGVAHELHVDLVAPLVVTGRKVEAGDGAGGVSRDELHLDAELAVEVLLLGVESG 240
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
AG+LVE EH+HLLAR VVS ADGAV EP ++P
Sbjct: 239 GAGLLVEVEHNHLLARGVVSGADGAVGVEPFIEP 138
Score = 82.6 bits (174), Expect(4) = 4e-030
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +2 / +1
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T LP T +GATRSTWSSWAT A +RWC TPTCGP ATARR
Sbjct: 337 TFLPVTTSGATRSTWSSWATPAATRWCSTPTCGPTATARR 456
Score = 38.6 bits (78), Expect(2) = 2e-044
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 459 APSCRRRWPTRW 424
Score = 38.2 bits (77), Expect(4) = 4e-030
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G GS TAPSA DTT RASRW C
Sbjct: 139 GSIKGSTPTAPSAPDTTPRASRWLC 213
Score = 36.3 bits (73), Expect(4) = 4e-030
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 288 AVPLRRVQRRDEAHPGE 338
AVPLRRVQ DEAHPG+
Sbjct: 260 AVPLRRVQHPDEAHPGK 310
Score = 29.0 bits (57), Expect(4) = 4e-030
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +2
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EP +HP +PLH QALR
Sbjct: 518 EPGEHPLQGGQPLHPILQALR 580
>gb|BM816111.1|BM816111 HC113E12_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC113E12_SK.ab1 similar to Glucan
endo-1,6-beta-glucosidase,Cellulase,
Xyloglucan:xyloglucosyl
transferase,Licheninase,Endo-1,3(4)-beta-glucanase,
Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 858
Score = 288 bits (623), Expect = 2e-077
Identities = 117/148 (79%), Positives = 124/148 (83%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WLD RF TDGTVRTGYD SGQQVVML L+Q SGAAGFNSK+QYLYGEFS+ MKLI GNSA
Sbjct: 176 WLDNRFNTDGTVRTGYDASGQQVVMLNLNQQSGAAGFNSKQQYLYGEFSIHMKLIPGNSA 355
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADY 525
GTVSCFYLSSGD + RDEIDMEFMGNS G VVLNTNVWA+GDGKKEHQFDLWFDP+ DY
Sbjct: 356 GTVSCFYLSSGDDEWRDEIDMEFMGNSIGHTVVLNTNVWANGDGKKEHQFDLWFDPADDY 535
Query: 526 HTYTIIWNXTNILXXXXDLFXXXXKRYA 609
HTYTIIWN NIL +LF KR A
Sbjct: 536 HTYTIIWNPDNILFKVDNLFIRSFKRLA 619
Score = 238 bits (514), Expect(2) = 2e-063
Identities = 104/147 (70%), Positives = 110/147 (74%)
Frame = -3 / -1
Query: 602 RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLE 423
RL MKR RML FQMMV*VW*S+ GSNQRSNWCSFLPSPLAHT V STT P+E
Sbjct: 612 RLKDRMKRLSTLNRMLSGFQMMV*VW*SSAGSNQRSNWCSFLPSPLAHTFVLSTTVWPME 433
Query: 422 LXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRR 243
L PEER*K ETVPAEFP MSF+ LNSP*RYC LELKPAAP+CW R
Sbjct: 432 LPMNSMSISSRHSSSPEER*KQETVPAEFPGMSFMWMLNSP*RYCCLELKPAAPDCWLRL 253
Query: 242 SITTCWPESSYPVRTVPSVVNLLSSHD 162
SITTCWPE+SYPVRTVPSV+NLLSS D
Sbjct: 252 SITTCWPEASYPVRTVPSVLNLLSSQD 172
Score = 164 bits (353), Expect(2) = 3e-044
Identities = 69/94 (73%), Positives = 79/94 (84%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHR+ VAHELHVDLVAP+ V GR+VEA DGAGGVP DELH+DA+L ++VLLLGVEAG
Sbjct: 457 EHHRMADGVAHELHVDLVAPLVVTGRKVEAGDGAGGVPRDELHVDAKLTIEVLLLGVEAG 278
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
AG+LVE EHHHLLAR VVSR DG VR EP V+P
Sbjct: 277 GAGLLVEVEHHHLLARGVVSRTDGTVRVEPIVEP 176
Score = 75.8 bits (159), Expect(3) = 1e-021
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T LP T +GATRSTWSSWAT + RWC T TCGP ATARR
Sbjct: 375 TFLPVTTSGATRSTWSSWATPSAIRWCSTRTCGPTATARR 494
Score = 45.1 bits (92), Expect(3) = 1e-021
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T GS RT PS RDTT RASRW*C
Sbjct: 177 GSTIGSTRTVPSVRDTTPRASRW*C 251
Score = 33.6 bits (67), Expect(2) = 3e-044
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 497 APSCRRRWPTR 465
Score = 24.4 bits (47), Expect(2) = 2e-063
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 177 PVKPRRLGRGGVQERE 130
P+ LGRGG+QER+
Sbjct: 190 PIVEPGLGRGGLQERK 143
Score = 22.1 bits (42), Expect(3) = 1e-021
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3 / +1
Query: 546 EPDQHPXXXRRPLHXXXQAL 605
EP HP +PLH Q L
Sbjct: 556 EPG*HPVQGGQPLHPILQTL 615
>gb|BQ760822.1|BQ760822 EBro03_SQ003_J06_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_J06 5', mRNA sequence
Length = 646
Score = 223 bits (481), Expect(2) = 7e-076
Identities = 88/110 (80%), Positives = 96/110 (87%)
Frame = +1 / +2
Query: 280 SKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNV 459
SK+QYLYGEFS++MKLI GNSAGTVSCFYLSSGD + RDEIDMEFMGNSSG PVVLNTNV
Sbjct: 257 SKQQYLYGEFSIQMKLIPGNSAGTVSCFYLSSGDDEWRDEIDMEFMGNSSGHPVVLNTNV 436
Query: 460 WASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
WA+GDGKKEHQFDLWFDP+ADYHTYTIIWN NIL +LF KR+A
Sbjct: 437 WANGDGKKEHQFDLWFDPAADYHTYTIIWNPENILFKVDNLFIRSFKRFA 586
Score = 160 bits (344), Expect(3) = 1e-060
Identities = 74/110 (67%), Positives = 76/110 (69%)
Frame = -3 / -2
Query: 602 RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLE 423
RL MKR RM FQMMV*VW*SA GSNQRSNWCSFLPSPLAHT V STTG PLE
Sbjct: 579 RLKDRMKRLSTLNRMFSGFQMMV*VW*SAAGSNQRSNWCSFLPSPLAHTFVLSTTGWPLE 400
Query: 422 LXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELK 273
L PEER*K ETVPAEFP MSFI LNSP*RYC LE++
Sbjct: 399 LPMNSMSISSRHSSSPEER*KQETVPAEFPGMSFIWMLNSP*RYCCLEVE 250
Score = 103 bits (219), Expect(3) = 6e-042
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLG 280
+HHR+ A VAHELHVDLVAP+ V GR+VEA DGA GVP DELHLDAEL ++VLLLG
Sbjct: 424 EHHRMAAGVAHELHVDLVAPLVVTGRKVEAGDGASGVPRDELHLDAELTIEVLLLG 257
Score = 88.1 bits (186), Expect(3) = 1e-060
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -3 / -3
Query: 281 ELKPAAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSHD 162
+LKPAAP+CW R SITTCWPE+SYPVRTVPSV+NLLSS D
Sbjct: 257 KLKPAAPDCWLRLSITTCWPEASYPVRTVPSVLNLLSSQD 138
Score = 80.8 bits (170), Expect(2) = 7e-076
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFN 279
WLD+RF TDGTVRTGYD SGQQVVML L+Q SGAAGFN
Sbjct: 142 WLDKRFNTDGTVRTGYDASGQQVVMLNLNQQSGAAGFN 255
Score = 77.1 bits (162), Expect(4) = 4e-030
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = +2 / +3
Query: 365 TSLPATATGATRSTWSSWATRAGSRWC*TPTCGPAATARR 484
T LP T +GATRSTWSSWAT A RWC T TCGP ATARR
Sbjct: 342 TFLPVTTSGATRSTWSSWATPAAIRWCSTRTCGPTATARR 461
Score = 72.1 bits (151), Expect(3) = 6e-042
Identities = 32/40 (80%), Positives = 34/40 (85%)
Frame = -2 / -2
Query: 285 LGVEAGSAGVLVEAEHHHLLARIVVSRADGAVRGEPPVKP 166
L VEAG AG+LVE EHHHLLAR VVSRADGAVR EP V+P
Sbjct: 261 LEVEAGGAGLLVEVEHHHLLARGVVSRADGAVRVEPLVEP 142
Score = 49.6 bits (102), Expect(4) = 4e-030
Identities = 21/25 (84%), Positives = 21/25 (84%)
Frame = +2 / +2
Query: 167 GLTGGSPRTAPSARDTTIRASRW*C 241
G T GS RTAPSARDTT RASRW*C
Sbjct: 143 GSTRGSTRTAPSARDTTPRASRW*C 217
Score = 33.6 bits (67), Expect(3) = 6e-042
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -1 / -3
Query: 487 APSCRRRWPTR 455
APSCRRRWPTR
Sbjct: 464 APSCRRRWPTR 432
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3 / +1
Query: 288 AVPLRRVQRRDEAHPGE 338
AVPL VQ DEAHPGE
Sbjct: 265 AVPLW*VQHPDEAHPGE 315
Score = 29.0 bits (57), Expect(4) = 4e-030
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EP +HP +PLH QALR
Sbjct: 523 EPGEHPVQGGQPLHPILQALR 585
Score = 23.5 bits (45), Expect(3) = 1e-060
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 177 PVKPRRLGRGGVQERE 130
P+ LGRGG+QER+
Sbjct: 156 PLVEPGLGRGGLQERK 109
>gb|CA030559.1|CA030559 HX07G17r HX Hordeum vulgare subsp. vulgare cDNA clone HX07G17
5-PRIME, mRNA sequence
Length = 634
Score = 254 bits (550), Expect = 2e-067
Identities = 101/145 (69%), Positives = 113/145 (77%)
Frame = +1 / +2
Query: 175 RRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTV 354
R TTDG VR Y+ GQQV L L Q SG F S+ +YLYGEFS++MKL+ GNSAGTV
Sbjct: 155 RGVTTDGNVRADYNAQGQQVASLILTQQSGGGAFGSRRKYLYGEFSIQMKLVPGNSAGTV 334
Query: 355 SCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTY 534
+ FYLSSGDG G DEIDMEFMGNS+GQPVVLNTNVWA+GDGKKEHQFDLWFDP+ADYHTY
Sbjct: 335 TSFYLSSGDGPGHDEIDMEFMGNSTGQPVVLNTNVWANGDGKKEHQFDLWFDPAADYHTY 514
Query: 535 TIIWNXTNILXXXXDLFXXXXKRYA 609
TIIWN N++ DLF RYA
Sbjct: 515 TIIWNHKNVIFKVDDLFIRSFTRYA 589
Score = 169 bits (363), Expect = 1e-041
Identities = 82/142 (57%), Positives = 90/142 (63%)
Frame = -3 / -2
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*R+ MKRS + FQMMV*VW*SA GSNQRSNWCSFLPSPLAHTLV STTGCP
Sbjct: 588 A*RVKLRMKRSSTLKMTFLWFQMMV*VW*SAAGSNQRSNWCSFLPSPLAHTLVLSTTGCP 409
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWS 249
+EL P++R*K TVPAE P SFI LNSP*RY E K P+C
Sbjct: 408 VELPMNSMSISSCPGPSPDDR*KEVTVPAELPGTSFIWMLNSP*RYLRREPKAPPPDCCV 229
Query: 248 RRSITTCWPESSYPVRTVPSVV 183
R S TC P + RT+PSVV
Sbjct: 228 RMSDATCCPCAL*SARTLPSVV 163
Score = 127 bits (272), Expect(2) = 1e-034
Identities = 59/88 (67%), Positives = 64/88 (72%)
Frame = -2 / -1
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV P AVA R+VE DGAGGV DELHLDAELAV+VL G E
Sbjct: 427 EHHRLPRGVAHELHVDLVVPGAVARRQVEGGDGAGGVAGDELHLDAELAVEVLAPGAEGA 248
Query: 267 SAGVLVEAEHHHLLARIVVSRADGAVRG 184
+AG+L E E HLL VV RA AVRG
Sbjct: 247 AAGLLCEDERRHLLPLRVVVRAHVAVRG 164
Score = 38.6 bits (78), Expect(2) = 1e-034
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 467 APSCRRRWPTRW 432
>gb|CA023198.1|CA023198 HZ45I10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45I10
5-PRIME, mRNA sequence
Length = 518
Score = 222 bits (480), Expect = 1e-057
Identities = 85/116 (73%), Positives = 96/116 (82%)
Frame = +1 / +1
Query: 262 GAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPV 441
G F S+ +YLYGEFS++MKL+ GNSAGTV+ FYLSSGDG G DEIDMEFMGNS+GQPV
Sbjct: 1 GGGAFGSRRKYLYGEFSIQMKLVPGNSAGTVTSFYLSSGDGPGHDEIDMEFMGNSTGQPV 180
Query: 442 VLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
VLNTNVWA+GDGKKEHQFDLWFDP+ADYHTYTIIWN N++ DLF RYA
Sbjct: 181 VLNTNVWANGDGKKEHQFDLWFDPAADYHTYTIIWNHKNVIFKVDDLFIRSFTRYA 348
Score = 144 bits (308), Expect = 6e-034
Identities = 69/112 (61%), Positives = 74/112 (66%)
Frame = -3 / -1
Query: 608 A*RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
A*R+ MKRS + FQMMV*VW*SA GSNQRSNWCSFLPSPLAHTLV STTGCP
Sbjct: 347 A*RVKLRMKRSSTLKMTFLWFQMMV*VW*SAAGSNQRSNWCSFLPSPLAHTLVLSTTGCP 168
Query: 428 LELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELK 273
+EL P++R*K TVPAE P SFI LNSP*RY E K
Sbjct: 167 VELPMNSMSISSCPGPSPDDR*KEVTVPAELPGTSFIWMLNSP*RYLRREPK 12
Score = 100 bits (214), Expect(2) = 9e-027
Identities = 44/62 (70%), Positives = 48/62 (77%)
Frame = -2 / -3
Query: 447 QHHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAG 268
+HHRLP VAHELHVDLV P AVA R+VE DGAGGV DELHLDAELAV+VL G E
Sbjct: 186 EHHRLPRGVAHELHVDLVVPGAVARRQVEGGDGAGGVAGDELHLDAELAVEVLAPGAEGA 7
Query: 267 SA 262
+A
Sbjct: 6 AA 1
Score = 38.6 bits (78), Expect(2) = 9e-027
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 487 APSCRRRWPTRW 452
APSCRRRWPTRW
Sbjct: 226 APSCRRRWPTRW 191
>gb|BF630403.2|BF630403 HVSMEb0009B18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009B18f, mRNA sequence
Length = 725
Score = 220 bits (475), Expect = 5e-057
Identities = 87/131 (66%), Positives = 104/131 (79%)
Frame = +1 / +1
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 196 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 375
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 376 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 555
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 556 DDVPVRTFKKY 588
Score = 136 bits (291), Expect = 1e-031
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = -3 / -1
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 542 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 363
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 362 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 183
Query: 200 TVP 192
+P
Sbjct: 182 LLP 174
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -3
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 426 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 247
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 246 AVALVERERHLLGDAVVV 193
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 469 APSCRRRWPRRW 434
>gb|BF630623.2|BF630623 HVSMEb0012E18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0012E18f, mRNA sequence
Length = 715
Score = 220 bits (475), Expect = 5e-057
Identities = 87/131 (66%), Positives = 104/131 (79%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 191 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 370
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 371 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPQNIIFQV 550
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 551 DDVPVRTFKKY 583
Score = 134 bits (287), Expect = 4e-031
Identities = 69/123 (56%), Positives = 74/123 (60%)
Frame = -3 / -2
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 537 MFWGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 358
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 357 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 178
Query: 200 TVP 192
+P
Sbjct: 177 LLP 169
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -1
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 421 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 242
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 241 AVALVERERHLLGDAVVV 188
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 464 APSCRRRWPRRW 429
>gb|BF631048.2|BF631048 HVSMEb0014N08f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014N08f, mRNA sequence
Length = 759
Score = 220 bits (475), Expect = 5e-057
Identities = 87/131 (66%), Positives = 104/131 (79%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 188 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 367
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 368 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 547
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 548 DDVPVRTFKKY 580
Score = 136 bits (291), Expect = 1e-031
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = -3 / -1
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 534 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 355
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 354 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 175
Query: 200 TVP 192
+P
Sbjct: 174 LLP 166
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -3
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 418 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 239
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 238 AVALVERERHLLGDAVVV 185
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 461 APSCRRRWPRRW 426
>gb|BF631110.2|BF631110 HVSMEb0015A04f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015A04f, mRNA sequence
Length = 755
Score = 220 bits (475), Expect = 5e-057
Identities = 87/131 (66%), Positives = 104/131 (79%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 188 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 367
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 368 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 547
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 548 DDVPVRTFKKY 580
Score = 136 bits (291), Expect = 1e-031
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = -3 / -3
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 534 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 355
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 354 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 175
Query: 200 TVP 192
+P
Sbjct: 174 LLP 166
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -2
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 418 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 239
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 238 AVALVERERHLLGDAVVV 185
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 461 APSCRRRWPRRW 426
>gb|AV922899.1|AV922899 AV922899 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2n22 5', mRNA sequence
Length = 642
Score = 220 bits (475), Expect = 5e-057
Identities = 87/131 (66%), Positives = 104/131 (79%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 194 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 373
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 374 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 553
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 554 DDVPVRTFKKY 586
Score = 136 bits (291), Expect = 1e-031
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = -3 / -1
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 540 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 361
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 360 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 181
Query: 200 TVP 192
+P
Sbjct: 180 LLP 172
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -3
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 424 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 245
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 244 AVALVERERHLLGDAVVV 191
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 467 APSCRRRWPRRW 432
>gb|AV927108.1|AV927108 AV927108 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26m16 5', mRNA sequence
Length = 640
Score = 220 bits (475), Expect = 5e-057
Identities = 87/131 (66%), Positives = 104/131 (79%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 194 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 373
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 374 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 553
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 554 DDVPVRTFKKY 586
Score = 136 bits (291), Expect = 1e-031
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = -3 / -2
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 540 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 361
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 360 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 181
Query: 200 TVP 192
+P
Sbjct: 180 LLP 172
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -1
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 424 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 245
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 244 AVALVERERHLLGDAVVV 191
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 467 APSCRRRWPRRW 432
>gb|BJ463118.1|BJ463118 BJ463118 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25n11 5', mRNA sequence
Length = 613
Score = 220 bits (475), Expect = 5e-057
Identities = 87/131 (66%), Positives = 104/131 (79%)
Frame = +1 / +1
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 169 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 348
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 349 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 528
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 529 DDVPVRTFKKY 561
Score = 136 bits (291), Expect = 1e-031
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = -3 / -3
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 515 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 336
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 335 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 156
Query: 200 TVP 192
+P
Sbjct: 155 LLP 147
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -2
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 399 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 220
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 219 AVALVERERHLLGDAVVV 166
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 442 APSCRRRWPRRW 407
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
(PM5)
Length = 1188
Score = 220 bits (475), Expect = 5e-057
Identities = 87/131 (66%), Positives = 104/131 (79%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 188 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 367
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 368 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 547
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 548 DDVPVRTFKKY 580
Score = 136 bits (291), Expect = 1e-031
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = -3 / -1
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 534 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 355
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 354 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 175
Query: 200 TVP 192
+P
Sbjct: 174 LLP 166
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -3
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 418 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 239
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 238 AVALVERERHLLGDAVVV 185
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 461 APSCRRRWPRRW 426
>gb|BF618866.2|BF618866 HVSMEc0008D05f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0008D05f, mRNA sequence
Length = 817
Score = 218 bits (471), Expect = 2e-056
Identities = 86/131 (65%), Positives = 103/131 (78%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 188 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 367
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+ D+HTY I+WN NI+
Sbjct: 368 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTGDFHTYRIVWNPKNIIFQV 547
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 548 DDVPVRTFKKY 580
Score = 133 bits (286), Expect = 6e-031
Identities = 68/123 (55%), Positives = 74/123 (60%)
Frame = -3 / -2
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW S GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 534 MFLGFQTIL*VWKSPVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 355
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 354 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 175
Query: 200 TVP 192
+P
Sbjct: 174 LLP 166
Score = 100 bits (214), Expect(2) = 6e-026
Identities = 48/78 (61%), Positives = 55/78 (70%)
Frame = -2 / -1
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAEL V+VL+LG EAG+
Sbjct: 418 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELXVEVLVLGAEAGA 239
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 238 AVALVERERHLLGDAVVV 185
Score = 35.9 bits (72), Expect(2) = 6e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 461 APSCRRRWPRRW 426
>gb|BF263162.2|BF263162 HV_CEa0006A01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006A01f, mRNA sequence
Length = 593
Score = 218 bits (471), Expect = 2e-056
Identities = 86/131 (65%), Positives = 103/131 (78%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 188 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 367
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+ D+HTY I+WN NI+
Sbjct: 368 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTGDFHTYKIVWNPKNIIFQV 547
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 548 DDVPVRTFKKY 580
Score = 133 bits (286), Expect = 6e-031
Identities = 68/123 (55%), Positives = 74/123 (60%)
Frame = -3 / -3
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW S GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 534 MFLGFQTIL*VWKSPVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 355
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 354 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 175
Query: 200 TVP 192
+P
Sbjct: 174 LLP 166
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -2
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 418 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 239
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 238 AVALVERERHLLGDAVVV 185
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 461 APSCRRRWPRRW 426
>gb|AV924203.1|AV924203 AV924203 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd11l14 5', mRNA sequence
Length = 572
Score = 217 bits (468), Expect = 5e-056
Identities = 85/123 (69%), Positives = 101/123 (82%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 194 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 373
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 374 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 553
Query: 574 XDL 582
D+
Sbjct: 554 DDV 562
Score = 136 bits (291), Expect = 1e-031
Identities = 69/123 (56%), Positives = 75/123 (60%)
Frame = -3 / -3
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 540 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 361
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVR 201
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 360 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRT 181
Query: 200 TVP 192
+P
Sbjct: 180 LLP 172
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -2
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 424 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 245
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 244 AVALVERERHLLGDAVVV 191
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 467 APSCRRRWPRRW 432
>gb|BG301313.2|BG301313 HVSMEb0020K16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020K16f, mRNA sequence
Length = 901
Score = 216 bits (466), Expect = 9e-056
Identities = 86/131 (65%), Positives = 103/131 (78%)
Frame = +1 / +3
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 189 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 368
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXX 573
DEID+ FMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+
Sbjct: 369 DEIDI*FMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQV 548
Query: 574 XDLFXXXXKRY 606
D+ K+Y
Sbjct: 549 DDVPVRTFKKY 581
Score = 102 bits (218), Expect(2) = 1e-038
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -3
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 419 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 240
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 239 AVALVERERHLLGDAVVV 186
Score = 76.7 bits (161), Expect(2) = 1e-038
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / -1
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLEL 420
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 535 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRL 395
>gb|BF620598.2|BF620598 HVSMEc0020F14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0020F14f, mRNA sequence
Length = 882
Score = 211 bits (456), Expect = 2e-054
Identities = 82/112 (73%), Positives = 96/112 (85%)
Frame = +1 / +1
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 181 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 360
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWN 549
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN
Sbjct: 361 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWN 516
Score = 134 bits (287), Expect = 4e-031
Identities = 68/122 (55%), Positives = 75/122 (61%)
Frame = -3 / -2
Query: 557 LVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXX 378
++ FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 524 VLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSPS 345
Query: 377 PEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRT 198
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP P WS S T SS+
Sbjct: 344 PDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRTL 165
Query: 197 VP 192
+P
Sbjct: 164 LP 159
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -1
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 411 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 232
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 231 AVALVERERHLLGDAVVV 178
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 454 APSCRRRWPRRW 419
>gb|BI778147.2|BI778147 EBro07_SQ002_F18_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_F18 5', mRNA sequence
Length = 622
Score = 206 bits (445), Expect = 7e-053
Identities = 79/115 (68%), Positives = 95/115 (82%)
Frame = +1 / +1
Query: 262 GAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPV 441
G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG DEID+EFMGN SG P
Sbjct: 1 GGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGHDEIDIEFMGNLSGDPY 180
Query: 442 VLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRY 606
V+NTNVWASGDGKKEHQF LWFDP+AD+HTY I+WN NI+ D+ K+Y
Sbjct: 181 VMNTNVWASGDGKKEHQFYLWFDPTADFHTYKIVWNPKNIIFQVDDVPVRTFKKY 345
Score = 126 bits (269), Expect = 1e-028
Identities = 61/97 (62%), Positives = 65/97 (67%)
Frame = -3 / -3
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M + FQ ++*VW SA GSNQR NWCSFLPSPLA TLVF T G PL L
Sbjct: 299 MFLGFQTIL*VWKSAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSP 120
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
P+ R*K TVPAE P MSFI TLNSP*RY SLELKP
Sbjct: 119 SPDVR*KEVTVPAELPPMSFIWTLNSP*RYLSLELKP 9
Score = 90.4 bits (191), Expect(2) = 8e-023
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = -2 / -2
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 183 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 4
Query: 264 A 262
A
Sbjct: 3 A 1
Score = 35.9 bits (72), Expect(2) = 8e-023
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 226 APSCRRRWPRRW 191
>gb|BG300161.1|BG300161 HVSMEb0010K02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010K02f, mRNA sequence
Length = 515
Score = 201 bits (433), Expect = 3e-051
Identities = 79/107 (73%), Positives = 92/107 (85%)
Frame = +1 / +1
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 193 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 372
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTY 534
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWFDP+AD+HTY
Sbjct: 373 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWFDPTADFHTY 513
Score = 122 bits (262), Expect = 1e-027
Identities = 63/110 (57%), Positives = 66/110 (60%)
Frame = -3 / -1
Query: 521 SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPA 342
SA GSNQR NWCSFLPSPLA TLVF T G PL L P+ R*K TVPA
Sbjct: 500 SAVGSNQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSPSPDVR*KEVTVPA 321
Query: 341 EFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVP 192
E P MSFI TLNSP*RY SLELKP P WS S T SS+ +P
Sbjct: 320 ELPPMSFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRTLLP 171
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -3
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 423 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 244
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 243 AVALVERERHLLGDAVVV 190
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 466 APSCRRRWPRRW 431
>gb|BM816097.1|BM816097 HC111H09_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111H09_T3.ab1 similar to Glucan
endo-1,6-beta-glucosidase,Cellulase,
Xyloglucan:xyloglucosyl
transferase,Licheninase,Endo-1,3(4)-beta-glucanase,
Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 918
Score = 126 bits (269), Expect(4) = 2e-040
Identities = 53/72 (73%), Positives = 57/72 (79%)
Frame = +1 / +1
Query: 217 DSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRD 396
D+ Q V+ AGFNS EQYLYGEFS++MKLI GNSAGTVSCFYLSSGDGDG D
Sbjct: 211 DASGQQVVTLSLDQHSGAGFNSDEQYLYGEFSIQMKLIPGNSAGTVSCFYLSSGDGDGHD 390
Query: 397 EIDMEFMGNSSG 432
EIDMEFMGNSSG
Sbjct: 391 EIDMEFMGNSSG 426
Score = 122 bits (261), Expect(3) = 6e-046
Identities = 47/78 (60%), Positives = 55/78 (70%)
Frame = +1 / +1
Query: 376 GDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXT 555
GDG +++ + G PVVLNTNVW +GDGKKEHQFDLWFDP+ADYHTYTIIWN
Sbjct: 376 GDGHDEIDMEFMGNSSGPGHPVVLNTNVWVNGDGKKEHQFDLWFDPAADYHTYTIIWNPE 555
Query: 556 NILXXXXDLFXXXXKRYA 609
NIL +LF KR+A
Sbjct: 556 NILFKVDNLFIRSFKRFA 609
Score = 95.9 bits (203), Expect(3) = 3e-050
Identities = 42/58 (72%), Positives = 42/58 (72%)
Frame = -3 / -2
Query: 602 RLXXXMKRSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
RL MKR RM FQMMV*VW*SA GSNQRSNWCSFLPSPL TLV STTG P
Sbjct: 602 RLKDRMKRLSTLKRMFSGFQMMV*VW*SAAGSNQRSNWCSFLPSPLTQTLVLSTTGWP 429
Score = 95.5 bits (202), Expect(2) = 1e-021
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = -2 / -1
Query: 423 VAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEA 244
VAHELHVDLV PV++ GR+VEA GAG V DELHLDAEL V+VLL+GVEAG+ ++
Sbjct: 417 VAHELHVDLVVPVSITGRKVEAGYGAGRVSRDELHLDAELTVEVLLIGVEAGA*VLVEAE 238
Query: 243 EHHHLLARIV 214
HH L +V
Sbjct: 237 RHHLLPRSVV 208
Score = 71.6 bits (150), Expect(3) = 3e-050
Identities = 35/55 (63%), Positives = 36/55 (65%)
Frame = -3 / -2
Query: 431 PLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
PLEL PEER*K +TVPAEFP MSFI LNSP*RYCS ELKPA
Sbjct: 425 PLELPMNSMSISSCPSPSPEER*KQDTVPAEFPGMSFIWMLNSP*RYCSSELKPA 261
Score = 69.3 bits (145), Expect(3) = 3e-050
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -3 / -2
Query: 266 APECWSRRSITTCWPESSYPVRTVPSVVNLLSS 168
APECWSR S+TTC PE+SYPVRT+PSV+NL SS
Sbjct: 263 APECWSRLSVTTCCPEASYPVRTLPSVLNLSSS 165
Score = 68.0 bits (142), Expect(3) = 6e-046
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WLD +F TDG VRTGYD SGQQVV L LDQHSGA
Sbjct: 163 WLDDKFNTDGNVRTGYDASGQQVVTLSLDQHSGA 264
Score = 35.0 bits (70), Expect(4) = 2e-040
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 435 AGGAEHQRVGQRRRQEGA 488
+G A+HQR+GQRR QEGA
Sbjct: 435 SGSAQHQRLGQRRWQEGA 488
Score = 31.8 bits (63), Expect(3) = 6e-046
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3 / +3
Query: 288 AVPLRRVQRRDEAHPGE 338
A+PLR VQ DEAHPG+
Sbjct: 282 AIPLR*VQHPDEAHPGK 332
Score = 31.3 bits (62), Expect(4) = 2e-040
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2 / +2
Query: 167 GLTGGSPRTAPSARDTTIRASRW* 238
G S RTA S RDTT+ SRW*
Sbjct: 164 GSMTSSTRTAMSGRDTTLLGSRW* 235
Score = 29.0 bits (57), Expect(4) = 2e-040
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3 / +3
Query: 546 EPDQHPXXXRRPLHXXXQALR 608
EP +HP +PLH QALR
Sbjct: 546 EPGEHPLQGGQPLHPVLQALR 608
Score = 26.7 bits (52), Expect(2) = 1e-021
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSC RR P RW
Sbjct: 487 APSCHRR*PRRW 452
>gb|BQ767749.1|BQ767749 EBro08_SQ009_B20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_B20 5', mRNA sequence
Length = 516
Score = 125 bits (267), Expect(3) = 1e-046
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1 / +1
Query: 265 AAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSG 432
+AGFNS EQYLYGEFS++MKLI GNSAGTVSCFYLSSGDGDG DEIDMEFMGNSSG
Sbjct: 220 SAGFNSDEQYLYGEFSIQMKLIPGNSAGTVSCFYLSSGDGDGHDEIDMEFMGNSSG 387
Score = 105 bits (224), Expect(3) = 2e-029
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = +1 / +1
Query: 376 GDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWN 549
GDG +++ + G PVVLNTNVW +GDGKKEH FDLWFDP+ADYHTYTIIWN
Sbjct: 337 GDGHDEIDMEFMGNSSGPGHPVVLNTNVWVNGDGKKEHHFDLWFDPAADYHTYTIIWN 510
Score = 95.9 bits (203), Expect(2) = 1e-021
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = -2 / -1
Query: 423 VAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEA 244
VAHELHVDLV PV++ GR+VEA GAG V DELHLDAEL V+VLL+GVEAG+ ++
Sbjct: 378 VAHELHVDLVVPVSITGRKVEAGYGAGRVSRDELHLDAELTVEVLLIGVEAGA*VLVEAE 199
Query: 243 EHHHLLARIV 214
HH L +V
Sbjct: 198 RHHLLPRNVV 169
Score = 82.2 bits (173), Expect(3) = 8e-045
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -3 / -2
Query: 548 FQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
FQMMV*VW*SA GSNQRS WCSFLPSPL TLV STTG P
Sbjct: 509 FQMMV*VW*SAAGSNQRSKWCSFLPSPLTQTLVLSTTGWP 390
Score = 71.6 bits (150), Expect(3) = 8e-045
Identities = 35/55 (63%), Positives = 36/55 (65%)
Frame = -3 / -2
Query: 431 PLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPA 267
PLEL PEER*K +TVPAEFP MSFI LNSP*RYCS ELKPA
Sbjct: 386 PLELPMNSMSISSCPSPSPEER*KQDTVPAEFPGMSFIWMLNSP*RYCSSELKPA 222
Score = 64.8 bits (135), Expect(3) = 8e-045
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = -3 / -2
Query: 266 APECWSRRSITTCWPESSYPVRTVPSVVNLLSS 168
A ECWSR S+TTC PE+SYPVRT+PSV+NL SS
Sbjct: 224 ALECWSRLSVTTCCPETSYPVRTLPSVLNLSSS 126
Score = 64.8 bits (135), Expect(3) = 1e-046
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGA 267
WLD +F TDG VRTGYD SGQQVV L LDQHS A
Sbjct: 124 WLDDKFNTDGNVRTGYDVSGQQVVTLSLDQHSSA 225
Score = 35.0 bits (70), Expect(3) = 1e-046
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 435 AGGAEHQRVGQRRRQEGA 488
+G A+HQR+GQRR QEGA
Sbjct: 396 SGSAQHQRLGQRRWQEGA 449
Score = 31.8 bits (63), Expect(3) = 2e-029
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3 / +3
Query: 288 AVPLRRVQRRDEAHPGE 338
A+PLR VQ DEAHPG+
Sbjct: 243 AIPLR*VQHPDEAHPGK 293
Score = 29.0 bits (57), Expect(3) = 2e-029
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2 / +2
Query: 167 GLTGGSPRTAPSARDTTIRASRW* 238
G S RTA S RDTT S+W*
Sbjct: 125 GSMTSSTRTAMSGRDTTFLGSKW* 196
Score = 26.7 bits (52), Expect(2) = 1e-021
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -3
Query: 487 APSCRRRWPTRW 452
APSC RR P RW
Sbjct: 448 APSCHRR*PRRW 413
>gb|BF620985.1|BF620985 HVSMEa0003D18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0003D18f, mRNA sequence
Length = 870
Score = 186 bits (400), Expect = 1e-046
Identities = 73/113 (64%), Positives = 86/113 (76%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF SK +YL+GEF V MKL+ GNSAGTV+ FYL+SG+ DEID+EFMGNSSG P V+
Sbjct: 240 SGFKSKAKYLFGEFQVRMKLVDGNSAGTVTSFYLTSGESATHDEIDIEFMGNSSGDPYVM 419
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRY 606
NTNVWASGDGKKEHQF LWFDPSAD+HTY I WN NI+ + K+Y
Sbjct: 420 NTNVWASGDGKKEHQFYLWFDPSADFHTYKITWNPKNIIFEVDGVPVRTFKKY 578
Score = 120 bits (257), Expect = 6e-027
Identities = 57/97 (58%), Positives = 62/97 (63%)
Frame = -3 / -3
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M F +++*VW SAEGSNQR NWCSFLPSPLA TLVF T G PLE
Sbjct: 532 MFFGFHVIL*VWKSAEGSNQR*NWCSFLPSPLAQTLVFIT*GSPLEFPMNSMSISSWVAL 353
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
PE R*K TVPAE P SFI T NSP RY +L+LKP
Sbjct: 352 SPEVR*KEVTVPAELPSTSFIRTWNSPKRYLALDLKP 242
>gb|CA008408.1|CA008408 HU10N24r HU Hordeum vulgare subsp. vulgare cDNA clone HU10N24
5-PRIME, mRNA sequence
Length = 607
Score = 186 bits (400), Expect = 1e-046
Identities = 73/113 (64%), Positives = 86/113 (76%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF SK +YL+GEF V MKL+ GNSAGTV+ FYL+SG+ DEID+EFMGNSSG P V+
Sbjct: 245 SGFKSKAKYLFGEFQVRMKLVDGNSAGTVTSFYLTSGESATHDEIDIEFMGNSSGDPYVM 424
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRY 606
NTNVWASGDGKKEHQF LWFDPSAD+HTY I WN NI+ + K+Y
Sbjct: 425 NTNVWASGDGKKEHQFYLWFDPSADFHTYKITWNPKNIIFEVDGVPVRTFKKY 583
Score = 120 bits (257), Expect = 6e-027
Identities = 57/97 (58%), Positives = 62/97 (63%)
Frame = -3 / -2
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M F +++*VW SAEGSNQR NWCSFLPSPLA TLVF T G PLE
Sbjct: 537 MFFGFHVIL*VWKSAEGSNQR*NWCSFLPSPLAQTLVFIT*GSPLEFPMNSMSISSWVAL 358
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
PE R*K TVPAE P SFI T NSP RY +L+LKP
Sbjct: 357 SPEVR*KEVTVPAELPSTSFIRTWNSPKRYLALDLKP 247
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
Length = 1110
Score = 186 bits (400), Expect = 1e-046
Identities = 73/113 (64%), Positives = 86/113 (76%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF SK +YL+GEF V MKL+ GNSAGTV+ FYL+SG+ DEID+EFMGNSSG P V+
Sbjct: 218 SGFKSKAKYLFGEFQVRMKLVDGNSAGTVTSFYLTSGESATHDEIDIEFMGNSSGDPYVM 397
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRY 606
NTNVWASGDGKKEHQF LWFDPSAD+HTY I WN NI+ + K+Y
Sbjct: 398 NTNVWASGDGKKEHQFYLWFDPSADFHTYKITWNPKNIIFEVDGVPVRTFKKY 556
Score = 126 bits (269), Expect = 1e-028
Identities = 59/97 (60%), Positives = 64/97 (65%)
Frame = -3 / -1
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M F +++*VW SAEGSNQR NWCSFLPSPLAHTLVF T G PLEL
Sbjct: 510 MFFGFHVIL*VWKSAEGSNQR*NWCSFLPSPLAHTLVFIT*GSPLELPMNSMSISSWVAL 331
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
PE R*K TVPAE P SFI T NSP RY +L+LKP
Sbjct: 330 SPEVR*KEVTVPAELPSTSFIRTWNSPKRYLALDLKP 220
>gb|AV916008.1|AV916008 AV916008 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1b10 5', mRNA sequence
Length = 533
Score = 184 bits (397), Expect = 3e-046
Identities = 71/99 (71%), Positives = 82/99 (82%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF SK +YL+GEF V MKL+ GNSAGTV+ FYL+SG+ DEID+EFMGNSSG P V+
Sbjct: 208 SGFKSKAKYLFGEFQVRMKLVDGNSAGTVTSFYLTSGESATHDEIDIEFMGNSSGDPYVM 387
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
NTNVWASGDGKKEHQF LWFDPSAD+HTY I WN NI+
Sbjct: 388 NTNVWASGDGKKEHQFYLWFDPSADFHTYKITWNPKNII 504
Score = 120 bits (257), Expect = 6e-027
Identities = 57/97 (58%), Positives = 62/97 (63%)
Frame = -3 / -1
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M F +++*VW SAEGSNQR NWCSFLPSPLA TLVF T G PLE
Sbjct: 500 MFFGFHVIL*VWKSAEGSNQR*NWCSFLPSPLAQTLVFIT*GSPLEFPMNSMSISSWVAL 321
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
PE R*K TVPAE P SFI T NSP RY +L+LKP
Sbjct: 320 SPEVR*KEVTVPAELPSTSFIRTWNSPKRYLALDLKP 210
>gb|AV925293.1|AV925293 AV925293 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22j07 5', mRNA sequence
Length = 488
Score = 179 bits (386), Expect = 1e-044
Identities = 72/98 (73%), Positives = 83/98 (84%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 194 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 373
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWF 507
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWF
Sbjct: 374 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWF 487
Score = 115 bits (246), Expect = 2e-025
Identities = 59/105 (56%), Positives = 62/105 (59%)
Frame = -3 / -3
Query: 506 NQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRM 327
NQR NWCSFLPSPLA TLVF T G PL L P+ R*K TVPAE P M
Sbjct: 486 NQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSPSPDVR*KEVTVPAELPPM 307
Query: 326 SFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVP 192
SFI TLNSP*RY SLELKP P WS S T SS+ +P
Sbjct: 306 SFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRTLLP 172
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -2
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 424 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 245
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 244 AVALVERERHLLGDAVVV 191
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 467 APSCRRRWPRRW 432
>gb|BQ460993.1|BQ460993 HE01I24r HE Hordeum vulgare subsp. vulgare cDNA clone HE01I24
5-PRIME, mRNA sequence
Length = 465
Score = 179 bits (386), Expect = 1e-044
Identities = 72/98 (73%), Positives = 83/98 (84%)
Frame = +1 / +3
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGTV+ FYL+SG+GDG
Sbjct: 171 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTVTSFYLTSGEGDGH 350
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWF 507
DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LWF
Sbjct: 351 DEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWF 464
Score = 115 bits (246), Expect = 2e-025
Identities = 59/105 (56%), Positives = 62/105 (59%)
Frame = -3 / -3
Query: 506 NQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER*KHETVPAEFPRM 327
NQR NWCSFLPSPLA TLVF T G PL L P+ R*K TVPAE P M
Sbjct: 463 NQR*NWCSFLPSPLAQTLVFIT*GSPLRLPMNSMSISSWPSPSPDVR*KEVTVPAELPPM 284
Query: 326 SFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTVP 192
SFI TLNSP*RY SLELKP P WS S T SS+ +P
Sbjct: 283 SFIWTLNSP*RYLSLELKPEPPLPWSSVSATCWAMPSSFTRTLLP 149
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = -2 / -2
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A VAHEL VDLV VA+ R+VE DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 401 HVGVAAEVAHELDVDLVMAVALPRRQVEGGDGAGGVAADELHLDAELAVEVLVLGAEAGA 222
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 221 AVALVERERHLLGDAVVV 168
Score = 35.9 bits (72), Expect(2) = 2e-026
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -1 / -1
Query: 487 APSCRRRWPTRW 452
APSCRRRWP RW
Sbjct: 444 APSCRRRWPRRW 409
>gb|BI958669.1|BI958669 HVSMEn0016C05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016C05f, mRNA sequence
Length = 674
Score = 177 bits (382), Expect = 3e-044
Identities = 70/113 (61%), Positives = 83/113 (73%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF K +YL+GE V MKL+ GNSAGTV+ FYL+SG+ DEID+EFMGNSSG P V+
Sbjct: 210 SGFKCKAKYLFGELQVRMKLVNGNSAGTVTSFYLTSGESATHDEIDIEFMGNSSGDPYVM 389
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRY 606
NTNVWASGD KKEHQF LWFDPSAD+HTY I WN NI+ + K+Y
Sbjct: 390 NTNVWASGDCKKEHQFYLWFDPSADFHTYKITWNPKNIIFQVDGVPVRTFKKY 548
Score = 115 bits (246), Expect = 2e-025
Identities = 56/97 (57%), Positives = 60/97 (61%)
Frame = -3 / -2
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M F +++*VW SAEGSNQR NWCSFL SPLA TLVF T G PLE
Sbjct: 502 MFFGFHVIL*VWKSAEGSNQR*NWCSFLQSPLAQTLVFIT*GSPLEFPMNSMSISSWVAL 323
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
PE R*K TVPAE P SFI T NSP RY +L LKP
Sbjct: 322 SPEVR*KEVTVPAELPFTSFIRTCNSPKRYLALHLKP 212
>gb|BF629934.2|BF629934 HVSMEb0007F23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007F23f, mRNA sequence
Length = 499
Score = 177 bits (381), Expect = 5e-044
Identities = 68/93 (73%), Positives = 78/93 (83%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF SK +YL+GEF V MKL+ GNSAGTV+ FYL+SG+ DEID+EFMGNSSG P V+
Sbjct: 220 SGFKSKAKYLFGEFQVRMKLVDGNSAGTVTFFYLTSGESATHDEIDIEFMGNSSGDPYVM 399
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
NTNVWASGDGKKEHQF LWFDPSAD+HTY I W
Sbjct: 400 NTNVWASGDGKKEHQFYLWFDPSADFHTYKITW 498
Score = 116 bits (247), Expect = 1e-025
Identities = 55/91 (60%), Positives = 60/91 (65%)
Frame = -3 / -3
Query: 542 MMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER* 363
+++*VW SAEGSNQR NWCSFLPSPLA TLVF T G PLE PE R*
Sbjct: 494 VIL*VWKSAEGSNQR*NWCSFLPSPLAQTLVFIT*GSPLEFPMNSMSISSWVALSPEVR* 315
Query: 362 KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
K TVPAE P SFI T NSP RY +L+LKP
Sbjct: 314 KKVTVPAELPSTSFIRTWNSPKRYLALDLKP 222
>gb|BI959766.1|BI959766 HVSMEn0021F17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021F17f, mRNA sequence
Length = 634
Score = 105 bits (223), Expect(2) = 6e-044
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = +1 / +2
Query: 376 GDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXT 555
G +I +EFMGN SG P V+NTNVWASGDGKKEH F LWFDP+ HTY I+W+
Sbjct: 350 GRATAMTKIXIEFMGNLSGDPYVMNTNVWASGDGKKEHXFYLWFDPTGHLHTYKIVWDPK 529
Query: 556 NILXXXXDL 582
NI+ DL
Sbjct: 530 NIIFQVDDL 556
Score = 92.3 bits (195), Expect(2) = 6e-044
Identities = 36/53 (67%), Positives = 46/53 (86%)
Frame = +1 / +1
Query: 241 LRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDE 399
+ LDQ +G +GF+SK++YLYGEFSV+MKLI GNSAGT + FYL+SG+GDG DE
Sbjct: 214 ITLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGNSAGTGTSFYLTSGEGDGHDE 372
Score = 71.2 bits (149), Expect(3) = 2e-025
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = -2 / -2
Query: 396 VAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVE 247
V VA+ R+VE GAGGV DELHLDAELAV+VL+LG EAG+A LVE
Sbjct: 369 VMAVALPRRQVEGGPGAGGVAADELHLDAELAVEVLVLGAEAGAAVALVE 220
Score = 58.3 bits (121), Expect(3) = 2e-025
Identities = 29/54 (53%), Positives = 32/54 (59%)
Frame = -3 / -2
Query: 581 RSXXXXRMLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLEL 420
RS M + ++*V GSNQR WCSFLPSPLA TLVF T G PL L
Sbjct: 555 RSSTWNMMFLGSHTIL*VCKWPVGSNQR*XWCSFLPSPLAQTLVFIT*GSPLRL 394
Score = 23.5 bits (45), Expect(3) = 2e-025
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 444 HHRLPARVAHELHVDL 397
H + A VAHEL VDL
Sbjct: 418 HVGVAAEVAHELDVDL 371
>gb|BF256171.2|BF256171 HVSMEf0008P16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008P16f, mRNA sequence
Length = 446
Score = 167 bits (360), Expect = 4e-041
Identities = 68/113 (60%), Positives = 80/113 (70%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF SK +YL+GEF MKL+ GNSAGTV+ FYL+SG+ DEID+EFMGNSSG P V+
Sbjct: 80 SGFKSKAKYLFGEFQARMKLVDGNSAGTVTYFYLTSGESATHDEIDIEFMGNSSGDPYVM 259
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNILXXXXDLFXXXXKRY 606
NT VWASGDGKKEH F LW DPS D HTY I WN NI+ + K+Y
Sbjct: 260 NTIVWASGDGKKEHHFYLW*DPSDDLHTYKITWNPKNIIFDVDRVPVRTFKKY 418
Score = 107 bits (228), Expect = 6e-023
Identities = 52/97 (53%), Positives = 60/97 (61%)
Frame = -3 / -3
Query: 560 MLVXFQMMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXX 381
M F +++*V S+EGS+ R WCSFLPSPLAHT+VF T G PLE
Sbjct: 372 MFFGFHVIL*VCKSSEGSHHR*KWCSFLPSPLAHTMVFIT*GSPLEFPMNSMSISSWVAL 193
Query: 380 XPEER*KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
PE R*K TVPAEFP SFI NSP RY +L+LKP
Sbjct: 192 SPEVR*K*VTVPAEFPSTSFIRAWNSPNRYLALDLKP 82
>gb|BI958667.1|BI958667 HVSMEn0016C03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016C03f, mRNA sequence
Length = 689
Score = 166 bits (358), Expect = 7e-041
Identities = 63/93 (67%), Positives = 74/93 (79%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVL 447
+GF SK +YL+GEF V MKL+ GNSAGTV+ FYL+SG+ DEID+EFMGNSSG P V+
Sbjct: 204 SGFKSKAKYLFGEFQVRMKLVDGNSAGTVTSFYLTSGESATHDEIDIEFMGNSSGDPYVM 383
Query: 448 NTNVWASGDGKKEHQFDLWFDPSADYHTYTIIW 546
NTNVWA GDG+ EHQF LWFDP D+HTY I W
Sbjct: 384 NTNVWARGDGQNEHQFYLWFDPFGDFHTYKITW 482
Score = 106 bits (227), Expect = 8e-023
Identities = 51/91 (56%), Positives = 57/91 (62%)
Frame = -3 / -2
Query: 542 MMV*VW*SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCPLELXXXXXXXXXXXXXXPEER* 363
+++*VW S +GSNQR NWCSF PSP A TLVF T G PLE PE R*
Sbjct: 478 VIL*VWKSPKGSNQR*NWCSFWPSPRAQTLVFIT*GSPLEFPMNSMSISSWVALSPEVR* 299
Query: 362 KHETVPAEFPRMSFISTLNSP*RYCSLELKP 270
K TVPAE P SFI T NSP RY +L+LKP
Sbjct: 298 KEVTVPAELPSTSFIRTWNSPKRYLALDLKP 206
>gb|BI959504.1|BI959504 HVSMEn0019O24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019O24f, mRNA sequence
Length = 672
Score = 162 bits (349), Expect = 1e-039
Identities = 61/91 (67%), Positives = 71/91 (78%)
Frame = +1 / +2
Query: 334 GNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDP 513
GNSAG V CFYL+SG+GDG DEID+EFMGN SG P V+NTNVWASGDGKKEHQF LW DP
Sbjct: 5 GNSAGAVGCFYLTSGEGDGHDEIDIEFMGNLSGDPYVMNTNVWASGDGKKEHQFYLWVDP 184
Query: 514 SADYHTYTIIWNXTNILXXXXDLFXXXXKRY 606
+AD+HTY I+WN NI+ D+ K+Y
Sbjct: 185 TADFHTYKIVWNPKNIIFQVDDVPVRTFKKY 277
>gb|BF622057.1|BF622057 HVSMEa0001K09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001K09f, mRNA sequence
Length = 606
Score = 162 bits (348), Expect = 2e-039
Identities = 64/92 (69%), Positives = 72/92 (78%)
Frame = +1 / +2
Query: 334 GNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDP 513
GNSAGTV+ FYLS G+ G DEIDMEFMGNS+GQPV LNTNVWA+GDGKKE QF LWFDP
Sbjct: 2 GNSAGTVASFYLSFGNEPGHDEIDMEFMGNSTGQPVALNTNVWANGDGKKEQQFYLWFDP 181
Query: 514 SADYHTYTIIWNXTNILXXXXDLFXXXXKRYA 609
+A YHTYTIIWN N++ DLF R+A
Sbjct: 182 AAGYHTYTIIWNDRNVIFKVDDLFLRCFTRHA 277
>gb|BI956298.1|BI956298 HVSMEn0002B22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0002B22f, mRNA sequence
Length = 842
Score = 134 bits (288), Expect(2) = 8e-038
Identities = 50/87 (57%), Positives = 63/87 (72%)
Frame = +1 / +1
Query: 346 GTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADY 525
GTV+ YL+SG+GD D+ID+E MGN G P V+NTNVWA+GDGKKE QF LWFDP+ D+
Sbjct: 322 GTVT*LYLTSGEGDSHDQIDIELMGNLRGDPYVMNTNVWATGDGKKERQFYLWFDPTGDF 501
Query: 526 HTYTIIWNXTNILXXXXDLFXXXXKRY 606
HTY I+WN NI+ D+ K+Y
Sbjct: 502 HTYKIVWNPKNIIFQVDDVPVRTLKKY 582
Score = 41.8 bits (85), Expect(2) = 8e-038
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 229 QVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
Q V LD G G+ ++ YLY EF+V M LI GNSA
Sbjct: 204 QHVARTLDHGIGGYGYTYRDAYLYREFTVHMSLIGGNSA 320
>gb|BF618271.2|BF618271 HVSMEc0005D16f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0005D16f, mRNA sequence
Length = 590
Score = 155 bits (333), Expect = 2e-037
Identities = 61/100 (61%), Positives = 75/100 (75%)
Frame = +1 / +1
Query: 265 AAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVV 444
++GF SK + L+GEF V MKL+ GNSAGTV+ YLS G+ DEID+EF+GNSSG+P V
Sbjct: 244 SSGFKSKAKCLFGEFQVRMKLVDGNSAGTVT*LYLSCGESATHDEIDIEFVGNSSGEPYV 423
Query: 445 LNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNIL 564
+NTNVWASGD KK+HQ LW DP D+HTY I W NI+
Sbjct: 424 MNTNVWASGDRKKDHQIYLWVDPCVDFHTYVIRWGP*NII 543
>gb|AL504934.1|AL504934 AL504934 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06N22V 5', mRNA sequence
Length = 556
Score = 155 bits (332), Expect = 3e-037
Identities = 62/74 (83%), Positives = 68/74 (91%)
Frame = +1 / +1
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSA 345
WLD+RF TDGTVRTGYD SGQQVVML L+Q SGAAGFNSK+QYLYGEFS++MKLI GNSA
Sbjct: 280 WLDKRFNTDGTVRTGYDASGQQVVMLNLNQQSGAAGFNSKQQYLYGEFSIQMKLIPGNSA 459
Query: 346 GTVSCFYLSSGDGD 387
GTVSCFYLSSGD +
Sbjct: 460 GTVSCFYLSSGDDE 501
Score = 146 bits (313), Expect = 1e-034
Identities = 60/71 (84%), Positives = 63/71 (88%)
Frame = -3 / -3
Query: 374 EER*KHETVPAEFPRMSFISTLNSP*RYCSLELKPAAPECWSRRSITTCWPESSYPVRTV 195
EER*K ETVPAEFP MSFI LNSP*RYC LELKPAAP+CW R SITTCWPE+SYPVRTV
Sbjct: 488 EER*KQETVPAEFPGMSFIWMLNSP*RYCCLELKPAAPDCWLRLSITTCWPEASYPVRTV 309
Query: 194 PSVVNLLSSHD 162
PSV+NLLSS D
Sbjct: 308 PSVLNLLSSQD 276
Score = 130 bits (279), Expect = 6e-030
Identities = 57/72 (79%), Positives = 62/72 (86%)
Frame = -2 / -2
Query: 381 VAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSAGVLVEAEHHHLLARIVVSRA 202
V GR+VEA DGA GVP DELHLDAEL ++VLLLGVEAG AG+LVE EHHHLLAR VVSRA
Sbjct: 495 VTGRKVEAGDGASGVPRDELHLDAELTIEVLLLGVEAGGAGLLVEVEHHHLLARGVVSRA 316
Query: 201 DGAVRGEPPVKP 166
DGAVR EP V+P
Sbjct: 315 DGAVRVEPLVEP 280
>gb|BG309526.2|BG309526 HVSMEc0010M24f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0010M24f, mRNA sequence
Length = 807
Score = 154 bits (330), Expect = 5e-037
Identities = 60/85 (70%), Positives = 72/85 (84%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQP 438
+G +GF+SK++YLYGEFSV+MKLI GNS GTV+CFYL+SG+GDG D ID+E MGN SG P
Sbjct: 215 NGGSGFSSKDKYLYGEFSVQMKLIGGNSGGTVTCFYLTSGEGDGHD*IDIEVMGNLSGDP 394
Query: 439 VVLNTNVWASGDGKKEHQFDLWFDP 513
V +NTNVWASG+G KEHQF LW P
Sbjct: 395 VRMNTNVWASGEGIKEHQFYLWVCP 469
Score = 85.4 bits (180), Expect(2) = 2e-027
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = -2 / -3
Query: 429 ARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGSA 262
A+VAH+L VDLV VA+ R+VEA GA GVP DELHLDAEL V+VL+LG EAG+A
Sbjct: 385 AQVAHDLDVDLVMAVALPRRQVEAGHGAAGVPADELHLDAELPVEVLVLGAEAGAA 218
Score = 56.5 bits (117), Expect(2) = 2e-027
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 512 GSNQRSNWCSFLPSPLAHTLVFSTTGCPLEL 420
G QR NWCSF+PSPLA TLVF TG PL L
Sbjct: 468 GQTQR*NWCSFIPSPLAQTLVFIRTGSPLRL 376
>gb|BF627429.2|BF627429 HVSMEb0004N10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004N10f, mRNA sequence
Length = 793
Score = 151 bits (325), Expect = 3e-036
Identities = 64/102 (62%), Positives = 78/102 (76%)
Frame = +1 / +2
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +GF+SK++YLYGEFSV+MKLI G+SAGTV+CFYL+SG+GDGR
Sbjct: 188 DDGIAQQVALTLDQGNGGSGFSSKDKYLYGEFSVQMKLIGGDSAGTVTCFYLTSGEGDGR 367
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSA 519
DEID+E MG G P V+NT VWA DG E F LW+ P+A
Sbjct: 368 DEIDVECMGGLFGDPCVMNTVVWAIVDGG*ERLFCLWWCPAA 493
Score = 98.7 bits (209), Expect(2) = 1e-021
Identities = 47/78 (60%), Positives = 54/78 (69%)
Frame = -2 / -1
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + AH L VDLV VA+ R+VEA DGAGGV DELHLDAELAV+VL+LG EAG+
Sbjct: 418 HAGVAEEAAHALDVDLVTAVALPRRQVEAGDGAGGVAADELHLDAELAVEVLVLGAEAGA 239
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 238 AVALVERERHLLGDAVVV 185
Score = 24.0 bits (46), Expect(2) = 1e-021
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 487 APSCRRRWPTR 455
AP+ RRRWP R
Sbjct: 461 APTRRRRWPRR 429
>gb|BF267606.1|BF267606 HV_CEa0018G10f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018G10f, mRNA sequence
Length = 531
Score = 103 bits (220), Expect(2) = 3e-034
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = +1 / +2
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SGQP ++TNV++ G G +E QF +WFDP+ D+HTY+++WN
Sbjct: 212 SSQGSAHDEIDFEFLGNASGQPYTVHTNVYSQGKGGREQQFRMWFDPTVDFHTYSVLWNP 391
Query: 553 TNIL 564
T+IL
Sbjct: 392 THIL 403
Score = 61.1 bits (127), Expect(2) = 3e-034
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+ +GF SK QYLYG F +++KL+ G+SAGTV+ FYLSS
Sbjct: 101 ASGSGFQSKNQYLYGRFDMQIKLVPGDSAGTVATFYLSS 217
>gb|CA019178.1|CA019178 HV11B18r HV Hordeum vulgare subsp. vulgare cDNA clone HV11B18
5-PRIME, mRNA sequence
Length = 532
Score = 101 bits (216), Expect(2) = 1e-033
Identities = 35/64 (54%), Positives = 49/64 (76%)
Frame = +1 / +1
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+S QP ++TNV++ G G +E QF +WFDP+AD+HTY+++WN
Sbjct: 337 SSQGSAHDEIDFEFLGNASEQPYTVHTNVYSQGKGGREQQFRMWFDPTADFHTYSVLWNP 516
Query: 553 TNIL 564
T+IL
Sbjct: 517 THIL 528
Score = 61.1 bits (127), Expect(2) = 1e-033
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +1 / +1
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+ +GF SK QYLYG F +++KL+ G+SAGTV+ FYLSS
Sbjct: 226 ASGSGFQSKNQYLYGRFDMQIKLVPGDSAGTVATFYLSS 342
>gb|BF254604.1|BF254604 HVSMEf0004H21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004H21f, mRNA sequence
Length = 911
Score = 141 bits (302), Expect = 4e-033
Identities = 59/104 (56%), Positives = 76/104 (73%)
Frame = +1 / +1
Query: 214 DDSGQQVVMLRLDQHSGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGR 393
DD Q V L LDQ +G +G +SK++YLYGEFSV+MKLI GN AGTV+ YL+ G+GDG
Sbjct: 202 DDGIAQQVALTLDQGNGGSGLSSKDKYLYGEFSVQMKLIGGNYAGTVTYLYLTYGEGDGH 381
Query: 394 DEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADY 525
DEID+E +G+ G P V+NT+VWA+GD KEHQ L +D D+
Sbjct: 382 DEIDVELVGDLGGDPCVMNTSVWANGDW*KEHQGLLGWDAGGDW 513
Score = 88.6 bits (187), Expect(2) = 3e-026
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = -2 / -3
Query: 444 HHRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
H + A+VAH+LHVDLV VA+ R+V+ GAG V DELHL AELAV+VL+LG AG+
Sbjct: 432 HAGVAAQVAHQLHVDLVMAVALPIRQVQVGYGAGVVAADELHLHAELAVQVLVLGA*AGA 253
Query: 264 AGVLVEAEHHHLLARIVV 211
A LVE E H L +VV
Sbjct: 252 AVALVERERHLLGDAVVV 199
Score = 49.2 bits (101), Expect(2) = 3e-026
Identities = 20/31 (64%), Positives = 21/31 (67%)
Frame = -3 / -1
Query: 521 SAEGSNQRSNWCSFLPSPLAHTLVFSTTGCP 429
S S+ RS WCSF SPLAHTLVF T G P
Sbjct: 509 SPPASHPRSPWCSFYQSPLAHTLVFITQGSP 417
>gb|BI958113.1|BI958113 HVSMEn0013H08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013H08f, mRNA sequence
Length = 883
Score = 104 bits (222), Expect(3) = 6e-033
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = +1 / +2
Query: 274 FNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGDGDGRDEIDMEFMGNSSGQPVVLN 450
F S+ YLYG+FSV+MKL+ GNSAGT +CFYLSSG+ G DEIDM FMGNS+GQPV L+
Sbjct: 269 FRSRRSYLYGQFSVQMKLVPGNSAGTGACFYLSSGNEPGHDEIDMXFMGNSTGQPVALS 445
Score = 84.0 bits (177), Expect(3) = 7e-026
Identities = 39/59 (66%), Positives = 42/59 (71%)
Frame = -2 / -1
Query: 441 HRLPARVAHELHVDLVAPVAVAGREVEARDGAGGVPPDELHLDAELAVKVLLLGVEAGS 265
HRL VAHELHVDLV P VA R+VEA GAGGV DELHLDAELAV+V G E +
Sbjct: 436 HRLARAVAHELHVDLVVPRLVARRQVEAGAGAGGVAGDELHLDAELAVEVAAPGPEGAA 260
Score = 43.7 bits (89), Expect(3) = 6e-033
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / +2
Query: 166 WLDRRFTTDGTVRTGYDDSGQQVVMLRLDQHSGAA 270
WL F T+G VR GY G+QV + LD+ SG A
Sbjct: 164 WLHEEFETEGNVRAGYXARGRQVASIVLDRQSGGA 268
Score = 40.5 bits (82), Expect(3) = 7e-026
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -3 / -2
Query: 275 KPAAPECWSRRSITTCWPESSYPVRTVPSVVNLLSSH 165
+ A P+C SR TC P + P RT+PSV N SH
Sbjct: 273 RKAPPDCRSRTMDATCRPRAX*PARTLPSVSNSSCSH 163
Score = 29.9 bits (59), Expect(3) = 6e-033
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 466 SGDGKKEHQFDLWFDPSA 519
+GDGKKE + LW +P+A
Sbjct: 459 NGDGKKEQRLWLWVEPAA 512
Score = 29.9 bits (59), Expect(3) = 7e-026
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -3 / -1
Query: 518 AEGSNQRSNWCSFLPSPL 465
A GS N CSFLPSPL
Sbjct: 511 AAGSTHSHNRCSFLPSPL 458
>gb|BE216242.1|BE216242 HV_CEb0009P07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009P07f, mRNA sequence
Length = 573
Score = 98.7 bits (209), Expect(2) = 1e-032
Identities = 34/64 (53%), Positives = 48/64 (75%)
Frame = +1 / +2
Query: 373 SGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNX 552
S G DEID EF+GN+SGQP ++TNV++ G G +E QF +WFDP+ D+HT +++WN
Sbjct: 344 SSQGSAHDEIDFEFLGNASGQPYTVHTNVYSQGKGGREQQFRMWFDPTGDFHT*SVLWNP 523
Query: 553 TNIL 564
T+IL
Sbjct: 524 THIL 535
Score = 61.1 bits (127), Expect(2) = 1e-032
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +1 / +2
Query: 259 SGAAGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+ +GF SK QYLYG F +++KL+ G+SAGTV+ FYLSS
Sbjct: 233 ASGSGFQSKNQYLYGRFDMQIKLVPGDSAGTVATFYLSS 349
>gb|BG368127.1|BG368127 HVSMEi0015M23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0015M23f, mRNA sequence
Length = 786
Score = 98.2 bits (208), Expect(2) = 2e-032
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = +1 / +3
Query: 382 GDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTIIWNXTNI 561
GDG DEID EF+GN SG+P ++ TNV+A G G +E + LWFDP+ D+H YTI+WN NI
Sbjct: 366 GDGHDEIDFEFLGNVSGEPYLMQTNVFAQGVGGREQRSYLWFDPTEDFHNYTILWNPLNI 545
Query: 562 L 564
+
Sbjct: 546 I 548
Score = 60.2 bits (125), Expect(2) = 2e-032
Identities = 22/38 (57%), Positives = 33/38 (86%)
Frame = +1 / +3
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSSGD 381
+GF S++ +L+GEF++EMKL+ G+SAGTV+ FYL+S D
Sbjct: 240 SGFQSRDAFLFGEFTMEMKLVPGDSAGTVTTFYLTSKD 353
>gb|BQ759958.1|BQ759958 EBpi05_SQ004_P23_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_P23 5', mRNA sequence
Length = 537
Score = 101 bits (215), Expect(2) = 2e-032
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1 / +2
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G DEID EF+GN +G+P L+TNV+ G G++E QF LWFDP+ D+HTY+I+
Sbjct: 311 YYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTNDFHTYSIL 490
Query: 544 WNXTNILXXXXDL 582
WN +I+ D+
Sbjct: 491 WNPKHIIFMADDM 529
Score = 57.0 bits (118), Expect(2) = 2e-032
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +1 / +2
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF SK +YL+G+ +++KL+ GNSAGTV+ +YLSS
Sbjct: 218 SGFQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSS 325
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
(XEA)
Length = 1174
Score = 100 bits (214), Expect(2) = 3e-032
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1 / +1
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G DEID EF+GN +G+P L+TNV+ G G++E QF LWFDP+ D+HTY+I+
Sbjct: 304 YYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTNDFHTYSIL 483
Query: 544 WNXTNILXXXXDL 582
WN +I+ D+
Sbjct: 484 WNPKHIIFMVDDM 522
Score = 57.0 bits (118), Expect(2) = 3e-032
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF SK +YL+G+ +++KL+ GNSAGTV+ +YLSS
Sbjct: 211 SGFQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSS 318
>gb|BG300583.1|BG300583 HVSMEb0017J11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017J11f, mRNA sequence
Length = 876
Score = 100 bits (214), Expect(2) = 3e-032
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1 / +1
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G DEID EF+GN +G+P L+TNV+ G G++E QF LWFDP+ D+HTY+I+
Sbjct: 298 YYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTNDFHTYSIL 477
Query: 544 WNXTNILXXXXDL 582
WN +I+ D+
Sbjct: 478 WNPKHIIFMVDDM 516
Score = 57.0 bits (118), Expect(2) = 3e-032
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF SK +YL+G+ +++KL+ GNSAGTV+ +YLSS
Sbjct: 205 SGFQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSS 312
>gb|BF626739.2|BF626739 HVSMEb0001D16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0001D16f, mRNA sequence
Length = 844
Score = 100 bits (214), Expect(2) = 3e-032
Identities = 36/73 (49%), Positives = 50/73 (68%)
Frame = +1 / +1
Query: 364 YLSSGDGDGRDEIDMEFMGNSSGQPVVLNTNVWASGDGKKEHQFDLWFDPSADYHTYTII 543
Y S G DEID EF+GN +G+P L+TNV+ G G++E QF LWFDP+ D+HTY+I+
Sbjct: 310 YYLSSQGPTHDEIDFEFLGNVTGEPYTLHTNVFTQGQGQREQQFRLWFDPTNDFHTYSIL 489
Query: 544 WNXTNILXXXXDL 582
WN +I+ D+
Sbjct: 490 WNPKHIIFMVDDM 528
Score = 57.0 bits (118), Expect(2) = 3e-032
Identities = 20/36 (55%), Positives = 30/36 (83%)
Frame = +1 / +1
Query: 268 AGFNSKEQYLYGEFSVEMKLIRGNSAGTVSCFYLSS 375
+GF SK +YL+G+ +++KL+ GNSAGTV+ +YLSS
Sbjct: 217 SGFQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSS 324
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 230,368,827
Number of Sequences: 312970
Number of extensions: 3293010
Number of successful extensions: 88302
Number of sequences better than 1.0e-020: 171
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6404923059
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)