TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAS2h09.yg.3.5
(1992 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedl... 271 7e-072
emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA 266 3e-070
gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachi... 265 5e-070
gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. v... 265 5e-070
gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedl... 243 4e-068
gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, sal... 255 5e-067
gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike... 251 1e-065
gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. v... 249 3e-065
emb|X70881.1|HVMYB3G H.vulgare myb3 gene 167 1e-064
gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedl... 233 2e-060
gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedl... 233 3e-060
gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedl... 233 3e-060
gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedl... 230 3e-059
emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA 230 3e-059
gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. v... 223 2e-057
gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedl... 222 6e-057
gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedl... 221 1e-056
gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachi... 221 1e-056
emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA 221 1e-056
gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedl... 217 1e-055
gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachi... 215 7e-055
gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcrip... 213 3e-054
gb|BJ462569.1|BJ462569 BJ462569 K. Sato unpublished cDNA li... 122 1e-053
gb|BF624687.2|BF624687 HVSMEa0017H14f Hordeum vulgare seedl... 122 3e-052
gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-a... 206 4e-052
gb|BF618630.2|BF618630 HVSMEc0006O07f Hordeum vulgare seedl... 171 6e-052
gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedl... 205 7e-052
gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedl... 205 7e-052
gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedl... 205 7e-052
gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, sal... 205 7e-052
gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, sal... 205 7e-052
gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, wat... 205 7e-052
gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. v... 205 7e-052
gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare s... 204 2e-051
emb|X70879.1|HVMYB1G H.vulgare Myb1 gene 153 2e-050
gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hyd... 199 5e-050
gb|CV058923.1|CV058923 BNEL42e10 Barley EST endosperm libra... 199 6e-050
gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. v... 198 9e-050
gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. v... 198 9e-050
gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, sal... 197 2e-049
gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgar... 196 4e-049
gb|CV056415.1|CV056415 BNEL17E10 Barley EST endosperm libra... 195 6e-049
gb|CV056818.1|CV056818 BNEL20h7 Barley EST endosperm librar... 195 6e-049
gb|CV058774.1|CV058774 BNEL40g12 Barley EST endosperm libra... 195 6e-049
gb|CV058910.1|CV058910 BNEL42d1 Barley EST endosperm librar... 195 6e-049
gb|CV062377.1|CV062377 BNEL79d11 Barley EST endosperm libra... 195 6e-049
gb|CV063729.1|CV063729 BNEL92e6 Barley EST endosperm librar... 195 6e-049
gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedl... 116 1e-048
gb|CV062831.1|CV062831 BNEL83e5 Barley EST endosperm librar... 193 4e-048
gb|BJ467643.1|BJ467643 BJ467643 K. Sato unpublished cDNA li... 110 8e-048
gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. v... 191 1e-047
gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedl... 190 3e-047
gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm libra... 179 5e-044
gb|BQ471469.1|BQ471469 HV02I08r HV Hordeum vulgare subsp. v... 117 7e-044
gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA li... 177 2e-043
gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachi... 176 5e-043
gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachi... 170 3e-041
emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcriptio... 170 3e-041
gb|AL507585.1|AL507585 AL507585 Hordeum vulgare Barke devel... 169 4e-041
gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. v... 167 1e-040
gb|CV063055.1|CV063055 BNEL86b3 Barley EST endosperm librar... 167 2e-040
gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. v... 166 3e-040
gb|CA014662.1|CA014662 HT11P22r HT Hordeum vulgare subsp. v... 166 3e-040
gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. v... 166 3e-040
emb|X87690.1|HVRNAGAM1 H.vulgare mRNA for GAMyb protein 166 3e-040
gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. v... 166 4e-040
emb|X70880.1|HVMYB2G H.vulgare Myb2 gene 151 4e-040
gb|CA019195.1|CA019195 HV11C18r HV Hordeum vulgare subsp. v... 166 5e-040
gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DA... 164 1e-039
gb|CA019900.1|CA019900 HV13K14r HV Hordeum vulgare subsp. v... 162 7e-039
gb|BQ764651.1|BQ764651 EBca01_SQ004_C14_R carpel, pre-anthe... 155 8e-037
gb|BI956816.1|BI956816 HVSMEn0005H11f Hordeum vulgare rachi... 155 1e-036
gb|BQ753632.1|BQ753632 EBan01_SQ004_M23_R anther, yellow st... 154 1e-036
gb|CA027463.1|CA027463 HZ59A03r HZ Hordeum vulgare subsp. v... 154 1e-036
gb|BF619532.3|BF619532 HVSMEc0003P10f Hordeum vulgare seedl... 132 2e-036
gb|CA003603.1|CA003603 HS14P22r HS Hordeum vulgare subsp. v... 152 5e-036
gb|BQ460434.1|BQ460434 HA09K10r HA Hordeum vulgare subsp. v... 150 2e-035
gb|BM371860.2|BM371860 EBma08_SQ004_D12_R maternal, 28 DPA,... 150 2e-035
gb|BQ466900.1|BQ466900 HS01O24T HS Hordeum vulgare subsp. v... 150 3e-035
gb|BU975173.1|BU975173 HB30F02r BC Hordeum vulgare subsp. v... 149 7e-035
gb|BF626054.2|BF626054 HVSMEa0015H17f Hordeum vulgare seedl... 147 2e-034
gb|BU975705.1|BU975705 HB32A20r BC Hordeum vulgare subsp. v... 147 2e-034
gb|AV920069.1|AV920069 AV920069 K. Sato unpublished cDNA li... 102 2e-034
gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (... 128 3e-034
gb|AL507948.1|AL507948 AL507948 Hordeum vulgare Barke devel... 144 2e-033
gb|BI779364.2|BI779364 EBro01_SQ003_M18_R root, 3 week, hyd... 122 7e-030
gb|BQ765682.1|BQ765682 EBro03_SQ007_I24_R root, 3 week, wat... 127 3e-028
gb|CK123590.1|CK123590 BES1824104i24 BES1824 Hordeum vulgar... 127 3e-028
gb|AV933832.1|AV933832 AV933832 K. Sato unpublished cDNA li... 124 1e-027
gb|BI954784.1|BI954784 HVSMEm0019M04f Hordeum vulgare green... 124 2e-027
gb|BM443593.2|BM443593 EBro02_SQ005_M21_R root, 3 week, hyd... 123 3e-027
gb|AL507750.1|AL507750 AL507750 Hordeum vulgare Barke devel... 103 8e-027
gb|BQ756020.1|BQ756020 EBem05_SQ001_E11_R embryo, 14 DPA, n... 103 8e-027
gb|BG369102.2|BG369102 HVSMEi0021L15f Hordeum vulgare 20 DA... 120 3e-026
gb|AV932650.1|AV932650 AV932650 K. Sato unpublished cDNA li... 118 9e-026
gb|BF625715.2|BF625715 HVSMEa0013F16f Hordeum vulgare seedl... 68 7e-025
gb|BG343954.1|BG343954 HVSMEg0007D14f Hordeum vulgare pre-a... 114 1e-024
gb|CK124462.1|CK124462 BES1824109d16 BES1824 Hordeum vulgar... 101 2e-024
gb|CK124499.1|CK124499 BES1824109g02 BES1824 Hordeum vulgar... 101 2e-024
gb|BG368576.2|BG368576 HVSMEi0019M02f Hordeum vulgare 20 DA... 111 1e-023
gb|AF189788.1|AF189788 Hordeum vulgare putative c-myb-like ... 96 3e-023
gb|CA008589.1|CA008589 HU11H04r HU Hordeum vulgare subsp. v... 109 7e-023
gb|BI960298.1|BI960298 HVSMEn0024C09f Hordeum vulgare rachi... 107 2e-022
gb|CV063142.1|CV063142 BNEL87b1 Barley EST endosperm librar... 93 4e-022
gb|CV063485.1|CV063485 BNEL8H1 Barley EST endosperm library... 93 4e-022
gb|CV059557.1|CV059557 BNEL49d7 Barley EST endosperm librar... 93 4e-022
gb|CV057037.1|CV057037 BNEL23d1 Barley EST endosperm librar... 93 6e-022
gb|BF627413.1|BF627413 HVSMEb0004M17f Hordeum vulgare seedl... 103 4e-021
gb|BJ471839.1|BJ471839 BJ471839 K. Sato unpublished cDNA li... 89 2e-020
gb|BE455245.2|BE455245 HVSMEh0096L16f Hordeum vulgare 5-45 ... 84 7e-020
gb|BU998160.1|BU998160 HI10C21r HI Hordeum vulgare subsp. v... 79 9e-020
gb|BI957930.1|BI957930 HVSMEn0012D18f Hordeum vulgare rachi... 96 5e-019
gb|BF629773.1|BF629773 HVSMEb0013M11f Hordeum vulgare seedl... 96 7e-019
gb|CV053601.1|CV053601 BNEL101a9 Barley EST endosperm libra... 95 9e-019
gb|BG343686.1|BG343686 HVSMEg0006D17f Hordeum vulgare pre-a... 85 7e-018
gb|BG343689.1|BG343689 HVSMEg0006D21f Hordeum vulgare pre-a... 85 7e-018
gb|BF617675.2|BF617675 HVSMEc0018K06f Hordeum vulgare seedl... 85 7e-018
gb|BQ470201.1|BQ470201 HX02B17r HX Hordeum vulgare subsp. v... 85 7e-018
gb|BU997080.1|BU997080 HI06N15r HI Hordeum vulgare subsp. v... 85 7e-018
gb|BF262578.2|BF262578 HV_CEa0004G02f Hordeum vulgare seedl... 91 2e-017
gb|BE519986.1|BE519986 HV_CEb0021P13f Hordeum vulgare seedl... 81 5e-017
gb|AJ434757.1|AJ434757 AJ434757 S00002 Hordeum vulgare subs... 57 1e-015
gb|BG344708.2|BG344708 HVSMEg0015E16f Hordeum vulgare pre-a... 84 2e-015
gb|BQ472089.1|BQ472089 HV04G01r HV Hordeum vulgare subsp. v... 66 3e-015
gb|BG415047.2|BG415047 HVSMEk0004N16f Hordeum vulgare testa... 66 9e-015
gb|BM101125.2|BM101125 EBpi01_SQ002_P05_R pistil, 1 DPA, no... 64 1e-013
gb|BG416961.1|BG416961 HVSMEk0015G09f Hordeum vulgare testa... 74 3e-012
gb|BJ472224.1|BJ472224 BJ472224 K. Sato unpublished cDNA li... 73 4e-012
gb|BF255712.3|BF255712 HVSMEf0007J14f Hordeum vulgare seedl... 46 4e-011
gb|AF189787.1|AF189787 Hordeum vulgare putative c-myb-like ... 54 4e-011
gb|BM442518.2|BM442518 EBan01_SQ003_G12_R anther, yellow st... 66 9e-010
gb|BG415768.1|BG415768 HVSMEk0007M02f Hordeum vulgare testa... 57 5e-007
gb|BF617445.3|BF617445 HVSMEc0017G08f Hordeum vulgare seedl... 56 7e-007
gb|AV909344.1|AV909344 AV909344 K. Sato unpublished cDNA li... 56 7e-007
gb|AV911235.1|AV911235 AV911235 K. Sato unpublished cDNA li... 56 7e-007
gb|AV922828.1|AV922828 AV922828 K. Sato unpublished cDNA li... 56 7e-007
gb|AV922837.1|AV922837 AV922837 K. Sato unpublished cDNA li... 56 7e-007
gb|AV924475.1|AV924475 AV924475 K. Sato unpublished cDNA li... 56 7e-007
gb|AV924476.1|AV924476 AV924476 K. Sato unpublished cDNA li... 56 7e-007
gb|AV927549.1|AV927549 AV927549 K. Sato unpublished cDNA li... 56 7e-007
gb|AV927559.1|AV927559 AV927559 K. Sato unpublished cDNA li... 56 7e-007
gb|AV929566.1|AV929566 AV929566 K. Sato unpublished cDNA li... 56 7e-007
gb|AV932316.1|AV932316 AV932316 K. Sato unpublished cDNA li... 56 7e-007
gb|AV935165.1|AV935165 AV935165 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ447171.1|BJ447171 BJ447171 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ454672.1|BJ454672 BJ454672 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ469328.1|BJ469328 BJ469328 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ470047.1|BJ470047 BJ470047 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ471394.1|BJ471394 BJ471394 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ472498.1|BJ472498 BJ472498 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ472717.1|BJ472717 BJ472717 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ473521.1|BJ473521 BJ473521 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ474001.1|BJ474001 BJ474001 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ474636.1|BJ474636 BJ474636 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ476463.1|BJ476463 BJ476463 K. Sato unpublished cDNA li... 56 7e-007
gb|BJ476673.1|BJ476673 BJ476673 K. Sato unpublished cDNA li... 56 7e-007
gb|BU994484.1|BU994484 HM07D17r HM Hordeum vulgare subsp. v... 56 7e-007
gb|BF630934.2|BF630934 HVSMEb0014H13f Hordeum vulgare seedl... 56 9e-007
gb|BI956991.1|BI956991 HVSMEn0006L18f Hordeum vulgare rachi... 55 2e-006
gb|BI953245.1|BI953245 HVSMEm0011N11f Hordeum vulgare green... 54 2e-006
gb|CV059811.1|CV059811 BNEL51c10 Barley EST endosperm libra... 40 4e-006
gb|BF616485.2|BF616485 HVSMEc0010B15f Hordeum vulgare seedl... 40 7e-006
gb|BF254573.2|BF254573 HVSMEf0004G11f Hordeum vulgare seedl... 51 2e-005
gb|BQ767987.1|BQ767987 EBro08_SQ010_K07_R root, 3 week, dro... 51 2e-005
gb|CA011819.1|CA011819 HT03K05r HT Hordeum vulgare subsp. v... 47 3e-004
gb|BQ768047.1|BQ768047 EBro08_SQ010_E18_R root, 3 week, dro... 46 0.001
gb|CA006699.1|CA006699 HU05H10r HU Hordeum vulgare subsp. v... 46 0.001
gb|CA007589.1|CA007589 HU08G21r HU Hordeum vulgare subsp. v... 34 0.001
gb|CB880014.1|CB880014 HM05D17w HM Hordeum vulgare subsp. v... 43 0.007
gb|BJ463972.1|BJ463972 BJ463972 K. Sato unpublished cDNA li... 42 0.013
gb|BU970342.1|BU970342 HB14F18r BC Hordeum vulgare subsp. v... 31 0.014
gb|BI952922.1|BI952922 HVSMEm0008H03f Hordeum vulgare green... 31 0.45
gb|BF262471.2|BF262471 HV_CEa0004A18f Hordeum vulgare seedl... 27 0.50
gb|BG369497.1|BG369497 HVSMEi0024K11f Hordeum vulgare 20 DA... 28 0.68
gb|BI960454.1|BI960454 HVSMEn0024K11f Hordeum vulgare rachi... 30 1.2
gb|BG369799.1|BG369799 HVSMEi0026B10f Hordeum vulgare 20 DA... 35 1.5
gb|BG367208.2|BG367208 HVSMEi0011F02f Hordeum vulgare 20 DA... 35 1.5
gb|BG369679.2|BG369679 HVSMEi0025H12f Hordeum vulgare 20 DA... 35 1.5
gb|BM442949.2|BM442949 EBro02_SQ002_A04_R root, 3 week, hyd... 35 1.5
gb|BQ763613.1|BQ763613 EBro02_SQ008_N22_R root, 3 week, hyd... 35 1.5
gb|BQ764255.1|BQ764255 EBan01_SQ005_G10_R anther, yellow st... 35 1.5
gb|BU994848.1|BU994848 HM08G09r HM Hordeum vulgare subsp. v... 35 1.5
gb|CA032394.1|CA032394 HX12O13r HX Hordeum vulgare subsp. v... 35 1.5
gb|BF259054.2|BF259054 HVSMEf0017I14f Hordeum vulgare seedl... 30 1.7
gb|BE602473.2|BE602473 HVSMEh0099B10f Hordeum vulgare 5-45 ... 35 2.1
gb|BI947849.1|BI947849 HVSMEl0007D02f Hordeum vulgare spike... 35 2.1
gb|BG366008.2|BG366008 HVSMEi0004M21f Hordeum vulgare 20 DA... 35 2.1
gb|BG369593.2|BG369593 HVSMEi0025C01f Hordeum vulgare 20 DA... 35 2.1
gb|BM099949.2|BM099949 EBes01_SQ004_L19_R embryo sac, 4-6 D... 35 2.1
gb|BQ768242.1|BQ768242 EBro08_SQ011_L02_R root, 3 week, dro... 35 2.1
gb|BU997102.1|BU997102 HI06O17r HI Hordeum vulgare subsp. v... 35 2.1
gb|BU997979.1|BU997979 HI09J14r HI Hordeum vulgare subsp. v... 35 2.1
gb|BU998579.1|BU998579 HI11I02r HI Hordeum vulgare subsp. v... 35 2.1
gb|CA032005.1|CA032005 HX11L19r HX Hordeum vulgare subsp. v... 35 2.1
gb|CV058397.1|CV058397 BNEL37f11 Barley EST endosperm libra... 35 2.1
gb|BG366605.1|BG366605 HVSMEi0007J17f Hordeum vulgare 20 DA... 27 2.3
gb|BQ467955.1|BQ467955 HR01H09r HR Hordeum vulgare subsp. v... 34 2.8
gb|BU975460.1|BU975460 HB31D06r BC Hordeum vulgare subsp. v... 34 2.8
gb|BI950484.1|BI950484 HVSMEl0020O13f Hordeum vulgare spike... 30 2.9
gb|BI776784.2|BI776784 EBpi07_SQ001_L22_R pistil, 12 DPA, n... 28 2.9
gb|BF264568.1|BF264568 HV_CEa0009M12f Hordeum vulgare seedl... 27 3.0
gb|BU996814.1|BU996814 HM14N14r HM Hordeum vulgare subsp. v... 27 3.1
gb|BF621935.2|BF621935 HVSMEa0001F07f Hordeum vulgare seedl... 30 3.7
gb|BQ460001.1|BQ460001 HA07H16r HA Hordeum vulgare subsp. v... 28 3.7
gb|BI947101.1|BI947101 HVSMEl0003K22f Hordeum vulgare spike... 34 3.9
gb|BI950149.1|BI950149 HVSMEl0019A16f Hordeum vulgare spike... 34 3.9
gb|BQ471743.1|BQ471743 HV03F11r HV Hordeum vulgare subsp. v... 34 3.9
gb|BQ472163.1|BQ472163 HV04J12r HV Hordeum vulgare subsp. v... 34 3.9
gb|BQ664728.1|BQ664728 HV04J12u HV Hordeum vulgare subsp. v... 34 3.9
gb|BU984349.1|BU984349 HF03K24r HF Hordeum vulgare subsp. v... 34 3.9
gb|CA000073.1|CA000073 HS16E01u HS Hordeum vulgare subsp. v... 34 3.9
gb|CA004002.1|CA004002 HS16E01r HS Hordeum vulgare subsp. v... 34 3.9
gb|CB877683.1|CB877683 HP05N03T HP Hordeum vulgare subsp. v... 34 3.9
gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotranspos... 34 3.9
emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H 31 4.2
gb|BG309945.2|BG309945 HVSMEc0015F14f Hordeum vulgare seedl... 32 4.8
gb|AV915847.1|AV915847 AV915847 K. Sato unpublished cDNA li... 29 5.1
gb|BE601924.1|BE601924 HVSMEh0100D02f Hordeum vulgare 5-45 ... 33 5.3
gb|BE602834.1|BE602834 HVSMEh0101O24f Hordeum vulgare 5-45 ... 33 5.3
gb|BE454375.2|BE454375 HVSMEh0093O04f Hordeum vulgare 5-45 ... 33 5.3
gb|BI950540.1|BI950540 HVSMEl0021D24f Hordeum vulgare spike... 33 5.3
gb|BF267775.2|BF267775 HV_CEa0018N18f Hordeum vulgare seedl... 33 5.3
gb|BG366404.2|BG366404 HVSMEi0006O23f Hordeum vulgare 20 DA... 33 5.3
gb|BF262206.3|BF262206 HV_CEa0003J19f Hordeum vulgare seedl... 33 5.3
gb|BF264429.3|BF264429 HV_CEa0009G11f Hordeum vulgare seedl... 33 5.3
gb|AV923046.1|AV923046 AV923046 K. Sato unpublished cDNA li... 33 5.3
gb|BQ464019.1|BQ464019 HF01B24T HF Hordeum vulgare subsp. v... 33 5.3
gb|BQ464299.1|BQ464299 HF01O07T HF Hordeum vulgare subsp. v... 33 5.3
gb|BQ464644.1|BQ464644 HF02N17r HF Hordeum vulgare subsp. v... 33 5.3
gb|BQ472360.1|BQ472360 HB09N06T BC Hordeum vulgare subsp. v... 33 5.3
gb|BQ472408.1|BQ472408 HB09L05T BC Hordeum vulgare subsp. v... 33 5.3
gb|BQ472504.1|BQ472504 HB09F21T BC Hordeum vulgare subsp. v... 33 5.3
gb|BQ472538.1|BQ472538 HB09E09T BC Hordeum vulgare subsp. v... 33 5.3
gb|BQ472746.1|BQ472746 HB01J22r BC Hordeum vulgare subsp. v... 33 5.3
gb|BQ472750.1|BQ472750 HB01J13r BC Hordeum vulgare subsp. v... 33 5.3
gb|BQ472760.1|BQ472760 HB01I22r BC Hordeum vulgare subsp. v... 33 5.3
gb|BQ472821.1|BQ472821 HB01G02r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU966671.1|BU966671 HB02A04r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU967359.1|BU967359 HB04B01r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU967411.1|BU967411 HB04D16r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968078.1|BU968078 HB06F18r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968164.1|BU968164 HB06K05r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968280.1|BU968280 HB07A11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968358.1|BU968358 HB07E09r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968390.1|BU968390 HB07F21r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968493.1|BU968493 HB07L05r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968534.1|BU968534 HB07N06r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968706.1|BU968706 HB08F12r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968767.1|BU968767 HB08I08r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968773.1|BU968773 HB08I17r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968831.1|BU968831 HB08L14r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968846.1|BU968846 HB08M08r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968952.1|BU968952 HB10B08r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU968974.1|BU968974 HB10C11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969078.1|BU969078 HB10H11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969138.1|BU969138 HB10K11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969201.1|BU969201 HB10N15r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969250.1|BU969250 HB10P20r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969257.1|BU969257 HB11A03r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969262.1|BU969262 HB11A09r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969338.1|BU969338 HB11D21r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969377.1|BU969377 HB11F17r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969462.1|BU969462 HB11J13r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969534.1|BU969534 HB11M18r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969730.1|BU969730 HB12G15r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969787.1|BU969787 HB12I24r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969891.1|BU969891 HB12P05r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU969933.1|BU969933 HB13B11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU970215.1|BU970215 HB13P16r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU970231.1|BU970231 HB14A15r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU970240.1|BU970240 HB14B02r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU970652.1|BU970652 HB15E16r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU970753.1|BU970753 HB15J10r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU970798.1|BU970798 HB15L13r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU970884.1|BU970884 HB15P11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU970893.1|BU970893 HB15P20r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU971198.1|BU971198 HB16O11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU971250.1|BU971250 HB17A22r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU971741.1|BU971741 HB19I16r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU971803.1|BU971803 HB19L15r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU971859.1|BU971859 HB19O04r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU971899.1|BU971899 HB20A02r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU972025.1|BU972025 HB20G03r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU972057.1|BU972057 HB20H14r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU972136.1|BU972136 HB20L12r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU972849.1|BU972849 HB22O16r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU972944.1|BU972944 HB23D18r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU973586.1|BU973586 HB25G10r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU973591.1|BU973591 HB25G15r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU973755.1|BU973755 HB25N24r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU973934.1|BU973934 HB26F22r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU974247.1|BU974247 HB27F11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU974313.1|BU974313 HB27I18r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU974364.1|BU974364 HB27L05r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU974461.1|BU974461 HB28A03r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU974477.1|BU974477 HB28A20r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU974628.1|BU974628 HB28J05r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU974676.1|BU974676 HB28L20r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU974741.1|BU974741 HB28P03r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU975220.1|BU975220 HB30H06r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU975351.1|BU975351 HB30O09r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU975594.1|BU975594 HB31K10r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU975612.1|BU975612 HB31L11r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU975979.1|BU975979 HB32O06r BC Hordeum vulgare subsp. v... 33 5.3
gb|BU984373.1|BU984373 HF03M01r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU984562.1|BU984562 HF04E20r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU985102.1|BU985102 HF06C04r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU985321.1|BU985321 HF06M16r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU985402.1|BU985402 HF07B05r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU985523.1|BU985523 HF07M12r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU986395.1|BU986395 HF11L01r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU987217.1|BU987217 HF14C04r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU987249.1|BU987249 HF14D15r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU987361.1|BU987361 HF14I19r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU987614.1|BU987614 HF15E05r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU987708.1|BU987708 HF15I16r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU988034.1|BU988034 HF16H19r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU988132.1|BU988132 HF16M03r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU988367.1|BU988367 HF17G23r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU988610.1|BU988610 HF18C15r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU988670.1|BU988670 HF18F18r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU989830.1|BU989830 HF22N01r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU990536.1|BU990536 HF25F12r HF Hordeum vulgare subsp. v... 33 5.3
gb|BU990671.1|BU990671 HF25L16r HF Hordeum vulgare subsp. v... 33 5.3
gb|CA019946.1|CA019946 HV13O01r HV Hordeum vulgare subsp. v... 33 5.3
gb|BF630049.2|BF630049 HVSMEb0007M12f Hordeum vulgare seedl... 29 5.5
gb|BG344099.1|BG344099 HVSMEg0007K12f Hordeum vulgare pre-a... 32 6.4
gb|BF626438.2|BF626438 HVSMEa0018C20f Hordeum vulgare seedl... 33 7.3
gb|BG366433.1|BG366433 HVSMEi0007A13f Hordeum vulgare 20 DA... 33 7.3
gb|BI948339.1|BI948339 HVSMEl0009B14f Hordeum vulgare spike... 33 7.3
gb|AV934203.1|AV934203 AV934203 K. Sato unpublished cDNA li... 33 7.3
gb|AV934580.1|AV934580 AV934580 K. Sato unpublished cDNA li... 33 7.3
gb|AV936458.1|AV936458 AV936458 K. Sato unpublished cDNA li... 33 7.3
gb|BJ465007.1|BJ465007 BJ465007 K. Sato unpublished cDNA li... 33 7.3
gb|BJ469779.1|BJ469779 BJ469779 K. Sato unpublished cDNA li... 33 7.3
gb|BJ470191.1|BJ470191 BJ470191 K. Sato unpublished cDNA li... 33 7.3
gb|BJ471833.1|BJ471833 BJ471833 K. Sato unpublished cDNA li... 33 7.3
gb|BJ472160.1|BJ472160 BJ472160 K. Sato unpublished cDNA li... 33 7.3
gb|BJ473068.1|BJ473068 BJ473068 K. Sato unpublished cDNA li... 33 7.3
gb|BJ473635.1|BJ473635 BJ473635 K. Sato unpublished cDNA li... 33 7.3
gb|BJ475175.1|BJ475175 BJ475175 K. Sato unpublished cDNA li... 33 7.3
gb|BJ476178.1|BJ476178 BJ476178 K. Sato unpublished cDNA li... 33 7.3
gb|BJ476869.1|BJ476869 BJ476869 K. Sato unpublished cDNA li... 33 7.3
gb|BJ477244.1|BJ477244 BJ477244 K. Sato unpublished cDNA li... 33 7.3
gb|BQ471409.1|BQ471409 HV02F15r HV Hordeum vulgare subsp. v... 33 7.3
gb|BI779862.2|BI779862 EBem07_SQ001_E23_R embryo, 28 DPA, n... 33 7.3
gb|BM369382.2|BM369382 EBem07_SQ003_G20_R embryo, 28 DPA, n... 33 7.3
gb|BM370144.2|BM370144 EBro08_SQ003_C03_R root, 3 week, dro... 33 7.3
gb|BU986528.1|BU986528 HF12C05r HF Hordeum vulgare subsp. v... 33 7.3
gb|BU987445.1|BU987445 HF14M11r HF Hordeum vulgare subsp. v... 33 7.3
gb|CA003231.1|CA003231 HS09M23r HS Hordeum vulgare subsp. v... 33 7.3
gb|CA031865.1|CA031865 HX11F16r HX Hordeum vulgare subsp. v... 33 7.3
gb|CB876464.1|CB876464 HX11F16w HX Hordeum vulgare subsp. v... 33 7.3
gb|CB878860.1|CB878860 HP10A23T HP Hordeum vulgare subsp. v... 33 7.3
gb|CV063720.1|CV063720 BNEL92d8 Barley EST endosperm librar... 33 7.3
gb|BF629704.2|BF629704 HVSMEb0013D09f Hordeum vulgare seedl... 26 7.7
gb|BQ465636.1|BQ465636 HU04D19r HU Hordeum vulgare subsp. v... 24 9.7
>gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002G15f, mRNA sequence
Length = 853
Score = 271 bits (587), Expect = 7e-072
Identities = 106/148 (71%), Positives = 125/148 (84%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K++L++GLWSPEEDEKLMNHI K+G+GCWSSVPK+AGL+RCGKSCRLRWINYLRPDLKRG
Sbjct: 218 KKRLKRGLWSPEEDEKLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYLRPDLKRG 397
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
AF+Q+EEDLII LH++LGN+WSQIAAQLPGRTDNE+KN WNS IKKKLRQ+GIDP THKP
Sbjct: 398 AFSQEEEDLIIHLHSILGNKWSQIAAQLPGRTDNEVKNFWNSFIKKKLRQRGIDPATHKP 577
Query: 642 LTEADHGGAAPTISTERTSGSSDINPSS 725
L AA +S +++ SS
Sbjct: 578 LDPDAVAVAAVPVSRSAVFSEAELILSS 661
Score = 150 bits (322), Expect = 3e-035
Identities = 72/110 (65%), Positives = 75/110 (68%)
Frame = -3 / -2
Query: 670 AAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXX 491
AA ++ SGLWV GSMP SFFLM EF +FL SLSV PGSCAAI*DHL PR
Sbjct: 606 AATATASGSSGLWVAGSMPRWRSFFLMKEFQKFLTSLSVRPGSCAAI*DHLLPRMEXRWM 427
Query: 490 XXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
S APLLRSGLR*FIHLSLQLFPHL PA LGTELQQP P M
Sbjct: 426 MRSSSSCEKAPLLRSGLR*FIHLSLQLFPHLSRPAILGTELQQPLPYLAM 277
Score = 138 bits (297), Expect = 7e-032
Identities = 68/138 (49%), Positives = 85/138 (61%)
Frame = -2 / -1
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LVG ++A L +LLLD VP +LDL++ QLR +LRP V ED V +DDEV +L E
Sbjct: 574 LVGGRVDAALAELLLDEGVPEVLDLVVGAAGQLRGDLRPLVAEDGVXVDDEVLLLLREGA 395
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
LEV PQ+VYPPQP L APLK G+ APAA+A+L V+H+ L+LLR PE Q LL
Sbjct: 394 PLEVRPQVVYPPQPAALPAPLKACNLGDGAPAAVAVLGNVVHQLLVLLRRPEAALQPLLR 215
Query: 278 AARMPPHLNAMQNLGAPT 225
+R H PT
Sbjct: 214 PSRPLRHAAGRLRRHEPT 161
Score = 72.1 bits (151), Expect = 1e-011
Identities = 48/118 (40%), Positives = 52/118 (44%)
Frame = +1 / +3
Query: 286 RS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGH 465
R * SG RR R+ * T S A AAGA P +GA R G*GG*T *G+TSR
Sbjct: 222 RG*SAASGRRRRTRS**TTLPSTATAAGAPSPRLQALRGAGRAAG*GG*TT*GRTSRGAP 401
Query: 466 SPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
S RSC RSR GT +SRRS A PTS
Sbjct: 402 SRRRRRTSSSTXTPSSATSGLRSPRSCPAAPTTRSRTSGTPSSRRSSASAASTRPPTS 575
Score = 65.2 bits (136), Expect = 1e-009
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = -1 / -3
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
S*G AS SLSTSA +S RT + + W +SSSS C S S PP TR SAS+ S
Sbjct: 392 S*GPASGSLSTSACSSSRTSQGLQSWGRSSSSRCRTWQCGSSASRPPPATRGRASASSSS 213
Query: 276 SKNASPSQRNAEPGSSNQTHRAYR 205
AS +R A+ +N RA R
Sbjct: 212 LPAASTCRRPAKTTRTNAQWRAVR 141
Score = 45.1 bits (92), Expect(2) = 3e-010
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS+ AAAR QE +EL+HQEEA RH HPQA
Sbjct: 451 QQVVSDRRAAARPHRQRGQELLELLHQEEAPPARHRPGHPQA 576
Score = 40.9 bits (83), Expect(2) = 3e-010
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +2 / +1
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
+ EAE LV GG E E H + LLEL Q +VR+EL AEVDKL E
Sbjct: 217 EEEAEARPLVAGGGREADEPHCQVRQRLLELRPQDCRP*EVREELQAEVDKLPE 378
>emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA
Length = 1270
Score = 266 bits (575), Expect = 3e-070
Identities = 104/150 (69%), Positives = 116/150 (77%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
K+RKGLWSPEEDEKL NHI +HG GCWSSVP+LA L RCGKSCRLRWINYLRPDLKRG F
Sbjct: 101 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCF 280
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLT 647
+Q EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSCIKKKLRQ+GIDP THKP+
Sbjct: 281 SQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMA 460
Query: 648 EADHGGAAPTISTERTSGSSDINPSSTGPL 737
AD AA + + P+ G L
Sbjct: 461 SADTATAAAALPDAEEEDRKPLCPAVDGSL 550
Score = 126 bits (270), Expect = 4e-028
Identities = 59/129 (45%), Positives = 83/129 (64%)
Frame = -2 / -1
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G C + LV G++A LP+LLLDA VP +LDL++ P Q+R +LRPPV ED V+
Sbjct: 487 GRCRCRVRGGHGLVRGGVDALLPELLLDAAVPEVLDLVVRPARQVRRDLRPPVAEDLVER 308
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DD V +LGE +LEV ++V PP+ L+A ++ E G+ APAA A+ V+ E L+LL
Sbjct: 307 DDVVLLLLGEAAALEVGAEVVDPPEAAALAAAVQRGEPGDGAPAADAVTDDVVVELLVLL 128
Query: 314 RGPEPLSQL 288
P+PL+ L
Sbjct: 127 GRPQPLADL 101
Score = 122 bits (262), Expect = 5e-027
Identities = 61/106 (57%), Positives = 62/106 (58%)
Frame = -3 / -2
Query: 670 AAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXX 491
AA SA GL V GSMP C SFFLM F +FLISLSV PG C AI*DHL PR
Sbjct: 483 AAVAVSAEAMGLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWWSAT 304
Query: 490 XXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
W P LRSG R* IH QL P S ASLGTELQQP P
Sbjct: 303 MWSSSCWEKQPRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTP 166
Score = 65.7 bits (137), Expect = 9e-010
Identities = 42/114 (36%), Positives = 47/114 (41%)
Frame = +1 / +3
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXX 477
RG G RR R+S T A AAGA P S A R GG T TS SP
Sbjct: 111 RGCGRPRRTRSSTTTSSVTASAAGAPSPGSPR*TAAARAAASGGSTTSAPTSSAAASPSR 290
Query: 478 XXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS G +A P TS
Sbjct: 291 RRTTSSRSTRSSATGGLRSRRTCRAGRTTRSRTSGTAASRRSSGSRASTPPRTS 452
Score = 39.6 bits (80), Expect = 0.062
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS+ A A D DQE +E +HQEEA A H +H QA
Sbjct: 328 QQVVSDRVAPAGPDGQRDQELLEQLHQEEAPAAGHRPRHAQA 453
Score = 38.6 bits (78), Expect = 0.12
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -1 / -3
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAP 298
+*G S ST +S R+ A+R W +SSSS C S PP+ T AP
Sbjct: 269 A*GRGGGS*STGGGSSCRSGSARRAWGRSSSSRRRDG*CGCRASRPPRATTAP 111
>gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019E14f, mRNA sequence
Length = 635
Score = 265 bits (574), Expect = 5e-070
Identities = 104/150 (69%), Positives = 115/150 (76%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
K+RKGLWSPEEDEKL NHI +HG GCWSSVP+LA L RCGKSCRLRWINYLRPDLKRG F
Sbjct: 116 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCF 295
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLT 647
+Q EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSCIKKKLRQ+GIDP THKP+
Sbjct: 296 SQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMA 475
Query: 648 EADHGGAAPTISTERTSGSSDINPSSTGPL 737
AD AA + + P G L
Sbjct: 476 SADTATAAAALPDAEEEDRKPLCPEIDGSL 565
Score = 128 bits (275), Expect = 8e-029
Identities = 67/132 (50%), Positives = 71/132 (53%)
Frame = -3 / -3
Query: 736 RGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLS 557
R P + G L + AA SA GL V GSMP C SFFLM F +FLISLS
Sbjct: 564 RLPSISGQRGLRSSSSASGNAAAAVAVSAEAMGLCVAGSMPCCRSFFLMQLFQKFLISLS 385
Query: 556 VLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLG 377
V PG C AI*DHL PR W P LRSG R* IH QL P S ASLG
Sbjct: 384 VRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLPQRFSAASLG 205
Query: 376 TELQQPWPCFVM 341
TELQQP PC +M
Sbjct: 204 TELQQPTPCRMM 169
Score = 118 bits (252), Expect = 1e-025
Identities = 57/129 (44%), Positives = 81/129 (62%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G C + LV ++A LP+LLLDA VP +LDL++ P Q+R +LRPPV ED V+
Sbjct: 502 GRCRCRVRGGHGLVRGRVDALLPELLLDAAVPEVLDLVVRPARQVRRDLRPPVAEDLVER 323
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DD V +LGE +LEV ++V PP+ L+A ++ E G+ APAA A+ V+ E L+LL
Sbjct: 322 DDVVLLLLGEAAALEVGAEVVDPPEAAALAAAVQRGEPGDGAPAADAVPDDVVVELLVLL 143
Query: 314 RGPEPLSQL 288
P+ L+ L
Sbjct: 142 GRPQSLADL 116
Score = 59.3 bits (123), Expect = 7e-008
Identities = 40/114 (35%), Positives = 45/114 (39%)
Frame = +1 / +3
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXX 477
R G RR R+S T A AAGA P S A R GG T TS SP
Sbjct: 126 RDCGRPRRTRSSTTTSSGTASAAGAPSPGSPR*TAAARAAASGGSTTSAPTSSAAASPSR 305
Query: 478 XXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS G +A TS
Sbjct: 306 RRTTSSRSTRSSATGGLRSRRTCRAGRTTRSRTSGTAASRRSSGSRASTRPRTS 467
Score = 39.6 bits (80), Expect = 0.062
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -1 / -1
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAP 298
+*G S ST +S R+ A+R W +SSSS A C S PP+ T P
Sbjct: 284 A*GRGGGS*STGGGSSCRSGSARRAWGRSSSSRRRAG*CGCRASRPPRATTVP 126
Score = 38.2 bits (77), Expect = 0.16
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS+ A A D DQE +E +HQEEA A H H QA
Sbjct: 343 QQVVSDRVAPAGPDGQRDQELLEQLHQEEAPAAGHRPGHAQA 468
>gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. vulgare cDNA clone HM13L14
5-PRIME, mRNA sequence
Length = 648
Score = 265 bits (574), Expect = 5e-070
Identities = 104/150 (69%), Positives = 115/150 (76%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
K+RKGLWSPEEDEKL NHI +HG GCWSSVP+LA L RCGKSCRLRWINYLRPDLKRG F
Sbjct: 125 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCF 304
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLT 647
+Q EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSCIKKKLRQ+GIDP THKP+
Sbjct: 305 SQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMA 484
Query: 648 EADHGGAAPTISTERTSGSSDINPSSTGPL 737
AD AA + + P G L
Sbjct: 485 SADTATAAAALPDAEEEDRKPLCPEIDGSL 574
Score = 128 bits (275), Expect = 8e-029
Identities = 67/132 (50%), Positives = 71/132 (53%)
Frame = -3 / -1
Query: 736 RGPVLDGLMSLDPEVLSVLMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLS 557
R P + G L + AA SA GL V GSMP C SFFLM F +FLISLS
Sbjct: 573 RLPSISGQRGLRSSSSASGNAAAAVAVSAEAMGLCVAGSMPCCRSFFLMQLFQKFLISLS 394
Query: 556 VLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLG 377
V PG C AI*DHL PR W P LRSG R* IH QL P S ASLG
Sbjct: 393 VRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLPQRFSAASLG 214
Query: 376 TELQQPWPCFVM 341
TELQQP PC +M
Sbjct: 213 TELQQPTPCRMM 178
Score = 118 bits (252), Expect = 1e-025
Identities = 57/129 (44%), Positives = 81/129 (62%)
Frame = -2 / -3
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQL 495
G C + LV ++A LP+LLLDA VP +LDL++ P Q+R +LRPPV ED V+
Sbjct: 511 GRCRCRVRGGHGLVRGRVDALLPELLLDAAVPEVLDLVVRPARQVRRDLRPPVAEDLVER 332
Query: 494 DDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILL 315
DD V +LGE +LEV ++V PP+ L+A ++ E G+ APAA A+ V+ E L+LL
Sbjct: 331 DDVVLLLLGEAAALEVGAEVVDPPEAAALAAAVQRGEPGDGAPAADAVPDDVVVELLVLL 152
Query: 314 RGPEPLSQL 288
P+ L+ L
Sbjct: 151 GRPQSLADL 125
Score = 59.3 bits (123), Expect = 7e-008
Identities = 40/114 (35%), Positives = 45/114 (39%)
Frame = +1 / +3
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXX 477
R G RR R+S T A AAGA P S A R GG T TS SP
Sbjct: 135 RDCGRPRRTRSSTTTSSGTASAAGAPSPGSPR*TAAARAAASGGSTTSAPTSSAAASPSR 314
Query: 478 XXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS G +A TS
Sbjct: 315 RRTTSSRSTRSSATGGLRSRRTCRAGRTTRSRTSGTAASRRSSGSRASTRPRTS 476
Score = 39.6 bits (80), Expect = 0.062
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAP 298
+*G S ST +S R+ A+R W +SSSS A C S PP+ T P
Sbjct: 293 A*GRGGGS*STGGGSSCRSGSARRAWGRSSSSRRRAG*CGCRASRPPRATTVP 135
Score = 38.2 bits (77), Expect = 0.16
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS+ A A D DQE +E +HQEEA A H H QA
Sbjct: 352 QQVVSDRVAPAGPDGQRDQELLEQLHQEEAPAAGHRPGHAQA 477
>gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0017F20f, mRNA sequence
Length = 786
Score = 243 bits (525), Expect(2) = 4e-068
Identities = 95/133 (71%), Positives = 110/133 (82%)
Frame = +3 / +3
Query: 327 KLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHA 506
KLMNHI K+G+GCWSSVPK+AGL+RCGKSCRLRWINYLRPDLKRGAF+Q+EEDLII LH+
Sbjct: 183 KLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYLRPDLKRGAFSQEEEDLIIHLHS 362
Query: 507 VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTIST 686
+LGN+WSQIAAQLPGRTDNE+KN WNS IKKKLRQ+GIDP THKPL A A +S
Sbjct: 363 ILGNKWSQIAAQLPGRTDNEVKNFWNSFIKKKLRQRGIDPATHKPLAPAAVAAAVAPVSR 542
Query: 687 ERTSGSSDINPSS 725
+++ SS
Sbjct: 543 SAVFSEAELILSS 581
Score = 151 bits (325), Expect(2) = 4e-039
Identities = 71/105 (67%), Positives = 73/105 (69%)
Frame = -3 / -3
Query: 655 SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXX 476
+A SGLWV GSMP SFFLM EF +FL SLSV PGSCAAI*DHL PR
Sbjct: 511 AAGASGLWVAGSMPRWRSFFLMKEFQKFLTSLSVRPGSCAAI*DHLLPRMEWRWMMRSSS 332
Query: 475 SWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
S APLLRSGLR*FIHLSLQLFPHL PA LGTELQQP P M
Sbjct: 331 SCEKAPLLRSGLR*FIHLSLQLFPHLSRPAILGTELQQPLPYLAM 197
Score = 122 bits (260), Expect = 9e-027
Identities = 55/103 (53%), Positives = 71/103 (68%)
Frame = -2 / -2
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LVG ++A L +LLLD VP +LDL++ QLR +LRP V ED V++DDEV +L E
Sbjct: 494 LVGGRVDAALAELLLDEGVPEVLDLVVGAAGQLRGDLRPLVAEDGVEVDDEVLLLLREGA 315
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHE 330
LEV PQ+VYPPQP L APLK G+ APAA+A+L V+H+
Sbjct: 314 PLEVRPQVVYPPQPAALPAPLKACNLGDGAPAAVAVLGNVVHQ 186
Score = 62.5 bits (130), Expect = 8e-009
Identities = 38/97 (39%), Positives = 41/97 (42%)
Frame = +1 / +1
Query: 349 SMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXX 528
S A AAGA P +GA R G*GG*T *G+TSR S
Sbjct: 205 STATAAGAPSPRLQALRGAGRAAG*GG*TT*GRTSRGAPSRRRRRTSSSTSTPSSATSGL 384
Query: 529 XXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
RSC RSR GT +SRRS A PTS
Sbjct: 385 RSPRSCPAAPTTRSRTSGTPSSRRSSASAASTRPPTS 495
Score = 45.1 bits (92), Expect(2) = 8e-007
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS+ AAAR QE +EL+HQEEA RH HPQA
Sbjct: 371 QQVVSDRRAAARPHRQRGQELLELLHQEEAPPARHRPGHPQA 496
Score = 40.5 bits (82), Expect = 0.033
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = -1 / -1
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAP 298
S*G AS SLSTSA +S RT + + W +SSSS C S G + P
Sbjct: 312 S*GPASGSLSTSACSSSRTSQGLQSWGRSSSSRCRTWQCGSSAFSSSSGDQRP 154
Score = 36.8 bits (74), Expect(2) = 4e-068
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEK 329
K++L++GLWSPEEDEK
Sbjct: 137 KKRLKRGLWSPEEDEK 184
Score = 31.3 bits (62), Expect(2) = 4e-039
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1 / -2
Query: 330 VSHPPQGTRAPFSASACSSKNASPSQRNAEPGSSNQTHRAYR 205
+S PP TR SAS+ S AS +R A+ +N RA R
Sbjct: 185 LSRPPPATRGRASASSSSLPAASTCRRPAKTTRTNAQWRAVR 60
Score = 29.0 bits (57), Expect(2) = 8e-007
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +2 / +2
Query: 335 ESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
E H + LLEL Q +VR+EL AEVDKL E
Sbjct: 191 EPHCQVRQRLLELRPQDCRP*EVREELQAEVDKLPE 298
>gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_O04 5', mRNA sequence
Length = 383
Score = 255 bits (552), Expect = 5e-067
Identities = 97/118 (82%), Positives = 105/118 (88%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
K+RKGLWSPEEDEKL NHI +HG GCWSSVP+LA L RCGKSCRLRWINYLRPDLKRG F
Sbjct: 29 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCF 208
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+Q EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSCIKKKLRQ+GIDP THKP
Sbjct: 209 SQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKP 382
Score = 124 bits (266), Expect = 1e-027
Identities = 59/100 (59%), Positives = 61/100 (61%)
Frame = -3 / -3
Query: 640 GLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANA 461
GL V GSMP C SFFLM F +FLISLSV PG C AI*DHL PR W
Sbjct: 381 GLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQ 202
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P LRSG R* IH QL P S ASLGTELQQP PC +M
Sbjct: 201 PRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTPCRMM 82
Score = 116 bits (247), Expect = 6e-025
Identities = 55/117 (47%), Positives = 78/117 (66%)
Frame = -2 / -2
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LV ++A LP+LLLDA VP +LDL++ P Q+R +LRPPV ED V+ DD V +LGE
Sbjct: 379 LVRGRVDALLPELLLDAAVPEVLDLVVRPARQVRRDLRPPVAEDLVERDDVVLLLLGEAA 200
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
+LEV ++V PP+ L+A ++ E G+ APAA A+ V+ E L+LL P+ L+ L
Sbjct: 199 ALEVGAEVVDPPEAAALAAAVQRGEPGDGAPAADAVPDDVVVELLVLLGRPQSLADL 29
Score = 59.3 bits (123), Expect = 7e-008
Identities = 40/114 (35%), Positives = 45/114 (39%)
Frame = +1 / +3
Query: 298 RGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXX 477
R G RR R+S T A AAGA P S A R GG T TS SP
Sbjct: 39 RDCGRPRRTRSSTTTSSGTASAAGAPSPGSPR*TAAARAAASGGSTTSAPTSSAAASPSR 218
Query: 478 XXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS G +A TS
Sbjct: 219 RRTTSSRSTRSSATGGLRSRRTCRAGRTTRSRTSGTAASRRSSGSRASTRPRTS 380
Score = 39.6 bits (80), Expect = 0.062
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -1 / -1
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAP 298
+*G S ST +S R+ A+R W +SSSS A C S PP+ T P
Sbjct: 197 A*GRGGGS*STGGGSSCRSGSARRAWGRSSSSRRRAG*CGCRASRPPRATTVP 39
Score = 38.2 bits (77), Expect = 0.16
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS+ A A D DQE +E +HQEEA A H H QA
Sbjct: 256 QQVVSDRVAPAGPDGQRDQELLEQLHQEEAPAAGHRPGHAQA 381
>gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002J21f, mRNA sequence
Length = 845
Score = 251 bits (542), Expect = 1e-065
Identities = 91/126 (72%), Positives = 108/126 (85%)
Frame = +3 / +3
Query: 267 HSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 446
H CC KQK+++GLWSPEEDEKL+++IT HGH CWS+VPK AGLQRCGKSCRLRWINYLRP
Sbjct: 54 HHCCSKQKVKRGLWSPEEDEKLLSYITAHGHSCWSAVPKNAGLQRCGKSCRLRWINYLRP 233
Query: 447 DLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDP 626
DLKRG F++ EE I+++H +LGNRW+QIA LPGRTDNE+KN WNSCIKKKL +G+DP
Sbjct: 234 DLKRGTFSEQEERTILDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLIAQGLDP 413
Query: 627 NTHKPL 644
TH L
Sbjct: 414 KTHNLL 431
Score = 123 bits (263), Expect = 4e-027
Identities = 61/124 (49%), Positives = 64/124 (51%)
Frame = -3 / -2
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
LWVLGS P +SFFLMHEF +FL SLSV PG C AI H P+ P
Sbjct: 424 LWVLGSRPCAMSFFLMHEFQKFLTSLSVRPGRCLAICAHRLPKMRWTSRMVRSSCSEKVP 245
Query: 457 LLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL* 278
LRSG R* IH S QL P SPA LGT LQQ WPC VM FCL
Sbjct: 244 RLRSGRR*LIHRSRQLLPQRCSPAFLGTALQQLWPCAVM*LRSFSSSSGDHSPRFTFCLL 65
Query: 277 QQEC 266
QQ C
Sbjct: 64 QQWC 53
Score = 114 bits (243), Expect = 2e-024
Identities = 55/132 (41%), Positives = 81/132 (61%)
Frame = -2 / -1
Query: 659 VISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVF 480
V+ + ++G+G+ +LLLDARVP +LDL++ + +L PPV +D+V ++D
Sbjct: 446 VLGCREEVMGLGVETLRDELLLDARVPEVLDLVVRAAR*VLGDLCPPVAQDAVDVEDGAL 267
Query: 479 FVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEP 300
+L E +LEV ++V PP+P L+A L P G+ APAA+AM V E L+L RGP P
Sbjct: 266 LLLREGAALEVRTEVVDPPEPAALAAAL*PGVLGDGAPAAVAMRRDVAEELLVLFRGP*P 87
Query: 299 LSQLLLVAARMP 264
LLL AA +P
Sbjct: 86 PLHLLLAAAVVP 51
Score = 56.1 bits (116), Expect(2) = 2e-009
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +2 / +2
Query: 272 LLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
LL QA+ E GA+VP G E + H+ AWP LLE Q R A+ +R+EL A VD+L
Sbjct: 59 LLQQAKGEAGAMVPGRGREAPQLHHGAWPQLLERRPQERRATALRQELPAPVDQL 223
Score = 48.7 bits (100), Expect = 1e-004
Identities = 29/64 (45%), Positives = 34/64 (53%)
Frame = -1 / -3
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+*G S ST A +S R+ A+R W + SSS GHA C S P GT AP S AC
Sbjct: 243 A*GPDGGS*STGAGSSCRSAVARRSWGRRSSSCGHAP*CS*GASRPLPGTIAPASPFACC 64
Query: 276 SKNA 265
S A
Sbjct: 63 SSGA 52
Score = 31.3 bits (62), Expect(2) = 2e-009
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +1 / +1
Query: 565 RSRIYGTRASRRS*GRKALIPTP 633
RSR GTRASRRS R+ P P
Sbjct: 352 RSRTSGTRASRRSSSRRVSTPRP 420
>gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. vulgare cDNA clone HI10A14
5-PRIME, mRNA sequence
Length = 580
Score = 249 bits (539), Expect = 3e-065
Identities = 93/120 (77%), Positives = 106/120 (88%)
Frame = +3 / +1
Query: 261 GRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 440
G HSCC KQK+R+GLWSPEEDEKL+ +IT HGHGCWSSVP+ AGLQRCGKSCRLRWINYL
Sbjct: 64 GHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWINYL 243
Query: 441 RPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGI 620
RPDLKRG+F+Q+EE LI+ELH VLGNRW+QIA LPGRTDNE+KN WNS IKKKL + +
Sbjct: 244 RPDLKRGSFSQEEEALIVELHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKLISQAV 423
Score = 136 bits (291), Expect = 5e-031
Identities = 65/116 (56%), Positives = 67/116 (57%)
Frame = -3 / -3
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FI 428
+SFFLM EF +F SLSVLPG C AI HLFP T S PLLRSGLR* I
Sbjct: 410 MSFFLMVEFQKFFTSLSVLPGRCLAIWAHLFPSTLWSSTMRASSSCEKLPLLRSGLR*LI 231
Query: 427 HLSLQLFPHL*SPASLGTELQQPWPCFVMXXXXXXXXXXXXXXXXXFCL*QQECLP 260
H SLQL PHL SPA LGTELQQPWPC VM FCL QQE P
Sbjct: 230 HRSLQLLPHLCSPACLGTELQQPWPCAVMYLTSFSSSSGDHRPLLTFCLLQQEWXP 63
Score = 117 bits (251), Expect = 2e-025
Identities = 58/111 (52%), Positives = 71/111 (63%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+LLLD VP +L LI+ P Q+ L PPVP V+LDDE F +L E P LEV PQ+V P
Sbjct: 408 ELLLDGGVPEVLHLIVRPAGQVLGYLGPPVP*HPVELDDEGFLLLREAPPLEVRPQVVDP 229
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAA 273
PQP L+ PL+P +RAPAAMAM V+ E L+ L P+ LLLVAA
Sbjct: 228 PQPAALATPLQPGLSWDRAPAAMAMRGDVLDELLVFLW*PQAPPHLLLVAA 76
Score = 64.3 bits (134), Expect(2) = 4e-013
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +2 / +3
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLS 439
G LL QAE E+G +V G E + H++AWPWLLEL +T A++V +EL A VD+L
Sbjct: 63 GXPLLLQQAEGEEGPVVTRGRREARQVHHRAWPWLLELGPKTSRAAEVWQELQAAVDQLP 242
Query: 440 E 442
E
Sbjct: 243 E 245
Score = 55.6 bits (115), Expect = 9e-007
Identities = 32/66 (48%), Positives = 37/66 (56%)
Frame = -1 / -1
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
S*G AS S ST+A +S T A+ V SSSSHGHA C S P T P S SAC
Sbjct: 259 S*GPASGS*STAACSSCHTSAARLVLGPSSSSHGHAR*CT*RASRLPLVTTGPSSPSACC 80
Query: 276 SKNASP 259
S++ P
Sbjct: 79 SRSGXP 62
Score = 53.8 bits (111), Expect = 3e-006
Identities = 32/65 (49%), Positives = 37/65 (56%)
Frame = +1 / +2
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTS 453
AATSR * G R+ R+S T MAMAAGA + G +G R G GG T *G+TS
Sbjct: 77 AATSRR*GGACGHQRKTRSSSSTSPRMAMAAGARSQDKPGCRGVARAAGCGGSTT*GRTS 256
Query: 454 REGHS 468
R G S
Sbjct: 257 RGGAS 271
Score = 31.3 bits (62), Expect(2) = 4e-013
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEA 604
EQV + A AR+D * +E +EL HQEEA
Sbjct: 318 EQVGPDSQAPARQDGQ*GEELLELHHQEEA 407
>emb|X70881.1|HVMYB3G H.vulgare myb3 gene
Length = 3241
Score = 167 bits (360), Expect(2) = 1e-064
Identities = 63/82 (76%), Positives = 71/82 (86%)
Frame = +3 / +3
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
K+RKGLWSPEEDEKL NHI +HG GCWSSVP+LA L RCGKSCRLRWINYLRPDLKRG F
Sbjct: 1101 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCF 1280
Query: 468 AQDEEDLIIELHAVLGNRWSQI 533
+Q EED I+ LH +LGNR+ Q+
Sbjct: 1281 SQQEEDHIVALHQILGNRFVQL 1346
Score = 106 bits (226), Expect(2) = 1e-064
Identities = 43/73 (58%), Positives = 49/73 (67%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTS 698
RWSQIA+ LPGRTDNEIKN WNSCIKKKLRQ+GIDP THKP+ AD AA +
Sbjct: 1486 RWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMASADTATAAAALPDAEEE 1665
Query: 699 GSSDINPSSTGPL 737
+ P+ G L
Sbjct: 1666 DRKPLCPAVDGSL 1704
Score = 75.3 bits (158), Expect(2) = 1e-027
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = -2 / -3
Query: 530 LRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAM 351
L PV ED V+ DD V +LGE +LEV ++V PP+ L+A ++ E G+ APAA A+
Sbjct: 1343 LDEPVAEDLVERDDVVLLLLGEAAALEVGAEVVDPPEAAALAAAVQRGEPGDGAPAADAV 1164
Query: 350 LCYVIHEFLILLRGPEPLSQL 288
V+ E L+LL P+PL+ L
Sbjct: 1163 TDDVVVELLVLLGRPQPLADL 1101
Score = 75.3 bits (158), Expect(2) = 1e-027
Identities = 36/55 (65%), Positives = 37/55 (67%)
Frame = -3 / -3
Query: 670 AAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRT 506
AA SA GL V GSMP C SFFLM F +FLISLSV PG C AI*DHL RT
Sbjct: 1637 AAVAVSAEAMGLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCDAI*DHLHART 1473
Score = 57.9 bits (120), Expect(2) = 6e-017
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = -2 / -2
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
G C + LV G++A LP+LLLDA VP +LDL++ P Q+R +LRPP
Sbjct: 1641 GRCRCRVRGGHGLVRGGVDALLPELLLDAAVPEVLDLVVRPARQVRRDLRPP 1486
Score = 56.5 bits (117), Expect(2) = 6e-017
Identities = 28/57 (49%), Positives = 29/57 (50%)
Frame = -3 / -1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
+L PR W P LRSG R* IH QL P S ASLGTELQQP P
Sbjct: 1336 NLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLPQRFSAASLGTELQQPTP 1166
Score = 39.1 bits (79), Expect = 0.086
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1 / +2
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
+R+C+ G RSR GT ASRRS G +A P TS
Sbjct: 1502 RRTCRAGRTTRSRTSGTAASRRSSGSRASTPPRTS 1606
Score = 38.6 bits (78), Expect = 0.12
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAP 298
+*G S ST +S R+ A+R W +SSSS C S PP+ T AP
Sbjct: 1269 A*GRGGGS*STGGGSSCRSGSARRAWGRSSSSRRRDG*CGCRASRPPRATTAP 1111
Score = 38.6 bits (78), Expect = 0.12
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2 / +3
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
QVVS+ A A D DQE +E +HQEEA A H +H QA
Sbjct: 1485 QVVSDRVAPAGPDGQRDQELLEQLHQEEAPAAGHRPRHAQA 1607
>gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019O20f, mRNA sequence
Length = 528
Score = 233 bits (504), Expect = 2e-060
Identities = 86/132 (65%), Positives = 108/132 (81%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EEDE+L+ H+ HG GCW S+P AGL RCGKSCRLRWINY
Sbjct: 68 MGRSPCCEKAHTNKGAWTREEDERLVAHVRAHGEGCWRSLPSAAGLLRCGKSCRLRWINY 247
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F++DE++LI++LH++LGN+WS IAA+LPGRTDNEIKN WN+ I++KL +G
Sbjct: 248 LRPDLKRGNFSRDEDELIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRG 427
Query: 618 IDPNTHKPLTEA 653
IDP TH+P+T+A
Sbjct: 428 IDPVTHRPVTDA 463
Score = 111 bits (237), Expect = 1e-023
Identities = 55/141 (39%), Positives = 84/141 (59%)
Frame = -2 / -3
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
G++ QL D RVP +LDL++ PP Q R + RP V E++V+LDDE+ V E +LEV
Sbjct: 436 GVDPPAEQLPPDVRVPVVLDLVVRPPRQARGDERPLVAEEAVELDDELVLVAAEVAALEV 257
Query: 446 WPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARM 267
++V PP+ L+A + G RAPA + + V H+ L+LL P L ++ L+AAR
Sbjct: 256 GAEVVDPPEAAALAAAQQAGGAGQRAPAPLPVRPDVGHQPLVLLPRPRALVRVRLLAARR 77
Query: 266 PPHLNAMQNLGAPTKLTELTG 204
PPH ++++ +L+ L G
Sbjct: 76 PPHGRSLRS*WLCVRLSALLG 14
Score = 99.1 bits (210), Expect = 7e-020
Identities = 52/102 (50%), Positives = 58/102 (56%)
Frame = -3 / -1
Query: 655 SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXX 476
+ASV+G V GS+P SF M F FLISLSVLPG AA+ DHL PR
Sbjct: 465 AASVTGRCVTGSIPLPSSFLRMCVFQ*FLISLSVLPGRRAAMSDHLLPRRLWSLTMSSSS 286
Query: 475 SWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
S P LRSG R* IHL QL P PA+LG+E Q P PC
Sbjct: 285 SRLKLPRLRSGRR*LIHLRRQLLPQRSRPAALGSERQHPSPC 160
Score = 38.2 bits (77), Expect(2) = 0.089
Identities = 26/91 (28%), Positives = 29/91 (31%)
Frame = +1 / +3
Query: 364 AGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRS 543
AGA P A R GG T TS S R+
Sbjct: 174 AGARCPAPPACCAAARAAASGGSTTSAPTSSAATSAATRTSSSSSSTASSATSGRSSPRA 353
Query: 544 CQGGLIMRSRIYGTRASRRS*GRKALIPTPT 636
C+GG RSR GTR S S P+ T
Sbjct: 354 CRGGRTTRSRTTGTRTSGGSCSAGGSTPSRT 446
Score = 21.7 bits (41), Expect(2) = 0.089
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3 / +3
Query: 1029 TISTVMPPVSPSALST 1076
T+ + PP PS LST
Sbjct: 444 TVPSPTPPAPPSPLST 491
>gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019E16f, mRNA sequence
Length = 625
Score = 233 bits (503), Expect = 3e-060
Identities = 86/138 (62%), Positives = 108/138 (78%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
+ MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 74 IGMGRSPCCEKAHTNKGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWM 253
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG F D+++LII+LHA+LGN+WS IA QLPGRTDNEIKN WN+ IK+KL
Sbjct: 254 NYLRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLN 433
Query: 612 KGIDPNTHKPLTEADHGG 665
+G+DP+TH+P++ A G
Sbjct: 434 RGMDPHTHRPISAAAASG 487
Score = 122 bits (260), Expect = 9e-027
Identities = 57/138 (41%), Positives = 84/138 (60%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
V V ++A + +L LD RVP +LDL++ P +L RP V E+ V+LDDE+ V+GE +
Sbjct: 457 VRVRVHAAVEELALDVRVPVVLDLVVRPAGELPRYQRPLVAEEGVELDDELVVVVGEVAA 278
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
LEV ++V+P + L+A + G RAPAA+A+ V + L+LL GP PL + L+A
Sbjct: 277 LEVRAEVVHPAEAAALAAAEEAGGLGQRAPAALAVGLDVADQALVLLLGPSPLVGVRLLA 98
Query: 275 ARMPPHLNAMQNLGAPTK 222
AR PPH + G P +
Sbjct: 97 ARRPPHADDDAGYGGPAR 44
Score = 97.7 bits (207), Expect = 2e-019
Identities = 54/109 (49%), Positives = 61/109 (55%)
Frame = -3 / -2
Query: 667 APP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXX 488
+P +A++ G V GSMP S LM F FLISLSV PGSC AI DHL PR A
Sbjct: 489 SPLAAAALMGRCVCGSMPRLRSLRLMCVFQ*FLISLSVRPGSCPAINDHLLPRRAWSLMM 310
Query: 487 XXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
S P LRSG R*FI QL P PA+LG+E QQP P +M
Sbjct: 309 SSSSSSVKLPRLRSGRR*FIQRRRQLLPQRRRPAALGSERQQPSPWALM 163
Score = 53.3 bits (110), Expect = 5e-006
Identities = 41/126 (32%), Positives = 44/126 (34%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ RG GP RR T + A AAGA P A R G*T
Sbjct: 81 WGGRRAARRRTPTRGLGPRRRTSA*SATSRPTARAAGARCPRPPASSAAARAAASAG*TT 260
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKA 618
TS SP + S G RSR GTR S S A
Sbjct: 261 SALTSSAATSPTTTTSSSSSSTPSSATSGR**RGSSPAGRTTRSRTTGTRTSSASSSTAA 440
Query: 619 LIPTPT 636
T T
Sbjct: 441 WTRTRT 458
Score = 33.1 bits (66), Expect = 5.3
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQH 631
+QVV + AA R D DQE +E HQ +A RH H
Sbjct: 337 QQVVVDSGAAPRPDGQRDQELLEHAHQAQAPQPRHGPAH 453
>gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019G16f, mRNA sequence
Length = 624
Score = 233 bits (503), Expect = 3e-060
Identities = 86/138 (62%), Positives = 108/138 (78%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
+ MGR CC K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRW+
Sbjct: 74 IGMGRSPCCEKAHTNKGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWM 253
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
NYLRPDLKRG F D+++LII+LHA+LGN+WS IA QLPGRTDNEIKN WN+ IK+KL
Sbjct: 254 NYLRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLN 433
Query: 612 KGIDPNTHKPLTEADHGG 665
+G+DP+TH+P++ A G
Sbjct: 434 RGMDPHTHRPISAAAASG 487
Score = 122 bits (260), Expect = 9e-027
Identities = 57/138 (41%), Positives = 84/138 (60%)
Frame = -2 / -3
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
V V ++A + +L LD RVP +LDL++ P +L RP V E+ V+LDDE+ V+GE +
Sbjct: 457 VRVRVHAAVEELALDVRVPVVLDLVVRPAGELPRYQRPLVAEEGVELDDELVVVVGEVAA 278
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
LEV ++V+P + L+A + G RAPAA+A+ V + L+LL GP PL + L+A
Sbjct: 277 LEVRAEVVHPAEAAALAAAEEAGGLGQRAPAALAVGLDVADQALVLLLGPSPLVGVRLLA 98
Query: 275 ARMPPHLNAMQNLGAPTK 222
AR PPH + G P +
Sbjct: 97 ARRPPHADDDAGYGGPAR 44
Score = 97.7 bits (207), Expect = 2e-019
Identities = 54/109 (49%), Positives = 61/109 (55%)
Frame = -3 / -1
Query: 667 APP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXX 488
+P +A++ G V GSMP S LM F FLISLSV PGSC AI DHL PR A
Sbjct: 489 SPLAAAALMGRCVCGSMPRLRSLRLMCVFQ*FLISLSVRPGSCPAINDHLLPRRAWSLMM 310
Query: 487 XXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
S P LRSG R*FI QL P PA+LG+E QQP P +M
Sbjct: 309 SSSSSSVKLPRLRSGRR*FIQRRRQLLPQRRRPAALGSERQQPSPWALM 163
Score = 53.8 bits (111), Expect = 3e-006
Identities = 41/127 (32%), Positives = 45/127 (35%)
Frame = +1 / +3
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+ RG GP RR T + A AAGA P A R G*T
Sbjct: 81 WGGRRAARRRTPTRGLGPRRRTSA*SATSRPTARAAGARCPRPPASSAAARAAASAG*TT 260
Query: 439 *GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRKA 618
TS SP + S G RSR GTR S S A
Sbjct: 261 SALTSSAATSPTTTTSSSSSSTPSSATSGR**RGSSPAGRTTRSRTTGTRTSSASSSTAA 440
Query: 619 LIPTPTS 639
T T+
Sbjct: 441 WTRTRTA 461
Score = 33.1 bits (66), Expect = 5.3
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQH 631
+QVV + AA R D DQE +E HQ +A RH H
Sbjct: 337 QQVVVDSGAAPRPDGQRDQELLEHAHQAQAPQPRHGPAH 453
>gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004H07f, mRNA sequence
Length = 756
Score = 230 bits (496), Expect = 3e-059
Identities = 85/130 (65%), Positives = 105/130 (80%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K+ KG W+ EED++L+ +I +G GCW S+PK AGL RCGKSCRLRW+NY
Sbjct: 52 MGRSPCCEKEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNY 231
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F DE++LII LH++LGN+WS IA QLPGRTDNEIKN WN+ IK+KL +G
Sbjct: 232 LRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRG 411
Query: 618 IDPNTHKPLT 647
+DP+TH+PLT
Sbjct: 412 MDPHTHRPLT 441
Score = 118 bits (252), Expect = 1e-025
Identities = 58/136 (42%), Positives = 84/136 (61%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
V V ++A +L LD RVP +LDL++ P QL + RP V E +V+ DDE+ V+GE +
Sbjct: 429 VRVRVHAAGEELALDVRVPVVLDLVVRPARQLAGDERPLVAE*AVEADDELVLVVGEVAA 250
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
LEV ++V+P + L+A + G RAPAA+A+ V + L+LL GP PL +LL+A
Sbjct: 249 LEVGAEVVHPAEAAALAAAQQARRLGQRAPAALAVGPDVGDQPLVLLLGPRPLVGVLLLA 70
Query: 275 ARMPPHLNAMQNLGAP 228
AR PPH ++ AP
Sbjct: 69 ARRPPHAGRSDSILAP 22
Score = 88.6 bits (187), Expect = 1e-016
Identities = 51/103 (49%), Positives = 56/103 (54%)
Frame = -3 / -2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
+VSG V GSMP S LM F FLISLSVLPGS A+ DHL P S
Sbjct: 443 AVSGRCVCGSMPRERSLRLMCVFQ*FLISLSVLPGSWPAMRDHLLPSRLWRRMMSSSSSS 264
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P LRSG R*FI QL P PA+LG+E QQP P +M
Sbjct: 263 VKLPRLRSGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLALM 135
Score = 42.3 bits (86), Expect = 0.009
Identities = 29/95 (30%), Positives = 31/95 (32%)
Frame = +1 / +2
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXX 534
A AAGA P A R G*T TS SP
Sbjct: 149 ARAAGARCPRRRACCAAARAAASAG*TTSAPTSSAATSPTTRTSSSSASTAYSATSGLSS 328
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
SC+ G RSR GTR S S A T T+
Sbjct: 329 PASCRAGRTTRSRTTGTRTSSASSSPAAWTRTRTA 433
Score = 32.7 bits (65), Expect = 7.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQH 631
+QVVS+ AA +D DQE +E HQ +A RH H
Sbjct: 309 QQVVSHRRPAAGQDGQRDQELLEHAHQAQAPLPRHGPAH 425
>emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA
Length = 1102
Score = 230 bits (496), Expect = 3e-059
Identities = 85/130 (65%), Positives = 105/130 (80%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K+ KG W+ EED++L+ +I +G GCW S+PK AGL RCGKSCRLRW+NY
Sbjct: 44 MGRSPCCEKEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNY 223
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F DE++LII LH++LGN+WS IA QLPGRTDNEIKN WN+ IK+KL +G
Sbjct: 224 LRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRG 403
Query: 618 IDPNTHKPLT 647
+DP+TH+PLT
Sbjct: 404 MDPHTHRPLT 433
Score = 120 bits (256), Expect = 3e-026
Identities = 58/136 (42%), Positives = 84/136 (61%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
V V ++A +L LD RVP +LDL++ P QL + RP V E +V+ DDE+ V+GE +
Sbjct: 421 VRVRVHAAGEELALDVRVPVVLDLVVRPARQLAGDERPLVAEQAVEADDELVLVVGEVAA 242
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
LEV ++V+P + L+A + G RAPAA+A+ V + L+LL GP PL +LL+A
Sbjct: 241 LEVGAEVVHPAEAAALAAAQQARRLGQRAPAALAVGPDVGDQPLVLLLGPRPLVGVLLLA 62
Query: 275 ARMPPHLNAMQNLGAP 228
AR PPH ++ AP
Sbjct: 61 ARRPPHAGRSDSILAP 14
Score = 88.6 bits (187), Expect = 1e-016
Identities = 51/103 (49%), Positives = 56/103 (54%)
Frame = -3 / -2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
+VSG V GSMP S LM F FLISLSVLPGS A+ DHL P S
Sbjct: 435 AVSGRCVCGSMPRERSLRLMCVFQ*FLISLSVLPGSWPAMRDHLLPSRLWRRMMSSSSSS 256
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P LRSG R*FI QL P PA+LG+E QQP P +M
Sbjct: 255 VKLPRLRSGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLALM 127
Score = 41.8 bits (85), Expect = 0.013
Identities = 29/95 (30%), Positives = 31/95 (32%)
Frame = +1 / +3
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXX 534
A AAGA P A R G*T TS SP
Sbjct: 141 ARAAGARCPRRRACCAAARAAASAG*TTSAPTSSAATSPTTRTSSSSASTACSATSGLSS 320
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
SC+ G RSR GTR S S A T T+
Sbjct: 321 PASCRAGRTTRSRTTGTRTSSASSSPAAWTRTRTA 425
Score = 32.7 bits (65), Expect = 7.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQH 631
+QVVS+ AA +D DQE +E HQ +A RH H
Sbjct: 301 QQVVSHRRPAAGQDGQRDQELLEHAHQAQAPLPRHGPAH 417
>gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. vulgare cDNA clone HI05J08
5-PRIME, mRNA sequence
Length = 436
Score = 223 bits (482), Expect = 2e-057
Identities = 85/102 (83%), Positives = 93/102 (91%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
+QKLRKGLWSPEEDEKL NHI ++G GCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG
Sbjct: 131 QQKLRKGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 310
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 587
+F+Q EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNS
Sbjct: 311 SFSQQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNS 436
Score = 130 bits (278), Expect = 3e-029
Identities = 57/104 (54%), Positives = 73/104 (70%)
Frame = -2 / -1
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
VP +LDL++ P Q+RCNLRPPVP+D +Q DD V +L E P L+V Q+V PPQP L+
Sbjct: 433 VPEVLDLVVRPARQVRCNLRPPVPQDLMQADDGVLLLLREAPPLQVGAQVVDPPQPAALA 254
Query: 404 APLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAA 273
APL+ E G+ APA A+ V+ E L+LL PEPL+QLLL AA
Sbjct: 253 APLQTGELGHGAPAPDAVADDVVVELLVLLGRPEPLAQLLLDAA 122
Score = 93.2 bits (197), Expect = 5e-018
Identities = 44/77 (57%), Positives = 46/77 (59%)
Frame = -3 / -2
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F +FLISLSV PG AI DHLFPR +C P RSG R* IH S QL P
Sbjct: 432 FQKFLISLSVRPGK*DAICDHLFPRISCRPTMASSSCCEKLPRFRSGRR*LIHRSRQLLP 253
Query: 403 HL*SPASLGTELQQPWP 353
HL PASLGTELQ P P
Sbjct: 252 HLCRPASLGTELQHPTP 202
Score = 46.9 bits (96), Expect = 4e-004
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -1 / -3
Query: 450 GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASA 283
G + S ST+A +S RT +R W +SSS+ + C S PP+ TRAP +ASA
Sbjct: 299 GRGAGS*STAAGSSCRTSADRRAWARSSSTRRRSG*CGCRASRPPRETRAPCAASA 132
Score = 46.0 bits (94), Expect(2) = 3e-005
Identities = 27/54 (50%), Positives = 32/54 (59%)
Frame = +1 / +3
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
AA+SRS RGSG RR R+S T + A AGA P+S +GA R G GG T
Sbjct: 123 AASSRSCARGSGLPRRTRSSTTTSSATASGAGAPCPSSPVCRGAARAAGCGGST 284
Score = 44.6 bits (91), Expect = 0.002
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +2 / +1
Query: 284 AEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
AEA +GALV GG E + H+ +LEL +Q R +++VR+EL A VD+L
Sbjct: 133 AEAAQGALVSRGGREALQPHHPLRRRVLELRAQARRSAEVRQELPAAVDQL 285
Score = 22.6 bits (43), Expect(2) = 3e-005
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESME 583
EQVV++C + A D DQE +E
Sbjct: 364 EQVVADCISLAGPDGQRDQELLE 432
>gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019F08f, mRNA sequence
Length = 690
Score = 222 bits (479), Expect = 6e-057
Identities = 88/138 (63%), Positives = 102/138 (73%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L+KG W+ EEDEKL+ HI +HGHG W ++P AGLQRCGKSCRLRW NY
Sbjct: 23 MGRSPCCDKVGLKKGPWTTEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNY 202
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPD+KRG F+ EE II+LHA+LGNRWS IA L RTDNEIKN WN+ +KK+L + G
Sbjct: 203 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNYWNTHLKKRLAKMG 382
Query: 618 IDPNTHKPLTEADHGGAA 671
IDP THK A G AA
Sbjct: 383 IDPVTHKATNGAPAGTAA 436
Score = 107 bits (229), Expect = 2e-022
Identities = 59/146 (40%), Positives = 81/146 (55%)
Frame = -2 / -3
Query: 695 GSLGADGGSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
G+LG A S LVG G++ L LL+ VP +LDL++ P Q+ + RPPV
Sbjct: 460 GALGRSNVGRCACRSSVGGLVGDGVDPHLG*PLLEVGVPVVLDLVVGAPRQVCRDGRPPV 281
Query: 515 PEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVI 336
+ S++LDD +FF+ E L+V PQ+V P Q TL+APL+ G PA ++ML V
Sbjct: 280 AKKSMKLDDGLFFLQAELAPLDVRPQVVGPSQSATLAAPLQTGLGGQCTPAPVSMLLDVG 101
Query: 335 HEFLILLRGPEPLSQLLLVAARMPPH 258
+ L+LLR P Q LV A PH
Sbjct: 100 KKLLVLLRSPWAFLQANLVTAWRSPH 23
Score = 60.2 bits (125), Expect(2) = 6e-019
Identities = 29/60 (48%), Positives = 34/60 (56%)
Frame = -3 / -1
Query: 682 LMVGAAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 503
++ AA P A + LWV GS+P S FL F FLISLSV C A+ DHL PR A
Sbjct: 447 VLTSAAVPAGAPLVALWVTGSIPILASLFLRWVFQ*FLISLSVRLDRCVAMADHLLPRRA 268
Score = 55.1 bits (114), Expect(2) = 6e-019
Identities = 25/42 (59%), Positives = 26/42 (61%)
Frame = -3 / -1
Query: 466 NAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N PLL SG R* +HLSLQL PHL PA G Q P PC M
Sbjct: 231 NLPLLMSGRR*LVHLSLQLLPHLCKPALEGNARQLPCPCSSM 106
Score = 34.5 bits (69), Expect = 2.1
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1 / +3
Query: 535 QRSCQGGLIMRSRIYGTRASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPAT 711
+ +C+G RSR GT SRR * R P+PT L A + P+ P T
Sbjct: 300 RHTCRGAPTTRSRTTGTPTSRRG*PRWGSTPSPTRPPTELRQAQRPTLERPKAPASLTT 476
>gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019D12f, mRNA sequence
Length = 577
Score = 221 bits (477), Expect = 1e-056
Identities = 83/131 (63%), Positives = 104/131 (79%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR + L+KG W+ EEDEKLM++I KHGHG W ++P+LAGL RCGKSCRLRW NY
Sbjct: 84 MGRPPSSDENGLKKGPWTSEEDEKLMSYIQKHGHGSWRALPQLAGLNRCGKSCRLRWTNY 263
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
L+PD+KRG F+Q+EE I++LH VLGN+WS IA LPGRTDNEIKN WN+ ++KKL + G
Sbjct: 264 LKPDIKRGKFSQEEEQTILQLHTVLGNKWSAIAKHLPGRTDNEIKNFWNTHLRKKLIKMG 443
Query: 618 IDPNTHKPLTE 650
IDP TH+P T+
Sbjct: 444 IDPMTHRPRTD 476
Score = 147 bits (315), Expect = 2e-034
Identities = 64/103 (62%), Positives = 68/103 (66%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
SV G WV+GSMP +SFFL F +FLISLSV PG C AI DHL PRT C SW
Sbjct: 475 SVLGRWVIGSMPILMSFFLRWVFQKFLISLSVRPGRCFAIADHLLPRTVCSWRMVCSSSW 296
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
N PLL SG R* +HLSLQL PHL PAS G LQ PWPCF M
Sbjct: 295 ENFPLLMSGFR*LVHLSLQLLPHLFRPAS*GRALQLPWPCFWM 167
Score = 122 bits (260), Expect = 9e-027
Identities = 54/126 (42%), Positives = 79/126 (62%)
Frame = -2 / -3
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG I+A L +LL + VP +LDL++ P ++ C+ RP V +D VQL+D + F+LGE PS
Sbjct: 461 VGHWIDAHLDELLPEVGVPEVLDLVVCPSREVLCDSRPLVAKDGVQLEDGLLFLLGELPS 282
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
L+V Q+V P P L+ P++ + +PA+MAML V HE L+ L P L + +L+
Sbjct: 281 LDVRLQVVGPS*PAALTTPVQACKLRKGSPASMAMLLDVAHELLVFLTSPGALLEAILIT 102
Query: 275 ARMPPH 258
R PPH
Sbjct: 101 RRWPPH 84
Score = 74.4 bits (156), Expect = 2e-012
Identities = 48/127 (37%), Positives = 56/127 (44%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
+WGG L + R G +R+ R+S* T +SMAM AG F N G R G* G T
Sbjct: 82 QWGGHLLVMRMASRRAPGLVRKTRSS*ATSRSMAMEAGEPFLNLQA*TGVVRAAG*DGPT 261
Query: 436 I*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRK 615
* +TSREG SP Q + G RSR GT S RS R
Sbjct: 262 T*SRTSREGSSPRRKSKPSSSCTPSLATSGRLSQSTSLDGQTTRSRTSGTPTSGRSSSRW 441
Query: 616 ALIPTPT 636
A I PT
Sbjct: 442 ASIQ*PT 462
Score = 44.1 bits (90), Expect(2) = 2e-005
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +2 / +2
Query: 293 EKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
++G L *G E HE H +AWPW LE S T +V EL A++D+L E
Sbjct: 119 QEGPLD**GRREAHELHPEAWPWKLESPSSTCRPEQVW*ELQAKMDQLPE 268
Score = 42.8 bits (87), Expect = 0.007
Identities = 29/67 (43%), Positives = 34/67 (50%)
Frame = -1 / -2
Query: 459 LS*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASAC 280
LS* AS S S A +S+ T +V E SS HGHA C S* S P +R P +
Sbjct: 285 LS*CPASGSWSILACSSYHTCSGLQVEEGLSSFHGHASGCSS*ASRLPH*SRGPS*GHSH 106
Query: 279 SSKNASP 259
K ASP
Sbjct: 105 H*KVASP 85
Score = 24.9 bits (48), Expect(2) = 2e-005
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHP 634
+QVV A D DQE +E QEEA + H S P
Sbjct: 341 QQVVGYRKAPPWTDRQRDQELLEHPPQEEAHQDGHRSNDP 460
>gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024E22f, mRNA sequence
Length = 669
Score = 221 bits (477), Expect = 1e-056
Identities = 82/129 (63%), Positives = 102/129 (79%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 72 MGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 251
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F+ +E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ I++KL +G
Sbjct: 252 LRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRG 431
Query: 618 IDPNTHKPL 644
IDP TH+ +
Sbjct: 432 IDPVTHRAI 458
Score = 102 bits (218), Expect = 6e-021
Identities = 51/98 (52%), Positives = 55/98 (56%)
Frame = -3 / -3
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
WV GS+P +SF M F FLISLSVLPGS AI DHL PR SW P
Sbjct: 448 WVTGSIPRLVSFLRMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSSWLKLPR 269
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
LRSG R* I QL P PA+LG E QQP PC +M
Sbjct: 268 LRSGRR*LIQRRRQLLPQRSRPAALGRERQQPSPCALM 155
Score = 93.6 bits (198), Expect = 3e-018
Identities = 49/126 (38%), Positives = 73/126 (57%)
Frame = -2 / -2
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG ++ QL D RVP +LDL++ PP Q P V +++V+LDDE+ ++ E +
Sbjct: 449 VGHRVDPPARQLPPDVRVPVVLDLVVRPPRQSPGYQGPFVAQEAVELDDELVLLVAEVAA 270
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
LEV ++V P + L+A + G APAA+A+ V E ++LL GP L + L+A
Sbjct: 269 LEVGAEVVDPAEAAALAAAEQAGGLGQGAPAALAVRLDVGGEPVVLLLGPGALVGVRLLA 90
Query: 275 ARMPPH 258
AR PPH
Sbjct: 89 ARRPPH 72
Score = 40.0 bits (81), Expect(2) = 1e-004
Identities = 26/66 (39%), Positives = 28/66 (42%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RWGG AA R+ R GP RR S T + A AAGA P A R G T
Sbjct: 70 RWGGRRAARRRTPTRAPGPRRRTTGSPPTSRRTARAAGAPCPRPPACSAAARAAASAGST 249
Query: 436 I*GQTS 453
TS
Sbjct: 250 TSAPTS 267
Score = 34.5 bits (69), Expect = 2.1
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = -1 / -1
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+*G S S+ +S R+ +R W S+SS A C * PP +R P +
Sbjct: 270 A*GRGGGS*SSGGGSSCRSGAGRRPWAGSASSPRRAP*CRR*AGRPPPWSRRPCWCAPSR 91
Query: 276 SKNASPS 256
S SPS
Sbjct: 90 STATSPS 70
Score = 26.3 bits (51), Expect(2) = 1e-004
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAE 607
+Q+V + A ED DQE +E H EEA+
Sbjct: 329 QQMVPDSRETAGEDGQRDQELLEHAHPEEAD 421
>emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA
Length = 1284
Score = 221 bits (477), Expect = 1e-056
Identities = 82/129 (63%), Positives = 102/129 (79%)
Frame = +3 / +2
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 212 MGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 391
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F+ +E++LII+LH++LGN+WS IA +LPGRTDNEIKN WN+ I++KL +G
Sbjct: 392 LRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRG 571
Query: 618 IDPNTHKPL 644
IDP TH+ +
Sbjct: 572 IDPVTHRAI 598
Score = 105 bits (224), Expect = 9e-022
Identities = 52/98 (53%), Positives = 56/98 (57%)
Frame = -3 / -1
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
WV GS+P +SF M F FLISLSVLPGS AI DHLFPR SW P
Sbjct: 588 WVTGSIPRLVSFLRMCVFQ*FLISLSVLPGSLPAIRDHLFPRRLWSLMMSSSSSWLKLPR 409
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
LRSG R* I QL P PA+LG E QQP PC +M
Sbjct: 408 LRSGRR*LIQRRRQLLPQRSRPAALGRERQQPSPCALM 295
Score = 94.5 bits (200), Expect = 2e-018
Identities = 49/126 (38%), Positives = 73/126 (57%)
Frame = -2 / -3
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG ++ QL D RVP +LDL++ PP Q P V +++V+LDDE+ ++ E +
Sbjct: 589 VGHRVDPPARQLPPDVRVPVVLDLVVRPPRQSPGYQGPFVSQEAVELDDELVLLVAEVAA 410
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
LEV ++V P + L+A + G APAA+A+ V E ++LL GP L + L+A
Sbjct: 409 LEVGAEVVDPAEAAALAAAEQAGGLGQGAPAALAVRLDVGGESVVLLLGPGALVGVRLLA 230
Query: 275 ARMPPH 258
AR PPH
Sbjct: 229 ARRPPH 212
Score = 40.5 bits (82), Expect(2) = 1e-004
Identities = 26/66 (39%), Positives = 29/66 (43%)
Frame = +1 / +3
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RWGG AA R+ R GP RR +S T + A AAGA P A R G T
Sbjct: 210 RWGGRRAARRRTPTRAPGPRRRTTDSPPTSRRTARAAGAPCPRPPACSAAARAAASAGST 389
Query: 436 I*GQTS 453
TS
Sbjct: 390 TSAPTS 407
Score = 38.2 bits (77), Expect(2) = 6e-004
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2 / +1
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DGE +L + ++G L GG TH H A LL L +Q R + +R+EL +D+L
Sbjct: 211 DGEVAVLREGAHQQGRLDQGGGRPTHRLHQGARRGLLALPAQGRRPAPLRQELPPPLDQL 390
Score = 36.3 bits (73), Expect(2) = 0.51
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+*G S S+ +S R+ +R W S+SS A C *V PP +R P +
Sbjct: 410 A*GRGGGS*SSGGGSSCRSGAGRRPWAGSASSPRRAP*CRR*VGRPPPWSRRPCWCAPSR 231
Query: 276 SKNASPS 256
S SPS
Sbjct: 230 STATSPS 210
Score = 25.8 bits (50), Expect(2) = 6e-004
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 544 CQGGLIMRSRIYGTRASRRS* 606
C+GG RSR GTR S S*
Sbjct: 498 CRGGRTTRSRTTGTRTSGGS* 560
Score = 25.8 bits (50), Expect(2) = 1e-004
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAE 607
+Q+V + A ED DQE +E H EEA+
Sbjct: 469 KQMVPDSRETAGEDGQRDQELLEHAHPEEAD 561
Score = 22.1 bits (42), Expect(2) = 0.51
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -3 / -1
Query: 1951 GHAWQQLKVWGYLHVESYRHMHFCL 1877
GH Q + +LH+ +R ++F L
Sbjct: 1164 GHRRQDHHSFSFLHLSLFRSLYFHL 1090
>gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014M02f, mRNA sequence
Length = 771
Score = 217 bits (469), Expect = 1e-055
Identities = 83/131 (63%), Positives = 103/131 (78%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR K+ KG W+ EED++L+ +I +G GCW S+PK AGL RCGKSCRLRW+NY
Sbjct: 36 MGRSPG*EKEHTNKGAWTTEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNY 215
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLKRG F D ++LII LH++LGN+WS IA QLPGRTDNEIKN WN+ IK+KL +G
Sbjct: 216 LRPDLKRGNFTDD*DELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRG 395
Query: 618 IDPNTHKPLTE 650
+DPNTH+PLT+
Sbjct: 396 MDPNTHRPLTD 428
Score = 111 bits (237), Expect = 1e-023
Identities = 53/126 (42%), Positives = 77/126 (61%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+L LD RVP + DL++ P QL + RP V E +V DDE+ V+GE +LEV ++V+P
Sbjct: 383 ELALDVRVPVVFDLVVRPARQLAGDERPLVAE*AV*TDDELVLVVGEVAALEVGAEVVHP 204
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAM 246
+ L+A + G RAPAA+A+ V + L+LLRGP PL + L++AR PPH
Sbjct: 203 AEAAALAAAQQARRLGQRAPAALAVGPDVGDQPLVLLRGPRPLVGVFLLSARRPPHAGRS 24
Query: 245 QNLGAP 228
++ AP
Sbjct: 23 DSILAP 6
Score = 90.9 bits (192), Expect = 2e-017
Identities = 51/103 (49%), Positives = 57/103 (55%)
Frame = -3 / -3
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
SV+G V GS+P S LM F FLISLSVLPGS A+ DHL P C S
Sbjct: 427 SVNGRCVFGSIPRDRSLRLMCVFQ*FLISLSVLPGSWPAMRDHLLPSRLCRRMMSSS*SS 248
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
P LRSG R*FI QL P PA+LG+E QQP P +M
Sbjct: 247 VKLPRLRSGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLALM 119
Score = 39.6 bits (80), Expect = 0.062
Identities = 25/83 (30%), Positives = 27/83 (32%)
Frame = +1 / +1
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXX 534
A AAGA P A R G*T TS SP
Sbjct: 133 ARAAGARCPRRRACCAAARAAASAG*TTSAPTSSAATSPTTRTSSSSVYTAYSATSGLSS 312
Query: 535 QRSCQGGLIMRSRIYGTRASRRS 603
SC+ G RS+ GTR S S
Sbjct: 313 PASCRAGRTTRSKTTGTRTSSAS 381
>gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017M09f, mRNA sequence
Length = 656
Score = 215 bits (464), Expect = 7e-055
Identities = 82/127 (64%), Positives = 99/127 (77%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
+GR CC K +++G W+PEED KL+++IT+HG W +PK AGLQRCGKSCRLRW NY
Sbjct: 13 LGRIPCCEKDNVKRGQWTPEEDNKLLSYITQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 192
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
LRPDLK G F EE II+LH+V+GNRWS IAAQLPGRTDN++KN WN+ +KKKL G
Sbjct: 193 LRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLSGMG 372
Query: 618 IDPNTHK 638
IDP THK
Sbjct: 373 IDPITHK 393
Score = 116 bits (247), Expect = 6e-025
Identities = 55/125 (44%), Positives = 76/125 (60%)
Frame = -2 / -3
Query: 638 LVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECP 459
LV G++A QLLL+ VP +LD+++ P QL C+ RPPV +D VQLDD + + E
Sbjct: 393 LVRDGVDAHPGQLLLELGVPVVLDVVVRPAGQLGCDHRPPVADDGVQLDDGLLLGVSELA 214
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
LEV PQ+V PPQ L A L+P G+ AP A A+L V + ++ L P P ++L+
Sbjct: 213 VLEVGPQVVGPPQAAALPAALQPGVLGDEAPVARAVLRDVGEQLVVFLGRPLPALHVVLL 34
Query: 278 AARMP 264
AAR P
Sbjct: 33 AARDP 19
Score = 100 bits (213), Expect = 3e-020
Identities = 52/99 (52%), Positives = 56/99 (56%)
Frame = -3 / -1
Query: 637 LWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAP 458
L V+GSMP SFFL F FL SLSV PGS AAI DHL P T C + N+P
Sbjct: 392 LCVMGSMPIPDSFFLSLVFQWFLTSLSVRPGSWAAITDHLLPTTECSLMMVCSSASVNSP 213
Query: 457 LLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
LRSG R* +H QLFP SPA LG Q PC VM
Sbjct: 212 CLRSGRR*LVHRRRQLFPQRCSPAFLGMRRQLRVPCCVM 96
Score = 42.8 bits (87), Expect(2) = 1e-006
Identities = 27/70 (38%), Positives = 32/70 (45%)
Frame = +1 / +2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
W G LAA +* GSG R+ + T +S A A GA P + G A R GG T
Sbjct: 14 WAGSLAARRTT*SAGSGRPRKTTSCSPTSRSTARATGASSPRTPGCSAAGRAAACGGPTT 193
Query: 439 *GQTSREGHS 468
G TS S
Sbjct: 194 CGPTSSTASS 223
Score = 30.4 bits (60), Expect(2) = 1e-006
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQ 637
+QVV + S AAR D QE +E QEEA + H H Q
Sbjct: 270 QQVVGDRSPAARPDGQRRQEPLEHQAQEEAVRDGHRPHHAQ 392
>gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcription factor mRNA,
complete cds
Length = 1542
Score = 213 bits (459), Expect = 3e-054
Identities = 82/107 (76%), Positives = 94/107 (87%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
KLRKGLWSPEEDE+L+ ++ + G G WS V + AGLQRCGKSCRLRWINYLRPDLKRGAF
Sbjct: 176 KLRKGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAF 355
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
+ EEDLI+ LHA+LGNRWSQIAA+LPGRTDNEIKN WNS IKK+L+
Sbjct: 356 SPHEEDLIVNLHAILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLK 496
Score = 97.3 bits (206), Expect = 3e-019
Identities = 47/106 (44%), Positives = 65/106 (61%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
Q LLD VP +LDL++ P C+LRP V ED V++DDEV + E +LEV ++V P
Sbjct: 493 QPLLDGGVPEVLDLVVGAPR*PGCDLRPSVAEDGVEVDDEVLLMWREGAALEVRTEVVDP 314
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
P+ L+APL P + AP + +V H+ L+LLR P+PL QL
Sbjct: 313 PEAAALAAPL*PGVACHVAPRPLTAPQHVRHKPLVLLRRPQPLPQL 176
Score = 90.4 bits (191), Expect = 3e-017
Identities = 46/87 (52%), Positives = 49/87 (56%)
Frame = -3 / -1
Query: 613 FCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR* 434
F S FLM EF +FLISLSV PG+ AAI*DHL PR A AP LRSG R*
Sbjct: 501 FIFSRFLMVEFQKFLISLSVRPGNLAAI*DHLLPRMAWRLTMRSSSCGEKAPRLRSGRR* 322
Query: 433 FIHLSLQLFPHL*SPASLGTELQQPWP 353
IH QL PH +PA T L P P
Sbjct: 321 LIHRRRQLLPHRCNPALRATSLHDP*P 241
>gb|BJ462569.1|BJ462569 BJ462569 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29d04 5', mRNA sequence
Length = 642
Score = 122 bits (260), Expect(5) = 1e-053
Identities = 52/72 (72%), Positives = 56/72 (77%)
Frame = +3 / +2
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+FAE TT MQNQSQ+LYDDVIKAESQFN+EGICASWF A DMYDKDLQRM
Sbjct: 188 TFAEATTAMQNQSQSLYDDVIKAESQFNMEGICASWFQNQQPQQQLQAASDMYDKDLQRM 367
Query: 1515 QLSFENI*ALCS 1550
LSFE+I* LCS
Sbjct: 368 PLSFEHI*VLCS 403
Score = 120 bits (257), Expect(5) = 9e-047
Identities = 50/76 (65%), Positives = 61/76 (80%)
Frame = +1 / +3
Query: 1330 LTPLPKRPQSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCK 1509
+ PL ++PQ CRTRA + MM*S+QRA+ST +GYVLLGSRISS SNSC+ HQTCM +T K
Sbjct: 183 MEPLQRQPQRCRTRASHYTMM*SKQRASSTWRGYVLLGSRISSRSNSCKQHQTCMIKTYK 362
Query: 1510 ECNYLLRISRHYVPPH 1557
EC LL ISR+YV P+
Sbjct: 363 ECPCLLSISRYYVLPY 410
Score = 116 bits (247), Expect(6) = 2e-052
Identities = 52/73 (71%), Positives = 55/73 (75%)
Frame = -3 / -1
Query: 1555 VVEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SV 1376
+ EH+ *I SKD ILCKSLSYMS A *FWNQEAHIPSMLNWLSALITSS S
Sbjct: 408 MAEHST*ICSKDKGILCKSLSYMSDAACSCCCGC*FWNQEAHIPSMLNWLSALITSSYSD 229
Query: 1375 WLWFCMTVVVSAK 1337
WLWFC+ VV SAK
Sbjct: 228 WLWFCIAVVASAK 190
Score = 106 bits (227), Expect(3) = 8e-031
Identities = 45/73 (61%), Positives = 49/73 (67%)
Frame = +2 / +1
Query: 1337 LCRNDHSHAEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNA 1516
LCR +HS AEPEP + *CDQ REP+QH DMCFLVPES S RHV* L KNA
Sbjct: 190 LCRGNHSDAEPEPVTIR*CDQSREPVQHGGDMCFLVPESAAAATAASSIRHV**RLTKNA 369
Query: 1517 TIF*EYLGIMFHH 1555
+F* YLG MF H
Sbjct: 370 LVF*AYLGTMFCH 408
Score = 96.8 bits (205), Expect(6) = 1e-040
Identities = 46/77 (59%), Positives = 50/77 (64%)
Frame = -1 / -2
Query: 1566 LCSMWWNIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHH 1387
L +W NI+PRY+QK AFF S HTCL+L ADSGTKKHIS C* GSL *SHH
Sbjct: 419 LLHVWQNIVPRYAQKTRAFFVSLYHTCLMLLAAVAAAADSGTKKHISPPC*TGSLL*SHH 240
Query: 1386 HKAFGSGSA*LWSFRQR 1336
GSGSA LW QR
Sbjct: 239 RIVTGSGSASLWLPLQR 189
Score = 89.0 bits (188), Expect(4) = 2e-028
Identities = 44/73 (60%), Positives = 48/73 (65%)
Frame = -2 / -3
Query: 1553 GGT*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRL 1374
G T* LD+LKR HSL V +IHV C LEPRSTYP +VELALC DHII+ L
Sbjct: 406 GRT*YLDMLKRQGHSL*VFIIHV*CCLQLLLRLLILEPRSTYPLHVELALCFDHIIV**L 227
Query: 1373 ALVLHDCGRFGKG 1335
ALVLH CG KG
Sbjct: 226 ALVLHRCGCLCKG 188
Score = 54.7 bits (113), Expect(5) = 1e-053
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 1170 NPXXXXXXXXXXXXXXXFEPQSTSTILENSVFPWTDIG 1283
NP FEPQST++ILENSVFPWTDIG
Sbjct: 5 NPSSSGSTGSSGSNSMGFEPQSTNSILENSVFPWTDIG 118
Score = 47.3 bits (97), Expect(6) = 2e-052
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 1282 PMSVHGKTLFSRIVLVLCGSNPI 1214
P+SVHG TLFSRI VLCGSNP+
Sbjct: 117 PISVHGNTLFSRIEFVLCGSNPM 49
Score = 45.5 bits (93), Expect(6) = 1e-040
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -2 / -3
Query: 1283 SNVCPWEDTVLQNCARALWFKSHTV 1209
S++CPWE TVLQN RALW + H V
Sbjct: 118 SDICPWEYTVLQN*VRALWLEPHAV 44
Score = 45.5 bits (93), Expect(5) = 9e-047
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 1210 TVWDLNHRARAQFWRTVSSHGQ 1275
T W +HRAR QFWRTV SHGQ
Sbjct: 45 TAWGSSHRARTQFWRTVYSHGQ 110
Score = 44.1 bits (90), Expect(6) = 2e-052
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = -2 / -2
Query: 1784 QEKGKETLEHTFLCILLQLLMPGLSFP*YCQLFN*G 1677
+ K +ET E TFLC L+ LLM LSFP +C +F+ G
Sbjct: 638 KRKERETPECTFLCNLMPLLMTELSFPWHCMIFSRG 531
Score = 42.8 bits (87), Expect(4) = 2e-028
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -1 / -2
Query: 1299 LYLFLVQCLSMGRHCSPELCSCSVVQIP 1216
L+L ++ LSMG HCSPEL SCSV + P
Sbjct: 134 LFLAQLRYLSMGIHCSPELSSCSVARTP 51
Score = 42.8 bits (87), Expect(3) = 8e-031
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2 / +1
Query: 1217 GI*TTEHEHNSGEQCLPMDRH 1279
G+ TEHE NSGEQC+PMDR+
Sbjct: 52 GVRATEHELNSGEQCIPMDRY 114
Score = 41.8 bits (85), Expect(5) = 1e-053
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 1278 IGQEKDTRAHLVAELKWPD 1334
+GQEKDTR LV ELKWPD
Sbjct: 119 VGQEKDTRVQLVEELKWPD 175
Score = 41.4 bits (84), Expect(5) = 1e-053
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 1676 FLS*RAGNIKERTALALEVAAGCIGKYVLESPFLS 1780
FL *R+ + E+ L+ VA+ C KY+LESPFLS
Sbjct: 530 FLG*RSCSATEKITLSSGVASNCTEKYILESPFLS 634
Score = 38.6 bits (78), Expect(5) = 9e-047
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1 / +1
Query: 1675 VPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFPF 1779
+P+LK Q GKD+ IRS ++HRKV S VS F
Sbjct: 529 LPRLKIMQCHGKDNSVIRSGIKLHRKVHSGVSLSF 633
Score = 38.2 bits (77), Expect(6) = 2e-052
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 1336 ESGHLSSATR*ALVSFSCPMSV 1271
+SGHLSS+T * LVSFSCP +
Sbjct: 177 KSGHLSSSTN*TLVSFSCPTPI 112
Score = 35.4 bits (71), Expect(6) = 1e-040
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -1 / -1
Query: 1788 FSRERKGDSRTYFPMHPAATSNARAVLSLIL 1696
F ERKGDSR YF + AT + R + S+ L
Sbjct: 642 FEEERKGDSRMYFSVQFDATPDDRVIFSVAL 550
Score = 32.7 bits (65), Expect(5) = 9e-047
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 1274 RHWTRKRYKGSPSSGT*VA*LLCRN 1348
R W RKRY+ S S GT VA*L N
Sbjct: 115 RSWARKRYQSSVSGGTQVA*LASWN 189
Score = 31.8 bits (63), Expect(6) = 1e-040
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -1 / -2
Query: 1356 LWSFRQRSQAT*VPLLGEPLYLFLVQ 1279
L F + SQAT*VP L E YLFL Q
Sbjct: 197 LQRFHEASQAT*VPPLTELWYLFLAQ 120
Score = 27.6 bits (54), Expect(4) = 2e-028
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 1340 KGVRPLKFRY*VSPCIFFLSN 1278
K VRPL+F +*++ IFFL N
Sbjct: 181 KQVRPLEFLH*LNSGIFFLPN 119
Score = 26.7 bits (52), Expect(6) = 2e-052
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 1590 RVSASSDLLCSMW 1552
+VSAS+DLLCSM+
Sbjct: 445 QVSASADLLCSMY 407
Score = 26.3 bits (51), Expect(5) = 1e-053
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3 / +1
Query: 1554 TWNRADQKKQKLV 1592
TW+RADQ+K +LV
Sbjct: 409 TWSRADQQKLRLV 447
Score = 26.3 bits (51), Expect(6) = 2e-052
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 1670 VEDDFCINLTYLCEQ 1626
VE D+CINL YL Q
Sbjct: 525 VEVDYCINLAYLSMQ 481
Score = 25.4 bits (49), Expect(6) = 1e-040
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 1675 QLWRMISVST*RIYV 1631
+LWR+I+VST IY+
Sbjct: 530 RLWRLITVSTSHIYL 486
Score = 24.9 bits (48), Expect(5) = 9e-047
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 1553 HMEQSRSEEAET 1588
+MEQSRS EAET
Sbjct: 408 YMEQSRSAEAET 443
Score = 23.5 bits (45), Expect(6) = 1e-040
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / -1
Query: 1580 LLLICSVPC 1554
LLLICS PC
Sbjct: 435 LLLICSAPC 409
Score = 23.5 bits (45), Expect(3) = 8e-031
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1 / +3
Query: 1279 LDKKKIQGLT**RNLSGLT 1335
L KKKI +* RN SGLT
Sbjct: 120 LGKKKIPEFS*WRNSSGLT 176
Score = 22.6 bits (43), Expect(4) = 2e-028
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 1671 CGG*FLYQLNVSM 1633
CGG* LYQ +S+
Sbjct: 526 CGG*LLYQPRISI 488
>gb|BF624687.2|BF624687 HVSMEa0017H14f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0017H14f, mRNA sequence
Length = 876
Score = 122 bits (260), Expect(5) = 9e-051
Identities = 52/72 (72%), Positives = 56/72 (77%)
Frame = +3 / +3
Query: 1335 SFAETTTVMQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRM 1514
+FAE TT MQNQSQ+LYDDVIKAESQFN+EGICASWF A DMYDKDLQRM
Sbjct: 117 TFAEATTAMQNQSQSLYDDVIKAESQFNMEGICASWFQNQQPQQQLQAASDMYDKDLQRM 296
Query: 1515 QLSFENI*ALCS 1550
LSFE+I* LCS
Sbjct: 297 PLSFEHI*VLCS 332
Score = 120 bits (257), Expect(5) = 6e-044
Identities = 50/76 (65%), Positives = 61/76 (80%)
Frame = +1 / +1
Query: 1330 LTPLPKRPQSCRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCK 1509
+ PL ++PQ CRTRA + MM*S+QRA+ST +GYVLLGSRISS SNSC+ HQTCM +T K
Sbjct: 112 MEPLQRQPQRCRTRASHYTMM*SKQRASSTWRGYVLLGSRISSRSNSCKQHQTCMIKTYK 291
Query: 1510 ECNYLLRISRHYVPPH 1557
EC LL ISR+YV P+
Sbjct: 292 ECPCLLSISRYYVLPY 339
Score = 116 bits (247), Expect(6) = 3e-052
Identities = 52/73 (71%), Positives = 55/73 (75%)
Frame = -3 / -3
Query: 1555 VVEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SV 1376
+ EH+ *I SKD ILCKSLSYMS A *FWNQEAHIPSMLNWLSALITSS S
Sbjct: 337 MAEHST*ICSKDKGILCKSLSYMSDAACSCCCGC*FWNQEAHIPSMLNWLSALITSSYSD 158
Query: 1375 WLWFCMTVVVSAK 1337
WLWFC+ VV SAK
Sbjct: 157 WLWFCIAVVASAK 119
Score = 106 bits (227), Expect(3) = 2e-027
Identities = 45/73 (61%), Positives = 49/73 (67%)
Frame = +2 / +2
Query: 1337 LCRNDHSHAEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNA 1516
LCR +HS AEPEP + *CDQ REP+QH DMCFLVPES S RHV* L KNA
Sbjct: 119 LCRGNHSDAEPEPVTIR*CDQSREPVQHGGDMCFLVPESAAAATAASSIRHV**RLTKNA 298
Query: 1517 TIF*EYLGIMFHH 1555
+F* YLG MF H
Sbjct: 299 LVF*AYLGTMFCH 337
Score = 96.8 bits (205), Expect(5) = 8e-035
Identities = 46/77 (59%), Positives = 50/77 (64%)
Frame = -1 / -1
Query: 1566 LCSMWWNIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHH 1387
L +W NI+PRY+QK AFF S HTCL+L ADSGTKKHIS C* GSL *SHH
Sbjct: 348 LLHVWQNIVPRYAQKTRAFFVSLYHTCLMLLAAVAAAADSGTKKHISPPC*TGSLL*SHH 169
Query: 1386 HKAFGSGSA*LWSFRQR 1336
GSGSA LW QR
Sbjct: 168 RIVTGSGSASLWLPLQR 118
Score = 89.0 bits (188), Expect(4) = 7e-026
Identities = 44/73 (60%), Positives = 48/73 (65%)
Frame = -2 / -2
Query: 1553 GGT*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRL 1374
G T* LD+LKR HSL V +IHV C LEPRSTYP +VELALC DHII+ L
Sbjct: 335 GRT*YLDMLKRQGHSL*VFIIHV*CCLQLLLRLLILEPRSTYPLHVELALCFDHIIV**L 156
Query: 1373 ALVLHDCGRFGKG 1335
ALVLH CG KG
Sbjct: 155 ALVLHRCGCLCKG 117
Score = 61.1 bits (127), Expect(6) = 3e-052
Identities = 28/63 (44%), Positives = 39/63 (61%)
Frame = -2 / -1
Query: 1865 IYLISTRENKNSNMQKFSRVQKENINFQEKGKETLEHTFLCILLQLLMPGLSFP*YCQLF 1686
+ + TRE++ S QK S + +F E+ KET E TFLC L+ LLM LSFP +C +F
Sbjct: 648 VNFLKTRESQKSKFQKLSCRDRRYQHFLEERKETPECTFLCNLMPLLMTELSFPWHCMIF 469
Query: 1685 N*G 1677
+ G
Sbjct: 468 SRG 460
Score = 49.2 bits (101), Expect(5) = 9e-051
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +1 / +2
Query: 1675 VPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFPFS*KLMFSFCTRLNFCIFEFLFSLV 1851
+P+LK Q GKD+ IRS ++HRKV S VSF S K + +LNF +F SLV
Sbjct: 458 LPRLKIMQCHGKDNSVIRSGIKLHRKVHSGVSFLSSKKC*YLLSRQLNFWNLDFCDSLV 634
Score = 42.3 bits (86), Expect(5) = 6e-044
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2 / +3
Query: 1676 FLS*RAGNIKERTALALEVAAGCIGKYVLESPFLSLEN 1789
FL *R+ + E+ L+ VA+ C KY+LESPF L+N
Sbjct: 459 FLG*RSCSATEKITLSSGVASNCTEKYILESPFFPLKN 572
Score = 41.8 bits (85), Expect(5) = 9e-051
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +3 / +3
Query: 1278 IGQEKDTRAHLVAELKWPD 1334
+GQEKDTR LV ELKWPD
Sbjct: 48 VGQEKDTRVQLVEELKWPD 104
Score = 38.2 bits (77), Expect(6) = 3e-052
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -3 / -3
Query: 1336 ESGHLSSATR*ALVSFSCPMSV 1271
+SGHLSS+T * LVSFSCP +
Sbjct: 106 KSGHLSSSTN*TLVSFSCPTPI 41
Score = 38.2 bits (77), Expect(5) = 8e-035
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -1 / -3
Query: 1851 HQREQKLKYAKVQSCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLIL 1696
+QR K++ KV+ + F R +KGDSR YF + AT + R + S+ L
Sbjct: 634 NQRVTKIQVPKVELS*QKISTFFRGKKGDSRMYFSVQFDATPDDRVIFSVAL 479
Score = 36.8 bits (74), Expect(5) = 9e-051
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3 / +3
Query: 1239 STILENSVFPWTDIG 1283
++ILENSVFPWTDIG
Sbjct: 3 NSILENSVFPWTDIG 47
Score = 36.3 bits (73), Expect(4) = 7e-026
Identities = 25/58 (43%), Positives = 28/58 (48%)
Frame = -3 / -2
Query: 1849 PERTKTQICKSSVVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEE 1676
PE K KS V +IF RKERRL N+L A C+ * Q F A S EE
Sbjct: 632 PESHKNPSSKS*AVVTEDINIF*RKERRLQNVLFCAI*CHS**QSYLFRGTA*SLAEE 459
Score = 32.7 bits (65), Expect(5) = 6e-044
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 1274 RHWTRKRYKGSPSSGT*VA*LLCRN 1348
R W RKRY+ S S GT VA*L N
Sbjct: 44 RSWARKRYQSSVSGGTQVA*LASWN 118
Score = 32.2 bits (64), Expect(5) = 6e-044
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / +2
Query: 1238 EHNSGEQCLPMDRH 1279
E NSGEQC+PMDR+
Sbjct: 2 ELNSGEQCIPMDRY 43
Score = 31.8 bits (63), Expect(6) = 3e-052
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1 / -1
Query: 1299 LYLFLVQCLSMGRHCSPELCS 1237
L+L ++ LSMG HCSPEL S
Sbjct: 63 LFLAQLRYLSMGIHCSPELSS 1
Score = 31.8 bits (63), Expect(5) = 8e-035
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -1 / -1
Query: 1356 LWSFRQRSQAT*VPLLGEPLYLFLVQ 1279
L F + SQAT*VP L E YLFL Q
Sbjct: 126 LQRFHEASQAT*VPPLTELWYLFLAQ 49
Score = 31.3 bits (62), Expect(3) = 2e-027
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 1237 RAQFWRTVSSHGQ 1275
R QFWRTV SHGQ
Sbjct: 1 RTQFWRTVYSHGQ 39
Score = 30.9 bits (61), Expect(5) = 8e-035
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 1283 SNVCPWEDTVLQN 1245
S++CPWE TVLQN
Sbjct: 47 SDICPWEYTVLQN 9
Score = 29.5 bits (58), Expect(4) = 7e-026
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / -3
Query: 1282 PMSVHGKTLFSRI 1244
P+SVHG TLFSRI
Sbjct: 46 PISVHGNTLFSRI 8
Score = 27.6 bits (54), Expect(4) = 7e-026
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2 / -2
Query: 1340 KGVRPLKFRY*VSPCIFFLSN 1278
K VRPL+F +*++ IFFL N
Sbjct: 110 KQVRPLEFLH*LNSGIFFLPN 48
Score = 26.7 bits (52), Expect(6) = 3e-052
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1 / -2
Query: 1590 RVSASSDLLCSMW 1552
+VSAS+DLLCSM+
Sbjct: 374 QVSASADLLCSMY 336
Score = 26.3 bits (51), Expect(5) = 9e-051
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3 / +2
Query: 1554 TWNRADQKKQKLV 1592
TW+RADQ+K +LV
Sbjct: 338 TWSRADQQKLRLV 376
Score = 24.9 bits (48), Expect(5) = 6e-044
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 1553 HMEQSRSEEAET 1588
+MEQSRS EAET
Sbjct: 337 YMEQSRSAEAET 372
Score = 24.4 bits (47), Expect(6) = 3e-052
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 1670 VEDDFCINLTYLCEQ 1626
V+ D+CINL YL Q
Sbjct: 454 VKVDYCINLAYLSMQ 410
Score = 23.5 bits (45), Expect(5) = 8e-035
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / -3
Query: 1580 LLLICSVPC 1554
LLLICS PC
Sbjct: 364 LLLICSAPC 338
Score = 23.5 bits (45), Expect(3) = 2e-027
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1 / +1
Query: 1279 LDKKKIQGLT**RNLSGLT 1335
L KKKI +* RN SGLT
Sbjct: 49 LGKKKIPEFS*WRNSSGLT 105
>gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005B14f, mRNA sequence
Length = 935
Score = 206 bits (444), Expect = 4e-052
Identities = 77/117 (65%), Positives = 97/117 (82%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI +HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 126 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHRHGHGNWRALPKQAGLLRCGKSCRLRWIN 305
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 306 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 476
Score = 120 bits (257), Expect = 2e-026
Identities = 56/115 (48%), Positives = 73/115 (63%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 470 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 291
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L+AP KP G RAP A+A+ V + L+LLR P P Q L+AAR PPHL
Sbjct: 290 PAALAAPQKPGLLGQRAPVAVAVPVDVCDQDLVLLRRPGPPLQAHLLAARRPPHL 126
Score = 95.0 bits (201), Expect = 1e-018
Identities = 48/88 (54%), Positives = 50/88 (56%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 475 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 296
Query: 424 LSLQLFPHL*SPASLGTELQQPWPCFVM 341
S QL PH SPA LG+ Q PWPC M
Sbjct: 295 RSRQLLPHRRSPACLGSARQLPWPCLWM 212
Score = 48.7 bits (100), Expect = 1e-004
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = -1 / -3
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G A C S PP +RAP S + S
Sbjct: 315 AAGS*STGAGSSCRTAEARLAWAARASCRGRACGCVRPGSCPPPASRAPSSGPSSRSTAP 136
Query: 264 SPSQRN 247
SPS R+
Sbjct: 135 SPSSRS 118
Score = 43.7 bits (89), Expect(2) = 4e-005
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +2 / +2
Query: 251 R*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVD 430
R DGE +L + E+GAL GG + +H +A P L +Q AS VR+EL A VD
Sbjct: 122 REDGEGAVLREDGPEEGALDAGGGQDPGRTHPQARPRQLARAAQASRASAVRQELPAPVD 301
Query: 431 KL 436
+L
Sbjct: 302 QL 307
Score = 24.4 bits (47), Expect(2) = 4e-005
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1 / +1
Query: 544 CQGGLIMRSRIYGTRASR 597
C+GG RSR GT SR
Sbjct: 415 CRGGRTTRSRTCGTPTSR 468
>gb|BF618630.2|BF618630 HVSMEc0006O07f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0006O07f, mRNA sequence
Length = 556
Score = 171 bits (368), Expect(3) = 6e-052
Identities = 63/80 (78%), Positives = 76/80 (95%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K++L++GLWSPEED KLMNHI K+G+GCWSSVPK+AGL+RCGKSCRLRWINYLRPDLKRG
Sbjct: 141 KKRLKRGLWSPEED*KLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINYLRPDLKRG 320
Query: 462 AFAQDEEDLIIELHAVLGNR 521
AF+Q+EEDLII LH++L N+
Sbjct: 321 AFSQEEEDLIIHLHSILRNK 380
Score = 98.7 bits (209), Expect(2) = 5e-026
Identities = 47/98 (47%), Positives = 59/98 (60%)
Frame = -2 / -3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V ED V+++DEV +L E LEV PQ+VYPPQP L APLK G+ APAA+A+L V
Sbjct: 377 VAEDGVEVNDEVLLLLREGAPLEVRPQVVYPPQPAALPAPLKACNLGDGAPAAVAVLGNV 198
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLGAPT 225
+H+ L+LLR PE Q LL +R H PT
Sbjct: 197 VHQLLVLLRRPEAALQPLLRPSRPLRHAAGRLRRHEPT 84
Score = 76.7 bits (161), Expect(2) = 9e-017
Identities = 34/41 (82%), Positives = 34/41 (82%)
Frame = -3 / -1
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
APLLRSGLR*FIHLSLQLFPHL PA LGTELQQP P M
Sbjct: 322 APLLRSGLR*FIHLSLQLFPHLSRPAILGTELQQPLPYLAM 200
Score = 64.8 bits (135), Expect = 2e-009
Identities = 38/84 (45%), Positives = 46/84 (54%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
S*G AS SLSTSA +S RT + + W +SSSS C S S PP TR SAS+ S
Sbjct: 315 S*GPASGSLSTSACSSSRTSQGLQSWGRSSSSRCRTWQCGSSASSPPPATRGRASASSSS 136
Query: 276 SKNASPSQRNAEPGSSNQTHRAYR 205
AS +R A+ +N RA R
Sbjct: 135 LPAASTCRRPAKTTRTNAQWRAVR 64
Score = 51.0 bits (105), Expect = 2e-005
Identities = 30/57 (52%), Positives = 33/57 (57%)
Frame = +1 / +1
Query: 286 RS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSR 456
R * SG RR R+ * T S A AAGA P +GA R G*GG*T *G+TSR
Sbjct: 145 RG*SAASGRRRRTRS**TTLPSTATAAGAPSPRLQALRGAGRAAG*GG*TT*GRTSR 315
Score = 48.7 bits (100), Expect(3) = 6e-052
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKN 575
RWSQIAAQLPGRTDNE+KN
Sbjct: 379 RWSQIAAQLPGRTDNEVKN 435
Score = 40.9 bits (83), Expect = 0.024
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +2 / +2
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKLSE 442
+ EAE LV GG E E H + LLEL Q +VR+EL AEVDKL E
Sbjct: 140 EEEAEARPLVAGGGLEADEPHCQVRQRLLELRPQDCRP*EVREELQAEVDKLPE 301
Score = 40.5 bits (82), Expect(2) = 5e-026
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -3 / -3
Query: 577 RFLISLSVLPGSCAAI*DHL 518
+FL SLSV PGSCAAI*DHL
Sbjct: 437 KFLTSLSVRPGSCAAI*DHL 378
Score = 31.3 bits (62), Expect(2) = 9e-017
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 575 ILDLIISPPWQLRCNLRPP 519
+LDL++ P QLR +LRPP
Sbjct: 435 VLDLVVGTPGQLRGDLRPP 379
Score = 24.4 bits (47), Expect(3) = 6e-052
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 570 KNLWNSCIKKKLRQKGI 620
+ L NS IKKKLR G+
Sbjct: 429 QELLNSLIKKKLRSAGL 479
>gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018B03f, mRNA sequence
Length = 609
Score = 205 bits (442), Expect = 7e-052
Identities = 77/117 (65%), Positives = 96/117 (82%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 127 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWIN 306
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 307 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 477
Score = 121 bits (259), Expect = 1e-026
Identities = 56/115 (48%), Positives = 73/115 (63%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 471 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 292
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L+AP KP G RAP A+A+ V + L+LLR P P Q L+AAR PPHL
Sbjct: 291 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLVLLRRPGPPLQAHLLAARRPPHL 127
Score = 90.0 bits (190), Expect = 4e-017
Identities = 46/84 (54%), Positives = 48/84 (57%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 476 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 297
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 296 RSRQLLPHRRSPACLGSARQLPWP 225
Score = 46.9 bits (96), Expect = 4e-004
Identities = 26/66 (39%), Positives = 33/66 (50%)
Frame = -1 / -3
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G C S PP +RAP S + S
Sbjct: 316 AAGS*STGAGSSCRTAEARLAWAARASCRGRGCGCVRPGSCPPPASRAPSSGPSSRSTAP 137
Query: 264 SPSQRN 247
SPS R+
Sbjct: 136 SPSSRS 119
Score = 41.4 bits (84), Expect(2) = 2e-004
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +2 / +3
Query: 251 R*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVD 430
R DGE +L + E+GAL GG + +H + P L +Q AS VR+EL A VD
Sbjct: 123 REDGEGAVLREDGPEEGALDAGGGQDPGRTHPQPRPRQLARAAQASRASAVRQELPAPVD 302
Query: 431 KL 436
+L
Sbjct: 303 QL 308
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1 / +2
Query: 544 CQGGLIMRSRIYGTRASR 597
C+GG RSR GT SR
Sbjct: 416 CRGGRTTRSRTCGTPTSR 469
>gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024H06f, mRNA sequence
Length = 906
Score = 205 bits (442), Expect = 7e-052
Identities = 77/117 (65%), Positives = 96/117 (82%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 122 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWIN 301
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 302 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 472
Score = 121 bits (259), Expect = 1e-026
Identities = 56/115 (48%), Positives = 73/115 (63%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 466 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 287
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L+AP KP G RAP A+A+ V + L+LLR P P Q L+AAR PPHL
Sbjct: 286 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLVLLRRPGPPLQAHLLAARRPPHL 122
Score = 90.0 bits (190), Expect = 4e-017
Identities = 46/84 (54%), Positives = 48/84 (57%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 471 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 292
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 291 RSRQLLPHRRSPACLGSARQLPWP 220
Score = 46.9 bits (96), Expect = 4e-004
Identities = 26/66 (39%), Positives = 33/66 (50%)
Frame = -1 / -2
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G C S PP +RAP S + S
Sbjct: 311 AAGS*STGAGSSCRTAEARLAWAARASCRGRGCGCVRPGSCPPPASRAPSSGPSSRSTAP 132
Query: 264 SPSQRN 247
SPS R+
Sbjct: 131 SPSSRS 114
Score = 41.4 bits (84), Expect(2) = 2e-004
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +2 / +1
Query: 251 R*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVD 430
R DGE +L + E+GAL GG + +H + P L +Q AS VR+EL A VD
Sbjct: 118 REDGEGAVLREDGPEEGALDAGGGQDPGRTHPQPRPRQLARAAQASRASAVRQELPAPVD 297
Query: 431 KL 436
+L
Sbjct: 298 QL 303
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1 / +3
Query: 544 CQGGLIMRSRIYGTRASR 597
C+GG RSR GT SR
Sbjct: 411 CRGGRTTRSRTCGTPTSR 464
>gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018A12f, mRNA sequence
Length = 777
Score = 205 bits (442), Expect = 7e-052
Identities = 77/117 (65%), Positives = 96/117 (82%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 112 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWIN 291
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 292 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 462
Score = 121 bits (259), Expect = 1e-026
Identities = 56/115 (48%), Positives = 73/115 (63%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 456 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 277
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L+AP KP G RAP A+A+ V + L+LLR P P Q L+AAR PPHL
Sbjct: 276 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLVLLRRPGPPLQAHLLAARRPPHL 112
Score = 90.0 bits (190), Expect = 4e-017
Identities = 46/84 (54%), Positives = 48/84 (57%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 461 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 282
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 281 RSRQLLPHRRSPACLGSARQLPWP 210
Score = 46.9 bits (96), Expect = 4e-004
Identities = 26/66 (39%), Positives = 33/66 (50%)
Frame = -1 / -3
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G C S PP +RAP S + S
Sbjct: 301 AAGS*STGAGSSCRTAEARLAWAARASCRGRGCGCVRPGSCPPPASRAPSSGPSSRSTAP 122
Query: 264 SPSQRN 247
SPS R+
Sbjct: 121 SPSSRS 104
Score = 41.4 bits (84), Expect(2) = 2e-004
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +2 / +3
Query: 251 R*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVD 430
R DGE +L + E+GAL GG + +H + P L +Q AS VR+EL A VD
Sbjct: 108 REDGEGAVLREDGPEEGALDAGGGQDPGRTHPQPRPRQLARAAQASRASAVRQELPAPVD 287
Query: 431 KL 436
+L
Sbjct: 288 QL 293
Score = 24.4 bits (47), Expect(2) = 2e-004
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1 / +2
Query: 544 CQGGLIMRSRIYGTRASR 597
C+GG RSR GT SR
Sbjct: 401 CRGGRTTRSRTCGTPTSR 454
>gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G02 5', mRNA sequence
Length = 604
Score = 205 bits (442), Expect = 7e-052
Identities = 77/117 (65%), Positives = 96/117 (82%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 128 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWIN 307
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 308 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 478
Score = 116 bits (247), Expect = 6e-025
Identities = 54/115 (46%), Positives = 71/115 (61%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 472 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 293
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L+AP KP G RAP A+A+ V + L+LLR P Q L+A R PPHL
Sbjct: 292 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLVLLRRPGAPLQAHLLATRRPPHL 128
Score = 90.0 bits (190), Expect = 4e-017
Identities = 46/84 (54%), Positives = 48/84 (57%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 477 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 298
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 297 RSRQLLPHRRSPACLGSARQLPWP 226
Score = 43.7 bits (89), Expect = 0.004
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = -1 / -3
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G C S PP +R P S + +
Sbjct: 317 AAGS*STGAGSSCRTAEARLAWAARASCRGRGCGCVRPGSCPPPASRGPSSGPSSRNTAP 138
Query: 264 SPSQRN 247
SPS R+
Sbjct: 137 SPSSRS 120
>gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G03 5', mRNA sequence
Length = 501
Score = 205 bits (442), Expect = 7e-052
Identities = 77/117 (65%), Positives = 96/117 (82%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 128 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWIN 307
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 308 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 478
Score = 116 bits (247), Expect = 6e-025
Identities = 54/115 (46%), Positives = 71/115 (61%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 472 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 293
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L+AP KP G RAP A+A+ V + L+LLR P Q L+A R PPHL
Sbjct: 292 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLVLLRRPGAPLQAHLLATRRPPHL 128
Score = 90.0 bits (190), Expect = 4e-017
Identities = 46/84 (54%), Positives = 48/84 (57%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 477 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 298
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 297 RSRQLLPHRRSPACLGSARQLPWP 226
Score = 43.7 bits (89), Expect = 0.004
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = -1 / -2
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G C S PP +R P S + +
Sbjct: 317 AAGS*STGAGSSCRTAEARLAWAARASCRGRGCGCVRPGSCPPPASRGPSSGPSSRNTAP 138
Query: 264 SPSQRN 247
SPS R+
Sbjct: 137 SPSSRS 120
>gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_C21 5', mRNA sequence
Length = 681
Score = 205 bits (442), Expect = 7e-052
Identities = 77/117 (65%), Positives = 96/117 (82%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 116 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWIN 295
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 296 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 466
Score = 116 bits (247), Expect = 6e-025
Identities = 54/115 (46%), Positives = 71/115 (61%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 460 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 281
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L+AP KP G RAP A+A+ V + L+LLR P Q L+A R PPHL
Sbjct: 280 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLVLLRRPGAPLQAHLLATRRPPHL 116
Score = 90.0 bits (190), Expect = 4e-017
Identities = 46/84 (54%), Positives = 48/84 (57%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 465 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 286
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 285 RSRQLLPHRRSPACLGSARQLPWP 214
Score = 43.7 bits (89), Expect = 0.004
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = -1 / -2
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G C S PP +R P S + +
Sbjct: 305 AAGS*STGAGSSCRTAEARLAWAARASCRGRGCGCVRPGSCPPPASRGPSSGPSSRNTAP 126
Query: 264 SPSQRN 247
SPS R+
Sbjct: 125 SPSSRS 108
>gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. vulgare cDNA clone HX13G05
5-PRIME, mRNA sequence
Length = 639
Score = 205 bits (442), Expect = 7e-052
Identities = 77/117 (65%), Positives = 96/117 (82%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 129 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWIN 308
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 309 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 479
Score = 116 bits (247), Expect = 6e-025
Identities = 54/115 (46%), Positives = 71/115 (61%)
Frame = -2 / -2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 473 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 294
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L+AP KP G RAP A+A+ V + L+LLR P Q L+A R PPHL
Sbjct: 293 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLVLLRRPGAPLQAHLLATRRPPHL 129
Score = 90.0 bits (190), Expect = 4e-017
Identities = 46/84 (54%), Positives = 48/84 (57%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 478 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 299
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 298 RSRQLLPHRRSPACLGSARQLPWP 227
Score = 43.7 bits (89), Expect = 0.004
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = -1 / -1
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G C S PP +R P S + +
Sbjct: 318 AAGS*STGAGSSCRTAEARLAWAARASCRGRGCGCVRPGSCPPPASRGPSSGPSSRNTAP 139
Query: 264 SPSQRN 247
SPS R+
Sbjct: 138 SPSSRS 121
>gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC114B11_SK.ab1 similar to myb protein homolog - rice
gi|1946265|emb|CAA72217.1| (Y11414) myb [Oryza sativa],
mRNA sequence
Length = 879
Score = 204 bits (439), Expect = 2e-051
Identities = 77/119 (64%), Positives = 95/119 (79%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR CC K L++G W+ EED L+ HI +HGH W ++P AGL RCGKSCRLRWI
Sbjct: 158 VAMGRSPCCEKMGLKRGPWTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWI 337
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
NYLRPD+KRG F +EED II+LHA+LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L+
Sbjct: 338 NYLRPDIKRGNFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLQ 514
Score = 98.2 bits (208), Expect = 1e-019
Identities = 48/114 (42%), Positives = 67/114 (58%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP + N P V E V+LDD V + GE +L+V Q+V PP+
Sbjct: 505 LLEVCVPDVLDLVVRPPRKPGGNGGPSVAEHGVELDDGVLLLAGEVAALDVGAQVVDPPE 326
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
T L+A + R P A+A+L V H+ +LLR P P + L+AAR PPH
Sbjct: 325 ATALAAAQQAGLIRQRPPVAVAVLLDVSHQGHVLLRCPRPPLEPHLLAARRPPH 164
Score = 72.5 bits (152), Expect = 7e-012
Identities = 41/88 (46%), Positives = 43/88 (48%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSVLPGS AA+ DHL P A S P L SG R* IH
Sbjct: 510 SRFLRCVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMASSSSLVKLPRLMSGRR*LIH 331
Query: 424 LSLQLFPHL*SPASLGTELQQPWPCFVM 341
QL P PA G+ Q WPC M
Sbjct: 330 RRRQLLPQRSRPA*FGSARQLLWPCCSM 247
>emb|X70879.1|HVMYB1G H.vulgare Myb1 gene
Length = 2587
Score = 153 bits (328), Expect(2) = 2e-050
Identities = 56/88 (63%), Positives = 69/88 (78%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EED++L +I HG GCW S+PK AGL RCGKSCRLRWINY
Sbjct: 1002 MGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 1181
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F+ +E++LII+LH++LGN+
Sbjct: 1182 LRPDLKRGNFSHEEDELIIKLHSLLGNK 1265
Score = 73.5 bits (154), Expect(2) = 2e-050
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
RWS IA +LPGRTDNEIKN WN+ I++KL +GIDP TH+ +
Sbjct: 1409 RWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSRGIDPVTHRAI 1534
Score = 71.6 bits (150), Expect(2) = 4e-020
Identities = 34/87 (39%), Positives = 53/87 (60%)
Frame = -2 / -3
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V +++V+LDDE+ ++ E +LEV ++V P + L+A + G APAA+A+ V
Sbjct: 1262 VSQEAVELDDELVLLVAEVAALEVGAEVVDPAEAAALAAAEQAGGLGQGAPAALAVRLDV 1083
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPH 258
E ++LL GP L + L+AAR PPH
Sbjct: 1082 GGESVVLLLGPGALVGVRLLAARRPPH 1002
Score = 57.9 bits (120), Expect(2) = 2e-009
Identities = 28/61 (45%), Positives = 31/61 (50%)
Frame = -3 / -1
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+LFPR SW P LRSG R* I QL P PA+LG E QQP PC +
Sbjct: 1267 YLFPRRLWSLMMSSSSSWLKLPRLRSGRR*LIQRRRQLLPQRSRPAALGRERQQPSPCAL 1088
Query: 343 M 341
M
Sbjct: 1087 M 1085
Score = 53.3 bits (110), Expect(2) = 4e-020
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -3 / -2
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
WV GS+P +SF M F FLISLSVLPGS AI DHL
Sbjct: 1524 WVTGSIPRLVSFLRMCVFQ*FLISLSVLPGSLPAIRDHL 1408
Score = 40.5 bits (82), Expect(2) = 0.006
Identities = 26/66 (39%), Positives = 29/66 (43%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RWGG AA R+ R GP RR +S T + A AAGA P A R G T
Sbjct: 1000 RWGGRRAARRRTPTRAPGPRRRTTDSPPTSRRTARAAGAPCPRPPACSAAARAAASAGST 1179
Query: 436 I*GQTS 453
TS
Sbjct: 1180 TSAPTS 1197
Score = 38.2 bits (77), Expect(2) = 0.036
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DGE +L + ++G L GG TH H A LL L +Q R + +R+EL +D+L
Sbjct: 1001 DGEVAVLREGAHQQGRLDQGGGRPTHRLHQGARRGLLALPAQGRRPAPLRQELPPPLDQL 1180
Score = 36.3 bits (73), Expect = 0.58
Identities = 23/67 (34%), Positives = 31/67 (46%)
Frame = -1 / -2
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACS 277
+*G S S+ +S R+ +R W S+SS A C *V PP +R P +
Sbjct: 1200 A*GRGGGS*SSGGGSSCRSGAGRRPWAGSASSPRRAP*CRR*VGRPPPWSRRPCWCAPSR 1021
Query: 276 SKNASPS 256
S SPS
Sbjct: 1020 STATSPS 1000
Score = 30.4 bits (60), Expect(2) = 2e-009
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQ 543
VG ++ QL D RVP +LDL++ PP Q
Sbjct: 1525 VGHRVDPPARQLPPDVRVPVVLDLVVRPPRQ 1433
Score = 25.8 bits (50), Expect(2) = 0.006
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / +3
Query: 544 CQGGLIMRSRIYGTRASRRS* 606
C+GG RSR GTR S S*
Sbjct: 1434 CRGGRTTRSRTTGTRTSGGS* 1496
Score = 25.4 bits (49), Expect(2) = 0.036
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2 / +1
Query: 518 QVVSNCSAAARED***DQESMELVHQEEAE 607
Q+V + A ED DQE +E H EEA+
Sbjct: 1408 QMVPDSRETAGEDGQRDQELLEHAHPEEAD 1497
>gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_P07 5', mRNA sequence
Length = 523
Score = 199 bits (429), Expect = 5e-050
Identities = 76/119 (63%), Positives = 94/119 (78%)
Frame = +3 / +2
Query: 252 VEMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 431
V MGR C K L++G W+ EED L+ HI +HGH W ++P AGL RCGKSCRLRWI
Sbjct: 128 VAMGRSPCSEKMGLKRGPWTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWI 307
Query: 432 NYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
NYLRPD+KRG F +EED II+LHA+LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L+
Sbjct: 308 NYLRPDIKRGNFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLQ 484
Score = 96.8 bits (205), Expect = 4e-019
Identities = 47/114 (41%), Positives = 66/114 (57%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP + N P V E V+LDD V + GE +L+V Q+V PP+
Sbjct: 475 LLEVCVPDVLDLVVRPPRKPGGNGGPSVAEHGVELDDGVLLLAGEVAALDVGAQVVDPPE 296
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
T L+A + R P A+A+L V H+ +LLR P P + L+ AR PPH
Sbjct: 295 ATALAAAQQAGLIRQRPPVAVAVLLDVSHQGHVLLRRPRPPLEPHLLGARRPPH 134
Score = 72.5 bits (152), Expect = 7e-012
Identities = 41/88 (46%), Positives = 43/88 (48%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSVLPGS AA+ DHL P A S P L SG R* IH
Sbjct: 480 SRFLRCVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMASSSSLVKLPRLMSGRR*LIH 301
Query: 424 LSLQLFPHL*SPASLGTELQQPWPCFVM 341
QL P PA G+ Q WPC M
Sbjct: 300 RRRQLLPQRSRPA*FGSARQLLWPCCSM 217
>gb|CV058923.1|CV058923 BNEL42e10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL42e10 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 717
Score = 199 bits (428), Expect = 6e-050
Identities = 74/116 (63%), Positives = 93/116 (80%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKGLWSPEED+KL ++I +HGHGCWS++P AGLQR GKSC+LRWINYLRP LK G F+
Sbjct: 139 RKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCKLRWINYLRPGLKHGMFSP 318
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+EE+ ++ LHAVLGN+WS+IA LPGRTDNE+KN WNS +KK++ PN+ P
Sbjct: 319 EEEETVMSLHAVLGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGGKGAPNSPTP 486
Score = 100 bits (212), Expect = 4e-020
Identities = 46/101 (45%), Positives = 63/101 (62%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q+ C+ RP V ED V+ + + E L+ PQ+V PPQ
Sbjct: 444 LLEVGVPVVLDLVVGPPRQMPCDPRPLVAEDGVEAHHRLLLLRREHAVLQPRPQVVDPPQ 265
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
L+ PL+P G RAPAA+A+ VI E L+LLR P+PL
Sbjct: 264 LAALAVPLEPGFSGKRAPAAVAVPENVIAELLVLLRRPQPL 142
Score = 99.6 bits (211), Expect = 5e-020
Identities = 50/100 (50%), Positives = 56/100 (56%)
Frame = -3 / -2
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSW 470
+ +G+ LG+ + FL EF FL SLSVLPG C AI DHL PRTA S
Sbjct: 494 AAAGVGELGAPLPPSTLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRTAWRLITVSSSSG 315
Query: 469 ANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
N P G R* IH SLQL P SPA G+ LQQPWPC
Sbjct: 314 ENMPCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQPWPC 195
Score = 40.5 bits (82), Expect = 0.033
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = -1 / -3
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
A+ S ST+A +S R+ A+ E SSS G A C+ S PP T AP +SA +S+
Sbjct: 289 AAGS*STAACSSCRSAGARL*REARSSSRGRAGECNRGASGPPPATTAPSGSSAWASR 116
Score = 40.5 bits (82), Expect(2) = 1e-004
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2 / +3
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
QAE +GA+V GG E H+ A P LLE S+ A R+EL A VD+L
Sbjct: 126 QAELPEGAVVAGGGPEAPRLHSPARPRLLERASR*SRAPAERQELQAAVDQL 281
Score = 26.3 bits (51), Expect(2) = 1e-004
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1 / +2
Query: 544 CQGGLIMRSRIYGTRASRR 600
C+GG RSR GT SRR
Sbjct: 389 CRGGPTTRSRTTGTPTSRR 445
>gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. vulgare cDNA clone HS07L12
5-PRIME, mRNA sequence
Length = 514
Score = 198 bits (427), Expect = 9e-050
Identities = 74/116 (63%), Positives = 92/116 (79%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKGLWSPEED+KL ++I +HGHGCWS++P AGLQR GKSCRLRWINYLRP LK G F+
Sbjct: 166 RKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSA 345
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+EE+ ++ LHA LGN+WS+IA LPGRTDNE+KN WNS +KK++ PN+ P
Sbjct: 346 EEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGGKGAPNSPAP 513
Score = 101 bits (215), Expect = 1e-020
Identities = 46/101 (45%), Positives = 63/101 (62%)
Frame = -2 / -2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q+ C+ RP V E V+ + + E L+ PQ+V PPQ
Sbjct: 471 LLEVGVPVVLDLVVGPPRQMPCDPRPLVAEGGVEAHHRLLLLRREHAVLQPRPQVVDPPQ 292
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
P L+ PL+P G RAPAA+A+ VI E L+LLR P+PL
Sbjct: 291 PAALAVPLEPGFSGKRAPAAVAVPENVIAELLVLLRRPQPL 169
Score = 95.9 bits (203), Expect = 7e-019
Identities = 46/85 (54%), Positives = 48/85 (56%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+ FL EF FL SLSVLPG C AI DHL PR A S N P G R* IH
Sbjct: 476 TLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSSSAENMPCFSPGRR*LIH 297
Query: 424 LSLQLFPHL*SPASLGTELQQPWPC 350
SLQL P SPA G+ LQQPWPC
Sbjct: 296 RSLQLLPFRWSPALAGSALQQPWPC 222
Score = 40.5 bits (82), Expect = 0.033
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = -1 / -1
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
A+ S ST+A +S R+ A+ E SSS G A C+ S PP T AP +SA +S+
Sbjct: 316 AAGS*STAACSSCRSAGARL*REARSSSRGRAGECNRGASGPPPATTAPSGSSAWASR 143
Score = 40.5 bits (82), Expect(2) = 1e-004
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2 / +3
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
QAE +GA+V GG E H+ A P LLE S+ A R+EL A VD+L
Sbjct: 153 QAELPEGAVVAGGGPEAPRLHSPARPRLLERASR*SRAPAERQELQAAVDQL 308
Score = 26.3 bits (51), Expect(2) = 1e-004
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVV + +A A ED QE +EL+ QEE + +Q +A
Sbjct: 387 QQVVEDRTAFAGEDRQRGQELLELLPQEEGRGRQGSAQLARA 512
>gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. vulgare cDNA clone HL02F10
3-PRIME, mRNA sequence
Length = 610
Score = 198 bits (427), Expect = 9e-050
Identities = 74/116 (63%), Positives = 92/116 (79%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKGLWSPEED+KL ++I +HGHGCWS++P AGLQR GKSCRLRWINYLRP LK G F+
Sbjct: 151 RKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSA 330
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+EE+ ++ LHA LGN+WS+IA LPGRTDNE+KN WNS +KK++ PN+ P
Sbjct: 331 EEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGGKGAPNSPAP 498
Score = 101 bits (215), Expect = 1e-020
Identities = 46/101 (45%), Positives = 63/101 (62%)
Frame = -2 / -2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q+ C+ RP V E V+ + + E L+ PQ+V PPQ
Sbjct: 456 LLEVGVPVVLDLVVGPPRQMPCDPRPLVAEGGVEAHHRLLLLRREHAVLQPRPQVVDPPQ 277
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
P L+ PL+P G RAPAA+A+ VI E L+LLR P+PL
Sbjct: 276 PAALAVPLEPGFSGKRAPAAVAVPENVIAELLVLLRRPQPL 154
Score = 95.9 bits (203), Expect = 7e-019
Identities = 46/85 (54%), Positives = 48/85 (56%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+ FL EF FL SLSVLPG C AI DHL PR A S N P G R* IH
Sbjct: 461 TLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSSSAENMPCFSPGRR*LIH 282
Query: 424 LSLQLFPHL*SPASLGTELQQPWPC 350
SLQL P SPA G+ LQQPWPC
Sbjct: 281 RSLQLLPFRWSPALAGSALQQPWPC 207
Score = 40.5 bits (82), Expect = 0.033
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = -1 / -1
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
A+ S ST+A +S R+ A+ E SSS G A C+ S PP T AP +SA +S+
Sbjct: 301 AAGS*STAACSSCRSAGARL*REARSSSRGRAGECNRGASGPPPATTAPSGSSAWASR 128
Score = 40.5 bits (82), Expect(2) = 1e-004
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2 / +3
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
QAE +GA+V GG E H+ A P LLE S+ A R+EL A VD+L
Sbjct: 138 QAELPEGAVVAGGGPEAPRLHSPARPRLLERASR*SRAPAERQELQAAVDQL 293
Score = 26.3 bits (51), Expect(2) = 1e-004
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2 / +3
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVV + +A A ED QE +EL+ QEE + +Q +A
Sbjct: 372 QQVVEDRTAFAGEDRQRGQELLELLPQEEGRGRQGSAQLARA 497
>gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_H14 5', mRNA sequence
Length = 455
Score = 197 bits (424), Expect = 2e-049
Identities = 74/109 (67%), Positives = 88/109 (80%)
Frame = +3 / +2
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G W+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWIN
Sbjct: 128 KMGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWIN 307
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
YLRPD+KRG F+ +EE II+LH +LGNRWS IAA LPGRTDNEIKN+W
Sbjct: 308 YLRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAAMLPGRTDNEIKNVW 454
Score = 110 bits (235), Expect = 3e-023
Identities = 51/109 (46%), Positives = 67/109 (61%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+P L+A
Sbjct: 454 PHVLDLVVRPPRQHGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPEPAALAA 275
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P KP G RAP A+A+ V + L+LLR P Q L+A R PPHL
Sbjct: 274 PQKPGLLGQRAPVAVAVAVDVCDQDLVLLRRPGAPLQAHLLATRRPPHL 128
Score = 88.1 bits (186), Expect = 1e-016
Identities = 43/76 (56%), Positives = 45/76 (59%)
Frame = -3 / -3
Query: 580 HRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPH 401
H FLISLSVLPGS AAI DHL P + C S P L SG R* IH S QL PH
Sbjct: 453 HTFLISLSVLPGSMAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIHRSRQLLPH 274
Query: 400 L*SPASLGTELQQPWP 353
SPA LG+ Q PWP
Sbjct: 273 RRSPACLGSARQLPWP 226
Score = 43.7 bits (89), Expect = 0.004
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = -1 / -1
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST A +S RT EA+ W +S G C S PP +R P S + +
Sbjct: 317 AAGS*STGAGSSCRTAEARLAWAARASCRGRGCGCVRPGSCPPPASRGPSSGPSSRNTAP 138
Query: 264 SPSQRN 247
SPS R+
Sbjct: 137 SPSSRS 120
>gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M184 5-PRIME, mRNA sequence
Length = 506
Score = 196 bits (422), Expect = 4e-049
Identities = 75/139 (53%), Positives = 95/139 (68%)
Frame = +3 / +1
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K+ L +G W+ ED+ L+++I +HG G W S+PK AGL RCGKSCRLRW+N
Sbjct: 22 DMGRKPCCSKEGLNRGAWTAMEDDILVSYINEHGEGKWGSLPKRAGLNRCGKSCRLRWLN 201
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
YLRP +KRG + DEE+LI+ LH +LGNRWS IA +LPGRTDNEIKN WN+ + K+ Q
Sbjct: 202 YLRPGIKRGNISDDEEELIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTTLSKRNHQS 381
Query: 615 GIDPNTHKPLTEADHGGAA 671
P A AA
Sbjct: 382 APPPRXRLXEPPAGQAAAA 438
Score = 103 bits (219), Expect = 4e-021
Identities = 50/115 (43%), Positives = 68/115 (59%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
L VP +LDLI+ P Q + RPPV V+ DDE+ V+G+ SL+ P++V PPQ
Sbjct: 366 LAQGGVPVVLDLIVCSPRQPPRDQRPPVA*QPVEPDDELLLVVGDVASLDPRPEVVEPPQ 187
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
P L AP++PS F AP A+AML V + ++L P Q LL AA +PPH+
Sbjct: 186 PAALPAPIQPSSFREAAPLALAMLVDVGDQDVVLHCRPRSSVQALLGAAWLPPHV 22
Score = 73.9 bits (155), Expect = 3e-012
Identities = 41/81 (50%), Positives = 42/81 (51%)
Frame = -3 / -1
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F FLISLSV PGS AI DHL P S PLL G R* H S QLFP
Sbjct: 350 FQ*FLISLSVRPGSRPAISDHLLPSNLWSLTMSSSSSSEMLPLLIPGRR*LSHRSRQLFP 171
Query: 403 HL*SPASLGTELQQPWPCFVM 341
HL SPA LG P PC +M
Sbjct: 170 HLFSPARLGRLPHLPSPCSLM 108
Score = 49.2 bits (101), Expect = 8e-005
Identities = 32/71 (45%), Positives = 36/71 (50%)
Frame = +1 / +2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI 438
WGG AA R+* G R + T SMA A+GA N LG GA R G GG T
Sbjct: 26 WGGSHAAPRRA*TEERGRQWRTTSWSPTSTSMARASGAASLNELG*IGAGRAAGCGGSTT 205
Query: 439 *GQTSREGHSP 471
G+ SRE SP
Sbjct: 206 SGRGSREATSP 238
>gb|CV056415.1|CV056415 BNEL17E10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL17E10 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 479
Score = 195 bits (421), Expect = 6e-049
Identities = 73/108 (67%), Positives = 89/108 (82%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K + RKGLWSPEED+KL + I +HGH CWS+VP AGLQR GKSCRLRWINYLRP LK G
Sbjct: 82 KAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWINYLRPGLKHG 261
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
F+++EE+ ++ LHA LGN+WSQIA LPGRTDNE+KN WNS +KK++
Sbjct: 262 MFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRV 405
Score = 99.6 bits (211), Expect = 5e-020
Identities = 49/106 (46%), Positives = 66/106 (62%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ RVP +L L++ P Q+ LRP V E V+ D +FF+ GE L+ PQ+V P Q
Sbjct: 399 LLEVRVPVVLHLVVRPARQVLRYLRPLVAEGGVEAHDGLFFLPGEHAVLQPRPQVVDPSQ 220
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLL 282
P L+ PLKP G+ APAA+A+ I E L+LLR P+PL+ L L
Sbjct: 219 PAALAVPLKPGLDGDGAPAAVAVADDEIAELLVLLRRPQPLAVLRL 82
Score = 93.2 bits (197), Expect = 5e-018
Identities = 46/82 (56%), Positives = 47/82 (57%)
Frame = -3 / -1
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL +EF F SLSV PG C AI*DHL PR A S N P GLR* IH S
Sbjct: 398 FLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRS 219
Query: 418 LQLFPHL*SPASLGTELQQPWP 353
LQL P *SPA GT LQQ WP
Sbjct: 218 LQLLPFR*SPALTGTVLQQLWP 153
>gb|CV056818.1|CV056818 BNEL20h7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL20h7 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 514
Score = 195 bits (421), Expect = 6e-049
Identities = 73/108 (67%), Positives = 89/108 (82%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K + RKGLWSPEED+KL + I +HGH CWS+VP AGLQR GKSCRLRWINYLRP LK G
Sbjct: 162 KAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWINYLRPGLKHG 341
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
F+++EE+ ++ LHA LGN+WSQIA LPGRTDNE+KN WNS +KK++
Sbjct: 342 MFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRV 485
Score = 99.6 bits (211), Expect = 5e-020
Identities = 49/106 (46%), Positives = 66/106 (62%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ RVP +L L++ P Q+ LRP V E V+ D +FF+ GE L+ PQ+V P Q
Sbjct: 479 LLEVRVPVVLHLVVRPARQVLRYLRPLVAEGGVEAHDGLFFLPGEHAVLQPRPQVVDPSQ 300
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLL 282
P L+ PLKP G+ APAA+A+ I E L+LLR P+PL+ L L
Sbjct: 299 PAALAVPLKPGLDGDGAPAAVAVADDEIAELLVLLRRPQPLAVLRL 162
Score = 93.2 bits (197), Expect = 5e-018
Identities = 46/82 (56%), Positives = 47/82 (57%)
Frame = -3 / -1
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL +EF F SLSV PG C AI*DHL PR A S N P GLR* IH S
Sbjct: 478 FLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRS 299
Query: 418 LQLFPHL*SPASLGTELQQPWP 353
LQL P *SPA GT LQQ WP
Sbjct: 298 LQLLPFR*SPALTGTVLQQLWP 233
>gb|CV058774.1|CV058774 BNEL40g12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40g12 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 488
Score = 195 bits (421), Expect = 6e-049
Identities = 73/108 (67%), Positives = 89/108 (82%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K + RKGLWSPEED+KL + I +HGH CWS+VP AGLQR GKSCRLRWINYLRP LK G
Sbjct: 162 KAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWINYLRPGLKHG 341
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
F+++EE+ ++ LHA LGN+WSQIA LPGRTDNE+KN WNS +KK++
Sbjct: 342 MFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRV 485
Score = 99.6 bits (211), Expect = 5e-020
Identities = 49/106 (46%), Positives = 66/106 (62%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ RVP +L L++ P Q+ LRP V E V+ D +FF+ GE L+ PQ+V P Q
Sbjct: 479 LLEVRVPVVLHLVVRPARQVLRYLRPLVAEGGVEAHDGLFFLPGEHAVLQPRPQVVDPSQ 300
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLL 282
P L+ PLKP G+ APAA+A+ I E L+LLR P+PL+ L L
Sbjct: 299 PAALAVPLKPGLDGDGAPAAVAVADDEIAELLVLLRRPQPLAVLRL 162
Score = 93.2 bits (197), Expect = 5e-018
Identities = 46/82 (56%), Positives = 47/82 (57%)
Frame = -3 / -2
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL +EF F SLSV PG C AI*DHL PR A S N P GLR* IH S
Sbjct: 478 FLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRS 299
Query: 418 LQLFPHL*SPASLGTELQQPWP 353
LQL P *SPA GT LQQ WP
Sbjct: 298 LQLLPFR*SPALTGTVLQQLWP 233
>gb|CV058910.1|CV058910 BNEL42d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL42d1 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 478
Score = 195 bits (421), Expect = 6e-049
Identities = 73/108 (67%), Positives = 89/108 (82%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K + RKGLWSPEED+KL + I +HGH CWS+VP AGLQR GKSCRLRWINYLRP LK G
Sbjct: 82 KAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWINYLRPGLKHG 261
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
F+++EE+ ++ LHA LGN+WSQIA LPGRTDNE+KN WNS +KK++
Sbjct: 262 MFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRV 405
Score = 99.6 bits (211), Expect = 5e-020
Identities = 49/106 (46%), Positives = 66/106 (62%)
Frame = -2 / -2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ RVP +L L++ P Q+ LRP V E V+ D +FF+ GE L+ PQ+V P Q
Sbjct: 399 LLEVRVPVVLHLVVRPARQVLRYLRPLVAEGGVEAHDGLFFLPGEHAVLQPRPQVVDPSQ 220
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLL 282
P L+ PLKP G+ APAA+A+ I E L+LLR P+PL+ L L
Sbjct: 219 PAALAVPLKPGLDGDGAPAAVAVADDEIAELLVLLRRPQPLAVLRL 82
Score = 93.2 bits (197), Expect = 5e-018
Identities = 46/82 (56%), Positives = 47/82 (57%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL +EF F SLSV PG C AI*DHL PR A S N P GLR* IH S
Sbjct: 398 FLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRS 219
Query: 418 LQLFPHL*SPASLGTELQQPWP 353
LQL P *SPA GT LQQ WP
Sbjct: 218 LQLLPFR*SPALTGTVLQQLWP 153
>gb|CV062377.1|CV062377 BNEL79d11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL79d11 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 558
Score = 195 bits (421), Expect = 6e-049
Identities = 73/108 (67%), Positives = 89/108 (82%)
Frame = +3 / +3
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K + RKGLWSPEED+KL + I +HGH CWS+VP AGLQR GKSCRLRWINYLRP LK G
Sbjct: 162 KAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWINYLRPGLKHG 341
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
F+++EE+ ++ LHA LGN+WSQIA LPGRTDNE+KN WNS +KK++
Sbjct: 342 MFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRV 485
Score = 99.6 bits (211), Expect = 5e-020
Identities = 49/106 (46%), Positives = 66/106 (62%)
Frame = -2 / -2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ RVP +L L++ P Q+ LRP V E V+ D +FF+ GE L+ PQ+V P Q
Sbjct: 479 LLEVRVPVVLHLVVRPARQVLRYLRPLVAEGGVEAHDGLFFLPGEHAVLQPRPQVVDPSQ 300
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLL 282
P L+ PLKP G+ APAA+A+ I E L+LLR P+PL+ L L
Sbjct: 299 PAALAVPLKPGLDGDGAPAAVAVADDEIAELLVLLRRPQPLAVLRL 162
Score = 93.2 bits (197), Expect = 5e-018
Identities = 46/82 (56%), Positives = 47/82 (57%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL +EF F SLSV PG C AI*DHL PR A S N P GLR* IH S
Sbjct: 478 FLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRS 299
Query: 418 LQLFPHL*SPASLGTELQQPWP 353
LQL P *SPA GT LQQ WP
Sbjct: 298 LQLLPFR*SPALTGTVLQQLWP 233
>gb|CV063729.1|CV063729 BNEL92e6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL92e6 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 478
Score = 195 bits (421), Expect = 6e-049
Identities = 73/108 (67%), Positives = 89/108 (82%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K + RKGLWSPEED+KL + I +HGH CWS+VP AGLQR GKSCRLRWINYLRP LK G
Sbjct: 82 KAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWINYLRPGLKHG 261
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
F+++EE+ ++ LHA LGN+WSQIA LPGRTDNE+KN WNS +KK++
Sbjct: 262 MFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKKRV 405
Score = 99.6 bits (211), Expect = 5e-020
Identities = 49/106 (46%), Positives = 66/106 (62%)
Frame = -2 / -2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ RVP +L L++ P Q+ LRP V E V+ D +FF+ GE L+ PQ+V P Q
Sbjct: 399 LLEVRVPVVLHLVVRPARQVLRYLRPLVAEGGVEAHDGLFFLPGEHAVLQPRPQVVDPSQ 220
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLL 282
P L+ PLKP G+ APAA+A+ I E L+LLR P+PL+ L L
Sbjct: 219 PAALAVPLKPGLDGDGAPAAVAVADDEIAELLVLLRRPQPLAVLRL 82
Score = 93.2 bits (197), Expect = 5e-018
Identities = 46/82 (56%), Positives = 47/82 (57%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
FL +EF F SLSV PG C AI*DHL PR A S N P GLR* IH S
Sbjct: 398 FLRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRS 219
Query: 418 LQLFPHL*SPASLGTELQQPWP 353
LQL P *SPA GT LQQ WP
Sbjct: 218 LQLLPFR*SPALTGTVLQQLWP 153
>gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022A15f, mRNA sequence
Length = 838
Score = 116 bits (249), Expect(2) = 1e-048
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EEDE+L+ H+ HG GCW S+P GL RCGKSCRL WINY
Sbjct: 180 MGRSPCCEKAHTNKGAWTTEEDERLVAHVRAHGEGCWRSLPSADGLLRCGKSCRLTWINY 359
Query: 438 LRPDLK 455
LRPDLK
Sbjct: 360 LRPDLK 377
Score = 97.7 bits (207), Expect(2) = 1e-048
Identities = 38/70 (54%), Positives = 54/70 (77%)
Frame = +3 / +1
Query: 444 PDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
P +R +DE++LI++LH++L N+WS IAA+LPGRTDNEIKN WN+ I KKL ++G
Sbjct: 367 PTSRRVNLRRDEDELIVKLHSLLRNKWSLIAARLPGRTDNEIKNYWNTHIPKKLLRRGTH 546
Query: 624 PNTHKPLTEA 653
TH+P+T+A
Sbjct: 547 HVTHRPVTDA 576
Score = 57.9 bits (120), Expect(2) = 8e-019
Identities = 31/91 (34%), Positives = 50/91 (54%)
Frame = -2 / -3
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVA 276
LEV ++V P + L+A + G RAPA + + V H+ L+LLR P L ++ L+A
Sbjct: 377 LEVGAEVVDPREAAALAAAQQTVGAGQRAPAPLTVRPDVGHQPLVLLRRPRALVRVRLLA 198
Query: 275 ARMPPHLNAMQNLGAPTKLTELTGLRNV*LC 183
AR PPH ++++ +L+ L G +C
Sbjct: 197 ARRPPHGRSLRS*WLCVRLSALLGSLTCGVC 105
Score = 57.0 bits (118), Expect(2) = 8e-019
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -2 / -2
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGE 465
QLL D RVP +LDL++ PP Q R + RP V E++V+LDDE+ V +
Sbjct: 528 QLLRDVRVPVVLDLVVRPPRQARGDERPLVAEEAVELDDELVLVASQ 388
Score = 48.3 bits (99), Expect(2) = 3e-012
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -3 / -3
Query: 655 SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPR 509
+ASV+G V +P SFF M F FLISLSVLPG AA+ DHL R
Sbjct: 578 AASVTGRCVTW*VPLRSSFFGMCVFQ*FLISLSVLPGRRAAMSDHLLRR 432
Score = 44.1 bits (90), Expect(2) = 3e-012
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -3 / -1
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
LRSG R* IH+ QL P P++LG+E Q P PC
Sbjct: 376 LRSGRR*LIHVRRQLLPQRSRPSALGSERQHPSPC 272
Score = 34.5 bits (69), Expect = 2.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 538 RSCQGGLIMRSRIYGTRASRRS 603
R+C+GG RSR GTR SRRS
Sbjct: 461 RACRGGRTTRSRTTGTRTSRRS 526
>gb|CV062831.1|CV062831 BNEL83e5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL83e5 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 588
Score = 193 bits (415), Expect = 4e-048
Identities = 72/108 (66%), Positives = 88/108 (81%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K + RKGLWSPEED+KL + I +HGH CWS+VP AGLQR GKSCRLRWINYLRP LK G
Sbjct: 188 KAQHRKGLWSPEEDQKLRDFIVRHGHSCWSTVPVKAGLQRNGKSCRLRWINYLRPGLKHG 367
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
F+++EE+ ++ LHA LGN+WSQIA LPGRTDNE+KN WNS +K ++
Sbjct: 368 MFSREEEETVMGLHAALGNKWSQIAQHLPGRTDNEVKNYWNSYLKMRV 511
Score = 97.7 bits (207), Expect = 2e-019
Identities = 48/105 (45%), Positives = 65/105 (61%)
Frame = -2 / -3
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L+ RVP +L L++ P Q+ LRP V E V+ D +FF+ GE L+ PQ+V P QP
Sbjct: 502 LEVRVPVVLHLVVRPARQVLRYLRPLVAEGGVEAHDGLFFLPGEHAVLQPRPQVVDPSQP 323
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLL 282
L+ PLKP G+ APAA+A+ I E L+LLR P+PL+ L L
Sbjct: 322 AALAVPLKPGLDGDGAPAAVAVADDEIAELLVLLRRPQPLAVLRL 188
Score = 90.4 bits (191), Expect = 3e-017
Identities = 45/81 (55%), Positives = 46/81 (56%)
Frame = -3 / -1
Query: 595 LMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSL 416
L +EF F SLSV PG C AI*DHL PR A S N P GLR* IH SL
Sbjct: 501 LRYEFQ*FFTSLSVRPGRCCAI*DHLLPRAAWRPMTVSSSSRENMPCFSPGLR*LIHRSL 322
Query: 415 QLFPHL*SPASLGTELQQPWP 353
QL P *SPA GT LQQ WP
Sbjct: 321 QLLPFR*SPALTGTVLQQLWP 259
>gb|BJ467643.1|BJ467643 BJ467643 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29d04 3', mRNA sequence
Length = 714
Score = 110 bits (234), Expect(6) = 7e-044
Identities = 47/64 (73%), Positives = 50/64 (78%)
Frame = +3 / -1
Query: 1359 MQNQSQTLYDDVIKAESQFNIEGICASWFXXXXXXXXXXVAPDMYDKDLQRMQLSFENI* 1538
MQNQSQ+LYDDVIKAESQFN+EGICASWF A DMYDKDLQRM LSFE+I*
Sbjct: 711 MQNQSQSLYDDVIKAESQFNMEGICASWFQNQQPQQQLQAASDMYDKDLQRMPLSFEHI* 532
Query: 1539 ALCS 1550
LCS
Sbjct: 531 VLCS 520
Score = 109 bits (232), Expect(5) = 6e-040
Identities = 46/66 (69%), Positives = 54/66 (81%)
Frame = +1 / -2
Query: 1360 CRTRAKRFMMM*SRQRANST*KGYVLLGSRISSHSNSCR*HQTCMTRTCKECNYLLRISR 1539
CRTRA + MM*S+QRA+ST +GYVLLGSRISS SNSC+ HQTCM +T KEC LL ISR
Sbjct: 710 CRTRASHYTMM*SKQRASSTWRGYVLLGSRISSRSNSCKQHQTCMIKTYKECPCLLSISR 531
Query: 1540 HYVPPH 1557
+YV P+
Sbjct: 530 YYVLPY 513
Score = 106 bits (226), Expect(5) = 8e-048
Identities = 47/66 (71%), Positives = 50/66 (75%)
Frame = -3 / +2
Query: 1555 VVEHNA*IFSKDSCILCKSLSYMSGATXXXXXXX*FWNQEAHIPSMLNWLSALITSS*SV 1376
+ EH+ *I SKD ILCKSLSYMS A *FWNQEAHIPSMLNWLSALITSS S
Sbjct: 515 MAEHST*ICSKDKGILCKSLSYMSDAACSCCCGC*FWNQEAHIPSMLNWLSALITSSYSD 694
Query: 1375 WLWFCM 1358
WLWFC+
Sbjct: 695 WLWFCI 712
Score = 93.2 bits (197), Expect(2) = 2e-020
Identities = 40/65 (61%), Positives = 43/65 (66%)
Frame = +2 / -3
Query: 1361 AEPEPNAL**CDQGREPIQHRRDMCFLVPESXXXXXXXGSTRHV*QGLAKNATIF*EYLG 1540
AEPEP + *CDQ REP+QH DMCFLVPES S RHV* L KNA +F* YLG
Sbjct: 709 AEPEPVTIR*CDQSREPVQHGGDMCFLVPESAAAATAASSIRHV**RLTKNALVF*AYLG 530
Query: 1541 IMFHH 1555
MF H
Sbjct: 529 TMFCH 515
Score = 90.9 bits (192), Expect(7) = 2e-036
Identities = 42/69 (60%), Positives = 46/69 (66%)
Frame = -1 / +3
Query: 1566 LCSMWWNIMPRYSQKIVAFFASPCHTCLVLPXXXXXXADSGTKKHISLLC*IGSLP*SHH 1387
L +W NI+PRY+QK AFF S HTCL+L ADSGTKKHIS C* GSL *SHH
Sbjct: 504 LLHVWQNIVPRYAQKTRAFFVSLYHTCLMLLAAVAAAADSGTKKHISPPC*TGSLL*SHH 683
Query: 1386 HKAFGSGSA 1360
GSGSA
Sbjct: 684 RIVTGSGSA 710
Score = 80.8 bits (170), Expect(4) = 4e-021
Identities = 40/65 (61%), Positives = 44/65 (67%)
Frame = -2 / +1
Query: 1553 GGT*CLDILKR*LHSLQVLVIHVWCYXXXXXXXXXLEPRSTYPFYVELALCLDHIIIKRL 1374
G T* LD+LKR HSL V +IHV C LEPRSTYP +VELALC DHII+ L
Sbjct: 517 GRT*YLDMLKRQGHSL*VFIIHV*CCLQLLLRLLILEPRSTYPLHVELALCFDHIIV**L 696
Query: 1373 ALVLH 1359
ALVLH
Sbjct: 697 ALVLH 711
Score = 68.0 bits (142), Expect(5) = 8e-048
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = -2 / +3
Query: 1901 LPTHAFLPMAIYIYLISTRENKNSNMQKFSRVQKENINFQEKGKETLEHTFLCILLQLLM 1722
LPTHA P+ +Y++ +S + RVQK+ + K +ET E TFLC L+ LLM
Sbjct: 168 LPTHAVFPIPVYLFDKQRVNKNSSIQKLSCRVQKKTTILKRKERETPECTFLCNLMPLLM 347
Query: 1721 PGLSFP*YCQLFN*G 1677
LSFP +C +F+ G
Sbjct: 348 TELSFPWHCMIFSRG 392
Score = 50.6 bits (104), Expect(6) = 7e-044
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +2 / -1
Query: 1676 FLS*RAGNIKERTALALEVAAGCIGKYVLESPFLSLEN*CFPSVHD 1813
FL *R+ + E+ L+ VA+ C KY+LESPFLS F SVHD
Sbjct: 393 FLG*RSCSATEKITLSSGVASNCTEKYILESPFLSSSKLLFSSVHD 256
Score = 49.6 bits (102), Expect(5) = 6e-040
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +1 / -3
Query: 1675 VPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFPFS*KLMFSFCTR 1812
+P+LK Q GKD+ IRS ++HRKV S VS F K++ FCTR
Sbjct: 394 LPRLKIMQCHGKDNSVIRSGIKLHRKVHSGVSLSFLFKIVVFFCTR 257
Score = 45.5 bits (93), Expect(7) = 2e-036
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / +2
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLIL 1696
SCTE + F ERKGDSR YF + AT + R + S+ L
Sbjct: 257 SCTEENNNFEEERKGDSRMYFSVQFDATPDDRVIFSVAL 373
Score = 38.6 bits (78), Expect(5) = 8e-048
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -2 / +1
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K KNT+CN *F TCMAAVE G
Sbjct: 70 KRYKNTSCNI*FESTCMAAVEKFG 141
Score = 33.1 bits (66), Expect(6) = 7e-044
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / -2
Query: 1918 SPKLSTAAMHVHAN*LLHVVF 1980
+P STAAMHV +N*+L +VF
Sbjct: 143 APNFSTAAMHVDSN*ILQLVF 81
Score = 30.9 bits (61), Expect(2) = 2e-020
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -3
Query: 1928 FQLLPCMSMQINYCMLYF 1981
FQ LPC ++I YC LYF
Sbjct: 133 FQQLPCT*IRIKYCNLYF 80
Score = 30.9 bits (61), Expect(5) = 6e-040
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / -1
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ FN CHA +L IA CIF F
Sbjct: 141 PKLFNSCHARRFELNIATCIFISF 70
Score = 30.9 bits (61), Expect(4) = 4e-021
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = -3 / +1
Query: 1816 SVVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEE 1676
+VVYRRK + K+ RL N+L A C+ * Q F A S EE
Sbjct: 253 AVVYRRKQQF*RGKKGRLQNVLFCAI*CHS**QSYLFRGTA*SLAEE 393
Score = 27.2 bits (53), Expect(7) = 2e-036
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3 / +2
Query: 1981 KIQHAIINLHGHAWQQLKVWGYLHV 1907
KIQ AI N + AWQ LK G L V
Sbjct: 80 KIQVAIFNSNLRAWQLLKSLGLLLV 154
Score = 26.7 bits (52), Expect(5) = 8e-048
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1 / +1
Query: 1590 RVSASSDLLCSMW 1552
+VSAS+DLLCSM+
Sbjct: 478 QVSASADLLCSMY 516
Score = 26.3 bits (51), Expect(5) = 8e-048
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 1670 VEDDFCINLTYLCEQ 1626
VE D+CINL YL Q
Sbjct: 398 VEVDYCINLAYLSMQ 442
Score = 26.3 bits (51), Expect(6) = 7e-044
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3 / -3
Query: 1554 TWNRADQKKQKLV 1592
TW+RADQ+K +LV
Sbjct: 514 TWSRADQQKLRLV 476
Score = 25.8 bits (50), Expect(7) = 2e-036
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 1906 ESYRHMHFCLWLSIFI 1859
+SYRHM F +LSI++
Sbjct: 163 DSYRHMQFFPFLSIYL 210
Score = 25.4 bits (49), Expect(6) = 7e-044
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 1817 TFAYLSFCSL 1846
TF YLSFCSL
Sbjct: 249 TFGYLSFCSL 220
Score = 25.4 bits (49), Expect(7) = 2e-036
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3 / +3
Query: 1675 QLWRMISVST*RIYV 1631
+LWR+I+VST IY+
Sbjct: 393 RLWRLITVSTSHIYL 437
Score = 24.9 bits (48), Expect(5) = 6e-040
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 1553 HMEQSRSEEAET 1588
+MEQSRS EAET
Sbjct: 515 YMEQSRSAEAET 480
Score = 24.4 bits (47), Expect(5) = 6e-040
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1 / -3
Query: 1789 LMFSFCTRLNFCIFEFLFSL 1848
++F +LNF I EFLF+L
Sbjct: 277 VVFFCTRQLNFWILEFLFTL 218
Score = 24.0 bits (46), Expect(6) = 7e-044
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / -2
Query: 1866 IDSHRQKCMCR*LS 1907
ID + + CMCR*LS
Sbjct: 203 IDRNGKNCMCR*LS 162
Score = 23.5 bits (45), Expect(7) = 2e-036
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / +2
Query: 1580 LLLICSVPC 1554
LLLICS PC
Sbjct: 488 LLLICSAPC 514
Score = 22.6 bits (43), Expect(4) = 4e-021
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / +1
Query: 1671 CGG*FLYQLNVSM 1633
CGG* LYQ +S+
Sbjct: 397 CGG*LLYQPRISI 435
Score = 22.6 bits (43), Expect(4) = 4e-021
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 1902 ATDTCIFAYGYLYL 1861
ATDTC F++ L++
Sbjct: 167 ATDTCSFSHSCLFI 208
Score = 22.1 bits (42), Expect(7) = 2e-036
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 1848 QREQKLKYAKVQ 1813
+ EQKLKY KV+
Sbjct: 218 ESEQKLKYPKVE 253
>gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01B16
3-PRIME, mRNA sequence
Length = 535
Score = 191 bits (411), Expect = 1e-047
Identities = 73/133 (54%), Positives = 95/133 (71%)
Frame = +3 / +1
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
C +Q L+KG W+PEED+ L++++ + G W +PKLAGL RCGKSCRLRW NYLRPD+
Sbjct: 118 CESRQGLKKGPWTPEEDKLLVDYVQANAPGNWRMLPKLAGLNRCGKSCRLRWTNYLRPDI 297
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNT 632
KRG F +E I++LHA++GN+WS IAAQLPGRTDNEIKN WN+ +KK+LRQ +
Sbjct: 298 KRGPFTPEEHKSILQLHAIVGNKWSMIAAQLPGRTDNEIKNYWNTNLKKQLRQAALVGEQ 477
Query: 633 HKPLTEADHGGAA 671
H + A A
Sbjct: 478 HPAVASAGASAGA 516
Score = 109 bits (233), Expect = 5e-023
Identities = 51/117 (43%), Positives = 71/117 (60%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L +LLL+ VP +LDL++ P QLR + P V +D V+L+D + GE P+L+V P++V
Sbjct: 456 LAELLLEVGVPVVLDLVVRPAGQLRRDHGPLVADDGVELEDGLVLFGGEGPALDVRPEVV 277
Query: 431 YPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPP 261
PPQP L+AP++P E G AP A + V+ E L+LLR P P Q L A P
Sbjct: 276 RPPQPAALAAPVQPGELGEHAPVAGGVGLDVVDEELVLLRRPRPFLQPLPALAAGSP 106
Score = 84.5 bits (178), Expect = 2e-015
Identities = 45/82 (54%), Positives = 47/82 (57%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL F FLISLSV PGSCAAI DHL P A S P L SG R*F+H
Sbjct: 449 SCFLRLVFQ*FLISLSVRPGSCAAIMDHLLPTMAWSWRMDLCSSGVKGPRLMSGRR*FVH 270
Query: 424 LSLQLFPHL*SPASLGTELQQP 359
S QL PH SPASLG+ Q P
Sbjct: 269 RSRQLLPHRFSPASLGSMRQLP 204
Score = 66.1 bits (138), Expect = 6e-010
Identities = 41/114 (35%), Positives = 48/114 (42%)
Frame = +1 / +2
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTS 453
A R * +G G RR +S T + A GA P+S G GA R G GG T G+TS
Sbjct: 119 ARAGRG*RKGRGRRRRTSSSSTTSKPTPPATGACSPSSPG*TGAARAAGCGGRTTSGRTS 298
Query: 454 REGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS*GRK 615
G SP +RSC G RSR GT SR S R+
Sbjct: 299 SAGPSPPKSTSPSSSSTPSSATSGP*SRRSCPAGRTTRSRTTGTPTSRSSSARR 460
>gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020E02f, mRNA sequence
Length = 796
Score = 190 bits (409), Expect = 3e-047
Identities = 71/116 (61%), Positives = 91/116 (78%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K L++G W+ EED+ L N+I +HG G W S+PK AGL RCGKSCRLRWINY
Sbjct: 211 MGRAPCCEKVGLKRGRWTAEEDDILANYIAQHGEGSWRSLPKNAGLLRCGKSCRLRWINY 390
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LR ++RG +++E+DLI++LHA LGNRWS IA+ LPGRTDNEIKN WNS + +++
Sbjct: 391 LRDGVRRGNISKEEDDLIVKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 558
Score = 90.9 bits (192), Expect = 2e-017
Identities = 43/109 (39%), Positives = 62/109 (56%)
Frame = -2 / -2
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
VP +LD ++ W + + PPV + ++ DDEV +LG+ Q+V PPQP L+
Sbjct: 537 VPVVLDFVVRSSW*VAGDQGPPVAKGGMKFDDEVVLLLGDVAPPHPVSQVVDPPQPAALA 358
Query: 404 APLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
P P G R P A+A+L V+ E+++LLR P Q L+AAR PPH
Sbjct: 357 TPQ*PCILG*RPP*ALAVLGNVVCEYVVLLRRPPSPLQPHLLAARRPPH 211
Score = 90.4 bits (191), Expect = 3e-017
Identities = 46/85 (54%), Positives = 49/85 (57%)
Frame = -3 / -3
Query: 595 LMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSL 416
L EF FLISLSV PG AI DHL PR A S PLL LR* IH SL
Sbjct: 548 LRWEFQ*FLISLSVRPGRWLAIRDHLLPRVA*SLTMRSSSSLEMLPLLTPSLR*LIHRSL 369
Query: 415 QLFPHL*SPASLGTELQQPWPCFVM 341
QL PHL SPA LG +L +P PC+ M
Sbjct: 368 QLLPHLSSPAFLGRDLHEPSPCWAM 294
Score = 39.6 bits (80), Expect = 0.062
Identities = 24/59 (40%), Positives = 26/59 (44%)
Frame = +1 / +2
Query: 259 WGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
WGG AA * G RR S T S A A G L+P G+ G R G GG T
Sbjct: 212 WGGRRAARRWG*SGEGGRRRRTTYSQTTLPSTARAHGGLYPRMQGY*GVARAAGCGGST 388
Score = 35.4 bits (71), Expect = 1.1
Identities = 23/62 (37%), Positives = 28/62 (45%)
Frame = -1 / -1
Query: 441 SDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNAS 262
S S ST+A +S T A W ++S S A C V PP + P SA S S
Sbjct: 394 SGS*STAACSSCHTSVALHSWVETSMSPRRAGQCSLRVCRPPPPSTFPASAPPSRSTAPS 215
Query: 261 PS 256
PS
Sbjct: 214 PS 209
>gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101a5 5' similar to typical
P-type R2R3 Myb protein, mRNA sequence
Length = 546
Score = 179 bits (385), Expect = 5e-044
Identities = 69/118 (58%), Positives = 87/118 (73%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K ++KG W+PEED L+++I +HG G W +VP GL RC KSCRLRW NY
Sbjct: 132 MGRPPCCDKVGVKKGPWTPEEDLMLVSYIQEHGPGNWRAVPTNTGLMRCSKSCRLRWTNY 311
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
LRP +KRG F EE LI+ L A+LGNRW+ IA+ LP RTDN+IKN WN+ +KKKL++
Sbjct: 312 LRPXIKRGNFNDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKK 485
Score = 100 bits (214), Expect = 2e-020
Identities = 49/118 (41%), Positives = 72/118 (61%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
L +LLL+ VP +LD++I P Q+ RP V E+ +++DDE+ ++ E +L+ P++V
Sbjct: 485 LLELLLEVGVPVVLDVVIRPLGQVGRYRRPTVAEERLEVDDELLLLVVEVAALDXRPEVV 306
Query: 431 YPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPH 258
PP+P L+AP +P + AP A+L V E +LLR P PL LVAAR PPH
Sbjct: 305 GPPKPAALAAPHQPGVGRHGAPVPGAVLLDVGDEHEVLLRRPGPLLDAHLVAARRPPH 132
Score = 62.5 bits (130), Expect = 8e-009
Identities = 37/86 (43%), Positives = 41/86 (47%)
Frame = -3 / -3
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FI 428
LSFFL F FL+SLSVL G AI PR+A P L G R* +
Sbjct: 481 LSFFLRWVFQ*FLMSLSVLSGK*DAIAAQRLPRSAWRWTMSFSSWSLKLPRLIXGRR*LV 302
Query: 427 HLSLQLFPHL*SPASLGTELQQPWPC 350
H S QL H SP +GT Q P PC
Sbjct: 301 HRSRQLLLHRISPVLVGTARQFPGPC 224
Score = 55.6 bits (115), Expect = 9e-007
Identities = 40/118 (33%), Positives = 47/118 (39%)
Frame = +1 / +1
Query: 250 ALRWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG 429
A WGG+ AAT + RG G RR S T +S A GA + G GA R G GG
Sbjct: 124 AAPWGGLRAATRWASRRGPGRRRRTSCSSPTSRSTAPGTGAPCRPTPG*CGAARAAGFGG 303
Query: 430 *TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXXQRSCQGGLIMRSRIYGTRASRRS 603
T G+ S S + +C G I SR GT SRRS
Sbjct: 304 PTTSGRXSSAATSTTRRRSSSSTSRRSSATVGRR*RPTCPRGRITTSRTTGTPTSRRS 477
Score = 35.4 bits (71), Expect = 1.1
Identities = 24/65 (36%), Positives = 30/65 (46%)
Frame = -1 / -1
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A S ST A +S T A+ + +SS G A C PP +RAP C S A
Sbjct: 318 AGGSWSTEAGSSCCTASARCWSARRASSRGRAPGCRRRA*GPPPASRAPS*RPPCRSTEA 139
Query: 264 SPSQR 250
SP +R
Sbjct: 138 SPWRR 124
Score = 32.2 bits (64), Expect(2) = 0.38
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2 / +2
Query: 260 GEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
GEA +L Q ++GAL GG H A P L + A V++EL A VD+L
Sbjct: 134 GEASVLRQGGRQEGALDAGGGPHARLLHPGARPRELARRADQHRADAVQQELPASVDQL 310
Score = 22.1 bits (42), Expect(2) = 0.38
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2 / +2
Query: 545 ARED***DQESMELVHQEEAEAE 613
ARED * QE +E QEEA+ +
Sbjct: 419 AREDG*RHQELLEHPPQEEAQED 487
>gb|BQ471469.1|BQ471469 HV02I08r HV Hordeum vulgare subsp. vulgare cDNA clone HV02I08
5-PRIME, mRNA sequence
Length = 593
Score = 117 bits (251), Expect(2) = 7e-044
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = +3 / +2
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
RKGLWSPEED+KL ++I +HGHGCWS++P AGLQR GKSCRLRWINYLRP LK G
Sbjct: 161 RKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHG 328
Score = 81.3 bits (171), Expect(2) = 7e-044
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +3 / +3
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+EE+ ++ LHA LGN+WS+IA LPGRTDNE+KN WNS +KK++ PN+ P
Sbjct: 342 EEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGGKGAPNSPAP 509
Score = 66.1 bits (138), Expect(2) = 6e-019
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2 / -2
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
L+ PQ+V PPQP L+ PL+P G RAPAA+A+ VI E L+LLR P+PL
Sbjct: 322 LQPRPQVVDPPQPAALAVPLEPGFSGKRAPAAVAVPENVIAELLVLLRRPQPL 164
Score = 51.9 bits (107), Expect(2) = 2e-012
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
P G R* IH SLQL P SPA G+ LQQPWPC
Sbjct: 327 PCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQPWPC 217
Score = 49.2 bits (101), Expect(2) = 6e-019
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 503
+ FL EF FL SLSVLPG C AI DHL PR A
Sbjct: 472 TLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRAA 371
Score = 40.9 bits (83), Expect(2) = 2e-012
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQ 498
LL+ VP +LDL++ PP Q+ C+ RP V E V+
Sbjct: 467 LLEVGVPVVLDLVVGPPRQMPCDPRPLVAEGGVE 366
Score = 40.5 bits (82), Expect = 0.033
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = -1 / -1
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
A+ S ST+A +S R+ A+ E SSS G A C+ S PP T AP +SA +S+
Sbjct: 311 AAGS*STAACSSCRSAGARL*REARSSSRGRAGECNRGASGPPPATTAPSGSSAWASR 138
Score = 40.5 bits (82), Expect(2) = 1e-004
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2 / +1
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
QAE +GA+V GG E H+ A P LLE S+ A R+EL A VD+L
Sbjct: 148 QAELPEGAVVAGGGPEAPRLHSPARPRLLERASR*SRAPAERQELQAAVDQL 303
Score = 26.3 bits (51), Expect(2) = 1e-004
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2 / +2
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVV + +A A ED QE +EL+ QEE + +Q +A
Sbjct: 383 QQVVEDRTAFAGEDRQRGQELLELLPQEEGRGRQGSAQLARA 508
>gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9c13 5', mRNA sequence
Length = 506
Score = 177 bits (381), Expect = 2e-043
Identities = 68/106 (64%), Positives = 85/106 (80%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L +G + EED L+ HI +HGH W ++P AGL RCGKSCRLRWINYLRPD+KRG F
Sbjct: 5 LXRGRGTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWINYLRPDIKRGNFT 184
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
+EE II+LHA+LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L+
Sbjct: 185 SEEEGAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLQ 322
Score = 77.6 bits (163), Expect = 2e-013
Identities = 38/96 (39%), Positives = 55/96 (57%)
Frame = -2 / -2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP + N P V E V+LDD + GE +L+V Q+V PP+
Sbjct: 313 LLEVCVPDVLDLVVRPPRKPGGNGGPSVAEHGVELDDGALLLAGEVAALDVGAQVVDPPE 134
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLR 312
T L+A + R P A+A+L V H+ +LLR
Sbjct: 133 ATALAAAQQAGLIRQRPPVAVAVLLDVSHQGHVLLR 26
Score = 71.6 bits (150), Expect = 1e-011
Identities = 41/88 (46%), Positives = 43/88 (48%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL FLISLSVLPGS AA+ DHL P A S P L SG R* IH
Sbjct: 318 SRFLRCVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMAPSSSLVKLPRLMSGRR*LIH 139
Query: 424 LSLQLFPHL*SPASLGTELQQPWPCFVM 341
QL P PA G+ Q WPC M
Sbjct: 138 RRRQLLPQRSRPA*FGSARQLLWPCCSM 55
>gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009G13f, mRNA sequence
Length = 673
Score = 176 bits (378), Expect = 5e-043
Identities = 67/99 (67%), Positives = 83/99 (83%)
Frame = +3 / +2
Query: 309 SPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDL 488
+PEED+ L+ HI HGHG W ++PK AGL RCGKSCRLRWINYLRPD+KRG F+ +EE
Sbjct: 2 TPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSDEEEQS 181
Query: 489 IIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
II+LH +LGNRWS IAA+LPGRTDN IKN+W++ +KK+L
Sbjct: 182 IIQLHQLLGNRWSAIAARLPGRTDN*IKNVWHTHLKKRL 298
Score = 99.1 bits (210), Expect = 7e-020
Identities = 45/96 (46%), Positives = 61/96 (63%)
Frame = -2 / -1
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 292 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 113
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLR 312
P L+AP KP G RAP A+A+ V + L+LLR
Sbjct: 112 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLVLLR 5
Score = 86.3 bits (182), Expect = 5e-016
Identities = 45/84 (53%), Positives = 47/84 (55%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLI LSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 297 SRFLRWVCHTFLI*LSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 118
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 117 RSRQLLPHRRSPACLGSARQLPWP 46
>gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013M24f, mRNA sequence
Length = 471
Score = 170 bits (365), Expect = 3e-041
Identities = 63/95 (66%), Positives = 77/95 (81%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K KG W+ EED++L+ +I HG GCW S+PK AGL RCGKSCRLRWINYLRPDLKRG
Sbjct: 187 KAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRG 366
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
F ++E++LII+LH +LGN+WS IA +LPGRTDNE
Sbjct: 367 NFTEEEDELIIKLHELLGNKWSLIAGRLPGRTDNE 471
Score = 95.5 bits (202), Expect = 9e-019
Identities = 45/87 (51%), Positives = 55/87 (63%)
Frame = -2 / -1
Query: 566 LIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPS 387
L++ PP Q + RP V E V+LDDE+ +LGE P LEV PQ+V PPQP L AP +P
Sbjct: 471 LVVRPPRQPPGDERPLVAEQLVELDDELVLLLGEVPPLEVRPQVVDPPQPAALPAPQQPC 292
Query: 386 EFGNRAPAAMAMLCYVIHEFLILLRGP 306
FG PAA+AM V E L+LL GP
Sbjct: 291 GFGEGPPAALAMGLDVGDEALVLLLGP 211
Score = 86.3 bits (182), Expect = 5e-016
Identities = 42/75 (56%), Positives = 48/75 (64%)
Frame = -3 / -2
Query: 565 SLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPA 386
SLSVLPGS A+ DHL P ++ S P LRSGLR* IH SLQLFPH SPA
Sbjct: 470 SLSVLPGSLPAMSDHLLPSSSWSLMMSSSSSSVKFPRLRSGLR*LIHRSLQLFPHRSSPA 291
Query: 385 SLGTELQQPWPCFVM 341
+LG +LQQP P +M
Sbjct: 290 ALGRDLQQPSPWALM 246
Score = 36.8 bits (74), Expect = 0.42
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = -1 / -3
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTR 304
+*G AS S ST+A +S RT A R+W +SSS H C + PP +R
Sbjct: 361 A*GPASGS*STAACSSSRTAAALRLWGGTSSSPRHGP*CRRRGAGPPPWSR 209
>emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcription factor
Length = 1180
Score = 170 bits (365), Expect = 3e-041
Identities = 64/92 (69%), Positives = 78/92 (84%)
Frame = +3 / +3
Query: 330 LMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAV 509
L+ HI HGHG W ++PK AGL RCGKSCRLRWINYLRPD+KRG F+ +EE II+LH +
Sbjct: 69 LVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSDEEEQSIIQLHQL 248
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 249 LGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 344
Score = 93.2 bits (197), Expect = 5e-018
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL+ VP +LDL++ PP Q N P V E VQLDD + ++GE +L+V PQ+V PP+
Sbjct: 338 LLEVGVPHVLDLVVRPPRQPGGNRGPSVAEQLVQLDD*LLLLVGEVAALDVRPQVVDPPE 159
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLIL 318
P L+AP KP G RAP A+A+ V + L L
Sbjct: 158 PAALAAPQKPGLLGQRAPVAVAVAVDVCDQDLAL 57
Score = 90.0 bits (190), Expect = 4e-017
Identities = 46/84 (54%), Positives = 48/84 (57%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
S FL H FLISLSVLPGS AAI DHL P + C S P L SG R* IH
Sbjct: 343 SRFLRWVCHTFLISLSVLPGSLAAIADHLLPSSWCSWMIDCSSSSEKLPRLMSGRR*LIH 164
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
S QL PH SPA LG+ Q PWP
Sbjct: 163 RSRQLLPHRRSPACLGSARQLPWP 92
>gb|AL507585.1|AL507585 AL507585 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06E05V 5',
mRNA sequence
Length = 666
Score = 169 bits (364), Expect = 4e-041
Identities = 62/104 (59%), Positives = 82/104 (78%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
KG W+ ED L+NH+ +HG G W++V ++ GL RCGKSCRLRW N+LRP+LK+GAF+ D
Sbjct: 5 KGXWTAAEDALLVNHVRQHGEGNWNAVQRITGLLRCGKSCRLRWTNHLRPNLKKGAFSPD 184
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
EE LI +LHA LGN+W+++A LPGRTDNEIKN WN+ K++ R
Sbjct: 185 EELLIAQLHAQLGNKWARMATHLPGRTDNEIKNYWNTRAKRRQR 316
Score = 70.7 bits (148), Expect = 3e-011
Identities = 37/100 (37%), Positives = 55/100 (55%)
Frame = -2 / -3
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L RVP +LDL++ PP Q+ + P V E V+L DE V E LEV ++V P Q
Sbjct: 304 LGPRVPVVLDLVVRPPRQMGGHAGPLVAELGVELRDEELLVRREGALLEVGAEVVGPAQA 125
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
L+A + + + P A+A+L +V+H+ + R P PL
Sbjct: 124 AALAAAQETGDALHGVPVALAVLPHVVHQQGVFGRRPXPL 5
Score = 55.1 bits (114), Expect = 1e-006
Identities = 32/78 (41%), Positives = 34/78 (43%)
Frame = -3 / -1
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F FLISLSVLPG A+ HL P A S AP LR G R + QL P
Sbjct: 291 FQ*FLISLSVLPGRWVAMRAHLLPSWAWSCAMRSSSSGEKAPFLRLGRRWLVQRRRQLLP 112
Query: 403 HL*SPASLGTELQQPWPC 350
P T Q P PC
Sbjct: 111 QRRRPVMRCTAFQLPSPC 58
>gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. vulgare cDNA clone HP05O05
5-PRIME, mRNA sequence
Length = 520
Score = 167 bits (360), Expect = 1e-040
Identities = 63/112 (56%), Positives = 86/112 (76%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
+LR+G W+ +ED L+N+I+ HG G W+++ + AGL+R GKSCRLRW+NYLRPD+KRG F
Sbjct: 136 ELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLRRTGKSCRLRWLNYLRPDVKRGNF 315
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
DE+ LI++LH+ GNRWS+IA LPGRTDNEIKN W + ++K +Q D
Sbjct: 316 TADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKHAKQLNCD 471
Score = 76.2 bits (160), Expect = 6e-013
Identities = 37/108 (34%), Positives = 60/108 (55%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
+LL P +LDL++ P ++ +LRPPV V+++DE V GE +L V ++V PP
Sbjct: 450 VLLHPGPPVVLDLVVRPTREVLRDLRPPVTPARVEVEDEELLVGGEVAALHVGAEVVQPP 271
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
QP L + R PAA+A++ V+ + +L+ P P +L L+
Sbjct: 270 QPAALPRAPQAGGPRQRVPAALAVIRDVVDQRKVLVHRPRPPPELRLL 127
Score = 62.9 bits (131), Expect = 6e-009
Identities = 35/86 (40%), Positives = 40/86 (46%)
Frame = -3 / -3
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*F 431
C + F FLISLSV PG C AI DH P+ S P SG R*F
Sbjct: 458 CFACFCTLVLQ*FLISLSVRPGRCCAIFDHRLPQREWRSRMRSCSSAVKLPRFTSGRR*F 279
Query: 430 IHLSLQLFPHL*SPASLGTELQQPWP 353
H S QLFP PA+ + Q+P P
Sbjct: 278 SHRSRQLFPVRLRPAARASAFQRPSP 201
>gb|CV063055.1|CV063055 BNEL86b3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86b3 5' similar to
OSJNBb0039L24.8, mRNA sequence
Length = 715
Score = 167 bits (359), Expect = 2e-040
Identities = 63/109 (57%), Positives = 81/109 (74%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
K RKGLWSP ED+KL ++I +HGHGCWS++ AGLQR GKSCRLRWINYLR LK G
Sbjct: 127 KPSYRKGLWSPVEDQKLRDYILRHGHGCWSALTAKAGLQRNGKSCRLRWINYLRAGLKHG 306
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
F+ +EE+ + LHA LGN+WS I +P RTDN++KN WN + K+++
Sbjct: 307 MFSPEEEETEMSLHAALGNKWSWIERNMPLRTDNDVKNYWNCYL*KRVQ 453
Score = 81.7 bits (172), Expect = 1e-014
Identities = 40/79 (50%), Positives = 43/79 (54%)
Frame = -3 / -3
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLF 407
+F FL SLSVL G +I DHLFPR AC S N P R* IH SLQL
Sbjct: 431 QFQ*FLTSLSVLNGIFRSIHDHLFPRAACRLISVSSSSGENIPCFSPARR*LIHRSLQLL 252
Query: 406 PHL*SPASLGTELQQPWPC 350
P SPA + LQQPWPC
Sbjct: 251 PFRWSPALAVSALQQPWPC 195
Score = 62.9 bits (131), Expect = 6e-009
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = -2 / -2
Query: 455 LEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
L+ PQ+V PPQP L+ PL+P G RAPAA+A+ VI E L+L R P+PL
Sbjct: 300 LQPRPQVVDPPQPAALAVPLEPGFSGKRAPAAVAVPENVIAELLVLHRRPQPL 142
Score = 35.9 bits (72), Expect = 0.79
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2 / +3
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
QAE +GA+V GG + H+ A P LLE + A R+EL A VD+L
Sbjct: 126 QAELPEGAVVAGGGPKAPRLHSPARPRLLERAYR*SRAPAERQELQAAVDQL 281
>gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. vulgare cDNA clone HT08P20
5-PRIME, mRNA sequence
Length = 569
Score = 166 bits (358), Expect = 3e-040
Identities = 62/103 (60%), Positives = 83/103 (80%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED L++++ KHG G W++V K GL RCGKSCRLRW N+LRP+LK+GAF
Sbjct: 173 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 352
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
+EE LII+LH+ +GN+W+++AA LPGRTDNEIKN WN+ IK+
Sbjct: 353 PEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 481
Score = 92.3 bits (195), Expect = 9e-018
Identities = 43/102 (42%), Positives = 61/102 (59%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L + VP IL +IS PWQ+ + P V V+LDDE + GE P LEV P++V PP+
Sbjct: 478 LYSSVPVILYFVISTPWQMSGHPSPLVAHLGVELDDEPLLLGGEGPLLEVGPEVVRPPEA 299
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
L+AP +P +R P +A+L +V+H+ +L R P PL Q
Sbjct: 298 AALAAPEQPGVLLHRVPVPLAVLLHVVHQDGVLRRRPGPLLQ 173
Score = 66.6 bits (139), Expect = 5e-010
Identities = 37/79 (46%), Positives = 37/79 (46%)
Frame = -3 / -3
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F F ISLSV PG AAI HL P S AP LR GLR F H QL P
Sbjct: 465 FQ*FFISLSVRPGK*AAIRAHLLPILEWSWMMSLSSSGVKAPFLRLGLRWFAHRRRQLLP 286
Query: 403 HL*SPASLGTELQQPWPCF 347
H SP T Q P PCF
Sbjct: 285 HRNSPVFFCTAFQFPSPCF 229
>gb|CA014662.1|CA014662 HT11P22r HT Hordeum vulgare subsp. vulgare cDNA clone HT11P22
5-PRIME, mRNA sequence
Length = 613
Score = 166 bits (358), Expect = 3e-040
Identities = 62/103 (60%), Positives = 83/103 (80%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED L++++ KHG G W++V K GL RCGKSCRLRW N+LRP+LK+GAF
Sbjct: 183 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 362
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
+EE LII+LH+ +GN+W+++AA LPGRTDNEIKN WN+ IK+
Sbjct: 363 PEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 491
Score = 92.3 bits (195), Expect = 9e-018
Identities = 43/102 (42%), Positives = 61/102 (59%)
Frame = -2 / -3
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L + VP IL +IS PWQ+ + P V V+LDDE + GE P LEV P++V PP+
Sbjct: 488 LYSSVPVILYFVISTPWQMSGHPSPLVAHLGVELDDEPLLLGGEGPLLEVGPEVVRPPEA 309
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
L+AP +P +R P +A+L +V+H+ +L R P PL Q
Sbjct: 308 AALAAPEQPGVLLHRVPVPLAVLLHVVHQDGVLRRRPGPLLQ 183
Score = 66.6 bits (139), Expect = 5e-010
Identities = 37/79 (46%), Positives = 37/79 (46%)
Frame = -3 / -1
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F F ISLSV PG AAI HL P S AP LR GLR F H QL P
Sbjct: 475 FQ*FFISLSVRPGK*AAIRAHLLPILEWSWMMSLSSSGVKAPFLRLGLRWFAHRRRQLLP 296
Query: 403 HL*SPASLGTELQQPWPCF 347
H SP T Q P PCF
Sbjct: 295 HRNSPVFFCTAFQFPSPCF 239
>gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. vulgare cDNA clone HP02B11
5-PRIME, mRNA sequence
Length = 637
Score = 166 bits (358), Expect = 3e-040
Identities = 63/107 (58%), Positives = 83/107 (77%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
++KG W+PEED L+++I +HG G W SVP+ GL RC KSCRLRW NYLRP +KRG F
Sbjct: 168 VKKGPWTPEEDIILVSYIQQHGPGNWRSVPENTGLMRCSKSCRLRWTNYLRPGIKRGNFT 347
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
Q EE +II L A+LGN+W+ IA+ LP RTDN+IKN WN+ +KKK+++
Sbjct: 348 QHEEGIIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKVKR 488
Score = 78.5 bits (165), Expect = 1e-013
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FF F FL+SLSVL G AI HL P AC W PLL GLR* +H
Sbjct: 481 TFFFKCVFQ*FLMSLSVLCGR*EAIAAHLLPSNACRCMIIPSSCWVKFPLLIPGLR*LVH 302
Query: 424 LSLQLFPHL*SPASLGTELQQPWPC 350
SLQL HL +P GT+ Q P PC
Sbjct: 301 RSLQLLLHLINPVFSGTDRQFPGPC 227
Score = 71.2 bits (149), Expect = 2e-011
Identities = 38/101 (37%), Positives = 54/101 (53%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
LL VP + D++I W++ P V + + + D F VLGE PSL+ ++V PPQ
Sbjct: 476 LLQVCVPVVFDVVICSLWEVGGYCCPLVAKQCL*VYDYPFLVLGEVPSLDPGSEVVGPPQ 297
Query: 419 PTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
PT L+AP +P + P ML V + +LLR P PL
Sbjct: 296 PTALAAPHQPRVLRHGPPVPRPMLLDVGDKDDVLLRRPWPL 174
>emb|X87690.1|HVRNAGAM1 H.vulgare mRNA for GAMyb protein
Length = 2263
Score = 166 bits (358), Expect = 3e-040
Identities = 62/103 (60%), Positives = 83/103 (80%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED L++++ KHG G W++V K GL RCGKSCRLRW N+LRP+LK+GAF
Sbjct: 398 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 577
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
+EE LII+LH+ +GN+W+++AA LPGRTDNEIKN WN+ IK+
Sbjct: 578 PEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 706
Score = 89.5 bits (189), Expect = 6e-017
Identities = 43/102 (42%), Positives = 60/102 (58%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L + VP IL IIS PWQ+ + P V V+LDDE + GE P LEV P++V PP+
Sbjct: 703 LYSSVPVILYFIISTPWQMSGHPSPLVAHLGVELDDEPLLLGGEGPLLEVGPEVVRPPEA 524
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
L+AP +P +R P +A+L +V+H+ +L P PL Q
Sbjct: 523 AALAAPEQPGVLLHRVPVPLAVLLHVVHQDGVLRGRPGPLLQ 398
Score = 66.6 bits (139), Expect = 5e-010
Identities = 37/79 (46%), Positives = 37/79 (46%)
Frame = -3 / -2
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F F ISLSV PG AAI HL P S AP LR GLR F H QL P
Sbjct: 690 FQ*FFISLSVRPGK*AAIRAHLLPILEWSWMMSLSSSGVKAPFLRLGLRWFAHRRRQLLP 511
Query: 403 HL*SPASLGTELQQPWPCF 347
H SP T Q P PCF
Sbjct: 510 HRNSPVFFCTAFQFPSPCF 454
>gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. vulgare cDNA clone HS02O24
5-PRIME, mRNA sequence
Length = 363
Score = 166 bits (357), Expect = 4e-040
Identities = 62/110 (56%), Positives = 82/110 (74%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
+++KG W+PEED L++++ +HG G W +VP GL RC KSCRLRW NYLRP +KRG F
Sbjct: 8 RVKKGPWTPEEDLVLVSYVQEHGPGNWRAVPTRTGLMRCSKSCRLRWTNYLRPGIKRGNF 187
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
EE LI+ L A+LGNRW+ IA+ LP RTDN+IKN WN+ +K+KL+ G
Sbjct: 188 TDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKRKLQAGG 337
Score = 81.7 bits (172), Expect = 1e-014
Identities = 38/103 (36%), Positives = 62/103 (60%)
Frame = -2 / -3
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
QL L+ RVP +LD+++ ++ + PPV E +++DDE+ ++GE +L+ Q+V P
Sbjct: 325 QLALEVRVPVVLDVVVGALGEVGGDRGPPVAEQRLEVDDELLLLVGEVAALDPRAQVVGP 146
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
P+P L+AP + G+ AP + A+L V E +LLR P L
Sbjct: 145 PEPAALAAPHQAGAGGDGAPVSGAVLLDVGDEHEVLLRRPGAL 17
>emb|X70880.1|HVMYB2G H.vulgare Myb2 gene
Length = 1093
Score = 151 bits (325), Expect(2) = 4e-040
Identities = 55/88 (62%), Positives = 69/88 (78%)
Frame = +3 / +1
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K+ KG W+ EED++L+ +I +G GCW S+PK AGL RCGKSCRLRW+NY
Sbjct: 646 MGRSPCCEKEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNY 825
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNR 521
LRPDLKRG F DE++LII LH++LGN+
Sbjct: 826 LRPDLKRGNFTDDEDELIIRLHSLLGNK 909
Score = 87.7 bits (185), Expect(2) = 5e-018
Identities = 40/97 (41%), Positives = 60/97 (61%)
Frame = -2 / -2
Query: 518 VPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYV 339
V E++V+ DDE+ V+GE + EV ++V+P + L+A + G RAPAA+A+ V
Sbjct: 906 VAEEAVEADDELVLVVGEVAAFEVGAEVVHPAEAAALAAAQQARRLGQRAPAALAVGPDV 727
Query: 338 IHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLGAP 228
+ L+LL GP PL +LL+AAR PPH ++ AP
Sbjct: 726 GDQPLVLLLGPRPLVGVLLLAARRPPHAGRSDSILAP 616
Score = 47.8 bits (98), Expect(2) = 1e-005
Identities = 26/61 (42%), Positives = 30/61 (49%)
Frame = -3 / -3
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFV 344
+L PR S P LRSG R*FI QL P PA+LG+E QQP P +
Sbjct: 911 YLLPRRLWRRMMSSSSSSVKLPRLRSGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLAL 732
Query: 343 M 341
M
Sbjct: 731 M 729
Score = 39.1 bits (79), Expect(2) = 4e-040
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 519 RWSQIAAQLPGRTDNEI 569
RWS IA QLPGRTDNEI
Sbjct: 1043 RWSLIAGQLPGRTDNEI 1093
Score = 29.0 bits (57), Expect(2) = 5e-018
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 568 ISLSVLPGSCAAI*DHL 518
ISLSVLPGS A+ DHL
Sbjct: 1092 ISLSVLPGSWPAMRDHL 1042
Score = 22.1 bits (42), Expect(2) = 1e-005
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2 / -1
Query: 569 DLIISPPWQLRCNLRPPVPED 507
DL++ P QL + RPP ++
Sbjct: 1093 DLVVRPARQLAGDERPPARDE 1031
>gb|CA019195.1|CA019195 HV11C18r HV Hordeum vulgare subsp. vulgare cDNA clone HV11C18
5-PRIME, mRNA sequence
Length = 583
Score = 166 bits (356), Expect = 5e-040
Identities = 62/90 (68%), Positives = 78/90 (86%)
Frame = +3 / +2
Query: 375 VPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGR 554
+PK AGL RCGKSCRLRWINYLRPDLKRG F+ +E++LII+LH++LGN+WS IA +LPGR
Sbjct: 11 LPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGR 190
Query: 555 TDNEIKNLWNSCIKKKLRQKGIDPNTHKPL 644
TDNEIKN WN+ I++KL +GIDP TH+ +
Sbjct: 191 TDNEIKNYWNTHIRRKLTSRGIDPVTHRAI 280
Score = 86.8 bits (183), Expect = 4e-016
Identities = 44/87 (50%), Positives = 48/87 (55%)
Frame = -3 / -2
Query: 634 WVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPL 455
WV GS+P +SF M F FLISLSVLPGS AI DHL PR SW P
Sbjct: 270 WVTGSIPRLVSFLRMCVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSSWLKLPR 91
Query: 454 LRSGLR*FIHLSLQLFPHL*SPASLGT 374
LRSG R* I QL P PA+LG+
Sbjct: 90 LRSGRR*LIQRRRQLLPQRSRPAALGS 10
Score = 59.3 bits (123), Expect = 7e-008
Identities = 29/78 (37%), Positives = 46/78 (58%)
Frame = -2 / -1
Query: 635 VGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPS 456
VG ++ QL D RVP +LDL++ PP Q P V +++V+LDDE+ ++ E +
Sbjct: 271 VGHRVDPPARQLPPDVRVPVVLDLVVRPPRQSPGYQGPFVAQEAVELDDELVLLVAEVAA 92
Query: 455 LEVWPQIVYPPQPTTLSA 402
LEV ++V P + L+A
Sbjct: 91 LEVGAEVVDPAEAAALAA 38
>gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025K10f, mRNA sequence
Length = 718
Score = 164 bits (353), Expect = 1e-039
Identities = 62/112 (55%), Positives = 84/112 (75%)
Frame = +3 / +3
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
+LR+G W+ +ED L+N+I+ HG G W+++ + AGL+R GKSCRLRW+NYLRPD+KRG F
Sbjct: 129 ELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLRRTGKSCRLRWLNYLRPDVKRGNF 308
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
DE+ LI++LH+ GNRWS+IA LPGRTDNEIKN W + + K + D
Sbjct: 309 TADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVPKHAKHLNCD 464
Score = 74.4 bits (156), Expect = 2e-012
Identities = 35/101 (34%), Positives = 57/101 (56%)
Frame = -2 / -3
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDL++ P ++ +LRPPV V+++DE V GE +L V ++V PPQP L
Sbjct: 422 PVVLDLVVRPTRKVLRDLRPPVTPARVEVEDEELLVGGEVAALHVGAEVVQPPQPAALPR 243
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLV 279
+ R PAA+A++ V+ + +L+ P P +L L+
Sbjct: 242 APQAGGPRQRVPAALAVIRDVVDQRKVLVHRPRPPPELRLL 120
Score = 61.6 bits (128), Expect = 1e-008
Identities = 33/74 (44%), Positives = 37/74 (50%)
Frame = -3 / -1
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PG C AI DH P+ S P SG R*F H S QLFP
Sbjct: 415 FLISLSVRPGRCCAIFDHRLPQREWRSRMRSCSSAVKLPRFTSGRR*FSHRSRQLFPVRL 236
Query: 394 SPASLGTELQQPWP 353
PA+ + Q+P P
Sbjct: 235 RPAARASAFQRPSP 194
>gb|CA019900.1|CA019900 HV13K14r HV Hordeum vulgare subsp. vulgare cDNA clone HV13K14
5-PRIME, mRNA sequence
Length = 465
Score = 162 bits (348), Expect = 7e-039
Identities = 60/101 (59%), Positives = 81/101 (80%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
+G W+ ED L++++ KHG G W++V K GL RCGKSCRLRW N+LRP+LK+GAF +
Sbjct: 30 EGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTPE 209
Query: 477 EEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
EE LII+LH+ +GN+W+++AA LPGRTDNEIKN WN+ IK+
Sbjct: 210 EERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 332
Score = 90.9 bits (192), Expect = 2e-017
Identities = 42/100 (42%), Positives = 60/100 (60%)
Frame = -2 / -2
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L + VP IL +IS PWQ+ + P V V+LDDE + GE P LEV P++V PP+
Sbjct: 329 LYSSVPVILYFVISTPWQMSGHPSPLVAHLGVELDDEPLLLGGEGPLLEVGPEVVRPPEA 150
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
L+AP +P +R P +A+L +V+H+ +L R P PL
Sbjct: 149 AALAAPEQPGVLLHRVPVPLAVLLHVVHQDGVLRRRPGPL 30
Score = 66.6 bits (139), Expect = 5e-010
Identities = 37/79 (46%), Positives = 37/79 (46%)
Frame = -3 / -3
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFP 404
F F ISLSV PG AAI HL P S AP LR GLR F H QL P
Sbjct: 316 FQ*FFISLSVRPGK*AAIRAHLLPILEWSWMMSLSSSGVKAPFLRLGLRWFAHRRRQLLP 137
Query: 403 HL*SPASLGTELQQPWPCF 347
H SP T Q P PCF
Sbjct: 136 HRNSPVFFCTAFQFPSPCF 80
>gb|BQ764651.1|BQ764651 EBca01_SQ004_C14_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_C14 5', mRNA sequence
Length = 576
Score = 155 bits (333), Expect = 8e-037
Identities = 58/104 (55%), Positives = 80/104 (76%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
+RKG W+ EED L+ +I++HG G W ++ + AGL R GKSCRLRW+NYLRP L+RG+ +
Sbjct: 97 VRKGPWTLEEDLILVGYISQHGEGSWDNLARSAGLNRNGKSCRLRWLNYLRPGLRRGSIS 276
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
+E+ +I ELH+ LGN+WS+IA LPGRTDNE+KN W + + KK
Sbjct: 277 PEEDMVIRELHSRLGNKWSEIAKHLPGRTDNEVKNYWRTRVHKK 408
Score = 70.3 bits (147), Expect = 4e-011
Identities = 38/89 (42%), Positives = 42/89 (47%)
Frame = -3 / -2
Query: 613 FCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR* 434
+C +F FL SLSV PG C AI DHLFP S P GLR*
Sbjct: 419 WCGAFLCTLVLQ*FLTSLSVRPGRCLAISDHLFPSLEWSSRMTMSSSGEMLPRRNPGLR* 240
Query: 433 FIHLSLQLFPHL*SPASLGTELQQPWPCF 347
F H SLQLFP PA Q+P PC+
Sbjct: 239 FSHRSLQLFPFRFRPAERARLSQEPSPCW 153
Score = 59.7 bits (124), Expect = 5e-008
Identities = 30/104 (28%), Positives = 56/104 (53%)
Frame = -2 / -1
Query: 605 QLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
+LL+ P +LDL++ P ++ +L P VP+ V+L D+ + + + + P++V P
Sbjct: 411 RLLVYPGPPVVLDLVVGPAGEVLGDLGPFVPQPRVELPDDHVLLRRDAAAPQPRPEVV*P 232
Query: 425 PQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLS 294
PQP L P++ S P A +L + ++ +LL+ P L+
Sbjct: 231 PQPAALPVPVQTSRACEVVPRAFPVLGDIPNQDEVLLQRPRTLA 100
>gb|BI956816.1|BI956816 HVSMEn0005H11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005H11f, mRNA sequence
Length = 917
Score = 155 bits (332), Expect = 1e-036
Identities = 63/107 (58%), Positives = 72/107 (67%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
EMGR CC K L+KG W+ EED KL+ + HGH CW VPKLAGL RCGKSCRLRW N
Sbjct: 105 EMGRQPCCEKVGLKKGPWTAEEDXKLVAFLLSHGHCCWRLVPKLAGLLRCGKSCRLRWTN 284
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKN 575
YLRPDLKRG + DEE L+I+LH+ LGNR A G T + N
Sbjct: 285 YLRPDLKRGLLSDDEERLVIDLHSQLGNRCVCPARSTTGGTHVRVVN 425
Score = 68.0 bits (142), Expect(3) = 9e-019
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -2 / -1
Query: 521 PVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAM 351
PV E V++DDE V+GE LEV PQ+V PPQ L AP +P E G+ PAAMA+
Sbjct: 371 PVAELRVEVDDEPLLVVGEEAPLEVGPQVVGPPQAAALPAPQQPCELGDEPPAAMAV 201
Score = 67.5 bits (141), Expect = 2e-010
Identities = 31/57 (54%), Positives = 32/57 (56%)
Frame = -3 / -2
Query: 523 HLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
HL P S P LRSG R* +HL QLFPHL SPASLGT LQQ WP
Sbjct: 373 HLLPSCEWRSMTSLSSSSERRPRLRSGRR*LVHLRRQLFPHLSSPASLGTSLQQQWP 203
Score = 47.8 bits (98), Expect(2) = 2e-010
Identities = 30/72 (41%), Positives = 35/72 (48%)
Frame = +1 / +1
Query: 256 RWGGILAATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*T 435
RW G AA +* R G RR +S + A+AAG P+S G GA R *GG T
Sbjct: 106 RWAGSRAARRWA*RRARGRRRRTXSSSPSSSPTAIAAGGSSPSSQGC*GAGRAAA*GGPT 285
Query: 436 I*GQTSREGHSP 471
G TS SP
Sbjct: 286 TCGPTSSGASSP 321
Score = 42.8 bits (87), Expect(2) = 2e-010
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +3 / +1
Query: 516 NRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 617
+R S+IAA+LPGRTD IKN WN+ I++ ++ G
Sbjct: 460 SRRSKIAARLPGRTDT*IKNHWNTHIRE*AQEDG 561
Score = 37.7 bits (76), Expect = 0.22
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2 / +2
Query: 257 DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
DG+A +L + E+G + GG P LLE Q R A++VR+EL EVD+L
Sbjct: 107 DGQAAVLREGGPEEGPVDGGGGPXARRLPPLPRPLLLEARPQARRAAEVREELPPEVDQL 286
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1 / -3
Query: 456 S*GLASDSLSTSAYNSFRTFEAQRVWEQSSSSHG 355
+*G A+ S STS +S RT A R W ++SSS+G
Sbjct: 306 A*GRAAGSWSTSGGSSSRTSAALRAWGRASSSNG 205
Score = 32.7 bits (65), Expect(3) = 9e-019
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2 / -1
Query: 332 EFLILLRGPEPLSQLLLVAARMPPHL 255
E +LLR P L Q L+AAR+P HL
Sbjct: 182 ELXVLLRRPRALLQAHLLAARLPAHL 105
Score = 31.3 bits (62), Expect(3) = 9e-019
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
++ LM F FLI +SVLPGS AAI D L
Sbjct: 548 AYSLMWVFQWFLI*VSVLPGSRAAILDLL 462
>gb|BQ753632.1|BQ753632 EBan01_SQ004_M23_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_M23 5', mRNA sequence
Length = 416
Score = 154 bits (331), Expect = 1e-036
Identities = 53/93 (56%), Positives = 77/93 (82%)
Frame = +3 / +3
Query: 330 LMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAV 509
L++H+ +HG G W++V + GLQRCGKSCRLRW N+LRP+L++G F+ +EE LI+ LH +
Sbjct: 3 LLDHVRRHGEGNWNAVRRETGLQRCGKSCRLRWANHLRPNLRKGPFSPEEERLILRLHGL 182
Query: 510 LGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
+GN+W++I+AQLPGRTDNE+KN WN+ K++ R
Sbjct: 183 IGNKWARISAQLPGRTDNEVKNYWNTRFKRRQR 281
Score = 79.0 bits (166), Expect = 9e-014
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQP 417
L+ARVP +LDL++ PP QL + RP V +++V+ +DE + GE EV ++V PP+P
Sbjct: 269 LEARVPVVLDLVVRPPGQLC*DARPLVADEAVEAEDEALLLGGEGALTEVGAEVVGPPEP 90
Query: 416 TTLSAPLKPSEFGNRAPAAMAMLCYVIHE 330
L+A L+P + P A+A+ +V+ +
Sbjct: 89 AALAAALQPGLPAHGVPVALAVAPHVVQQ 3
Score = 59.7 bits (124), Expect = 5e-008
Identities = 35/81 (43%), Positives = 36/81 (44%)
Frame = -3 / -2
Query: 595 LMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSL 416
L F FL SLSVLPGSCA + HL P S PL R G R H S
Sbjct: 268 LKRVFQ*FLTSLSVLPGSCAEMRAHLLPMRPWRRRMRRSSSGEKGPLRRLGRRWLAHRSR 89
Query: 415 QLFPHL*SPASLGTELQQPWP 353
QL P SP S T Q P P
Sbjct: 88 QLLPQRCSPVSRRTAFQLPSP 26
Score = 45.5 bits (93), Expect = 0.001
Identities = 27/80 (33%), Positives = 27/80 (33%)
Frame = +1 / +1
Query: 355 AMAAGALFPNSLGFKGAERVVG*GG*TI*GQTSREGHSPXXXXXXXXXXXXXXXXXXXXX 534
A A G G A R G GG T TS SP
Sbjct: 28 ARATGTPCAGRPGCSAAARAAGSGGPTTSAPTSVRAPSPPRRSASSSASTASSATSGRAS 207
Query: 535 QRSCQGGLIMRSRIYGTRAS 594
Q SC GG RSR GTRAS
Sbjct: 208 QHSCPGGRTTRSRTTGTRAS 267
>gb|CA027463.1|CA027463 HZ59A03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59A03
5-PRIME, mRNA sequence
Length = 436
Score = 154 bits (331), Expect = 1e-036
Identities = 59/104 (56%), Positives = 77/104 (74%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
+RKG W+ EED L N++ +G G W+++ + AGL R GKSCRLRW+NYLRPD++RG
Sbjct: 67 VRKGPWTMEEDLVLANYVAANGEGAWNTLARAAGLNRTGKSCRLRWLNYLRPDVRRGNIT 246
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
+E LI++L A GNRWS+IA LPGRTDNEIKN W + I+KK
Sbjct: 247 PEEHLLILDLQARWGNRWSKIARHLPGRTDNEIKNFWRTKIQKK 378
Score = 71.2 bits (149), Expect = 2e-011
Identities = 38/110 (34%), Positives = 56/110 (50%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLL P +LDL++ P ++ +L P V +Q+ DE + + + V Q+V PP
Sbjct: 378 LLLYLGPPEVLDLVVGPAGEVPGDLGPAVAPPRLQVQDEQVLLRRDVAAPHVGAQVVQPP 199
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAA 273
QP L P++P G P A+A+ V+ E +LL GP L L AA
Sbjct: 198 QPAALPRPVQPGGAGEGVPRALAVGGDVVREDEVLLHGPGALPHRRLRAA 49
Score = 66.1 bits (138), Expect = 6e-010
Identities = 37/85 (43%), Positives = 40/85 (47%)
Frame = -3 / -3
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FI 428
L FF + +FLISLSV PG C AI D P AC S P SG R*F
Sbjct: 383 LRFFCILVLQKFLISLSVRPGRCLAILDQRLPHLACRSRMSRCSSGVMLPRRTSGRR*FS 204
Query: 427 HLSLQLFPHL*SPASLGTELQQPWP 353
H S QLFP SPA+ P P
Sbjct: 203 HRSRQLFPVRFSPAARARVFHAPSP 129
>gb|BF619532.3|BF619532 HVSMEc0003P10f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0003P10f, mRNA sequence
Length = 859
Score = 132 bits (282), Expect(3) = 2e-036
Identities = 51/89 (57%), Positives = 64/89 (71%)
Frame = +3 / +3
Query: 255 EMGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWIN 434
+MGR CC K L++G +PEED+ L+ HI HGH W ++PK AGL RCGKSCR+RWIN
Sbjct: 120 KMGRAPCC*KMGLKRGPCTPEEDKILVEHIHIHGHSNWRALPKQAGLLRCGKSCRIRWIN 299
Query: 435 YLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
YLRPD+KRG F+ EE II LH +L +
Sbjct: 300 YLRPDIKRGNFSNKEEQSIIRLHQLLSKQ 386
Score = 87.2 bits (184), Expect(2) = 5e-018
Identities = 41/86 (47%), Positives = 53/86 (61%)
Frame = -2 / -3
Query: 512 EDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIH 333
E VQ DD + ++GE +L+V PQ+V PP P L+AP KP G RAP A+A+ V
Sbjct: 377 EQLVQPDD*LLLLVGEVAALDVRPQVVDPPDPAALAAPQKPGLLGQRAPVAVAVDVDVFD 198
Query: 332 EFLILLRGPEPLSQLLLVAARMPPHL 255
+ L+LLR P Q L+AAR PPHL
Sbjct: 197 QDLVLLRRTGPPLQAHLLAARRPPHL 120
Score = 45.1 bits (92), Expect = 0.001
Identities = 26/66 (39%), Positives = 33/66 (50%)
Frame = -1 / -2
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNA 265
A+ S ST + +S RT EA+ W +S G C S PP RAP S + SS
Sbjct: 309 AAGS*STGSGSSCRTAEARLAWAARASCCGRGCGCVRPGSCPPPAYRAPSSGPSSSSTAP 130
Query: 264 SPSQRN 247
SPS R+
Sbjct: 129 SPSSRS 112
Score = 42.3 bits (86), Expect = 0.009
Identities = 20/36 (55%), Positives = 21/36 (58%)
Frame = -3 / -1
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWP 353
P L SG R* IH QL PH SPA LG+ Q WP
Sbjct: 325 PRLMSGRR*LIHRIRQLLPHRRSPACLGSARQLLWP 218
Score = 41.8 bits (85), Expect = 0.013
Identities = 25/62 (40%), Positives = 33/62 (53%)
Frame = +2 / +2
Query: 251 R*DGEAFLLLQAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVD 430
R DGE +LL+ E+GAL GG + +H P L +Q AS VR+EL VD
Sbjct: 116 REDGEGAVLLEDGPEEGALYAGGGQDPGRTHPHPRPQQLARAAQASRASAVRQELPDPVD 295
Query: 431 KL 436
+L
Sbjct: 296 QL 301
Score = 35.0 bits (70), Expect(3) = 2e-036
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 546 PGRTDNEIKNLWNSCIKKK 602
PGRTD EIKN+W + +KK+
Sbjct: 413 PGRTDIEIKNVWRTHLKKR 469
Score = 24.9 bits (48), Expect(2) = 5e-018
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 607 LSFFLMHEFHRFLISLSVLPG 545
L+ FL FLIS+SVLPG
Sbjct: 474 LNRFLRWVRQTFLISMSVLPG 412
Score = 24.9 bits (48), Expect(3) = 2e-036
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 516 NRWSQIAAQLPG 551
NRWS IAA+L G
Sbjct: 382 NRWSSIAARLSG 417
>gb|CA003603.1|CA003603 HS14P22r HS Hordeum vulgare subsp. vulgare cDNA clone HS14P22
5-PRIME, mRNA sequence
Length = 405
Score = 152 bits (327), Expect = 5e-036
Identities = 55/80 (68%), Positives = 68/80 (85%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKGLWSPEED+KL ++I +HGHGCWS++P AGLQR GKSCRLRWINYLRP LK G F+
Sbjct: 166 RKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSA 345
Query: 474 DEEDLIIELHAVLGNRWSQI 533
+EE+ ++ LHA LGN+WS+I
Sbjct: 346 EEEETVMSLHAALGNKWSRI 405
Score = 73.5 bits (154), Expect = 4e-012
Identities = 35/77 (45%), Positives = 46/77 (59%)
Frame = -2 / -1
Query: 527 RPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAML 348
RP V E V+ + + E L+ PQ+V PPQP L+ PL+P G RAPAA+A+
Sbjct: 399 RPLVAEGGVEAHHRLLLLRREHAVLQPRPQVVDPPQPAALAVPLEPGFSGKRAPAAVAVP 220
Query: 347 CYVIHEFLILLRGPEPL 297
VI E L+LLR P+PL
Sbjct: 219 ENVIAELLVLLRRPQPL 169
Score = 65.2 bits (136), Expect = 1e-009
Identities = 30/59 (50%), Positives = 31/59 (52%)
Frame = -3 / -2
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
DHL PR A S N P G R* IH SLQL P SPA G+ LQQPWPC
Sbjct: 398 DHLLPRAAWRLITVSSSSAENMPCFSPGRR*LIHRSLQLLPFRWSPALAGSALQQPWPC 222
Score = 40.5 bits (82), Expect = 0.033
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2 / +3
Query: 281 QAEAEKGALVP*GG*ETHESHNKAWPWLLELCSQTRWASKVRKEL*AEVDKL 436
QAE +GA+V GG E H+ A P LLE S+ A R+EL A VD+L
Sbjct: 153 QAELPEGAVVAGGGPEAPRLHSPARPRLLERASR*SRAPAERQELQAAVDQL 308
Score = 40.5 bits (82), Expect = 0.033
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = -1 / -3
Query: 444 ASDSLSTSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSK 271
A+ S ST+A +S R+ A+ E SSS G A C+ S PP T AP +SA +S+
Sbjct: 316 AAGS*STAACSSCRSAGARL*REARSSSRGRAGECNRGASGPPPATTAPSGSSAWASR 143
>gb|BQ460434.1|BQ460434 HA09K10r HA Hordeum vulgare subsp. vulgare cDNA clone HA09K10
5-PRIME, mRNA sequence
Length = 613
Score = 150 bits (323), Expect = 2e-035
Identities = 58/111 (52%), Positives = 79/111 (71%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
+++ RKG W+ +ED +L+ + G W + K++GL R GKSCRLRW+NYL P LKRG
Sbjct: 137 REETRKGPWTEQEDMQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRG 316
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
EE LI+ELHA GNRWS+IA +LPGRTDNEIKN W + ++KK +++
Sbjct: 317 RMTPHEERLILELHARWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQER 469
Score = 80.8 bits (170), Expect = 2e-014
Identities = 42/117 (35%), Positives = 58/117 (49%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDLI+ PWQL C PPV S+ L DE FF+ +LE ++V PP+ T LS
Sbjct: 436 PVVLDLIVGTPWQLPCYPGPPVSPPSM*LKDEAFFMRSHASTLEARVEVVDPPEATALSC 257
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLGA 231
++ FGN P A ++ +LL P P + L R+ L A+ L A
Sbjct: 256 AVEA*YFGNEIPTAFTEQTDSAYQLHVLLLCPWPFACLFSHLYRLGARLLALLPLSA 86
Score = 66.1 bits (138), Expect = 6e-010
Identities = 37/84 (44%), Positives = 42/84 (50%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ FLISLSV PGS AI DHLFP AC P LR G R* H
Sbjct: 459 AFFLICVLQ*FLISLSVRPGSFRAILDHLFPHRACSSRMRRSS*GVMRPRLRPGWR*LTH 280
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
QLFP P +L + Q+ P
Sbjct: 279 RRRQLFPVRLRPDTLAMKSQRRSP 208
>gb|BM371860.2|BM371860 EBma08_SQ004_D12_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_D12 5', mRNA sequence
Length = 594
Score = 150 bits (323), Expect = 2e-035
Identities = 58/111 (52%), Positives = 79/111 (71%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
+++ RKG W+ +ED +L+ + G W + K++GL R GKSCRLRW+NYL P LKRG
Sbjct: 181 REETRKGPWTEQEDMQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRG 360
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
EE LI+ELHA GNRWS+IA +LPGRTDNEIKN W + ++KK +++
Sbjct: 361 RMTPHEERLILELHARWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQER 513
Score = 77.6 bits (163), Expect = 2e-013
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDLI+ PWQL C PPV S+ L DE FF+ +LE ++V PP+ T LS
Sbjct: 480 PVVLDLIVGTPWQLPCYPGPPVSPPSM*LKDEAFFMRSHASTLEARVEVVDPPEATALSC 301
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
++ FGN P A ++ +LL P P + L
Sbjct: 300 AVEA*YFGNEIPTAFTEQTDSAYQLHVLLLCPWPFACL 187
Score = 66.1 bits (138), Expect = 6e-010
Identities = 37/84 (44%), Positives = 42/84 (50%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ FLISLSV PGS AI DHLFP AC P LR G R* H
Sbjct: 503 AFFLICVLQ*FLISLSVRPGSFRAILDHLFPHRACSSRMRRSS*GVMRPRLRPGWR*LTH 324
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
QLFP P +L + Q+ P
Sbjct: 323 RRRQLFPVRLRPDTLAMKSQRRSP 252
>gb|BQ466900.1|BQ466900 HS01O24T HS Hordeum vulgare subsp. vulgare cDNA clone HS01O24
5-PRIME, mRNA sequence
Length = 304
Score = 150 bits (322), Expect = 3e-035
Identities = 56/99 (56%), Positives = 71/99 (71%)
Frame = +3 / +2
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
+++KG W+PEED L++++ +HG G W +V GL RC KSCRLRW NYLRP +KRG F
Sbjct: 8 RVKKGPWTPEEDLVLVSYVQEHGPGNWRAVTTRTGLMRCSKSCRLRWTNYLRPGIKRGNF 187
Query: 468 AQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWN 584
EE LI+ L A+ GNRW+ IA LP RTDN+IKN WN
Sbjct: 188 TDQEEKLIVHLQALFGNRWAAIAFYLPERTDNDIKNYWN 304
Score = 73.9 bits (155), Expect = 3e-012
Identities = 34/96 (35%), Positives = 57/96 (59%)
Frame = -2 / -1
Query: 584 VP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
VP +LD+++ ++ + PPV E +++DDE+ ++GE +L+ Q+V PP+P L+
Sbjct: 304 VPVVLDVVVGALGKVEGDRGPPVAEQRLEVDDELLLLVGEVTALDPRAQVVGPPEPAALT 125
Query: 404 APLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPL 297
AP + G+ AP + A+L V E +LLR P L
Sbjct: 124 APHQAGAGGDGAPVSGAVLLNVGDEHEVLLRRPGAL 17
>gb|BU975173.1|BU975173 HB30F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB30F02
5-PRIME, mRNA sequence
Length = 425
Score = 149 bits (319), Expect = 7e-035
Identities = 58/107 (54%), Positives = 76/107 (71%)
Frame = +3 / +2
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKG W+ +ED +L+ + G W + K++GL R GKSCRLRW+NYL P LKRG
Sbjct: 11 RKGPWTEQEDMQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMTP 190
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
EE LI+ELHA GNRWS+IA +LPGRTDNEIKN W + ++KK +++
Sbjct: 191 HEERLILELHARWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKAQER 331
Score = 77.1 bits (162), Expect = 3e-013
Identities = 36/96 (37%), Positives = 50/96 (52%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDLI+ PWQL C PPV S+ L DE FF+ +LE ++V PP+ T LS
Sbjct: 298 PVVLDLIVGTPWQLPCYPGPPVSPPSM*LKDEAFFMRSHASTLEARVEVVDPPEATALSC 119
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLS 294
++ FGN P A ++ +LL P P +
Sbjct: 118 AVEA*YFGNEIPTAFTEQTDSAYQLHVLLLCPWPFA 11
Score = 66.1 bits (138), Expect = 6e-010
Identities = 37/84 (44%), Positives = 42/84 (50%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFL+ FLISLSV PGS AI DHLFP AC P LR G R* H
Sbjct: 321 AFFLICVLQ*FLISLSVRPGSFRAILDHLFPHRACSSRMRRSS*GVMRPRLRPGWR*LTH 142
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
QLFP P +L + Q+ P
Sbjct: 141 RRRQLFPVRLRPDTLAMKSQRRSP 70
>gb|BF626054.2|BF626054 HVSMEa0015H17f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015H17f, mRNA sequence
Length = 710
Score = 147 bits (315), Expect = 2e-034
Identities = 57/102 (55%), Positives = 71/102 (69%)
Frame = +3 / +3
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQ 473
RKG W+ +ED KL + G W + K++GL R GKSCRLRW+NYL PDLKRG
Sbjct: 57 RKGPWTEQEDMKLAWFVRLFGERRWDFLAKVSGLNRTGKSCRLRWVNYLHPDLKRGRMTP 236
Query: 474 DEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
DEE L+++LHA GNRWS+IA +PGRTDNEIKN W + +K
Sbjct: 237 DEERLVVDLHARWGNRWSRIAKAMPGRTDNEIKNYWRTHTRK 362
Score = 51.5 bits (106), Expect = 2e-005
Identities = 30/74 (40%), Positives = 35/74 (47%)
Frame = -3 / -2
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PG A+ DH P+ A S P RSG R* H QLFP
Sbjct: 337 FLISLSVRPGMALAMRDHRLPQRAWRSTTRRSSSGVIRPRFRSGWR*LTHRRRQLFPVRL 158
Query: 394 SPASLGTELQQPWP 353
P +L + Q+ P
Sbjct: 157 RPDTLAKKSQRRSP 116
Score = 45.1 bits (92), Expect = 0.001
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = -2 / -1
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLC 345
P V V++DDE V +L+V ++V PP+ L P++ PAA+A
Sbjct: 287 PSVAPAGVEVDDEALLVGRHPAALQVGVEVVDPPEAAALPGPVET*HLSQEIPAALAEEP 108
Query: 344 YVIHEFLILLRGPEPLSQ 291
+ + +LL P PL++
Sbjct: 107 HEPRQLHVLLLRPWPLAE 54
>gb|BU975705.1|BU975705 HB32A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB32A20
5-PRIME, mRNA sequence
Length = 574
Score = 147 bits (315), Expect = 2e-034
Identities = 57/111 (51%), Positives = 78/111 (70%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
+++ RKG W+ +ED +L+ + G W + K++GL R GKSCRLRW+NYL P LKRG
Sbjct: 191 REETRKGPWTEQEDMQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRG 370
Query: 462 AFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
EE LI+ELHA GNRWS+IA +LPGRTDNEIKN W + ++K +++
Sbjct: 371 RMTPHEERLILELHARWGNRWSRIARKLPGRTDNEIKNYWRTHMRKIAQER 523
Score = 77.6 bits (163), Expect = 2e-013
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = -2 / -1
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDLI+ PWQL C PPV S+ L DE FF+ +LE ++V PP+ T LS
Sbjct: 490 PVVLDLIVGTPWQLPCYPGPPVSPPSM*LKDEAFFMRSHASTLEARVEVVDPPEATALSC 311
Query: 401 PLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQL 288
++ FGN P A ++ +LL P P + L
Sbjct: 310 AVEA*YFGNEIPTAFTEQTDSAYQLHVLLLCPWPFACL 197
Score = 63.4 bits (132), Expect = 4e-009
Identities = 36/84 (42%), Positives = 41/84 (48%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+ FL+ FLISLSV PGS AI DHLFP AC P LR G R* H
Sbjct: 513 AIFLICVLQ*FLISLSVRPGSFRAILDHLFPHRACSSRMRRSS*GVMRPRLRPGWR*LTH 334
Query: 424 LSLQLFPHL*SPASLGTELQQPWP 353
QLFP P +L + Q+ P
Sbjct: 333 RRRQLFPVRLRPDTLAMKSQRRSP 262
>gb|AV920069.1|AV920069 AV920069 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9c13 3', mRNA sequence
Length = 710
Score = 102 bits (218), Expect(2) = 2e-034
Identities = 39/57 (68%), Positives = 50/57 (87%)
Frame = +3 / -2
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLR 608
LRPD+KRG F +EE II+LHA+LGNRWS IAA+LPGRTDNEIKN+W++ +KK+L+
Sbjct: 604 LRPDIKRGNFTSEEEGAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLQ 434
Score = 64.3 bits (134), Expect(2) = 2e-034
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3 / -1
Query: 348 KHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRP 446
+HGH W ++P AG RCGKSCRLRWINYL P
Sbjct: 695 QHGHSNWRALPNQAGXLRCGKSCRLRWINYLAP 597
Score = 46.4 bits (95), Expect = 5e-004
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = -2 / +2
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQ 438
LL+ VP +LDL++ PP + N P V E V+LDD + GE +L+V Q
Sbjct: 443 LLEVCVPDVLDLVVRPPRKPGGNGGPSVAEHGVELDDGALLLAGEVAALDVGAQ 604
Score = 44.6 bits (91), Expect = 0.002
Identities = 26/54 (48%), Positives = 27/54 (50%)
Frame = -3 / +3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSG 443
S FL FLISLSVLPGS AA+ DHL P A S P L SG
Sbjct: 438 SRFLRCVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMAPSSSLVKLPRLMSG 599
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds
Length = 6228
Score = 128 bits (275), Expect(2) = 3e-034
Identities = 47/85 (55%), Positives = 67/85 (78%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
L+KG W+ ED L++++ KHG G W++V K GL RCGKSCRLRW N+LRP+LK+GAF
Sbjct: 2057 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 2236
Query: 471 QDEEDLIIELHAVLGNRWSQIAAQL 545
+EE LII+LH+ +GN+W+++AA +
Sbjct: 2237 PEEERLIIQLHSKMGNKWARMAAHV 2311
Score = 73.5 bits (154), Expect(2) = 7e-013
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = -2 / -3
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLC 345
P V V+LDDE + GE P LEV P++V PP+ L+AP +P +R P +A+L
Sbjct: 2290 PLVAHLGVELDDEPLLLGGEGPLLEVGPEVVRPPEAAALAAPEQPGVLLHRVPVPLAVLL 2111
Query: 344 YVIHEFLILLRGPEPLSQ 291
+V+H+ +L R P PL Q
Sbjct: 2110 HVVHQDGVLRRRPGPLLQ 2057
Score = 50.6 bits (104), Expect = 3e-005
Identities = 28/64 (43%), Positives = 28/64 (43%)
Frame = -3 / -1
Query: 538 AAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQP 359
AAI HL P S AP LR GLR F H QL PH SP T Q P
Sbjct: 2304 AAIRAHLLPILEWSWMMSLSSSGVKAPFLRLGLRWFAHRRRQLLPHRNSPVFFCTAFQFP 2125
Query: 358 WPCF 347
PCF
Sbjct: 2124 SPCF 2113
Score = 44.6 bits (91), Expect(2) = 3e-034
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +3 / +1
Query: 534 AAQLPGRTDNEIKNLWNSCIKK 599
++QLPGRTDNEIKN WN+ IK+
Sbjct: 3217 SSQLPGRTDNEIKNYWNTRIKR 3282
Score = 28.1 bits (55), Expect(2) = 7e-013
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLR 537
L + VP IL +IS PWQLR
Sbjct: 3279 LYSSVPVILYFVISTPWQLR 3220
>gb|AL507948.1|AL507948 AL507948 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07F08V 5',
mRNA sequence
Length = 631
Score = 144 bits (309), Expect = 2e-033
Identities = 54/91 (59%), Positives = 70/91 (76%)
Frame = +3 / +2
Query: 351 HGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQ 530
HG G W+++ + AGL+R GKSCRLRW+NYLRPD+KRG F DE+ LI++LH+ GNRWS+
Sbjct: 26 HGEGRWNALARAAGLRRTGKSCRLRWLNYLRPDVKRGNFTADEQLLILDLHSRWGNRWSK 205
Query: 531 IAAQLPGRTDNEIKNLWNSCIKKKLRQKGID 623
IA LPGRTDNEIKN W + ++K +Q D
Sbjct: 206 IAQHLPGRTDNEIKNYWRTRVQKHAKQLNCD 298
Score = 66.1 bits (138), Expect = 6e-010
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = -2 / -1
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
+LL P +LDL++ P ++ +LRPPV V+++DE V GE +L V ++V PP
Sbjct: 277 VLLHPGPPVVLDLVVRPTREVLRDLRPPVTPARVEVEDEELLVGGEVAALHVGAEVVQPP 98
Query: 422 QPTTLSAPLKPSEFGNRAPAAMAML 348
QP L + R PAA+A++
Sbjct: 97 QPAALPRAPQAGGPRQRVPAALAVI 23
Score = 62.9 bits (131), Expect = 6e-009
Identities = 35/86 (40%), Positives = 40/86 (46%)
Frame = -3 / -2
Query: 610 CLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*F 431
C + F FLISLSV PG C AI DH P+ S P SG R*F
Sbjct: 285 CFACFCTLVLQ*FLISLSVRPGRCCAIFDHRLPQREWRSRMRSCSSAVKLPRFTSGRR*F 106
Query: 430 IHLSLQLFPHL*SPASLGTELQQPWP 353
H S QLFP PA+ + Q+P P
Sbjct: 105 SHRSRQLFPVRLRPAARASAFQRPSP 28
>gb|BI779364.2|BI779364 EBro01_SQ003_M18_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_M18 5', mRNA sequence
Length = 604
Score = 122 bits (260), Expect(2) = 7e-030
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +3 / +1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
GL R GKSCRLRW+NYL PDLKRG DEE L+++LHA GNRWS+IA +PGRTDNEI
Sbjct: 388 GLNRTGKSCRLRWVNYLHPDLKRGRMTPDEERLVVDLHARWGNRWSRIAKGMPGRTDNEI 567
Query: 570 KNLWNSCIKK 599
KN W + +K
Sbjct: 568 KNYWRTHTRK 597
Score = 48.3 bits (99), Expect(2) = 8e-006
Identities = 28/62 (45%), Positives = 30/62 (48%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PG A+ DH P+ A S P RSG R* H QLFP
Sbjct: 572 FLISLSVRPGMPLAMRDHRLPQRAWRSTTRRSSSGVIRPRFRSGWR*LTHRRRQLFPVRL 393
Query: 394 SP 389
SP
Sbjct: 392 SP 387
Score = 41.4 bits (84), Expect = 0.018
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -2 / -2
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDL++ + P V V++DDE V +L+V ++V PP+ L
Sbjct: 579 PVVLDLVVGAARHALGDA*PSVAPAGVEVDDEALLVGRHPAALQVGVEVVDPPEAAALPG 400
Query: 401 PLKPSEFG 378
P++P G
Sbjct: 399 PVEPCRQG 376
Score = 33.6 bits (67), Expect(2) = 7e-030
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
RKG W+ EED KL + G W + K +GLQ G
Sbjct: 133 RKGPWTGEEDMKLAWFVRVFGERRWDFLAKGSGLQGGG 246
Score = 25.8 bits (50), Expect(2) = 8e-006
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2 / -2
Query: 404 APLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
APL+P PAA+A + + +LL P PL++
Sbjct: 243 APLQP*PLSQEIPAALAEDPHEPRQLHVLLPRPWPLAE 130
>gb|BQ765682.1|BQ765682 EBro03_SQ007_I24_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ007_I24 5', mRNA sequence
Length = 623
Score = 127 bits (271), Expect = 3e-028
Identities = 53/114 (46%), Positives = 71/114 (62%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P LKRG DEE LI+ LHA G+RWS+IA +LPGRTDNE
Sbjct: 104 AGLRRTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGSRWSRIARKLPGRTDNE 283
Query: 567 IKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTERTSGSSDINPSST 728
IKN W + ++KK +++ + + + S T+ S P++T
Sbjct: 284 IKNYWRTHMRKKAQEEKMMAKNKASSSSPSSSDSTAATSLTTTTTCSASTPTAT 445
Score = 45.5 bits (93), Expect = 0.001
Identities = 31/73 (42%), Positives = 33/73 (45%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFLM FLISLSV PGS AI D P +A S P LR G R*
Sbjct: 321 AFFLMCVLQ*FLISLSVRPGSFRAILDQRDPHSAWRVRMRRSSSAVMRPRLRPGCR*LTQ 142
Query: 424 LSLQLFPHL*SPA 386
QL P PA
Sbjct: 141 RRRQLLPVRRRPA 103
Score = 44.1 bits (90), Expect = 0.003
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = -2 / -2
Query: 629 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLE 450
+G + L LL R P +LDL++ +L + P P V+ +DE V G+ P+LE
Sbjct: 346 LGHHLLLLGLLPHVRPPVVLDLVVGAAGELPRDPGPAGPPLGVEGEDEALLVGGDAPALE 167
Query: 449 VWPQIVYPPQPTTLS 405
Q+V P + L+
Sbjct: 166 ARVQVVDPAEAAALA 122
>gb|CK123590.1|CK123590 BES1824104i24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I244 5-PRIME, mRNA sequence
Length = 284
Score = 127 bits (271), Expect = 3e-028
Identities = 45/77 (58%), Positives = 59/77 (76%)
Frame = +3 / +2
Query: 273 CCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDL 452
CC K+ L +G W+ ED+ L+++I +HG G W S+PK AGL RCGKSCRLRW+NYLRP +
Sbjct: 41 CCSKEGLNRGAWTAMEDDILVSYINEHGEGKWGSLPKRAGLNRCGKSCRLRWLNYLRPGI 220
Query: 453 KRGAFAQDEEDLIIELH 503
KRG + DEE+LI+ LH
Sbjct: 221 KRGNISXDEEELIVRLH 271
Score = 71.6 bits (150), Expect = 1e-011
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = -2 / -2
Query: 503 VQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFL 324
V+ DDE+ V+G+ SL+ P++V PPQP L AP++PS F AP A+AML V + +
Sbjct: 271 VEPDDELLLVVGDVASLDPRPEVVEPPQPAALPAPIQPSSFREAAPLALAMLVDVGDQDV 92
Query: 323 ILLRGPEPLSQLLLVAA 273
+L P Q LL AA
Sbjct: 91 VLHCRPRSSVQALLGAA 41
Score = 46.9 bits (96), Expect = 4e-004
Identities = 23/40 (57%), Positives = 24/40 (60%)
Frame = -3 / -3
Query: 460 PLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCFVM 341
PLL G R* H S QLFPHL SPA LG P PC +M
Sbjct: 228 PLLIPGRR*LSHRSRQLFPHLFSPARLGRLPHLPSPCSLM 109
Score = 40.9 bits (83), Expect = 0.024
Identities = 29/66 (43%), Positives = 33/66 (50%)
Frame = +1 / +3
Query: 274 AATSRS*ERGSGPLRRMRNS*IT*QSMAMAAGALFPNSLGFKGAERVVG*GG*TI*GQTS 453
AA R+* G R + T SMA A+GA N LG GA R G GG T G+ S
Sbjct: 42 AAPRRA*TEERGRQWRTTSWSPTSTSMARASGAASLNELG*IGAGRAAGCGGSTTSGRGS 221
Query: 454 REGHSP 471
RE SP
Sbjct: 222 REATSP 239
>gb|AV933832.1|AV933832 AV933832 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9l05 5', mRNA sequence
Length = 665
Score = 124 bits (266), Expect = 1e-027
Identities = 48/76 (63%), Positives = 60/76 (78%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P LKRG DEE LI+ LHA G+RWS+IA +LPGRTDNE
Sbjct: 425 AGLRRTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGSRWSRIARKLPGRTDNE 604
Query: 567 IKNLWNSCIKKKLRQK 614
IKN W + ++KK +++
Sbjct: 605 IKNYWRTHMRKKAQEE 652
Score = 45.5 bits (93), Expect = 0.001
Identities = 31/73 (42%), Positives = 33/73 (45%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFLM FLISLSV PGS AI D P +A S P LR G R*
Sbjct: 642 AFFLMCVLQ*FLISLSVRPGSFRAILDQRDPHSAWRVRMRRSSSAVMRPRLRPGCR*LTQ 463
Query: 424 LSLQLFPHL*SPA 386
QL P PA
Sbjct: 462 RRRQLLPVRRRPA 424
Score = 43.7 bits (89), Expect = 0.004
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = -2 / -2
Query: 626 GINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEV 447
G + L LL R P +LDL++ +L + P P V+ +DE V G+ P+LE
Sbjct: 664 GHHLLLLGLLPHVRPPVVLDLVVGAAGELPRDPGPAGPPLGVEGEDEALLVGGDAPALEA 485
Query: 446 WPQIVYPPQPTTLS 405
Q+V P + L+
Sbjct: 484 RVQVVDPAEAAALA 443
>gb|BI954784.1|BI954784 HVSMEm0019M04f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0019M04f, mRNA sequence
Length = 672
Score = 124 bits (265), Expect = 2e-027
Identities = 48/76 (63%), Positives = 59/76 (77%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P LKRG DEE LI+ LHA G+RWS+IA +LPGRTDNE
Sbjct: 242 AGLRRTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGSRWSRIARKLPGRTDNE 421
Query: 567 IKNLWNSCIKKKLRQK 614
IKN W + ++KK ++
Sbjct: 422 IKNYWRTHMRKKAHEE 469
Score = 46.0 bits (94), Expect = 7e-004
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = -2 / -3
Query: 629 VGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLE 450
+G + L L R P +LDL++ P +L + P P V+ +DE V G+ P+LE
Sbjct: 484 LGHHFLLVGFLPHVRPPVVLDLVVGAPGELPRDPGPAGPPLGVEGEDEALLVGGDAPALE 305
Query: 449 VWPQIVYPPQPTTLS 405
Q+V P + L+
Sbjct: 304 ARVQVVDPAEAAALA 260
Score = 45.5 bits (93), Expect = 0.001
Identities = 31/73 (42%), Positives = 33/73 (45%)
Frame = -3 / -1
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
+FFLM FLISLSV PGS AI D P +A S P LR G R*
Sbjct: 459 AFFLMCVLQ*FLISLSVRPGSFRAILDQRDPHSAWRVRMRRSSSAVMRPRLRPGCR*LTQ 280
Query: 424 LSLQLFPHL*SPA 386
QL P PA
Sbjct: 279 RRRQLLPVRRRPA 241
>gb|BM443593.2|BM443593 EBro02_SQ005_M21_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_M21 5', mRNA sequence
Length = 378
Score = 123 bits (264), Expect = 3e-027
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = +3 / +2
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 461
++ LR+G W+ EED L N+I +G G W+++ + AGL+R GKSCRLRW+NYLRPDL+RG
Sbjct: 128 EETLRRGPWTVEEDVLLANYIAANGEGRWNALARRAGLKRTGKSCRLRWLNYLRPDLRRG 307
Query: 462 AFAQDEEDLIIELHAVLGNRWSQ 530
A +E+ LI+ELHA GNRWS+
Sbjct: 308 GMAAEEQLLILELHARRGNRWSK 376
Score = 57.0 bits (118), Expect = 4e-007
Identities = 30/87 (34%), Positives = 44/87 (50%)
Frame = -2 / -3
Query: 530 LRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAM 351
L PPV VQL+DE + + +V PQ+V P Q L+ L+P R P A+A+
Sbjct: 376 LGPPVAPPRVQLEDEQLLLRRHAAAPQVRPQVVEPAQAAALAGALQPRAPRQRVPPALAV 197
Query: 350 LCYVIHEFLILLRGPEPLSQLLLVAAR 270
V+ + +LL P P + LL+ R
Sbjct: 196 RRDVVRQEHVLLHRPRPPPKRLLLPHR 116
Score = 38.2 bits (77), Expect = 0.16
Identities = 23/62 (37%), Positives = 25/62 (40%)
Frame = -3 / -1
Query: 526 DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCF 347
DH PR AC S A P RSG R* QL P SPA + +P P
Sbjct: 372 DHRLPRRACSSRMSSCSSAAMPPRRRSGRR*LSQRRRQLLPVRFSPARRASAFHRPSPFA 193
Query: 346 VM 341
M
Sbjct: 192 AM 187
>gb|AL507750.1|AL507750 AL507750 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06L23V 5',
mRNA sequence
Length = 541
Score = 103 bits (220), Expect(2) = 8e-027
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++R F +E+ I+ HA LGNRW+ IA LPGRTDN +KN
Sbjct: 230 RSGKSCRLRWCNQLSPQVERRPFTAEEDAAILRAHARLGNRWAAIARLLPGRTDNAVKNH 409
Query: 579 WNSCIKKKL 605
WNS +K+KL
Sbjct: 410 WNSSLKRKL 436
Score = 38.2 bits (77), Expect(2) = 8e-027
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSV 377
KG WSPEEDE L + +HG W+++
Sbjct: 131 KGPWSPEEDEALRRLVERHGARNWTAI 211
Score = 33.1 bits (66), Expect = 5.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
S L EF FL +LSV PGS A+ PR AC
Sbjct: 435 SLRLREEFQWFLTALSVRPGSRRAMAAQRLPRRAC 331
>gb|BQ756020.1|BQ756020 EBem05_SQ001_E11_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ001_E11 5', mRNA sequence
Length = 331
Score = 103 bits (220), Expect(2) = 8e-027
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L P ++R F +E+ I+ HA LGNRW+ IA LPGRTDN +KN
Sbjct: 119 RSGKSCRLRWCNQLSPQVERRPFTAEEDAAILRAHARLGNRWAAIARLLPGRTDNAVKNH 298
Query: 579 WNSCIKKKL 605
WNS +K+KL
Sbjct: 299 WNSSLKRKL 325
Score = 38.2 bits (77), Expect(2) = 8e-027
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSV 377
KG WSPEEDE L + +HG W+++
Sbjct: 20 KGPWSPEEDEALRRLVERHGARNWTAI 100
Score = 33.1 bits (66), Expect = 5.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTAC 500
S L EF FL +LSV PGS A+ PR AC
Sbjct: 324 SLRLREEFQWFLTALSVRPGSRRAMAAQRLPRRAC 220
>gb|BG369102.2|BG369102 HVSMEi0021L15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021L15f, mRNA sequence
Length = 877
Score = 120 bits (256), Expect = 3e-026
Identities = 48/75 (64%), Positives = 55/75 (73%)
Frame = +3 / +3
Query: 363 CWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQ 542
C++ AGL R GKSCRLRW+NYL P LKRG EE LI+ELHA GNRWS+IA +
Sbjct: 405 CFNLCNLHAGLNRTGKSCRLRWVNYLHPGLKRGRMTPHEERLILELHARWGNRWSRIARK 584
Query: 543 LPGRTDNEIKNLWNS 587
LPGRTDNEIKN W +
Sbjct: 585 LPGRTDNEIKNYWRT 629
Score = 63.8 bits (133), Expect = 3e-009
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = -2 / -3
Query: 581 P*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSA 402
P +LDLI+ PWQL C PPV S+ L DE FF+ +LE ++V PP+ T LS
Sbjct: 623 PVVLDLIVGTPWQLPCYPGPPVSPPSM*LKDEAFFMRSHASTLEARVEVVDPPEATALSC 444
Query: 401 PLK 393
++
Sbjct: 443 AVE 435
Score = 59.7 bits (124), Expect = 5e-008
Identities = 32/63 (50%), Positives = 32/63 (50%)
Frame = -3 / -1
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PGS AI DHLFP AC P LR G R* H QLFP
Sbjct: 616 FLISLSVRPGSFRAILDHLFPHRACSSRMRRSS*GVMRPRLRPGWR*LTHRRRQLFPVRL 437
Query: 394 SPA 386
PA
Sbjct: 436 RPA 428
Score = 34.5 bits (69), Expect(2) = 0.48
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3 / +1
Query: 282 KQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQ 398
+++ RKG W+ +ED +L+ + G W + K++GL+
Sbjct: 199 REETRKGPWTEQEDMQLVCTVRLFGERRWDFIAKVSGLR 315
Score = 23.5 bits (45), Expect(2) = 0.48
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1 / +1
Query: 541 SCQGGLIMRSRIYGTRASRRS*GRKALIPTPTS 639
SCQG MRSR G S RK + +S
Sbjct: 583 SCQGVPTMRSRTTGEHYEEESQERKRNVSPSSS 681
>gb|AV932650.1|AV932650 AV932650 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal1i09 5', mRNA sequence
Length = 619
Score = 118 bits (253), Expect = 9e-026
Identities = 46/67 (68%), Positives = 53/67 (79%)
Frame = +3 / +1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW+NYL P LKRG DEE LI+ LHA G+RWS+IA +LPGRTDNE
Sbjct: 409 AGLRRTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGSRWSRIARKLPGRTDNE 588
Query: 567 IKNLWNS 587
IKN W +
Sbjct: 589 IKNYWRT 609
Score = 40.9 bits (83), Expect = 0.024
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -2 / -2
Query: 587 RVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTL 408
R P +LDL++ +L + P P V+ +DE V G+ P+LE Q+V P + L
Sbjct: 609 RPPVVLDLVVGAAGELPRDPGPAGPPLGVEGEDEALLVGGDAPALEARVQVVDPAEAAAL 430
Query: 407 S 405
+
Sbjct: 429 A 427
Score = 39.6 bits (80), Expect = 0.062
Identities = 27/63 (42%), Positives = 28/63 (44%)
Frame = -3 / -3
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV PGS AI D P +A S P LR G R* QL P
Sbjct: 596 FLISLSVRPGSFRAILDQRDPHSAWRVRMRRSSSAVMRPRLRPGCR*LTQRRRQLLPVRR 417
Query: 394 SPA 386
PA
Sbjct: 416 RPA 408
>gb|BF625715.2|BF625715 HVSMEa0013F16f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0013F16f, mRNA sequence
Length = 522
Score = 68.0 bits (142), Expect(5) = 7e-025
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = -2 / -3
Query: 1901 LPTHAFLPMAIYIYLISTRENKNSNMQKFSRVQKENINFQEKGKETLEHTFLCILLQLLM 1722
LPTHA P+ +Y++ +S + RVQK+ + K +ET E TFLC L+ LLM
Sbjct: 382 LPTHAVFPIPVYLFDKQRVNKNSSIQKLSCRVQKKTTILKRKERETPECTFLCNLMPLLM 203
Query: 1721 PGLSFP*YCQLFN*G 1677
LSFP +C +F+ G
Sbjct: 202 TELSFPWHCMIFSRG 158
Score = 50.6 bits (104), Expect(5) = 4e-017
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = +2 / +1
Query: 1676 FLS*RAGNIKERTALALEVAAGCIGKYVLESPFLSLEN*CFPSVHD 1813
FL *R+ + E+ L+ VA+ C KY+LESPFLS F SVHD
Sbjct: 157 FLG*RSCSATEKITLSSGVASNCTEKYILESPFLSSSKLLFSSVHD 294
Score = 49.6 bits (102), Expect(4) = 2e-013
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 1675 VPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFPFS*KLMFSFCTR 1812
+P+LK Q GKD+ IRS ++HRKV S VS F K++ FCTR
Sbjct: 156 LPRLKIMQCHGKDNSVIRSGIKLHRKVHSGVSLSFLFKIVVFFCTR 293
Score = 45.5 bits (93), Expect(6) = 2e-015
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -1 / -2
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLIL 1696
SCTE + F ERKGDSR YF + AT + R + S+ L
Sbjct: 293 SCTEENNNFEEERKGDSRMYFSVQFDATPDDRVIFSVAL 177
Score = 38.6 bits (78), Expect(5) = 7e-025
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K KNT+CN *F TCMAAVE G
Sbjct: 480 KRYKNTSCNI*FESTCMAAVEKFG 409
Score = 33.1 bits (66), Expect(5) = 4e-017
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +2
Query: 1918 SPKLSTAAMHVHAN*LLHVVF 1980
+P STAAMHV +N*+L +VF
Sbjct: 407 APNFSTAAMHVDSN*ILQLVF 469
Score = 30.9 bits (61), Expect(4) = 2e-013
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / +1
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ FN CHA +L IA CIF F
Sbjct: 409 PKLFNSCHARRFELNIATCIFISF 480
Score = 30.9 bits (61), Expect(3) = 0.009
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = -3 / -1
Query: 1816 SVVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEE 1676
+VVYRRK + K+ RL N+L A C+ * Q F A S EE
Sbjct: 297 AVVYRRKQQF*RGKKGRLQNVLFCAI*CHS**QSYLFRGTA*SLAEE 157
Score = 27.2 bits (53), Expect(5) = 7e-025
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 1566 LCSMWWNIMPRYSQK 1522
L +W NI+PRY+QK
Sbjct: 46 LLHVWQNIVPRYAQK 2
Score = 27.2 bits (53), Expect(6) = 2e-015
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3 / -2
Query: 1981 KIQHAIINLHGHAWQQLKVWGYLHV 1907
KIQ AI N + AWQ LK G L V
Sbjct: 470 KIQVAIFNSNLRAWQLLKSLGLLLV 396
Score = 26.7 bits (52), Expect(5) = 7e-025
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -1 / -1
Query: 1590 RVSASSDLLCSMW 1552
+VSAS+DLLCSM+
Sbjct: 72 QVSASADLLCSMY 34
Score = 26.3 bits (51), Expect(5) = 7e-025
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 1670 VEDDFCINLTYLCEQ 1626
VE D+CINL YL Q
Sbjct: 152 VEVDYCINLAYLSMQ 108
Score = 26.3 bits (51), Expect(5) = 4e-017
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 1554 TWNRADQKKQKLV 1592
TW+RADQ+K +LV
Sbjct: 36 TWSRADQQKLRLV 74
Score = 25.8 bits (50), Expect(6) = 2e-015
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 1906 ESYRHMHFCLWLSIFI 1859
+SYRHM F +LSI++
Sbjct: 387 DSYRHMQFFPFLSIYL 340
Score = 25.4 bits (49), Expect(6) = 2e-015
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3 / -3
Query: 1675 QLWRMISVST*RIYV 1631
+LWR+I+VST IY+
Sbjct: 157 RLWRLITVSTSHIYL 113
Score = 25.4 bits (49), Expect(5) = 4e-017
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 1817 TFAYLSFCSL 1846
TF YLSFCSL
Sbjct: 301 TFGYLSFCSL 330
Score = 24.9 bits (48), Expect(4) = 2e-013
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 1553 HMEQSRSEEAET 1588
+MEQSRS EAET
Sbjct: 35 YMEQSRSAEAET 70
Score = 24.4 bits (47), Expect(4) = 2e-013
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1 / +3
Query: 1789 LMFSFCTRLNFCIFEFLFSL 1848
++F +LNF I EFLF+L
Sbjct: 273 VVFFCTRQLNFWILEFLFTL 332
Score = 24.0 bits (46), Expect(5) = 4e-017
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 1866 IDSHRQKCMCR*LS 1907
ID + + CMCR*LS
Sbjct: 347 IDRNGKNCMCR*LS 388
Score = 23.5 bits (45), Expect(6) = 2e-015
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / -2
Query: 1580 LLLICSVPC 1554
LLLICS PC
Sbjct: 62 LLLICSAPC 36
Score = 22.6 bits (43), Expect(3) = 0.009
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 1671 CGG*FLYQLNVSM 1633
CGG* LYQ +S+
Sbjct: 153 CGG*LLYQPRISI 115
Score = 22.6 bits (43), Expect(3) = 0.009
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 1902 ATDTCIFAYGYLYL 1861
ATDTC F++ L++
Sbjct: 383 ATDTCSFSHSCLFI 342
Score = 22.1 bits (42), Expect(6) = 2e-015
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 1848 QREQKLKYAKVQ 1813
+ EQKLKY KV+
Sbjct: 332 ESEQKLKYPKVE 297
>gb|BG343954.1|BG343954 HVSMEg0007D14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007D14f, mRNA sequence
Length = 863
Score = 114 bits (244), Expect = 1e-024
Identities = 45/82 (54%), Positives = 61/82 (74%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFA 470
++KG W+PEED L+++I +HG G W SVP+ GL RC KSCRLR NYLRP +KRG A
Sbjct: 165 VKKGPWTPEEDIILVSYIQQHGPGNWRSVPENTGLMRCSKSCRLRGTNYLRPGVKRGNLA 344
Query: 471 QDEEDLIIELHAVLGNRWSQIA 536
Q EE ++I L A+LGNR ++++
Sbjct: 345 QHEEGMMIRLQALLGNRGARVS 410
Score = 65.7 bits (137), Expect(3) = 3e-011
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = -2 / -1
Query: 527 RPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAML 348
RPPV + +Q F VLG+ PSL+ ++V PPQPT L+AP +P + P ML
Sbjct: 401 RPPVAQQCLQAYHHPFLVLGQVPSLDPGSEVVGPPQPTALAAPHQPCVLRHGPPVPRPML 222
Query: 347 CYVIHEFLILLRGPEPL 297
V + +LLR P PL
Sbjct: 221 LDVGDKDDVLLRRPWPL 171
Score = 55.6 bits (115), Expect = 9e-007
Identities = 26/57 (45%), Positives = 29/57 (50%)
Frame = -3 / -2
Query: 520 LFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPC 350
L P AC WA PLL GLR* + SLQL HL +P GT+ Q P PC
Sbjct: 394 LLPSNACRRIIIPSSCWAKFPLLTPGLR*LVPRSLQLLLHLINPVFSGTDRQFPGPC 224
Score = 24.0 bits (46), Expect(3) = 3e-011
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2 / -3
Query: 1307 VSPCIFFLSNVCP 1269
+SP +FFLS +CP
Sbjct: 678 LSPFLFFLSCLCP 640
Score = 23.5 bits (45), Expect(3) = 3e-011
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -2 / -3
Query: 608 PQLLLDARVP*ILDLIISPPWQLRCNLRPP 519
P L R P +L PWQ +L PP
Sbjct: 483 PPFLPQWRSPEVLHAATCSPWQQPGSLSPP 394
>gb|CK124462.1|CK124462 BES1824109d16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D169 5-PRIME, mRNA sequence
Length = 809
Score = 101 bits (215), Expect(2) = 2e-024
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GK CR RW N+L PD+++ A+ +EE +I H GN+W++IA LPGRTDN IKN
Sbjct: 385 RIGKQCRERWHNHLNPDIRKDAWTAEEEQALINAHREYGNKWAEIAKVLPGRTDNSIKNH 564
Query: 579 WNSCIKKKL 605
WNS ++KKL
Sbjct: 565 WNSSLRKKL 591
Score = 49.6 bits (102), Expect = 6e-005
Identities = 29/72 (40%), Positives = 32/72 (44%)
Frame = -3 / -1
Query: 619 MPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGL 440
+P +FFL F F I LSVLPG AI HLFP + S A SG
Sbjct: 605 VP*TSNFFLKELFQ*FFIELSVLPGRTFAISAHLFPYSRWALISACSSSAVQASFRMSGF 426
Query: 439 R*FIHLSLQLFP 404
R* HLS P
Sbjct: 425 R*LCHLSRHCLP 390
Score = 35.4 bits (71), Expect(2) = 0.018
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3 / +1
Query: 414 CRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLG 515
C RW L P+L +G + Q+E+D II+L G
Sbjct: 244 CLHRWQKVLNPELIKGPWTQEEDDKIIDLVKTYG 345
Score = 32.2 bits (64), Expect(2) = 2e-024
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+L KG W+ EED+K+++ + +G WS + +
Sbjct: 277 ELIKGPWTQEEDDKIIDLVKTYGATKWSVIAR 372
Score = 23.5 bits (45), Expect(2) = 0.018
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSV 377
KG W+ +EDE L + W +
Sbjct: 130 KGGWTSQEDETLRKAVETFNGRSWKKI 210
>gb|CK124499.1|CK124499 BES1824109g02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G029 5-PRIME, mRNA sequence
Length = 796
Score = 101 bits (215), Expect(2) = 2e-024
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GK CR RW N+L PD+++ A+ +EE +I H GN+W++IA LPGRTDN IKN
Sbjct: 385 RIGKQCRERWHNHLNPDIRKDAWTAEEEQALINAHREYGNKWAEIAKVLPGRTDNSIKNH 564
Query: 579 WNSCIKKKL 605
WNS ++KKL
Sbjct: 565 WNSSLRKKL 591
Score = 49.6 bits (102), Expect = 6e-005
Identities = 29/72 (40%), Positives = 32/72 (44%)
Frame = -3 / -3
Query: 619 MPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGL 440
+P +FFL F F I LSVLPG AI HLFP + S A SG
Sbjct: 605 VP*TSNFFLKELFQ*FFIELSVLPGRTFAISAHLFPYSRWALISACSSSAVQASFRMSGF 426
Query: 439 R*FIHLSLQLFP 404
R* HLS P
Sbjct: 425 R*LCHLSRHCLP 390
Score = 35.4 bits (71), Expect(2) = 0.018
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3 / +1
Query: 414 CRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLG 515
C RW L P+L +G + Q+E+D II+L G
Sbjct: 244 CLHRWQKVLNPELIKGPWTQEEDDKIIDLVKTYG 345
Score = 32.2 bits (64), Expect(2) = 2e-024
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3 / +1
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
+L KG W+ EED+K+++ + +G WS + +
Sbjct: 277 ELIKGPWTQEEDDKIIDLVKTYGATKWSVIAR 372
Score = 23.5 bits (45), Expect(2) = 0.018
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSV 377
KG W+ +EDE L + W +
Sbjct: 130 KGGWTSQEDETLRKAVETFNGRSWKKI 210
>gb|BG368576.2|BG368576 HVSMEi0019M02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019M02f, mRNA sequence
Length = 621
Score = 111 bits (237), Expect = 1e-023
Identities = 46/71 (64%), Positives = 52/71 (73%)
Frame = +3 / +1
Query: 363 CWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQ 542
C++ AGL R GKSCRLRW+NYL P LKRG EE LI+ELHA GNRWS+IA +
Sbjct: 406 CFNLCNLHAGLNRTGKSCRLRWVNYLHPGLKRGRMTPHEERLILELHARWGNRWSRIARK 585
Query: 543 LPGRTDNEIKN 575
LP RTDNEIKN
Sbjct: 586 LPRRTDNEIKN 618
Score = 62.5 bits (130), Expect = 8e-009
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = -2 / -1
Query: 575 ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
+LDLI+ PWQL C PPV S+ L DE FF+ +LE ++V PP+ T LS +
Sbjct: 618 VLDLIVGTPWQLPCYPGPPVSPPSM*LKDEAFFMRSHASTLEARVEVVDPPEATALSCAV 439
Query: 395 K 393
+
Sbjct: 438 E 436
Score = 55.1 bits (114), Expect = 1e-006
Identities = 31/63 (49%), Positives = 31/63 (49%)
Frame = -3 / -2
Query: 574 FLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLFPHL* 395
FLISLSV GS AI DHLFP AC P LR G R* H QLFP
Sbjct: 617 FLISLSVRLGSFRAILDHLFPHRACSSRMRRSS*GVMRPRLRPGWR*LTHRRRQLFPVRL 438
Query: 394 SPA 386
PA
Sbjct: 437 RPA 429
>gb|AF189788.1|AF189788 Hordeum vulgare putative c-myb-like transcription factor (MYB3R-1)
mRNA, partial cds
Length = 592
Score = 96.4 bits (204), Expect(2) = 3e-023
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GK CR RW N+L P + + A+ Q+EE +I H + GN+W+++ LPG+TDN IKN
Sbjct: 174 RIGKQCRERWHNHLNPGINKDAWTQEEEITLIHAHRMYGNKWAELTKFLPGKTDNSIKNH 353
Query: 579 WNSCIKKKL 605
WNS +KKK+
Sbjct: 354 WNSSVKKKI 380
Score = 35.9 bits (72), Expect(2) = 5e-004
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIEL 500
R C RW L P+L +G ++++E+D+I+E+
Sbjct: 18 RTDVQCLHRWQKVLNPELIKGPWSKEEDDIIVEM 119
Score = 33.6 bits (67), Expect(2) = 3e-023
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3 / +3
Query: 288 KLRKGLWSPEEDEKLMNHITKHGHGCWSSV 377
+L KG WS EED+ ++ + K+G WS++
Sbjct: 66 ELIKGPWSKEEDDIIVEMVKKYGPKKWSTI 155
Score = 30.9 bits (61), Expect(2) = 8.7
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3 / -1
Query: 601 FFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
FF F FLI LSV PG HLFP
Sbjct: 376 FFFTELFQWFLIELSVFPGKNFVNSAHLFP 287
Score = 28.6 bits (56), Expect(2) = 5e-004
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3 / +3
Query: 519 RWSQIAAQLPGRTDNEIKNLWNS 587
+WS IA LPGR + + W++
Sbjct: 141 KWSTIAQALPGRIGKQCRERWHN 209
Score = 22.1 bits (42), Expect(2) = 8.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / -1
Query: 466 NAPLLRSGLR*FIHL 422
+ PL+ SG R F HL
Sbjct: 85 HGPLINSGFRTFCHL 41
>gb|CA008589.1|CA008589 HU11H04r HU Hordeum vulgare subsp. vulgare cDNA clone HU11H04
5-PRIME, mRNA sequence
Length = 590
Score = 109 bits (232), Expect = 7e-023
Identities = 40/61 (65%), Positives = 53/61 (86%)
Frame = +3 / +3
Query: 417 RLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIK 596
RLRW N+LRP+LK+GAF +EE LII+LH+ +GN+W+++AA LPGRTDNEIKN WN+ IK
Sbjct: 12 RLRWANHLRPNLKKGAFTPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIK 191
Query: 597 K 599
+
Sbjct: 192 R 194
Score = 57.9 bits (120), Expect = 2e-007
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = -2 / -1
Query: 596 LDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQ 420
L + VP IL +IS PWQ+ + P V V+LDDE + GE P LEV P++V PP+
Sbjct: 191 LYSSVPVILYFVISTPWQMSGHPSPLVAHLGVELDDEPLLLGGEGPLLEVGPEVVRPPE 15
Score = 43.2 bits (88), Expect = 0.005
Identities = 25/53 (47%), Positives = 25/53 (47%)
Frame = -3 / -2
Query: 583 FHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIH 425
F F ISLSV PG AAI HL P S AP LR GLR F H
Sbjct: 178 FQ*FFISLSVRPGK*AAIRAHLLPILEWSWMMSLSSSGVKAPFLRLGLRWFAH 20
>gb|BI960298.1|BI960298 HVSMEn0024C09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024C09f, mRNA sequence
Length = 658
Score = 107 bits (228), Expect = 2e-022
Identities = 44/75 (58%), Positives = 48/75 (64%)
Frame = +3 / +2
Query: 513 GNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKPLTEADHGGAAPTISTER 692
GNRWSQ A LPGRTDNEIKN WNSCIKKKLRQ+GIDP THKP+ AD AA +
Sbjct: 2 GNRWSQSAGHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKPMASADTATAAAALPDAG 181
Query: 693 TSGSSDINPSSTGPL 737
+ P G L
Sbjct: 182 EEDRKPLCPEIDGSL 226
Score = 74.4 bits (156), Expect = 2e-012
Identities = 34/53 (64%), Positives = 36/53 (67%)
Frame = -3 / -2
Query: 670 AAPP*SASVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
AA SA GL V GSMP C SFFLM F +FLISLSV PG C A+*DHL P
Sbjct: 159 AAVAVSAEAMGLCVAGSMPCCRSFFLMQLFQKFLISLSVRPGRCPAL*DHLLP 1
Score = 51.5 bits (106), Expect = 2e-005
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2 / -1
Query: 674 GSCTAVISLSKWLVGVGINAFLPQLLLDARVP*ILDLIISPPWQLRCNLRPPV 516
G C + LV ++A LP+LLLDA VP +LDL++ P Q+ LRPPV
Sbjct: 163 GRCRCRVRGGHGLVRGRVDALLPELLLDAAVPEVLDLVVRPARQVPRALRPPV 5
Score = 38.6 bits (78), Expect = 0.12
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +2 / +1
Query: 515 EQVVSNCSAAARED***DQESMELVHQEEAEAERH*SQHPQA 640
+QVVS A A D DQE +E +HQEEA A H H QA
Sbjct: 4 QQVVSERGAPAGPDGQRDQELLEQLHQEEAPAAGHRPGHAQA 129
>gb|CV063142.1|CV063142 BNEL87b1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87b1 5' similar to P0020E09.14,
mRNA sequence
Length = 696
Score = 93.2 bits (197), Expect(2) = 4e-022
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L PD++ F E+ LI+ A GN+W+ IA LPGRTDN +KN
Sbjct: 191 RTGKSCRLRWCNQLSPDVQHRPFTAQEDALIVAAQARYGNKWADIARLLPGRTDNSVKNH 370
Query: 579 WNSCIKKKLRQ 611
WNS +++ R+
Sbjct: 371 WNSNLRRCQRR 403
Score = 33.1 bits (66), Expect = 5.3
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLF 407
EF FL LSV PG A+ HL P AC SGL SL
Sbjct: 378 EFQWFLTELSVRPGXRRAMSAHLLP*RACAATMSASSCAVKGRCCTSGLSWLHQRSLHDL 199
Query: 406 P 404
P
Sbjct: 198 P 196
Score = 32.7 bits (65), Expect(2) = 4e-022
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSV 377
++ G WSPEED L + +HG WS +
Sbjct: 86 VKTGSWSPEEDALLSALVRQHGARRWSVI 172
>gb|CV063485.1|CV063485 BNEL8H1 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL8H1 5' similar to P0020E09.14, mRNA
sequence
Length = 594
Score = 93.2 bits (197), Expect(2) = 4e-022
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L PD++ F E+ LI+ A GN+W+ IA LPGRTDN +KN
Sbjct: 154 RTGKSCRLRWCNQLSPDVQHRPFTAQEDALIVAAQARYGNKWADIARLLPGRTDNSVKNH 333
Query: 579 WNSCIKKKLRQ 611
WNS +++ R+
Sbjct: 334 WNSNLRRCQRR 366
Score = 32.7 bits (65), Expect = 7.3
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3 / -2
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLF 407
EF FL LSV PG A+ HL P AC SGL SL
Sbjct: 341 EFQWFLTELSVRPGRRRAMSAHLLP*RACAATMSASSCAVKGRCCTSGLSWLHQRSLHDL 162
Query: 406 P 404
P
Sbjct: 161 P 159
Score = 32.7 bits (65), Expect(2) = 4e-022
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSV 377
++ G WSPEED L + +HG WS +
Sbjct: 49 VKTGSWSPEEDALLSALVRQHGARRWSVI 135
>gb|CV059557.1|CV059557 BNEL49d7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL49d7 5' similar to P0020E09.14,
mRNA sequence
Length = 500
Score = 93.2 bits (197), Expect(2) = 4e-022
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L PD++ F E+ LI+ A GN+W+ IA LPGRTDN +KN
Sbjct: 154 RTGKSCRLRWCNQLSPDVQHRPFTAQEDALIVAAQARYGNKWADIARLLPGRTDNSVKNH 333
Query: 579 WNSCIKKKLRQ 611
WNS +++ R+
Sbjct: 334 WNSNLRRCQRR 366
Score = 32.7 bits (65), Expect = 7.3
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLF 407
EF FL LSV PG A+ HL P AC SGL SL
Sbjct: 341 EFQWFLTELSVRPGRRRAMSAHLLP*RACAATMSASSCAVKGRCCTSGLSWLHQRSLHDL 162
Query: 406 P 404
P
Sbjct: 161 P 159
Score = 32.7 bits (65), Expect(2) = 4e-022
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSV 377
++ G WSPEED L + +HG WS +
Sbjct: 49 VKTGSWSPEEDALLSALVRQHGARRWSVI 135
>gb|CV057037.1|CV057037 BNEL23d1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23d1 5' similar to P0020E09.14,
mRNA sequence
Length = 641
Score = 92.7 bits (196), Expect(2) = 6e-022
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
R GKSCRLRW N L PD++ F E+ LI+ A GN+W+ IA LPGRTDN +KN
Sbjct: 154 RTGKSCRLRWCNQLSPDVQHRPFTAQEDALIVAAQARYGNKWADIARLLPGRTDNXVKNH 333
Query: 579 WNSCIKKKLRQ 611
WNS +++ R+
Sbjct: 334 WNSNLRRCQRR 366
Score = 33.1 bits (66), Expect = 5.3
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSLQLF 407
EF FL LSV PG A+ HL P AC SGL SL
Sbjct: 341 EFQWFLTXLSVRPGXRRAMSAHLLP*RACAATMSASSCAVKGRCCTSGLSWLHQRSLHDL 162
Query: 406 P 404
P
Sbjct: 161 P 159
Score = 32.7 bits (65), Expect(2) = 6e-022
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSV 377
++ G WSPEED L + +HG WS +
Sbjct: 49 VKTGSWSPEEDALLSALVRQHGARRWSVI 135
>gb|BF627413.1|BF627413 HVSMEb0004M17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004M17f, mRNA sequence
Length = 773
Score = 103 bits (219), Expect = 4e-021
Identities = 44/86 (51%), Positives = 52/86 (60%)
Frame = +3 / +3
Query: 258 MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 437
MGR CC K KG W+ EEDE+L+ H+ HG GCW S+P GL C KS RLR IN
Sbjct: 75 MGRSPCCEKAHTNKGAWTREEDERLVAHVRAHGEGCWRSLPSANGLLHCSKSYRLRRINC 254
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLG 515
LRP L RG F E +L+ L +LG
Sbjct: 255 LRPYLMRGIFFLYEYELM**LRILLG 332
Score = 53.3 bits (110), Expect = 5e-006
Identities = 33/104 (31%), Positives = 52/104 (50%)
Frame = -2 / -1
Query: 515 PEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVI 336
P+ QL + V + + V Q V PQ L+A + G RAPA + + V
Sbjct: 332 PQKDAQLSHKFVLVQEKDTAH*VGAQAVDSPQAVALAAVQQAVGAGQRAPAPLPVRPDVG 153
Query: 335 HEFLILLRGPEPLSQLLLVAARMPPHLNAMQNLGAPTKLTELTG 204
H+ L+LL P L ++ L+AAR PPH ++++ +L+ L G
Sbjct: 152 HQPLVLLPRPRALVRVRLLAARRPPHGRSLRS*WLCVRLSALLG 21
>gb|BJ471839.1|BJ471839 BJ471839 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal21p18 5', mRNA sequence
Length = 566
Score = 89.0 bits (188), Expect(2) = 2e-020
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +3 / +1
Query: 390 GLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQI 533
GL R GKSCRLRW+NYL PDLKRG DEE L+++LHA GNRWS+I
Sbjct: 421 GLNRTGKSCRLRWVNYLHPDLKRGRMTPDEERLVVDLHARWGNRWSRI 564
Score = 35.0 bits (70), Expect(2) = 2e-020
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3 / +1
Query: 294 RKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCG 407
RKG W+ +ED KL + G W + K++GLQ G
Sbjct: 166 RKGPWTEQEDMKLAWFVRLFGERRWDFLAKVSGLQGGG 279
Score = 32.7 bits (65), Expect = 7.3
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2 / -3
Query: 524 PPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLSAPLKPSEFG 378
P V V++DDE V +L+V ++V PP+ L P++ G
Sbjct: 555 PSVAPAGVEVDDEALLVGRHPAALQVGVEVVDPPEAAALPGPVETCRQG 409
>gb|BE455245.2|BE455245 HVSMEh0096L16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096L16f, mRNA sequence
Length = 716
Score = 84.0 bits (177), Expect(2) = 7e-020
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = +3 / +2
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAF 467
L KG W+ ED L++++ KHG G W++V K GL CGKSCRL W N L+P+LK+GAF
Sbjct: 374 LMKGPWTSAEDAILVDYVKKHGEGNWNAVHKNTGLVPCGKSCRLLWANDLKPNLKKGAF 550
Score = 46.4 bits (95), Expect = 5e-004
Identities = 22/39 (56%), Positives = 22/39 (56%)
Frame = -3 / -3
Query: 463 APLLRSGLR*FIHLSLQLFPHL*SPASLGTELQQPWPCF 347
AP LR GLR F H QL PH SP L T Q P PCF
Sbjct: 546 APFLRLGLRSFAHRRRQLLPHGTSPVFLCTAFQFPSPCF 430
Score = 46.4 bits (95), Expect(2) = 4e-006
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = -2 / -2
Query: 470 GECPSLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQ 291
GE P LEV ++V P + L+A +P +R P +A+L +V+H+ +L P PL Q
Sbjct: 553 GEGPLLEVGLEVVRPQKAAALAARDQPGVLVHRVPVPLAVLLHVVHQDGVLRGRPGPLHQ 374
Score = 34.5 bits (69), Expect(2) = 7e-020
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3 / +1
Query: 495 ELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
+L + +GN W+ +AA LP RTDN K K RQ
Sbjct: 580 QLQSQMGNWWAPMAAHLPWRTDNGNKEFLEPLQ*KDCRQ 696
Score = 25.4 bits (49), Expect(2) = 4e-006
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2 / -3
Query: 563 IISPPWQLRCNLRPPVPEDSVQL 495
IIS PWQ+ + PPV ++L
Sbjct: 648 IISTPWQMSGHRSPPVAHLGLKL 580
>gb|BU998160.1|BU998160 HI10C21r HI Hordeum vulgare subsp. vulgare cDNA clone HI10C21
5-PRIME, mRNA sequence
Length = 478
Score = 79.4 bits (167), Expect(2) = 9e-020
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
R GKSCRLRW N L P ++ F DE+D I+ HA GN+W+ IA L GRTDN I
Sbjct: 308 RSGKSCRLRWCNQLSPQVEHRPFTPDEDDTILRAHARFGNKWATIARLLSGRTDNAI 478
Score = 38.6 bits (78), Expect(2) = 9e-020
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
KG WSPEED+ L + +HG WS + K
Sbjct: 209 KGPWSPEEDDALQRLVGRHGARNWSLISK 295
>gb|BI957930.1|BI957930 HVSMEn0012D18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012D18f, mRNA sequence
Length = 869
Score = 96.4 bits (204), Expect = 5e-019
Identities = 40/61 (65%), Positives = 44/61 (72%)
Frame = +3 / +1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
AGL+R GKSCRLRW NYL P LKRG DEE LI+ LHA G RWS+I +LPGR D E
Sbjct: 409 AGLRRTGKSCRLRWGNYLHPGLKRGRITADEERLILTLHAEWGCRWSRIPRKLPGRADTE 588
Query: 567 I 569
I
Sbjct: 589 I 591
Score = 46.9 bits (96), Expect = 4e-004
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = -2 / -3
Query: 569 DLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPPQPTTLS 405
DL + P QL + PP P V+ +DE V G+ P+LE Q+V P +P L+
Sbjct: 591 DLSVGPAGQLPGDSGPPAPPLGVKGEDEALLVGGDAPALEARVQVVAPAEPAALA 427
>gb|BF629773.1|BF629773 HVSMEb0013M11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013M11f, mRNA sequence
Length = 827
Score = 95.9 bits (203), Expect = 7e-019
Identities = 32/60 (53%), Positives = 48/60 (80%)
Frame = +3 / +1
Query: 423 RWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
RW+NYLRPD++ G + + E+ +I L+A +G+RWS I ++LPGRTDN++KN WN+ +KKK
Sbjct: 1 RWLNYLRPDIRHGGYTEQEDRVICSLYASIGSRWSIIGSKLPGRTDNDVKNYWNTKLKKK 180
Score = 34.5 bits (69), Expect = 2.1
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2 / -3
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYPP 423
LLL+ VP +LD+++ +L + P + VQ + +L +V PQ+V PP
Sbjct: 180 LLLELGVPVVLDVVVGAAGELGADDGPAAADGGVQGAYDAVLLLRVAAVPDVRPQVVEPP 1
>gb|CV053601.1|CV053601 BNEL101a9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101a9 5' similar to P0020E09.14,
mRNA sequence
Length = 713
Score = 95.5 bits (202), Expect = 9e-019
Identities = 39/98 (39%), Positives = 58/98 (59%)
Frame = +3 / +1
Query: 318 EDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIE 497
E++ L++ + + SV R GKSCRLRW N + PD++ F E+ LI++
Sbjct: 73 EEDALLSALVRQNGARRWSVISAGVPGRTGKSCRLRWCNQISPDVQHRPFTAQEDSLIVD 252
Query: 498 LHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQ 611
A GN+W+ IA LPGRTDN +KN WNS +++ R+
Sbjct: 253 AQARYGNKWADIARLLPGRTDNSVKNHWNSNLRRCQRR 366
Score = 34.1 bits (68), Expect = 2.8
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = -3 / -1
Query: 586 EFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGL 440
EF FL LSV PGS A+ HL P AC SGL
Sbjct: 341 EFQWFLTELSVRPGSRRAMSAHLLP*RACASTMSESSCAVKGRCCTSGL 195
Score = 32.2 bits (64), Expect(2) = 0.065
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSV 377
++ GLWSPEED L + ++G WS +
Sbjct: 49 VKTGLWSPEEDALLSALVRQNGARRWSVI 135
Score = 28.6 bits (56), Expect(2) = 0.065
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3 / +1
Query: 519 RWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQK 614
RWS I+A +PGRT + W + I ++ +
Sbjct: 121 RWSVISAGVPGRTGKSCRLRWCNQISPDVQHR 216
>gb|BG343686.1|BG343686 HVSMEg0006D17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006D17f, mRNA sequence
Length = 1018
Score = 84.9 bits (179), Expect(2) = 7e-018
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
A L R KSC RW NYLRP +K+G+ DE+ L+I L A GN+W +IAA++PGRT
Sbjct: 98 APLDRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKR 277
Query: 567 IKNLWNSCIKKKLRQ 611
+ W +K+ R+
Sbjct: 278 LGKWWEVFKEKQQRE 322
Score = 36.3 bits (73), Expect = 0.58
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -2 / -1
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
LP LLL +P + + P L +L P V ++ DDE V+GE P L+ ++V
Sbjct: 322 LPLLLLLEHLPPLAKPLGRPARHLGGDLLPLVAVLGLEADDEPLLVVGEGPFLDAGAEVV 143
Query: 431 YP 426
P
Sbjct: 142 LP 137
Score = 33.6 bits (67), Expect = 3.9
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = -3 / -2
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
F ++ H L+V PG+ AAI HL P A S P L G R*F S
Sbjct: 309 FSLNTSHHLPSRLAVRPGTSAAIFFHLLPCLAWRRMTSRCSSSVRDPFLMPGRR*FFQRS 130
Query: 418 LQ 413
Q
Sbjct: 129 RQ 124
Score = 26.7 bits (52), Expect(2) = 7e-018
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3 / +2
Query: 306 WSPEEDEKLMNHITKHGHGCWSSV 377
W PEED L +++ ++G W+ V
Sbjct: 11 WRPEEDAILRSYVRQYGPREWNLV 82
>gb|BG343689.1|BG343689 HVSMEg0006D21f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006D21f, mRNA sequence
Length = 989
Score = 84.9 bits (179), Expect(2) = 7e-018
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
A L R KSC RW NYLRP +K+G+ DE+ L+I L A GN+W +IAA++PGRT
Sbjct: 98 APLDRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKR 277
Query: 567 IKNLWNSCIKKKLRQ 611
+ W +K+ R+
Sbjct: 278 LGKWWEVFKEKQQRE 322
Score = 36.3 bits (73), Expect = 0.58
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
LP LLL +P + + P L +L P V ++ DDE V+GE P L+ ++V
Sbjct: 322 LPLLLLLEHLPPLAKPLGRPARHLGGDLLPLVAVLGLEADDEPLLVVGEGPFLDAGAEVV 143
Query: 431 YP 426
P
Sbjct: 142 LP 137
Score = 33.6 bits (67), Expect = 3.9
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
F ++ H L+V PG+ AAI HL P A S P L G R*F S
Sbjct: 309 FSLNTSHHLPSRLAVRPGTSAAIFFHLLPCLAWRRMTSRCSSSVRDPFLMPGRR*FFQRS 130
Query: 418 LQ 413
Q
Sbjct: 129 RQ 124
Score = 26.7 bits (52), Expect(2) = 7e-018
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3 / +2
Query: 306 WSPEEDEKLMNHITKHGHGCWSSV 377
W PEED L +++ ++G W+ V
Sbjct: 11 WRPEEDAILRSYVRQYGPREWNLV 82
>gb|BF617675.2|BF617675 HVSMEc0018K06f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018K06f, mRNA sequence
Length = 816
Score = 84.9 bits (179), Expect(2) = 7e-018
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
A L R KSC RW NYLRP +K+G+ DE+ L+I L A GN+W +IAA++PGRT
Sbjct: 342 APLDRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKR 521
Query: 567 IKNLWNSCIKKKLRQ 611
+ W +K+ R+
Sbjct: 522 LGKWWEVFKEKQQRE 566
Score = 36.3 bits (73), Expect = 0.58
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
LP LLL +P + + P L +L P V ++ DDE V+GE P L+ ++V
Sbjct: 566 LPLLLLLEHLPPLAKPLGRPARHLGGDLLPLVAVLGLEADDEPLLVVGEGPFLDAGAEVV 387
Query: 431 YP 426
P
Sbjct: 386 LP 381
Score = 33.6 bits (67), Expect = 3.9
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
F ++ H L+V PG+ AAI HL P A S P L G R*F S
Sbjct: 553 FSLNTSHHLPSRLAVRPGTSAAIFFHLLPCLAWRRMTSRCSSSVRDPFLMPGRR*FFQRS 374
Query: 418 LQ 413
Q
Sbjct: 373 RQ 368
Score = 26.7 bits (52), Expect(2) = 7e-018
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3 / +3
Query: 306 WSPEEDEKLMNHITKHGHGCWSSV 377
W PEED L +++ ++G W+ V
Sbjct: 255 WRPEEDAILRSYVRQYGPREWNLV 326
>gb|BQ470201.1|BQ470201 HX02B17r HX Hordeum vulgare subsp. vulgare cDNA clone HX02B17
5-PRIME, mRNA sequence
Length = 603
Score = 84.9 bits (179), Expect(2) = 7e-018
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
A L R KSC RW NYLRP +K+G+ DE+ L+I L A GN+W +IAA++PGRT
Sbjct: 216 APLDRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKR 395
Query: 567 IKNLWNSCIKKKLRQ 611
+ W +K+ R+
Sbjct: 396 LGKWWEVFKEKQQRE 440
Score = 36.3 bits (73), Expect = 0.58
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -2 / -2
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
LP LLL +P + + P L +L P V ++ DDE V+GE P L+ ++V
Sbjct: 440 LPLLLLLEHLPPLAKPLGRPARHLGGDLLPLVAVLGLEADDEPLLVVGEGPFLDAGAEVV 261
Query: 431 YP 426
P
Sbjct: 260 LP 255
Score = 33.6 bits (67), Expect = 3.9
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = -3 / -3
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
F ++ H L+V PG+ AAI HL P A S P L G R*F S
Sbjct: 427 FSLNTSHHLPSRLAVRPGTSAAIFFHLLPCLAWRRMTSRCSSSVRDPFLMPGRR*FFQRS 248
Query: 418 LQ 413
Q
Sbjct: 247 RQ 242
Score = 26.7 bits (52), Expect(2) = 7e-018
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3 / +3
Query: 306 WSPEEDEKLMNHITKHGHGCWSSV 377
W PEED L +++ ++G W+ V
Sbjct: 129 WRPEEDAILRSYVRQYGPREWNLV 200
>gb|BU997080.1|BU997080 HI06N15r HI Hordeum vulgare subsp. vulgare cDNA clone HI06N15
5-PRIME, mRNA sequence
Length = 584
Score = 84.9 bits (179), Expect(2) = 7e-018
Identities = 34/75 (45%), Positives = 47/75 (62%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
A L R KSC RW NYLRP +K+G+ DE+ L+I L A GN+W +IAA++PGRT
Sbjct: 132 APLDRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKR 311
Query: 567 IKNLWNSCIKKKLRQ 611
+ W +K+ R+
Sbjct: 312 LGKWWEVFKEKQQRE 356
Score = 36.3 bits (73), Expect = 0.58
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -2 / -1
Query: 611 LPQLLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIV 432
LP LLL +P + + P L +L P V ++ DDE V+GE P L+ ++V
Sbjct: 356 LPLLLLLEHLPPLAKPLGRPARHLGGDLLPLVAVLGLEADDEPLLVVGEGPFLDAGAEVV 177
Query: 431 YP 426
P
Sbjct: 176 LP 171
Score = 33.6 bits (67), Expect = 3.9
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = -3 / -2
Query: 598 FLMHEFHRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLS 419
F ++ H L+V PG+ AAI HL P A S P L G R*F S
Sbjct: 343 FSLNTSHHLPSRLAVRPGTSAAIFFHLLPCLAWRRMTSRCSSSVRDPFLMPGRR*FFQRS 164
Query: 418 LQ 413
Q
Sbjct: 163 RQ 158
Score = 26.7 bits (52), Expect(2) = 7e-018
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3 / +3
Query: 306 WSPEEDEKLMNHITKHGHGCWSSV 377
W PEED L +++ ++G W+ V
Sbjct: 45 WRPEEDAILRSYVRQYGPREWNLV 116
>gb|BF262578.2|BF262578 HV_CEa0004G02f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0004G02f, mRNA sequence
Length = 869
Score = 90.9 bits (192), Expect = 2e-017
Identities = 31/59 (52%), Positives = 46/59 (77%)
Frame = +3 / +2
Query: 426 WINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
W+ YLRPD+K G + + E+ +I L+ +G+RWS IA++LPGRTDN++KN WN+ +KKK
Sbjct: 2 WLTYLRPDIKHGGYTEQEDMVICSLYNSIGSRWSIIASKLPGRTDNDVKNYWNTKLKKK 178
Score = 42.8 bits (87), Expect = 0.007
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = -2 / -2
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQLDDEVFFVLGECPSLEVWPQIVYP 426
LLL+ VP +LD+++ P +L + RPP + V+ D+ +LG L+V P++ P
Sbjct: 178 LLLELGVPVVLDIVVRPAGKLGRDDRPPASDGVVEGADDHVLLLGVAAVLDVRPEVGEP 2
Score = 41.4 bits (84), Expect = 0.018
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -3 / -3
Query: 607 LSFFLMHEFHRFLISLSVLPGSCAAI*DHLFP 512
++FFL F FL SLSVLPGS A+ DHL P
Sbjct: 183 MAFFLSLVFQ*FLTSLSVLPGSLDAMIDHLLP 88
>gb|BE519986.1|BE519986 HV_CEb0021P13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021P13f, mRNA sequence
Length = 724
Score = 80.8 bits (170), Expect(2) = 5e-017
Identities = 26/70 (37%), Positives = 49/70 (70%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
+ + CR RW NYL + K+G ++++E+ L+ + +LGN+W++IA +PGRTDN +KN
Sbjct: 291 KTARQCRRRWYNYLNTECKKGGWSREEDMLLCDAQKLLGNKWTEIAKVVPGRTDNAVKNR 470
Query: 579 WNSCIKKKLR 608
+++ K++ +
Sbjct: 471 FSTLCKRRAK 500
Score = 40.5 bits (82), Expect = 0.033
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = -3 / -1
Query: 580 HRFLISLSVLPGSCAAI*DHLFPRTACXXXXXXXXSWANAPLLRSGLR*FIHLSL 416
+RF +LSVLPG+ AI HL PR+ S + P L S R* HL L
Sbjct: 472 NRFFTALSVLPGTTFAISVHLLPRSF*ASHKSMSSSRDHPPFLHSVFR*LYHLLL 308
Score = 28.1 bits (55), Expect(2) = 5e-017
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3 / +3
Query: 306 WSPEEDEKLMNHITKHGHGCWSSV 377
WS EED+ L I HG W+ +
Sbjct: 201 WSAEEDDVLRAQIAHHGTDNWAVI 272
>gb|AJ434757.1|AJ434757 AJ434757 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200054B09F2, mRNA sequence
Length = 502
Score = 56.5 bits (117), Expect(3) = 1e-015
Identities = 27/65 (41%), Positives = 37/65 (56%)
Frame = -2 / -2
Query: 1901 LPTHAFLPMAIYIYLISTRENKNSNMQKFSRVQKENINFQEKGKETLEHTFLCILLQLLM 1722
LPTHA P+ +Y++ +S + RVQK+ + K +ET E TFLC L+ LLM
Sbjct: 306 LPTHAVFPIPVYLFDKQRVNKNSSIQKLSCRVQKKTTILKRKERETPECTFLCNLMPLLM 127
Query: 1721 PGLSF 1707
LSF
Sbjct: 126 TELSF 112
Score = 53.8 bits (111), Expect(4) = 4e-015
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +1 / +2
Query: 1627 CSHRYVKLIQKSSSTAVPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFPFS*KLMFSFC 1806
C RY +LIQ S+ST +S KD+ IRS ++HRKV S VS F K++ FC
Sbjct: 32 CIDRYARLIQ*STSTTFLG*RSCSATXKDNSVIRSGIKLHRKVHSGVSLSFLFKIVVFFC 211
Query: 1807 TR 1812
TR
Sbjct: 212 TR 217
Score = 45.5 bits (93), Expect(3) = 1e-009
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2 / +3
Query: 1703 KERTALALEVAAGCIGKYVLESPFLSLEN*CFPSVHD 1813
+E+ L+ VA+ C KY+LESPFLS F SVHD
Sbjct: 108 REKITLSSGVASNCTEKYILESPFLSSSKLLFSSVHD 218
Score = 43.7 bits (89), Expect(5) = 4e-012
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -1 / -1
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLS 1705
SCTE + F ERKGDSR YF + AT + R + S
Sbjct: 217 SCTEENNNFEEERKGDSRMYFSVQFDATPDDRVIFS 110
Score = 43.2 bits (88), Expect(2) = 2e-004
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = -3 / -3
Query: 1816 SVVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEEQLWRMISVST*RI 1637
+VVYRRK + K+ RL N+L A C+ * Q F + +LWR+I+VST I
Sbjct: 221 AVVYRRKQQF*RGKKGRLQNVLFCAI*CHS**QSYLFXWHCMIFSRGRLWRLITVSTSHI 42
Query: 1636 YV 1631
Y+
Sbjct: 41 YL 36
Score = 38.6 bits (78), Expect(3) = 1e-015
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -2 / -3
Query: 1991 KEMKNTTCNN*FAWTCMAAVESLG 1920
K KNT+CN *F TCMAAVE G
Sbjct: 404 KRYKNTSCNI*FESTCMAAVEKFG 333
Score = 33.1 bits (66), Expect(4) = 4e-015
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1 / +1
Query: 1918 SPKLSTAAMHVHAN*LLHVVF 1980
+P STAAMHV +N*+L +VF
Sbjct: 331 APNFSTAAMHVDSN*ILQLVF 393
Score = 30.9 bits (61), Expect(3) = 1e-009
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3 / +3
Query: 1920 PQTFNCCHACPCKLIIACCIFHFF 1991
P+ FN CHA +L IA CIF F
Sbjct: 333 PKLFNSCHARRFELNIATCIFISF 404
Score = 27.2 bits (53), Expect(5) = 4e-012
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -3 / -1
Query: 1981 KIQHAIINLHGHAWQQLKVWGYLHV 1907
KIQ AI N + AWQ LK G L V
Sbjct: 394 KIQVAIFNSNLRAWQLLKSLGLLLV 320
Score = 26.3 bits (51), Expect(3) = 1e-015
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 1670 VEDDFCINLTYLCEQ 1626
VE D+CINL YL Q
Sbjct: 75 VEVDYCINLAYLSMQ 31
Score = 25.8 bits (50), Expect(5) = 4e-012
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 1906 ESYRHMHFCLWLSIFI 1859
+SYRHM F +LSI++
Sbjct: 311 DSYRHMQFFPFLSIYL 264
Score = 25.4 bits (49), Expect(4) = 4e-015
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 1817 TFAYLSFCSL 1846
TF YLSFCSL
Sbjct: 225 TFGYLSFCSL 254
Score = 24.4 bits (47), Expect(3) = 1e-009
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1 / +2
Query: 1789 LMFSFCTRLNFCIFEFLFSL 1848
++F +LNF I EFLF+L
Sbjct: 197 VVFFCTRQLNFWILEFLFTL 256
Score = 24.0 bits (46), Expect(4) = 4e-015
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 1866 IDSHRQKCMCR*LS 1907
ID + + CMCR*LS
Sbjct: 271 IDRNGKNCMCR*LS 312
Score = 22.6 bits (43), Expect(5) = 4e-012
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 1671 CGG*FLYQLNVSM 1633
CGG* LYQ +S+
Sbjct: 76 CGG*LLYQPRISI 38
Score = 22.6 bits (43), Expect(2) = 2e-004
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 1902 ATDTCIFAYGYLYL 1861
ATDTC F++ L++
Sbjct: 307 ATDTCSFSHSCLFI 266
Score = 22.1 bits (42), Expect(5) = 4e-012
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 1848 QREQKLKYAKVQ 1813
+ EQKLKY KV+
Sbjct: 256 ESEQKLKYPKVE 221
>gb|BG344708.2|BG344708 HVSMEg0015E16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015E16f, mRNA sequence
Length = 579
Score = 84.5 bits (178), Expect = 2e-015
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +3 / +2
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIA 536
AGL+R GKSCRLRW+NYL P LKRG DEE L + LHA G+RWS+IA
Sbjct: 428 AGLRRTGKSCRLRWVNYLHPGLKRGRITXDEERLXLTLHAEWGSRWSRIA 577
>gb|BQ472089.1|BQ472089 HV04G01r HV Hordeum vulgare subsp. vulgare cDNA clone HV04G01
5-PRIME, mRNA sequence
Length = 296
Score = 65.7 bits (137), Expect(2) = 3e-015
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQL 545
R GKSCRLRW N L P ++ F DE+D I+ HA GN+W+ IA L
Sbjct: 75 RSGKSCRLRWCNQLSPQVEHRPFTPDEDDTILRAHARFGNKWATIARLL 221
Score = 37.3 bits (75), Expect(2) = 3e-015
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 543 LPGRTDNEIKNLWNSCIKKK 602
L GRTDN IKN WNS +K+K
Sbjct: 221 LXGRTDNAIKNHWNSTLKRK 280
>gb|BG415047.2|BG415047 HVSMEk0004N16f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0004N16f, mRNA sequence
Length = 546
Score = 66.1 bits (138), Expect(3) = 9e-015
Identities = 31/75 (41%), Positives = 43/75 (57%)
Frame = -2 / -2
Query: 1901 LPTHAFLPMAIYIYLISTRENKNSNMQKFSRVQKENINFQEKGKETLEHTFLCILLQLLM 1722
LPTHA P +Y++ +S + RVQK+ + K +ET E TFLC L+ LLM
Sbjct: 359 LPTHAVFPNPVYLFDKQRVNKTSSIQKLSCRVQKKTTILKRKERETPECTFLCNLMPLLM 180
Query: 1721 PGLSFP*YCQLFN*G 1677
LSFP +C +F+ G
Sbjct: 179 TELSFPWHCMIFSRG 135
Score = 49.6 bits (102), Expect(3) = 4e-008
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +1 / +1
Query: 1675 VPQLKSWQYQGKDSPGIRSCSRMHRKVCSRVSFPFS*KLMFSFCTR 1812
+P+LK Q GKD+ IRS ++HRKV S VS F K++ FCTR
Sbjct: 133 LPRLKIMQCHGKDNSVIRSGIKLHRKVHSGVSLSFLFKIVVFFCTR 270
Score = 47.8 bits (98), Expect = 2e-004
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +2 / +2
Query: 1676 FLS*RAGNIKERTALALEVAAGCIGKYVLESPFLSLEN*CFPSVHD 1813
FL *R+ + E+ L+ VA+ C KY+LESPFLS F VHD
Sbjct: 134 FLG*RSCSATEKITLSSGVASNCTEKYILESPFLSSSKLLFSFVHD 271
Score = 43.7 bits (89), Expect(4) = 1e-009
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -1 / -1
Query: 1812 SCTEGKHQFSRERKGDSRTYFPMHPAATSNARAVLSLIL 1696
SCT+ + F ERKGDSR YF + AT + R + S+ L
Sbjct: 270 SCTKENNNFEEERKGDSRMYFSVQFDATPDDRVIFSVAL 154
Score = 29.5 bits (58), Expect(2) = 1.7
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = -3 / -3
Query: 1816 SVVYRRKTSIFKRKERRL*NILSYASCCNF*CQGCPFLDIASSSTEE 1676
+VVY+RK + K+ RL N+L A C+ * Q F A S EE
Sbjct: 274 AVVYKRKQQF*RGKKGRLQNVLFCAI*CHS**QSYLFRGTA*SLAEE 134
Score = 26.3 bits (51), Expect(3) = 9e-015
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 1670 VEDDFCINLTYLCEQ 1626
VE D+CINL YL Q
Sbjct: 129 VEVDYCINLAYLSMQ 85
Score = 25.8 bits (50), Expect(3) = 9e-015
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = -1 / -3
Query: 1590 RVSASSDLLCSMW 1552
+VSAS+D+LCSM+
Sbjct: 49 QVSASADMLCSMY 11
Score = 25.4 bits (49), Expect(4) = 1e-009
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 1675 QLWRMISVST*RIYV 1631
+LWR+I+VST IY+
Sbjct: 134 RLWRLITVSTSHIYL 90
Score = 24.0 bits (46), Expect(4) = 1e-009
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3 / -3
Query: 1906 ESYRHMHFCLWLSIFI 1859
+SYRHM F LSI++
Sbjct: 364 DSYRHMQFFPILSIYL 317
Score = 23.5 bits (45), Expect(4) = 1e-009
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2 / -1
Query: 1580 LLLICSVPC 1554
LLLICS PC
Sbjct: 39 LLLICSAPC 13
Score = 23.5 bits (45), Expect(3) = 4e-008
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 1817 TFAYLSFCSL 1846
TF YL FCSL
Sbjct: 278 TFGYLKFCSL 307
Score = 22.6 bits (43), Expect(2) = 1.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 1671 CGG*FLYQLNVSM 1633
CGG* LYQ +S+
Sbjct: 130 CGG*LLYQPRISI 92
Score = 22.1 bits (42), Expect(3) = 4e-008
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 1866 IDSHRQKCMCR*LS 1907
ID + CMCR*LS
Sbjct: 324 IDRIGKNCMCR*LS 365
>gb|BM101125.2|BM101125 EBpi01_SQ002_P05_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_P05 5', mRNA sequence
Length = 308
Score = 63.8 bits (133), Expect(2) = 1e-013
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = +3 / +2
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIA 536
R GKSCRLRW N L P ++R F +E+ I HA LGNRW+ IA
Sbjct: 167 RSGKSCRLRWCNQLSPGVERXPFTAEEDAAIARAHARLGNRWAAIA 304
Score = 33.6 bits (67), Expect(2) = 1e-013
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSV 377
+G WSPEED L + +HG W+++
Sbjct: 68 RGPWSPEEDGALRRLVERHGARNWTAI 148
>gb|BG416961.1|BG416961 HVSMEk0015G09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0015G09f, mRNA sequence
Length = 489
Score = 73.9 bits (155), Expect = 3e-012
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +3 / +2
Query: 492 IELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKGIDPNTHKP 641
+ LHA LGN+WS+IA LPGRTDNE+KN WNS +KK++ PN+ P
Sbjct: 2 MSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRVEGGKGAPNSPTP 151
Score = 50.1 bits (103), Expect = 4e-005
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = -3 / -1
Query: 649 SVSGLWVLGSMPFCLSFFLMHEFHRFLISLSVLPGSCAAI*DHLFPRTA 503
+ +G+ LG+ + FL EF FL SLSVLPG C AI DHL PR A
Sbjct: 159 AAAGVGELGAPLPPSTLFLR*EFQ*FLTSLSVLPGKCRAILDHLLPRAA 13
Score = 40.5 bits (82), Expect = 0.033
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -2 / -3
Query: 599 LLDARVP*ILDLIISPPWQLRCNLRPPVPEDSVQ 498
LL+ VP +LDL++ PP Q+ C+ RP V E V+
Sbjct: 109 LLEVGVPVVLDLVVGPPRQMPCDPRPLVAEGGVK 8
>gb|BJ472224.1|BJ472224 BJ472224 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32o08 5', mRNA sequence
Length = 546
Score = 73.5 bits (154), Expect = 4e-012
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3 / +3
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGN 518
AGL+R GKSCRLRW+NYL P LKRG DEE LI+ LHA G+
Sbjct: 414 AGLRRTGKSCRLRWVNYLHPGLKRGRITADEERLILTLHAEWGS 545
>gb|BF255712.3|BF255712 HVSMEf0007J14f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007J14f, mRNA sequence
Length = 852
Score = 46.0 bits (94), Expect(2) = 4e-011
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3 / +1
Query: 387 AGLQRCGKSCRLRWINYLRPDLKRG 461
AGL+R SCRL W+NYL P LKRG
Sbjct: 391 AGLRRTRNSCRLPWVNYLHPGLKRG 465
Score = 42.8 bits (87), Expect(2) = 4e-011
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3 / +3
Query: 456 RGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKK 602
R A D+E L + LHA G W I + GR D EI + W + ++KK
Sbjct: 462 RAASLGDDEHLFLTLHAEWGFLWYSIEREHHGRADYEIWHYWRTLMRKK 608
>gb|AF189787.1|AF189787 Hordeum vulgare putative c-myb-like transcription factor (MYB3R-1)
gene, partial cds
Length = 2517
Score = 54.2 bits (112), Expect(2) = 4e-011
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +3 / +1
Query: 420 LRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
+RW N+L P + + A+ Q+EE +I H + GN+W+++ LPG+ N +
Sbjct: 1453 IRWHNHLNPGINKDAWTQEEEITLIHAHRMYGNKWAELTKFLPGK*LNNV 1602
Score = 40.0 bits (81), Expect(2) = 4e-011
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 546 PGRTDNEIKNLWNSCIKKKL 605
P RTDN IKN WNS +KKK+
Sbjct: 2246 PARTDNSIKNHWNSSVKKKI 2305
>gb|BM442518.2|BM442518 EBan01_SQ003_G12_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_G12 5', mRNA sequence
Length = 137
Score = 65.7 bits (137), Expect = 9e-010
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSC 416
L+KG W+ ED+ L++H+ +HG G W++V + GLQRCGKSC
Sbjct: 12 LKKGPWTQAEDKVLLDHVRRHGEGNWNAVRRETGLQRCGKSC 137
>gb|BG415768.1|BG415768 HVSMEk0007M02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007M02f, mRNA sequence
Length = 670
Score = 56.5 bits (117), Expect = 5e-007
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +3 / +3
Query: 453 KRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNS 587
K + + ++ L+I+ H + GNRWS IA LPGR++N +KN WN+
Sbjct: 60 KEHIWTEADDILLIDAHKIHGNRWSSIARCLPGRSENAVKNHWNA 194
Score = 38.2 bits (77), Expect = 0.16
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLII 494
R GK CR RW N++RP +K+ + +D+++
Sbjct: 3 RIGKQCRERWTNHVRPGIKKEHIWTEADDILL 98
>gb|BF617445.3|BF617445 HVSMEc0017G08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0017G08f, mRNA sequence
Length = 574
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 164 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 280
>gb|AV909344.1|AV909344 AV909344 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12h22 5', mRNA sequence
Length = 506
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 170 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 286
>gb|AV911235.1|AV911235 AV911235 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12h22 3', mRNA sequence
Length = 491
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 319 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 203
>gb|AV922828.1|AV922828 AV922828 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2i08 5', mRNA sequence
Length = 458
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 175 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 291
>gb|AV922837.1|AV922837 AV922837 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2j01 5', mRNA sequence
Length = 425
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 175 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 291
>gb|AV924475.1|AV924475 AV924475 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14l15 5', mRNA sequence
Length = 552
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 179 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 295
>gb|AV924476.1|AV924476 AV924476 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14l16 5', mRNA sequence
Length = 498
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 125 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 241
>gb|AV927549.1|AV927549 AV927549 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2i08 3', mRNA sequence
Length = 433
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -1
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 310 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 194
>gb|AV927559.1|AV927559 AV927559 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2j01 3', mRNA sequence
Length = 484
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -3
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 320 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 204
>gb|AV929566.1|AV929566 AV929566 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14l15 3', mRNA sequence
Length = 519
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 353 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 237
>gb|AV932316.1|AV932316 AV932316 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3c04 5', mRNA sequence
Length = 539
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 172 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 288
>gb|AV935165.1|AV935165 AV935165 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3c04 3', mRNA sequence
Length = 518
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 343 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 227
>gb|BJ447171.1|BJ447171 BJ447171 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak14f07 5', mRNA sequence
Length = 445
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 100 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 216
>gb|BJ454672.1|BJ454672 BJ454672 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak14f07 3', mRNA sequence
Length = 419
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 310 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 194
>gb|BJ469328.1|BJ469328 BJ469328 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20f13 5', mRNA sequence
Length = 492
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 164 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 280
>gb|BJ470047.1|BJ470047 BJ470047 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15a05 5', mRNA sequence
Length = 391
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 173 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 289
>gb|BJ471394.1|BJ471394 BJ471394 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18c22 5', mRNA sequence
Length = 543
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 176 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 292
>gb|BJ472498.1|BJ472498 BJ472498 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34o06 5', mRNA sequence
Length = 542
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 175 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 291
>gb|BJ472717.1|BJ472717 BJ472717 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36g01 5', mRNA sequence
Length = 553
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / +3
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 186 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 302
>gb|BJ473521.1|BJ473521 BJ473521 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15a05 3', mRNA sequence
Length = 495
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 320 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 204
>gb|BJ474001.1|BJ474001 BJ474001 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal18c22 3', mRNA sequence
Length = 475
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 300 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 184
>gb|BJ474636.1|BJ474636 BJ474636 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20f13 3', mRNA sequence
Length = 488
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 310 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 194
>gb|BJ476463.1|BJ476463 BJ476463 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34o06 3', mRNA sequence
Length = 523
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 348 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 232
>gb|BJ476673.1|BJ476673 BJ476673 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36g01 3', mRNA sequence
Length = 475
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 300 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 184
>gb|BU994484.1|BU994484 HM07D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM07D17
5-PRIME, mRNA sequence
Length = 525
Score = 56.1 bits (116), Expect = 7e-007
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +3 / -2
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + EEDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 383 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAEEVEMFW 267
>gb|BF630934.2|BF630934 HVSMEb0014H13f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014H13f, mRNA sequence
Length = 882
Score = 55.6 bits (115), Expect = 9e-007
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = +3 / +1
Query: 522 WSQIAAQLPGRTDNEIKNLWNSCIKKKL 605
WS IAA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 97 WSAIAARLPGRTDNEIKNVWHTHLKKRL 180
Score = 41.4 bits (84), Expect = 0.018
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCAAI*DHL 518
S FL H FLISLSVLPGS AAI DH+
Sbjct: 179 SRFLRWVCHTFLISLSVLPGSLAAIADHV 93
>gb|BI956991.1|BI956991 HVSMEn0006L18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0006L18f, mRNA sequence
Length = 653
Score = 54.7 bits (113), Expect = 2e-006
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +3 / +1
Query: 456 RGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEI 569
RG DEE LI+ LHA G+RWS+IA +LPGRT N +
Sbjct: 1 RGRITADEERLILTLHAEWGSRWSRIARKLPGRTANSL 114
>gb|BI953245.1|BI953245 HVSMEm0011N11f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0011N11f, mRNA sequence
Length = 611
Score = 54.2 bits (112), Expect = 2e-006
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +3 / +1
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 581
F + +EDL+ +H ++GNRW IA ++PGRT E++ W
Sbjct: 145 FTEAKEDLVFRMHRLVGNRWELIAGRIPGRTAQEVEMFW 261
>gb|CV059811.1|CV059811 BNEL51c10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL51c10 5' similar to myb-related
protein, 33.3K - Arabidopsis thaliana, mRNA sequence
Length = 608
Score = 40.5 bits (82), Expect(2) = 4e-006
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3 / +3
Query: 438 LRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKK 599
++P F E L + A GN+ + PGRTDN +KN WNS +++
Sbjct: 222 VKPGRAEPPFNGPEGRLNVAGQAPFGNKGVEFGGFFPGRTDNFVKNHWNSNLRR 383
Score = 31.3 bits (62), Expect(2) = 4e-006
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSV 377
++ G WSPEED L + +HG W+ +
Sbjct: 79 VKTGSWSPEEDALLSALVRQHGARRWTVI 165
>gb|BF616485.2|BF616485 HVSMEc0010B15f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0010B15f, mRNA sequence
Length = 772
Score = 39.6 bits (80), Expect(2) = 7e-006
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNR 521
R GKSCRLRW N L ++ F +++ I+ LH+ L ++
Sbjct: 126 RSGKSCRLRWCNQLSRGVEHRPFTAEDDADILLLHSRLNDQ 248
Score = 31.3 bits (62), Expect(2) = 7e-006
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSV 377
+G SPEEDE L + +HG W+++
Sbjct: 27 RGRGSPEEDEALRRLVERHGARNWTAI 107
>gb|BF254573.2|BF254573 HVSMEf0004G11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004G11f, mRNA sequence
Length = 867
Score = 51.5 bits (106), Expect = 2e-005
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3 / +1
Query: 558 DNEIKNLWNSCIKKKLRQKGIDPNTHKPLTE 650
DNEIKN WN+ ++KKL GIDP TH+P T+
Sbjct: 1 DNEIKNYWNTHLRKKLLGMGIDPVTHRPRTD 93
>gb|BQ767987.1|BQ767987 EBro08_SQ010_K07_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_K07 5', mRNA sequence
Length = 367
Score = 51.5 bits (106), Expect = 2e-005
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +3 / +2
Query: 564 EIKNLWNSCIKKKLRQKGIDPNTHKPLT 647
EIKN WN+ IK+KL +G+DP+TH+PLT
Sbjct: 2 EIKNYWNTHIKRKLLSRGMDPHTHRPLT 85
>gb|CA011819.1|CA011819 HT03K05r HT Hordeum vulgare subsp. vulgare cDNA clone HT03K05
5-PRIME, mRNA sequence
Length = 615
Score = 47.3 bits (97), Expect = 3e-004
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = +3 / +3
Query: 534 AAQLPGRTDNEIKNLWNSCIKKKL 605
AA+LPGRTDNEIKN+W++ +KK+L
Sbjct: 12 AARLPGRTDNEIKNVWHTHLKKRL 83
Score = 34.5 bits (69), Expect = 2.1
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 604 SFFLMHEFHRFLISLSVLPGSCAA 533
S FL H FLISLSVLPGS AA
Sbjct: 82 SRFLRWVCHTFLISLSVLPGSLAA 11
>gb|BQ768047.1|BQ768047 EBro08_SQ010_E18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_E18 5', mRNA sequence
Length = 505
Score = 45.5 bits (93), Expect = 0.001
Identities = 16/23 (69%), Positives = 22/23 (95%)
Frame = +3 / +2
Query: 537 AQLPGRTDNEIKNLWNSCIKKKL 605
A+LPGRTDNEIKN+W++ +KK+L
Sbjct: 2 ARLPGRTDNEIKNVWHTHLKKRL 70
Score = 32.7 bits (65), Expect = 7.3
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = -3 / -2
Query: 604 SFFLMHEFHRFLISLSVLPGSCA 536
S FL H FLISLSVLPGS A
Sbjct: 69 SRFLRWVCHTFLISLSVLPGSLA 1
>gb|CA006699.1|CA006699 HU05H10r HU Hordeum vulgare subsp. vulgare cDNA clone HU05H10
5-PRIME, mRNA sequence
Length = 646
Score = 45.5 bits (93), Expect = 0.001
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +3 / +1
Query: 537 AQLPGRTDNEIKNLWNSCIKK 599
AQLPGRTDNEIKN WN+ IK+
Sbjct: 10 AQLPGRTDNEIKNYWNTRIKR 72
>gb|CA007589.1|CA007589 HU08G21r HU Hordeum vulgare subsp. vulgare cDNA clone HU08G21
5-PRIME, mRNA sequence
Length = 263
Score = 34.1 bits (68), Expect(2) = 0.001
Identities = 9/36 (25%), Positives = 23/36 (63%)
Frame = +3 / +3
Query: 393 LQRCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIEL 500
+++ K C+ RW +L P +K+ + ++E++ ++ L
Sbjct: 141 VRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLXL 248
Score = 29.0 bits (57), Expect(2) = 0.001
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3 / +3
Query: 291 LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKL 386
++ G+W EDE L + K+G W+ + L
Sbjct: 42 IKGGVWKNTEDEILKAAVMKYGKNQWARISSL 137
>gb|CB880014.1|CB880014 HM05D17w HM Hordeum vulgare subsp. vulgare cDNA clone HM05D17
3-PRIME, mRNA sequence
Length = 561
Score = 42.8 bits (87), Expect = 0.007
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3 / +3
Query: 465 FAQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNL 578
F + EEDL+ +H ++GNRW IA ++P + +++
Sbjct: 180 FTEAEEDLVFRMHRLVGNRWELIAGRIPXKNSRRSRDV 293
>gb|BJ463972.1|BJ463972 BJ463972 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31e20 5', mRNA sequence
Length = 447
Score = 41.8 bits (85), Expect = 0.013
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3 / +3
Query: 525 SQIAAQLPGRTDNEIKNLWNSCIKKK 602
++++ LPGRTDN IKN W+S +KKK
Sbjct: 3 AELSKFLPGRTDNAIKNHWHSSVKKK 80
>gb|BU970342.1|BU970342 HB14F18r BC Hordeum vulgare subsp. vulgare cDNA clone HB14F18
5-PRIME, mRNA sequence
Length = 632
Score = 31.3 bits (62), Expect(2) = 0.014
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3 / +1
Query: 306 WSPEEDEKLMNHITKHGHGCWSSV 377
WS EED+ L I KHG W +V
Sbjct: 424 WSEEEDKMLTQMINKHGLKNWQTV 495
Score = 28.1 bits (55), Expect(2) = 0.014
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLG 515
R CR RW + + + A+++ EE +I H + G
Sbjct: 514 RSAPQCRQRWRYKIDSAINKEAWSEQEELRLIRAHQIYG 630
>gb|BI952922.1|BI952922 HVSMEm0008H03f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0008H03f, mRNA sequence
Length = 954
Score = 30.9 bits (61), Expect(3) = 0.45
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -1 / -2
Query: 321 PPQGTRAPFSASACSSKNASPSQRNAEPGSSNQTHRAYRSAE 196
PP +R C++ P Q E S +T AY+ E
Sbjct: 266 PPDDSRGDEQVHRCAADGGGPHQGQEEDDDSRETSAAYKQGE 141
Score = 24.4 bits (47), Expect(3) = 0.45
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3 / -2
Query: 1141 ALLPMPVPPCRGLSGGRFSP 1082
A LP+P+ PC G+S P
Sbjct: 767 ARLPVPLGPCPGVSARPIPP 708
Score = 21.7 bits (41), Expect(3) = 0.45
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 473 LGECPSLEVWPQIVYPPQPTTLSAPL 396
L CP + P+ PP+P + +A L
Sbjct: 512 LSACPLAPLTPRPPPPPRPFSSTASL 435
>gb|BF262471.2|BF262471 HV_CEa0004A18f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0004A18f, mRNA sequence
Length = 911
Score = 27.2 bits (53), Expect(2) = 0.50
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +3
Query: 818 TKLGTP*AATKGAVPGAAYCWTRE 889
T+ +P A++GA+ A Y WTRE
Sbjct: 657 TQPTSPVPASRGALGSARYPWTRE 728
Score = 26.7 bits (52), Expect(2) = 0.50
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1 / +2
Query: 673 PPSAPREPQGPATSTHQA 726
PP PR P P +TH A
Sbjct: 620 PPRVPRNPNPPKNTTHLA 673
>gb|BG369497.1|BG369497 HVSMEi0024K11f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024K11f, mRNA sequence
Length = 896
Score = 28.1 bits (55), Expect(2) = 0.68
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2 / -3
Query: 461 PSLEVWPQIVYPPQPTTLSAPLKPS 387
P P PPQP LSAP +P+
Sbjct: 456 PPPSTHPSAQTPPQPMALSAPRRPA 382
Score = 25.4 bits (49), Expect(2) = 0.68
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -1 / -1
Query: 324 HPPQGTRAPFSASACSSKNASPSQRNA 244
H P PFS S C +PS NA
Sbjct: 407 HSPPPAGQPFSISWCPHHTLAPSTPNA 327
>gb|BI960454.1|BI960454 HVSMEn0024K11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K11f, mRNA sequence
Length = 684
Score = 30.4 bits (60), Expect(2) = 1.2
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1 / -3
Query: 625 PTPTSHLLRLITAVQLPPSAPREPQGPATSTHQALV 732
P P L L A PPS+PR P+ PA T V
Sbjct: 505 PPPLPPLTSLRRAPSPPPSSPRTPRPPAYHTDAPFV 398
Score = 22.1 bits (42), Expect(2) = 1.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2 / -3
Query: 731 SSGELEPPPQRDG 769
SSG PPP+R G
Sbjct: 286 SSGPXPPPPRRAG 248
>gb|BG369799.1|BG369799 HVSMEi0026B10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0026B10f, mRNA sequence
Length = 503
Score = 35.0 bits (70), Expect = 1.5
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -2 / -3
Query: 542 LRCNLRPPVPEDSVQLDDEV 483
L C +RPPVP+ SV LDD+V
Sbjct: 435 LVCRVRPPVPQGSVGLDDDV 376
>gb|BG367208.2|BG367208 HVSMEi0011F02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011F02f, mRNA sequence
Length = 511
Score = 35.0 bits (70), Expect = 1.5
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 542 LRCNLRPPVPEDSVQLDDEV 483
L C +RPPVP+ SV LDD+V
Sbjct: 193 LVCRVRPPVPQGSVGLDDDV 134
>gb|BG369679.2|BG369679 HVSMEi0025H12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025H12f, mRNA sequence
Length = 695
Score = 35.0 bits (70), Expect = 1.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3 / +2
Query: 480 EDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
E ++ + + NRW+ +AAQLPGRT +E
Sbjct: 185 ESALVAVPEHVPNRWAFVAAQLPGRTPHE 271
>gb|BM442949.2|BM442949 EBro02_SQ002_A04_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_A04 5', mRNA sequence
Length = 424
Score = 35.0 bits (70), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1 / +3
Query: 625 PTPTSHLLRLITAVQLPPSAPREPQGPATST 717
P PT+ + + QL P APR+P P++ST
Sbjct: 3 PRPTNPTMEVAAPKQLLPMAPRDPNSPSSST 95
>gb|BQ763613.1|BQ763613 EBro02_SQ008_N22_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_N22 5', mRNA sequence
Length = 443
Score = 35.0 bits (70), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1 / +1
Query: 625 PTPTSHLLRLITAVQLPPSAPREPQGPATST 717
P PT+ + + QL P APR+P P++ST
Sbjct: 22 PRPTNPTMEVAAPKQLLPMAPRDPNSPSSST 114
>gb|BQ764255.1|BQ764255 EBan01_SQ005_G10_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_G10 5', mRNA sequence
Length = 559
Score = 35.0 bits (70), Expect = 1.5
Identities = 24/76 (31%), Positives = 33/76 (43%)
Frame = -1 / +1
Query: 426 TSAYNSFRTFEAQRVWEQSSSSHGHALLCDS*VSHPPQGTRAPFSASACSSKNASPSQRN 247
T+A RT W + +S+ S P RA S+S+ S+ ASPS
Sbjct: 205 TTAVRRRRTRSWATRWWRCASTRTRTARTRSSGPSTPSWARARPSSSSTSTPKASPSAWR 384
Query: 246 AEPGSSNQTHRAYRSA 199
PGSS+ R RS+
Sbjct: 385 TPPGSSSPPTRTSRSS 432
>gb|BU994848.1|BU994848 HM08G09r HM Hordeum vulgare subsp. vulgare cDNA clone HM08G09
5-PRIME, mRNA sequence
Length = 617
Score = 35.0 bits (70), Expect = 1.5
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -2 / -3
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLC 345
SL P I P T L+ PLKP + PAA A LC
Sbjct: 450 SLSCIPTIPLPKNSTELACPLKPFPCRDELPAAPACLC 337
>gb|CA032394.1|CA032394 HX12O13r HX Hordeum vulgare subsp. vulgare cDNA clone HX12O13
5-PRIME, mRNA sequence
Length = 608
Score = 35.0 bits (70), Expect = 1.5
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3 / -1
Query: 348 KHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFAQD 476
++ HGC SS + GL RCG+S R R P L A D
Sbjct: 251 EYSHGCKSSKKDVRGLGRCGRSGRGRTPRRSTPQLPAATAAPD 123
>gb|BF259054.2|BF259054 HVSMEf0017I14f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017I14f, mRNA sequence
Length = 809
Score = 29.9 bits (59), Expect(2) = 1.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 828 ARPKLPPKELFLEQLTAGHESP 893
ARP LPP EL L ++ AG P
Sbjct: 385 ARPLLPPVELLLRRVQAGRTPP 450
Score = 22.1 bits (42), Expect(2) = 1.7
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1 / +1
Query: 649 RLITAVQLPPSAPREPQGPATSTHQALVLWGT*APSSARRLNHQC*CP 792
RL Q+PP R HQAL + G RRL H+ P
Sbjct: 226 RLWRQRQVPPRPLRPRPVLRRRRHQALPVQGRPRLPLHRRLRHRLLAP 369
>gb|BE602473.2|BE602473 HVSMEh0099B10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099B10f, mRNA sequence
Length = 734
Score = 34.5 bits (69), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
K W+ EE+E L + KHG G W ++ K
Sbjct: 100 KQKWTSEEEEALRRGVLKHGAGKWRTIQK 186
>gb|BI947849.1|BI947849 HVSMEl0007D02f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0007D02f, mRNA sequence
Length = 597
Score = 34.5 bits (69), Expect = 2.1
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3 / +1
Query: 717 PSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELFLEQLT 875
P++T P+ + TA +++ PV+ +R TP+ P +PP + T
Sbjct: 214 PATTTPISPTHTTIPPTATTTVYPPVHTISRPTTPSATTPIIPPAPTIIPSAT 372
>gb|BG366008.2|BG366008 HVSMEi0004M21f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004M21f, mRNA sequence
Length = 949
Score = 34.5 bits (69), Expect = 2.1
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 536 CNLRPPVPEDSVQLDDEV 483
C +RPPVP+ SV LDD+V
Sbjct: 185 CRVRPPVPQGSVGLDDDV 132
>gb|BG369593.2|BG369593 HVSMEi0025C01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025C01f, mRNA sequence
Length = 691
Score = 34.5 bits (69), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
K W+ EE+E L + KHG G W ++ K
Sbjct: 99 KQKWTSEEEEALRRGVLKHGAGKWRTIQK 185
>gb|BM099949.2|BM099949 EBes01_SQ004_L19_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_L19 5', mRNA sequence
Length = 406
Score = 34.5 bits (69), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
K W+ EE+E L + KHG G W ++ K
Sbjct: 27 KQKWTSEEEEALRRGVLKHGAGKWRTIQK 113
>gb|BQ768242.1|BQ768242 EBro08_SQ011_L02_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_L02 5', mRNA sequence
Length = 444
Score = 34.5 bits (69), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
K W+ EE+E L + KHG G W ++ K
Sbjct: 65 KQKWTSEEEEALRRGVLKHGAGKWRTIQK 151
>gb|BU997102.1|BU997102 HI06O17r HI Hordeum vulgare subsp. vulgare cDNA clone HI06O17
5-PRIME, mRNA sequence
Length = 439
Score = 34.5 bits (69), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +2
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
K W+ EE+E L + KHG G W ++ K
Sbjct: 38 KQKWTSEEEEALRRGVLKHGAGKWRTIQK 124
>gb|BU997979.1|BU997979 HI09J14r HI Hordeum vulgare subsp. vulgare cDNA clone HI09J14
5-PRIME, mRNA sequence
Length = 483
Score = 34.5 bits (69), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +3
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
K W+ EE+E L + KHG G W ++ K
Sbjct: 51 KQKWTSEEEEALRRGVLKHGAGKWRTIQK 137
>gb|BU998579.1|BU998579 HI11I02r HI Hordeum vulgare subsp. vulgare cDNA clone HI11I02
5-PRIME, mRNA sequence
Length = 626
Score = 34.5 bits (69), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3 / +1
Query: 297 KGLWSPEEDEKLMNHITKHGHGCWSSVPK 383
K W+ EE+E L + KHG G W ++ K
Sbjct: 94 KQKWTSEEEEALRRGVLKHGAGKWRTIQK 180
>gb|CA032005.1|CA032005 HX11L19r HX Hordeum vulgare subsp. vulgare cDNA clone HX11L19
5-PRIME, mRNA sequence
Length = 641
Score = 34.5 bits (69), Expect = 2.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3 / +2
Query: 1138 LLPMPVPPCRGLSGGRFSPIDVERADGETG 1049
L P P PPCRG + RF ADG +G
Sbjct: 44 LSPPPPPPCRGGAAARFLCCSAAAADGSSG 133
>gb|CV058397.1|CV058397 BNEL37f11 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL37f11 5' similar to putative
I-box binding factor, mRNA sequence
Length = 566
Score = 34.5 bits (69), Expect = 2.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3 / +2
Query: 480 EDLIIELHAVLGNRWSQIAAQLPGRTDNE 566
E ++ + + NRW+ +AAQLPGRT E
Sbjct: 185 ESALVAVPEHVPNRWAFVAAQLPGRTPQE 271
>gb|BG366605.1|BG366605 HVSMEi0007J17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0007J17f, mRNA sequence
Length = 480
Score = 26.7 bits (52), Expect(2) = 2.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 607 GRKALIPTPTSHLL 648
GRKA IP PT H L
Sbjct: 252 GRKAAIPLPTKHCL 293
Score = 24.9 bits (48), Expect(2) = 2.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 655 ITAVQLPPSAPREPQGPATSTHQ 723
+T V PPS+P + + S HQ
Sbjct: 386 LTRVSKPPSSPHQGKQTTVSPHQ 454
>gb|BQ467955.1|BQ467955 HR01H09r HR Hordeum vulgare subsp. vulgare cDNA clone HR01H09
5-PRIME, mRNA sequence
Length = 186
Score = 34.1 bits (68), Expect = 2.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2 / -1
Query: 602 LLLDARVP*ILDLIISPPWQLRCNLRPP 519
LLL R+ +L + PPW+ C+ RPP
Sbjct: 162 LLLGERIHGLLXATLPPPWRCACSCRPP 79
>gb|BU975460.1|BU975460 HB31D06r BC Hordeum vulgare subsp. vulgare cDNA clone HB31D06
5-PRIME, mRNA sequence
Length = 625
Score = 34.1 bits (68), Expect = 2.8
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +3 / +2
Query: 675 TISTERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKE 854
T +T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 5 TRTTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAP 184
Query: 855 LFLEQLT 875
+ T
Sbjct: 185 AIIPSAT 205
>gb|BI950484.1|BI950484 HVSMEl0020O13f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0020O13f, mRNA sequence
Length = 469
Score = 30.4 bits (60), Expect(2) = 2.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2 / -2
Query: 1625 FSIILPTNL*KYEFLLLLICSVPCGGT*CL 1536
FS+ILP NL + L I S PC *C+
Sbjct: 360 FSVILPGNLQPLPWYTLYILSCPCFSC*CV 271
Score = 24.0 bits (46), Expect(2) = 2.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1 / -3
Query: 327 SHPPQGTRAPFSASACSSKNASPSQRNAEPGSSNQTHRAYRSAECIIMH 181
S PP+ + ASA +S + S S +A P S+ T A S M+
Sbjct: 230 SPPPRPCWSSLPASASTSTSTSISPSDAPPS*SSTTCPAAASRTLAAMN 84
>gb|BI776784.2|BI776784 EBpi07_SQ001_L22_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_L22 5', mRNA sequence
Length = 469
Score = 27.6 bits (54), Expect(2) = 2.9
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1 / +3
Query: 225 QTHRAYRSAECIIMHDDEHLLR*HRASST 139
+ HR +R +++H+D+ L+R R ST
Sbjct: 324 RAHRNHRLLRLLLVHEDDLLIREDRLKST 410
Score = 26.7 bits (52), Expect(2) = 2.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3 / +1
Query: 1051 GGITVEIVLQLKSLWLNQSEFIF 983
G + +E+ L S+WL+Q +IF
Sbjct: 7 GAVFIELFFILTSIWLHQFYYIF 75
>gb|BF264568.1|BF264568 HV_CEa0009M12f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009M12f, mRNA sequence
Length = 847
Score = 26.7 bits (52), Expect(2) = 3.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1 / -3
Query: 670 LPPSAPREPQGPATSTHQA 726
LPP+APR P P+ H A
Sbjct: 680 LPPAAPRLPGPPSPPAHAA 624
Score = 24.4 bits (47), Expect(2) = 3.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1 / -1
Query: 586 RASRRS*GRKALIPTPTSHLLRLITAVQLPPSAPR 690
R +R + +A +P P L L ++ PPS PR
Sbjct: 796 RLTRPTPPPRAPLPLPLPSTLSLPPPMRTPPSPPR 692
>gb|BU996814.1|BU996814 HM14N14r HM Hordeum vulgare subsp. vulgare cDNA clone HM14N14
5-PRIME, mRNA sequence
Length = 431
Score = 27.2 bits (53), Expect(2) = 3.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1 / +3
Query: 622 IPTPTSHLLRLITAVQLPPSAPREPQGPATS 714
+ T RL ++ LPP APR GP S
Sbjct: 156 VSTSIRRFYRLASSPLLPPPAPRRLPGPLLS 248
Score = 24.0 bits (46), Expect(2) = 3.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2 / +1
Query: 707 RHQPIKHWSSGELEPPPQR 763
R P W+ L PPPQ+
Sbjct: 286 RQPPPHRWTPRSLPPPPQQ 342
>gb|BF621935.2|BF621935 HVSMEa0001F07f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0001F07f, mRNA sequence
Length = 606
Score = 30.4 bits (60), Expect(2) = 3.7
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2 / -3
Query: 1625 FSIILPTNL*KYEFLLLLICSVPCGGT*CL 1536
FS+ILP NL + L I S PC *C+
Sbjct: 451 FSVILPGNLQPLPWYTLYILSCPCFSC*CV 362
Score = 24.0 bits (46), Expect(2) = 3.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1 / -1
Query: 327 SHPPQGTRAPFSASACSSKNASPSQRNAEPGSSNQTHRAYRSAECIIMH 181
S PP+ + ASA +S + S S +A P S+ T A S M+
Sbjct: 321 SPPPRPCWSSLPASASTSTSTSISPSDAPPS*SSTTCPAAASRTLAAMN 175
>gb|BQ460001.1|BQ460001 HA07H16r HA Hordeum vulgare subsp. vulgare cDNA clone HA07H16
5-PRIME, mRNA sequence
Length = 618
Score = 27.6 bits (54), Expect(2) = 3.7
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1 / +1
Query: 225 QTHRAYRSAECIIMHDDEHLLR*HRASST 139
+ HR +R +++H+D+ L+R R ST
Sbjct: 421 RAHRNHRLLRLLLVHEDDLLIREDRLEST 507
Score = 26.7 bits (52), Expect(2) = 3.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3 / +2
Query: 1051 GGITVEIVLQLKSLWLNQSEFIF 983
G + +E+ L S+WL+Q +IF
Sbjct: 104 GAVFIELFFILTSIWLHQFYYIF 172
>gb|BI947101.1|BI947101 HVSMEl0003K22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0003K22f, mRNA sequence
Length = 1101
Score = 33.6 bits (67), Expect = 3.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2 / -3
Query: 488 EVFFVLGECPSLEVWPQIVYPPQPTTLSAPL 396
+ FF+ S +W + PP PT L+APL
Sbjct: 430 QTFFLCAPSSSTHLWADLFLPPCPTLLNAPL 338
>gb|BI950149.1|BI950149 HVSMEl0019A16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0019A16f, mRNA sequence
Length = 569
Score = 33.6 bits (67), Expect = 3.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 399 RCGKSCRLRWINYLRPDLK 455
R GK CR RW N++RP +K
Sbjct: 160 RIGKHCRERWTNHVRPGIK 216
>gb|BQ471743.1|BQ471743 HV03F11r HV Hordeum vulgare subsp. vulgare cDNA clone HV03F11
5-PRIME, mRNA sequence
Length = 451
Score = 33.6 bits (67), Expect = 3.9
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -2 / -1
Query: 434 VYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
++ P T +AP P+ A A+ L I F ++ P P S + PP L
Sbjct: 229 IWAPPRITAAAPPSPASISTNATHAVPGLTSTIEFFPVIAHSPPPSSASTTLGTEYPPRL 50
>gb|BQ472163.1|BQ472163 HV04J12r HV Hordeum vulgare subsp. vulgare cDNA clone HV04J12
5-PRIME, mRNA sequence
Length = 450
Score = 33.6 bits (67), Expect = 3.9
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -2 / -1
Query: 434 VYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
++ P T +AP P+ A A+ L I F ++ P P S + PP L
Sbjct: 228 IWAPPRITAAAPPSPASISTNATHAVPGLTSTIEFFPVIAHSPPPSSASTTLGTEYPPRL 49
>gb|BQ664728.1|BQ664728 HV04J12u HV Hordeum vulgare subsp. vulgare cDNA clone HV04J12
3-PRIME, mRNA sequence
Length = 451
Score = 33.6 bits (67), Expect = 3.9
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -2 / +1
Query: 434 VYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
++ P T +AP P+ A A+ L I F ++ P P S + PP L
Sbjct: 223 IWAPPRITAAAPPSPASISTNATHAVPGLTSTIEFFPVIAHSPPPSSASTTLGTEYPPRL 402
>gb|BU984349.1|BU984349 HF03K24r HF Hordeum vulgare subsp. vulgare cDNA clone HF03K24
5-PRIME, mRNA sequence
Length = 547
Score = 33.6 bits (67), Expect = 3.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3 / +3
Query: 294 RKGLWSPEEDEKLMNHITKHG 356
RKG W+PEED LM +I ++G
Sbjct: 447 RKGPWTPEEDLALMQYIERNG 509
>gb|CA000073.1|CA000073 HS16E01u HS Hordeum vulgare subsp. vulgare cDNA clone HS16E01
3-PRIME, mRNA sequence
Length = 470
Score = 33.6 bits (67), Expect = 3.9
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -2 / +1
Query: 434 VYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
++ P T +AP P+ A A+ L I F ++ P P S + PP L
Sbjct: 223 IWAPPRITAAAPPSPASISTNATHAVPGLTSTIEFFPVIAHSPPPSSASTTLGTEYPPRL 402
>gb|CA004002.1|CA004002 HS16E01r HS Hordeum vulgare subsp. vulgare cDNA clone HS16E01
5-PRIME, mRNA sequence
Length = 470
Score = 33.6 bits (67), Expect = 3.9
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -2 / -1
Query: 434 VYPPQPTTLSAPLKPSEFGNRAPAAMAMLCYVIHEFLILLRGPEPLSQLLLVAARMPPHL 255
++ P T +AP P+ A A+ L I F ++ P P S + PP L
Sbjct: 248 IWAPPRITAAAPPSPASISTNATHAVPGLTSTIEFFPVIAHSPPPSSASTTLGTEYPPRL 69
>gb|CB877683.1|CB877683 HP05N03T HP Hordeum vulgare subsp. vulgare cDNA clone HP05N03
5-PRIME, mRNA sequence
Length = 635
Score = 33.6 bits (67), Expect = 3.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -1 / +3
Query: 321 PPQGTRAPFSASACSSKNASPSQRNAEPGSSNQT 220
PP G+R+P S S SS ++ P++R+ GSS +
Sbjct: 57 PPTGSRSPCSCSCHSSCSSEPARRSRTWGSSTSS 158
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
sequence; splicing factor SF2-like protein (SF2) and
universal stress protein (USP1) genes and Hv
receptor-kinase-like pseudogene, complete cds; and
retrotransposons Sandra6 and Sandra7, complete sequence
Length = 82293
Score = 33.6 bits (67), Expect = 3.9
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3 / -3
Query: 637 LWVLGSMPFCLSFFLM 590
LW +GS+PFC+ FFL+
Sbjct: 55729 LWPIGSLPFCVGFFLV 55682
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H
Length = 59748
Score = 31.3 bits (62), Expect(2) = 4.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1 / +1
Query: 766 RLNHQC*CPCTTRIVLKHQTWHALSCHQRSCSW 864
R++ +C C T ++ Q +L C SC+W
Sbjct: 51355 RVSTECGCQATLKVRQARQVGQSLLCEANSCTW 51453
Score = 29.0 bits (57), Expect(2) = 4.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1 / +3
Query: 607 GRKALIPTPTSHLLRLITAVQLPPSAPREPQGPAT 711
GR+ +P H+ L+ + PP PR Q P+T
Sbjct: 20784 GRRTHFFSPICHMFFLLYLLAHPPWKPRSNQSPST 20888
>gb|BG309945.2|BG309945 HVSMEc0015F14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0015F14f, mRNA sequence
Length = 805
Score = 31.8 bits (63), Expect(2) = 4.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1 / -3
Query: 622 IPTPTSHLLRLITAVQLPPSAPREPQGPATSTH 720
+PTP H L L L P +PR P P H
Sbjct: 605 VPTPPHHSLSLHRHTALSPPSPRSPPSPP*GPH 507
Score = 22.6 bits (43), Expect(2) = 4.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3 / -2
Query: 873 TAGHESPSTCHSSGQTLY 926
+ GH SP+TC + L+
Sbjct: 81 SGGHASPATCWTKDAILF 28
>gb|AV915847.1|AV915847 AV915847 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16d24 5', mRNA sequence
Length = 625
Score = 28.6 bits (56), Expect(2) = 5.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3 / -1
Query: 351 HGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGA 464
HG GC SS P L G++ L W L ++ A
Sbjct: 385 HGDGCTSSAPPLTAWHFHGRTGALPWSLMLDRQMRENA 272
Score = 25.4 bits (49), Expect(2) = 5.1
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3 / -1
Query: 690 RTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPN 824
R+SG +P+ P LS + SET M P+ + TPN
Sbjct: 169 RSSGCPPTSPAILRP*RTLSKITSETVMFRMNPPLPELVLM*TPN 35
>gb|BE601924.1|BE601924 HVSMEh0100D02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100D02f, mRNA sequence
Length = 725
Score = 33.1 bits (66), Expect = 5.3
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +3 / +2
Query: 675 TISTERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKE 854
T +T +S + + P++T P+ + TA +++ PV R TP+ P +PP
Sbjct: 239 TTTTAISSIPATMPPATTTPISPTHTTIPPTATTTVYPPVPTIPRPTTPSATTPIIPPAP 418
Query: 855 LFLEQLT 875
+ T
Sbjct: 419 TIIPSAT 439
>gb|BE602834.1|BE602834 HVSMEh0101O24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0101O24f, mRNA sequence
Length = 995
Score = 33.1 bits (66), Expect = 5.3
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +3 / +3
Query: 675 TISTERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKE 854
T +T +S + + P++T P+ + TA +++ PV R TP+ P +PP
Sbjct: 474 TTTTTISSIPATMPPATTTPISPTHTTIPPTATTTVYPPVPTIPRPTTPSATTPIIPPAP 653
Query: 855 LFLEQLT 875
+ T
Sbjct: 654 TIIPSTT 674
>gb|BE454375.2|BE454375 HVSMEh0093O04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093O04f, mRNA sequence
Length = 914
Score = 33.1 bits (66), Expect = 5.3
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3 / +3
Query: 669 APTISTERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPP 848
A +T +S + + P++T P+ ++ TA +++ PV R TP+ P +PP
Sbjct: 243 ASATTTAISSIPATMPPATTTPISPTHTTIAPTATTTVYPPVPTIPRPTTPSATTPIIPP 422
Query: 849 KELFLEQLT 875
+ T
Sbjct: 423 APTIIPSAT 449
>gb|BI950540.1|BI950540 HVSMEl0021D24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0021D24f, mRNA sequence
Length = 847
Score = 33.1 bits (66), Expect = 5.3
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S + + P++T P G + TA +++ PV R TP+ P +PP
Sbjct: 99 TTAISSIPATMPPATTTPRGGAHTTIPPTATTTVYPPVPTIPRPTTPSATTPIIPPAPTI 278
Query: 861 LEQLT 875
+ T
Sbjct: 279 IPSAT 293
>gb|BF267775.2|BF267775 HV_CEa0018N18f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018N18f, mRNA sequence
Length = 817
Score = 33.1 bits (66), Expect = 5.3
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1 / +3
Query: 321 PPQGTRAPFSASACSSKNASPSQRNAEPGSSNQTHR 214
PP G+R+P S S S ++ P++R+ GSS + R
Sbjct: 651 PPTGSRSPCSCSCHXSCSSEPAKRSRTWGSSTSSAR 758
>gb|BG366404.2|BG366404 HVSMEi0006O23f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006O23f, mRNA sequence
Length = 558
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3 / +2
Query: 705 SDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELFLEQLT 875
S + PS+T P+ + TA +++ PV R TP+ P +PP + T
Sbjct: 8 STMPPSTTTPISPTHTTIPPTATTTVYPPVPTIPRPTTPSATTPIIPPAPTIIPSAT 178
>gb|BF262206.3|BF262206 HV_CEa0003J19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0003J19f, mRNA sequence
Length = 626
Score = 33.1 bits (66), Expect = 5.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3 / +3
Query: 399 RCGKSCRLRWINYLRPDLKRGAFAQDEEDLIIELHAVLGNRWSQIAAQL 545
R C RW N L PD+ G + +E+ + +G WS+IA +
Sbjct: 18 RTQSQCGERWRNVLDPDIDHGEWRPEEDSNPLASVHEVGPCWSKIAGAM 164
>gb|BF264429.3|BF264429 HV_CEa0009G11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009G11f, mRNA sequence
Length = 802
Score = 33.1 bits (66), Expect = 5.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3 / +1
Query: 354 GHGCWSSVPKLAGLQRCGKSCRLRW 428
G GC+ S P Q C SC LRW
Sbjct: 253 GKGCYCSAPTCCSQQHCVFSCWLRW 327
>gb|AV923046.1|AV923046 AV923046 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3i06 5', mRNA sequence
Length = 604
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2 / -2
Query: 458 SLEVWPQIVYPPQPTTLSAPLKPSEFGNRAPAAMAMLC 345
SL P I P T L+ PLKP + PAA LC
Sbjct: 429 SLSCIPTIPLPKNSTELACPLKPFPCRDELPAAPTCLC 316
>gb|BQ464019.1|BQ464019 HF01B24T HF Hordeum vulgare subsp. vulgare cDNA clone HF01B24
5-PRIME, mRNA sequence
Length = 669
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +2
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 137 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 316
Query: 861 LEQLT 875
+ T
Sbjct: 317 IPSAT 331
>gb|BQ464299.1|BQ464299 HF01O07T HF Hordeum vulgare subsp. vulgare cDNA clone HF01O07
5-PRIME, mRNA sequence
Length = 634
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 234 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 413
Query: 861 LEQLT 875
+ T
Sbjct: 414 IPSAT 428
>gb|BQ464644.1|BQ464644 HF02N17r HF Hordeum vulgare subsp. vulgare cDNA clone HF02N17
5-PRIME, mRNA sequence
Length = 564
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 226 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 405
Query: 861 LEQLT 875
+ T
Sbjct: 406 IPSAT 420
>gb|BQ472360.1|BQ472360 HB09N06T BC Hordeum vulgare subsp. vulgare cDNA clone HB09N06
5-PRIME, mRNA sequence
Length = 699
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 240 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 419
Query: 861 LEQLT 875
+ T
Sbjct: 420 IPSAT 434
>gb|BQ472408.1|BQ472408 HB09L05T BC Hordeum vulgare subsp. vulgare cDNA clone HB09L05
5-PRIME, mRNA sequence
Length = 700
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 240 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 419
Query: 861 LEQLT 875
+ T
Sbjct: 420 IPSAT 434
>gb|BQ472504.1|BQ472504 HB09F21T BC Hordeum vulgare subsp. vulgare cDNA clone HB09F21
5-PRIME, mRNA sequence
Length = 666
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 241 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 420
Query: 861 LEQLT 875
+ T
Sbjct: 421 IPSAT 435
>gb|BQ472538.1|BQ472538 HB09E09T BC Hordeum vulgare subsp. vulgare cDNA clone HB09E09
5-PRIME, mRNA sequence
Length = 622
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 219 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 398
Query: 861 LEQLT 875
+ T
Sbjct: 399 IPSAT 413
>gb|BQ472746.1|BQ472746 HB01J22r BC Hordeum vulgare subsp. vulgare cDNA clone HB01J22
5-PRIME, mRNA sequence
Length = 511
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 211 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 390
Query: 861 LEQLT 875
+ T
Sbjct: 391 IPSAT 405
>gb|BQ472750.1|BQ472750 HB01J13r BC Hordeum vulgare subsp. vulgare cDNA clone HB01J13
5-PRIME, mRNA sequence
Length = 470
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 226 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 405
Query: 861 LEQLT 875
+ T
Sbjct: 406 IPSAT 420
>gb|BQ472760.1|BQ472760 HB01I22r BC Hordeum vulgare subsp. vulgare cDNA clone HB01I22
5-PRIME, mRNA sequence
Length = 557
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 211 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 390
Query: 861 LEQLT 875
+ T
Sbjct: 391 IPSAT 405
>gb|BQ472821.1|BQ472821 HB01G02r BC Hordeum vulgare subsp. vulgare cDNA clone HB01G02
5-PRIME, mRNA sequence
Length = 603
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 232 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 411
Query: 861 LEQLT 875
+ T
Sbjct: 412 IPSAT 426
>gb|BU966671.1|BU966671 HB02A04r BC Hordeum vulgare subsp. vulgare cDNA clone HB02A04
5-PRIME, mRNA sequence
Length = 513
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 234 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 413
Query: 861 LEQLT 875
+ T
Sbjct: 414 IPSAT 428
>gb|BU967359.1|BU967359 HB04B01r BC Hordeum vulgare subsp. vulgare cDNA clone HB04B01
5-PRIME, mRNA sequence
Length = 454
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 249 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 428
Query: 861 LEQLT 875
+ T
Sbjct: 429 IPSAT 443
>gb|BU967411.1|BU967411 HB04D16r BC Hordeum vulgare subsp. vulgare cDNA clone HB04D16
5-PRIME, mRNA sequence
Length = 249
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +2
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 32 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 211
Query: 861 LEQLT 875
+ T
Sbjct: 212 IPSAT 226
>gb|BU968078.1|BU968078 HB06F18r BC Hordeum vulgare subsp. vulgare cDNA clone HB06F18
5-PRIME, mRNA sequence
Length = 454
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 235 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 414
Query: 861 LEQLT 875
+ T
Sbjct: 415 IPSAT 429
>gb|BU968164.1|BU968164 HB06K05r BC Hordeum vulgare subsp. vulgare cDNA clone HB06K05
5-PRIME, mRNA sequence
Length = 444
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 226 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 405
Query: 861 LEQLT 875
+ T
Sbjct: 406 IPSAT 420
>gb|BU968280.1|BU968280 HB07A11r BC Hordeum vulgare subsp. vulgare cDNA clone HB07A11
5-PRIME, mRNA sequence
Length = 700
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +2
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 221 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 400
Query: 861 LEQLT 875
+ T
Sbjct: 401 IPSAT 415
>gb|BU968358.1|BU968358 HB07E09r BC Hordeum vulgare subsp. vulgare cDNA clone HB07E09
5-PRIME, mRNA sequence
Length = 574
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +2
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 221 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 400
Query: 861 LEQLT 875
+ T
Sbjct: 401 IPSAT 415
>gb|BU968390.1|BU968390 HB07F21r BC Hordeum vulgare subsp. vulgare cDNA clone HB07F21
5-PRIME, mRNA sequence
Length = 544
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 240 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 419
Query: 861 LEQLT 875
+ T
Sbjct: 420 IPSAT 434
>gb|BU968493.1|BU968493 HB07L05r BC Hordeum vulgare subsp. vulgare cDNA clone HB07L05
5-PRIME, mRNA sequence
Length = 700
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 240 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 419
Query: 861 LEQLT 875
+ T
Sbjct: 420 IPSAT 434
>gb|BU968534.1|BU968534 HB07N06r BC Hordeum vulgare subsp. vulgare cDNA clone HB07N06
5-PRIME, mRNA sequence
Length = 615
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 240 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 419
Query: 861 LEQLT 875
+ T
Sbjct: 420 IPSAT 434
>gb|BU968706.1|BU968706 HB08F12r BC Hordeum vulgare subsp. vulgare cDNA clone HB08F12
5-PRIME, mRNA sequence
Length = 700
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 226 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 405
Query: 861 LEQLT 875
+ T
Sbjct: 406 IPSAT 420
>gb|BU968767.1|BU968767 HB08I08r BC Hordeum vulgare subsp. vulgare cDNA clone HB08I08
5-PRIME, mRNA sequence
Length = 614
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +1
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 127 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 306
Query: 861 LEQLT 875
+ T
Sbjct: 307 IPSAT 321
>gb|BU968773.1|BU968773 HB08I17r BC Hordeum vulgare subsp. vulgare cDNA clone HB08I17
5-PRIME, mRNA sequence
Length = 700
Score = 33.1 bits (66), Expect = 5.3
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +3 / +3
Query: 681 STERTSGSSDINPSSTGPLGNLSPLLSETAQSSMLMPVYDKNRAETPNLARPKLPPKELF 860
+T +S ++ + P++T P+ + TA +++ PV + R TP+ P +PP
Sbjct: 231 TTAISSIAAAMPPATTTPISPTHTTIPPTATTTIYSPVPNIPRPTTPSATTPIIPPAPAI 410
Query: 861 LEQLT 875
+ T
Sbjct: 411 IPSAT 425
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,001,899,379
Number of Sequences: 312970
Number of extensions: 17054524
Number of successful extensions: 96344
Number of sequences better than 10.0: 447
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 25259979591
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)