TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MAD56_a5f4.3.2
(1520 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI956944.1|BI956944 HVSMEn0006E12f Hordeum vulgare rachi... 196 5e-072
gb|BF261108.2|BF261108 HVSMEf0023M12f Hordeum vulgare seedl... 195 1e-066
gb|BQ462871.1|BQ462871 HI02E11r HI Hordeum vulgare subsp. v... 169 1e-065
gb|BI959830.1|BI959830 HVSMEn0021N12f Hordeum vulgare rachi... 188 2e-063
gb|CA023872.1|CA023872 HZ47K17r HZ Hordeum vulgare subsp. v... 196 4e-062
gb|BQ764973.1|BQ764973 EBca01_SQ005_M11_R carpel, pre-anthe... 191 1e-060
gb|BI959444.1|BI959444 HVSMEn0019L05f Hordeum vulgare rachi... 189 2e-056
gb|BJ463222.1|BJ463222 BJ463222 K. Sato unpublished cDNA li... 176 2e-056
gb|CA020504.1|CA020504 HZ36I05r HZ Hordeum vulgare subsp. v... 88 3e-055
gb|CA024879.1|CA024879 HZ50J05r HZ Hordeum vulgare subsp. v... 88 7e-054
gb|BM816773.1|BM816773 HC02H07_T3.ab1 HC Hordeum vulgare su... 165 6e-053
gb|CA027046.1|CA027046 HZ57L22r HZ Hordeum vulgare subsp. v... 182 1e-052
gb|BG344189.2|BG344189 HVSMEg0008A10f Hordeum vulgare pre-a... 183 6e-052
gb|CA018242.1|CA018242 HV08A20r HV Hordeum vulgare subsp. v... 95 2e-050
gb|CA029175.1|CA029175 HZ64G24r HZ Hordeum vulgare subsp. v... 197 1e-049
gb|BF621492.1|BF621492 HVSMEa0011C21f Hordeum vulgare seedl... 83 2e-049
gb|CA023590.1|CA023590 HZ46L21r HZ Hordeum vulgare subsp. v... 150 4e-049
gb|AL505426.1|AL505426 AL505426 Hordeum vulgare Barke roots... 88 2e-048
gb|BI959188.1|BI959188 HVSMEn0018I19f Hordeum vulgare rachi... 149 3e-048
gb|BI957037.1|BI957037 HVSMEn0007B14f Hordeum vulgare rachi... 88 1e-047
gb|BI956693.1|BI956693 HVSMEn0004M24f Hordeum vulgare rachi... 172 1e-047
gb|BQ754289.1|BQ754289 EBca01_SQ003_H09_R carpel, pre-anthe... 143 2e-046
gb|BG300532.2|BG300532 HVSMEb0017G05f Hordeum vulgare seedl... 88 3e-046
gb|BI957027.1|BI957027 HVSMEn0007B02f Hordeum vulgare rachi... 86 5e-045
gb|BQ764714.1|BQ764714 EBca01_SQ004_N14_R carpel, pre-anthe... 88 3e-044
gb|CA020509.1|CA020509 HZ36I10r HZ Hordeum vulgare subsp. v... 88 9e-044
gb|BM376151.2|BM376151 EBma01_SQ002_I03_R maternal, 4 DPA, ... 134 9e-044
gb|BF629361.2|BF629361 HVSMEb0010P14f Hordeum vulgare seedl... 89 3e-043
gb|BI958741.1|BI958741 HVSMEn0016G17f Hordeum vulgare rachi... 175 5e-043
gb|CA028294.1|CA028294 HZ61I24r HZ Hordeum vulgare subsp. v... 88 6e-043
gb|BU998577.1|BU998577 HI11H24r HI Hordeum vulgare subsp. v... 88 6e-043
gb|BI781057.2|BI781057 EBma03_SQ001_E15_R maternal, 8 DPA, ... 131 8e-043
gb|BQ739796.1|BQ739796 HB03B08 HB Hordeum vulgare subsp. vu... 88 1e-042
gb|BQ739930.1|BQ739930 HB05C05 HB Hordeum vulgare subsp. vu... 88 1e-042
gb|BM370467.2|BM370467 EBro08_SQ004_F03_R root, 3 week, dro... 88 5e-042
gb|BQ766550.1|BQ766550 EBro08_SQ006_M08_R root, 3 week, dro... 88 7e-042
gb|AV910070.1|AV910070 AV910070 K. Sato unpublished cDNA li... 127 1e-041
gb|BM440810.2|BM440810 EBca01_SQ001_A23_R carpel, pre-anthe... 170 2e-041
gb|BF256101.2|BF256101 HVSMEf0008L23f Hordeum vulgare seedl... 91 6e-041
gb|BI958385.1|BI958385 HVSMEn0014L20f Hordeum vulgare rachi... 88 2e-040
gb|CB882801.1|CB882801 HL02O03w HL Hordeum vulgare subsp. v... 88 3e-040
gb|BQ764738.1|BQ764738 EBca01_SQ004_C20_R carpel, pre-anthe... 88 2e-039
gb|BI959431.1|BI959431 HVSMEn0019K08f Hordeum vulgare rachi... 88 2e-039
gb|CA023438.1|CA023438 HZ46D23r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA024073.1|CA024073 HZ48E15r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA027921.1|CA027921 HZ60H05r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA025719.1|CA025719 HZ52P07r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA026295.1|CA026295 HZ55H24r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA022610.1|CA022610 HZ43N05r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA025724.1|CA025724 HZ52P12r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA022792.1|CA022792 HZ44F22r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA023210.1|CA023210 HZ45I24r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA027542.1|CA027542 HZ59E05r HZ Hordeum vulgare subsp. v... 84 3e-039
gb|CA026017.1|CA026017 HZ53N15r HZ Hordeum vulgare subsp. v... 84 4e-039
gb|BI778132.2|BI778132 EBro07_SQ002_F03_R root, 3 week, red... 78 8e-039
gb|BG309310.1|BG309310 HVSMEc0007H06f Hordeum vulgare seedl... 85 8e-039
gb|CA026009.1|CA026009 HZ53N03r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|CA027661.1|CA027661 HZ59K04r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|CA022589.1|CA022589 HZ43L15r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|BQ469563.1|BQ469563 HZ01C22r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|CA022592.1|CA022592 HZ43L18r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|CA024079.1|CA024079 HZ48E21r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|CA028299.1|CA028299 HZ61J05r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|CA027797.1|CA027797 HZ60A24r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|BQ469691.1|BQ469691 HZ01J07r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|CA028950.1|CA028950 HZ63L15r HZ Hordeum vulgare subsp. v... 84 3e-038
gb|CA029655.1|CA029655 HZ65N07r HZ Hordeum vulgare subsp. v... 88 4e-038
gb|AL507081.1|AL507081 AL507081 Hordeum vulgare Barke devel... 88 5e-038
gb|CB883088.1|CB883088 HQ01C16w HQ Hordeum vulgare subsp. v... 88 5e-038
gb|CA022924.1|CA022924 HZ44L21r HZ Hordeum vulgare subsp. v... 88 5e-038
gb|CA028102.1|CA028102 HZ61A02r HZ Hordeum vulgare subsp. v... 88 5e-038
gb|CA019961.1|CA019961 HV13O21r HV Hordeum vulgare subsp. v... 84 5e-038
gb|BI954469.1|BI954469 HVSMEm0018B19f Hordeum vulgare green... 109 1e-037
gb|AL503448.1|AL503448 AL503448 Hordeum vulgare Barke roots... 88 1e-037
gb|BF255336.2|BF255336 HVSMEf0006J09f Hordeum vulgare seedl... 88 2e-037
gb|AL504492.1|AL504492 AL504492 Hordeum vulgare Barke roots... 88 3e-037
gb|BQ462985.1|BQ462985 HI02K13r HI Hordeum vulgare subsp. v... 88 1e-036
gb|CA027438.1|CA027438 HZ58O20r HZ Hordeum vulgare subsp. v... 88 2e-036
gb|BQ766448.1|BQ766448 EBro08_SQ006_G04_R root, 3 week, dro... 88 4e-036
gb|BQ471155.1|BQ471155 HV01D23T HV Hordeum vulgare subsp. v... 88 4e-036
gb|CA022132.1|CA022132 HZ42E03r HZ Hordeum vulgare subsp. v... 88 4e-036
gb|CA021345.1|CA021345 HZ39N05r HZ Hordeum vulgare subsp. v... 88 4e-036
gb|CA020452.1|CA020452 HZ36F18r HZ Hordeum vulgare subsp. v... 88 3e-035
gb|CA020490.1|CA020490 HZ36H14r HZ Hordeum vulgare subsp. v... 88 3e-035
gb|AL507965.1|AL507965 AL507965 Hordeum vulgare Barke devel... 84 5e-035
gb|BI959417.1|BI959417 HVSMEn0019J10f Hordeum vulgare rachi... 86 1e-034
gb|AL508652.1|AL508652 AL508652 Hordeum vulgare Barke devel... 88 2e-034
gb|BF628911.2|BF628911 HVSMEb0009C16f Hordeum vulgare seedl... 104 3e-034
gb|CA021424.1|CA021424 HZ40B03r HZ Hordeum vulgare subsp. v... 88 2e-033
gb|BU966826.1|BU966826 HB02H15r BC Hordeum vulgare subsp. v... 100 2e-033
gb|CA026066.1|CA026066 HZ53P19r HZ Hordeum vulgare subsp. v... 88 3e-033
gb|BM100272.2|BM100272 EBma01_SQ001_L07_R maternal, 4 DPA, ... 99 3e-033
gb|CA022707.1|CA022707 HZ44C04r HZ Hordeum vulgare subsp. v... 88 3e-032
gb|CA021207.1|CA021207 HZ39G22r HZ Hordeum vulgare subsp. v... 88 3e-032
gb|CA022223.1|CA022223 HZ42I04r HZ Hordeum vulgare subsp. v... 88 3e-032
gb|CA023679.1|CA023679 HZ47A18r HZ Hordeum vulgare subsp. v... 88 3e-032
gb|BM097048.2|BM097048 EBpi07_SQ002_D20_R pistil, 12 DPA, n... 88 3e-032
gb|CA022683.1|CA022683 HZ44B01r HZ Hordeum vulgare subsp. v... 88 3e-032
gb|CA025411.1|CA025411 HZ52B11r HZ Hordeum vulgare subsp. v... 88 3e-032
gb|CA024381.1|CA024381 HZ49C11r HZ Hordeum vulgare subsp. v... 88 3e-032
gb|BM097960.2|BM097960 EBpi03_SQ002_C14_R pistil, 4 DPA, no... 95 4e-032
gb|BQ463825.1|BQ463825 HG01I22r HG Hordeum vulgare subsp. v... 87 7e-032
gb|BQ462582.1|BQ462582 HI01F21T HI Hordeum vulgare subsp. v... 85 1e-031
gb|CA020459.1|CA020459 HZ36G02r HZ Hordeum vulgare subsp. v... 93 3e-031
gb|CA026887.1|CA026887 HZ57E03r HZ Hordeum vulgare subsp. v... 84 3e-031
gb|CA026761.1|CA026761 HZ56O04r HZ Hordeum vulgare subsp. v... 84 3e-031
gb|CA021987.1|CA021987 HZ41M21r HZ Hordeum vulgare subsp. v... 84 3e-031
gb|CA020797.1|CA020797 HZ37L23r HZ Hordeum vulgare subsp. v... 88 5e-031
gb|CA025002.1|CA025002 HZ50P01r HZ Hordeum vulgare subsp. v... 88 5e-031
gb|BF625454.3|BF625454 HVSMEa0009F04f Hordeum vulgare seedl... 78 6e-031
gb|CA021383.1|CA021383 HZ39P01r HZ Hordeum vulgare subsp. v... 91 6e-031
gb|BM816961.1|BM816961 HB107B07_SK.ab1 HB Hordeum vulgare s... 98 7e-031
gb|AL505906.1|AL505906 AL505906 Hordeum vulgare Barke roots... 87 1e-030
gb|AV912164.1|AV912164 AV912164 K. Sato unpublished cDNA li... 89 4e-030
gb|BM440875.2|BM440875 EBca01_SQ001_I19_R carpel, pre-anthe... 79 1e-029
gb|CA029415.1|CA029415 HZ65C10r HZ Hordeum vulgare subsp. v... 85 5e-029
gb|CA028550.1|CA028550 HZ62G08r HZ Hordeum vulgare subsp. v... 85 5e-029
gb|BJ460883.1|BJ460883 BJ460883 K. Sato unpublished cDNA li... 85 5e-029
gb|CA018513.1|CA018513 HV08N15r HV Hordeum vulgare subsp. v... 98 6e-029
gb|CA020975.1|CA020975 HZ38K13r HZ Hordeum vulgare subsp. v... 76 7e-029
gb|AV919904.1|AV919904 AV919904 K. Sato unpublished cDNA li... 84 1e-028
gb|BQ471480.1|BQ471480 HV02I23r HV Hordeum vulgare subsp. v... 93 3e-028
gb|BI956940.1|BI956940 HVSMEn0006D20f Hordeum vulgare rachi... 76 6e-028
gb|CA028044.1|CA028044 HZ60N05r HZ Hordeum vulgare subsp. v... 72 1e-027
gb|BG344085.2|BG344085 HVSMEg0007J20f Hordeum vulgare pre-a... 71 2e-027
gb|CA026482.1|CA026482 HZ56A16r HZ Hordeum vulgare subsp. v... 72 6e-027
gb|CA021346.1|CA021346 HZ39N06r HZ Hordeum vulgare subsp. v... 95 2e-026
gb|CA023929.1|CA023929 HZ47N15r HZ Hordeum vulgare subsp. v... 72 5e-026
gb|CA021917.1|CA021917 HZ41I16r HZ Hordeum vulgare subsp. v... 72 5e-026
gb|CA023402.1|CA023402 HZ46C07r HZ Hordeum vulgare subsp. v... 72 5e-026
gb|CA021919.1|CA021919 HZ41I19r HZ Hordeum vulgare subsp. v... 72 5e-026
gb|BJ458781.1|BJ458781 BJ458781 K. Sato unpublished cDNA li... 75 5e-026
gb|BQ659997.1|BQ659997 HG01I22u HG Hordeum vulgare subsp. v... 74 7e-026
gb|CA027249.1|CA027249 HZ58F08r HZ Hordeum vulgare subsp. v... 71 6e-025
gb|CA029368.1|CA029368 HZ65A05r HZ Hordeum vulgare subsp. v... 72 6e-025
gb|CA028905.1|CA028905 HZ63J12r HZ Hordeum vulgare subsp. v... 72 6e-025
gb|BE420845.1|BE420845 HWM003.B06 ITEC HWM Barley Leaf Libr... 111 2e-024
gb|CA024318.1|CA024318 HZ48P17r HZ Hordeum vulgare subsp. v... 70 2e-024
gb|BI956707.1|BI956707 HVSMEn0004O04f Hordeum vulgare rachi... 95 3e-024
gb|AV915466.1|AV915466 AV915466 K. Sato unpublished cDNA li... 53 4e-024
gb|AV920561.1|AV920561 AV920561 K. Sato unpublished cDNA li... 111 1e-023
gb|CA029285.1|CA029285 HZ64M06r HZ Hordeum vulgare subsp. v... 72 7e-023
gb|CA023461.1|CA023461 HZ46F04r HZ Hordeum vulgare subsp. v... 70 7e-023
gb|BQ664037.1|BQ664037 HV01D23w HV Hordeum vulgare subsp. v... 64 9e-023
gb|BQ760771.1|BQ760771 EBro03_SQ003_G20_R root, 3 week, wat... 73 5e-022
gb|AV917175.1|AV917175 AV917175 K. Sato unpublished cDNA li... 64 6e-022
gb|CA025431.1|CA025431 HZ52C10r HZ Hordeum vulgare subsp. v... 64 6e-022
gb|CA025671.1|CA025671 HZ52M14r HZ Hordeum vulgare subsp. v... 64 6e-022
gb|AV922270.1|AV922270 AV922270 K. Sato unpublished cDNA li... 64 3e-021
>gb|BI956944.1|BI956944 HVSMEn0006E12f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0006E12f,
mRNA sequence
Length = 857
Score = 196 bits (422), Expect(4) = 5e-072
Identities = 79/144 (54%), Positives = 101/144 (70%)
Frame = +3 / +3
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG C
Sbjct: 249 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGEC 428
Query: 897 NDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRAC 1076
N ANS+AQ FN LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V AC
Sbjct: 429 NQQANSLAQAFNGLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTAC 608
Query: 1077 CGSGKLNAAVMCAQPNTTYCSDRD 1148
CGSGKLNA VMC+ P TT C D
Sbjct: 609 CGSGKLNAEVMCSHPGTTACPAAD 680
Score = 132 bits (283), Expect(4) = 5e-052
Identities = 67/122 (54%), Positives = 79/122 (64%)
Frame = -2 / -2
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 661 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 482
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VET 770
+LR L CA ELA LH PL M L PGV PI GTSRIP +RAP +A +C *V T
Sbjct: 481 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVT 302
Query: 769 ML 764
+L
Sbjct: 301 IL 296
Score = 88.6 bits (187), Expect(4) = 2e-032
Identities = 44/120 (36%), Positives = 66/120 (55%)
Frame = +2 / +2
Query: 770 GLNLCPAYRRVVQVGSTEVGDPRRASYRLYPRLQSPHGQRRMQRRCQLYGAELQQTPKAR 949
G +L A+ ++ GS GDPRRA+ R++ + H QRR+Q QL GA +Q+ P+ +
Sbjct: 302 GHHLHRAHPGALRHGSAHGGDPRRAADRVHAGAEGRHAQRRVQPAGQLPGAGVQRPPQGQ 481
Query: 950 GGESRRILHARHEILHCKHLQFCHRLDGQPSSGWAPGGRQGMLRIGKTERGGHVRPAKHD 1129
RR H ++L + LQ R DGQ + A G+LR+ + +RGG V+P HD
Sbjct: 482 ARRGRRRHHEGAQVLRRRQLQHPQRDDGQLARSRAEAREDGVLRLREAQRGGDVQPPGHD 661
Score = 83.1 bits (175), Expect(3) = 6e-022
Identities = 41/93 (44%), Positives = 47/93 (50%)
Frame = +1 / +1
Query: 757 TSVAWSQPMSSISTRCTSWEHGGWGS*TCQLSAVPQAPESPWPTADATTLPTLWRRTSTD 936
TS WS P SS S R T+WE WGS TC+ S + PTA AT+ PT WRR ST
Sbjct: 289 TSSRWSPPTSSTSRRSTTWERAWWGSSTCRRSGARRGRGPACPTASATSRPTPWRRRSTA 468
Query: 937 S*GSRWRKPSHPPCPA*DTPLQAPTILSPT*WT 1035
S +P PP + TP T S *WT
Sbjct: 469 SSRPSSPRPPPPP*RSSSTPSPPTTTSSTR*WT 567
Score = 60.6 bits (126), Expect(4) = 7e-022
Identities = 41/112 (36%), Positives = 48/112 (42%)
Frame = -3 / -3
Query: 1146 RDPNSKSCLAGRT*PPRSVFPIRSMPCRPPGAQPLDGCPSSR*QNCRCLQWSISCRAWRM 967
R + SC G T PPR RS P A+ CPSSR* C + S +W
Sbjct: 678 RRRGTPSCPGGCTSPPR*ASRSRSTPSSRASARLRASCPSSR*GCCSWRRRST*APSWWR 499
Query: 966 RRLSPPRALGVC*SSAP*SWQRRCIRRWPWGLWSLGYSR*LARLGSPTSVLP 811
RR G *+ AP SW C RRW + +R AR GSP LP
Sbjct: 498 RRPRRAWP*GGR*TPAPGSWPAGCTRRWACRPSAPACTRSAARRGSPPCALP 343
Score = 54.2 bits (112), Expect(4) = 5e-052
Identities = 29/58 (50%), Positives = 32/58 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLI 461
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 178 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLI 5
Score = 49.6 bits (102), Expect(4) = 5e-072
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIF 1217
+D D+YMFWDML PT A +RGVVA F
Sbjct: 675 ADHDEYMFWDMLXPTHANIQRGVVAFF 755
Score = 46.9 bits (96), Expect(4) = 5e-072
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +2
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 68 DWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEGGGQHDLLPKQ 196
Score = 43.7 bits (89), Expect(4) = 2e-032
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +1 / +1
Query: 520 AELVPITRLVDLAFSTPRETGHSRCKNKSRCSRK 621
A L P T VD A STPRE G SRC +KS SR+
Sbjct: 64 ARLAPTTLPVDPASSTPREKGRSRCGHKSSTSRR 165
Score = 42.3 bits (86), Expect(3) = 6e-022
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +3 / +3
Query: 459 KMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXXXXXXXXXXXQKQITLFSKTKARM 635
+MSP YLS+ P K L C+IGANYA + Q+ F K M
Sbjct: 3 EMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILDTTGKGTLTMRTQVQYFKKAADNM 179
Score = 41.8 bits (85), Expect(4) = 7e-022
Identities = 27/65 (41%), Positives = 30/65 (46%)
Frame = -1 / -1
Query: 653 LAAAPRHSCFSFREQRDLFLQRECPVSRGVENARSTRRVIGTNSAREQVKL*YRCQREVS 474
LA H E DL RE P SRGVE+A ST V+G N A + L R EV
Sbjct: 197 LAWVADHVVRRLLEVLDLCPHRERPFSRGVEDAGSTGSVVGANLAEAE*DLVVRQHGEVR 18
Query: 473 RWTHL 459
HL
Sbjct: 17 LGAHL 3
Score = 40.0 bits (81), Expect(4) = 5e-052
Identities = 20/27 (74%), Positives = 21/27 (77%)
Frame = -2 / -2
Query: 1219 *KMATTPRSFVACVGCSMSQNM*SSRS 1139
*K ATTPR +ACVG SMSQNM SS S
Sbjct: 757 *KKATTPR*MLACVG*SMSQNMYSSWS 677
Score = 37.3 bits (75), Expect(4) = 5e-072
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 207 LARSLFLLSGGGNDFSAF 260
Score = 35.4 bits (71), Expect(4) = 5e-052
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 284 LWAGGGGVEGGEVVAAAAEEEEGPR 210
Score = 33.1 bits (66), Expect(4) = 2e-032
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1 / +1
Query: 1153 TCSGTCYILRRQQMNVGWSPSSTA 1224
TCSGTC+ R N SPSS A
Sbjct: 691 TCSGTCFXPRTPTFNAALSPSSNA 762
Score = 30.4 bits (60), Expect(4) = 2e-032
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 211 RGPSSSSAAAATTSPPS 261
Score = 29.0 bits (57), Expect(4) = 7e-022
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1 / -1
Query: 1223 AVEDGDHPTFICCLRRM*HVPEHVVVAI 1140
A+E+GD+ +R HVPEHV + +
Sbjct: 761 ALEEGDNAALNVGVRGXKHVPEHVFIVV 678
Score = 27.6 bits (54), Expect(4) = 7e-022
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 718 KAEKSLPPALIRNKD 674
KAEKSLPP L R +D
Sbjct: 259 KAEKSLPPPLRRKRD 215
Score = 23.1 bits (44), Expect(3) = 6e-022
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 1145 RRLHVLGHATSYA 1183
R +HVLGHA+ +A
Sbjct: 683 R*IHVLGHASXHA 721
>gb|BF261108.2|BF261108 HVSMEf0023M12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0023M12f, mRNA sequence
Length = 736
Score = 195 bits (420), Expect(3) = 1e-066
Identities = 77/132 (58%), Positives = 99/132 (75%)
Frame = +3 / +3
Query: 753 AYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFN 932
AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG CN ANS+AQ FN
Sbjct: 132 AYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGECNQQANSLAQAFN 311
Query: 933 RLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAAVMC 1112
LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V ACCGSGKLNA VMC
Sbjct: 312 GLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTACCGSGKLNAEVMC 491
Query: 1113 AQPNTTYCSDRD 1148
+ P TT C D
Sbjct: 492 SHPGTTACPAAD 527
Score = 132 bits (283), Expect(3) = 8e-041
Identities = 67/122 (54%), Positives = 79/122 (64%)
Frame = -2 / -1
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 508 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 329
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VET 770
+LR L CA ELA LH PL M L PGV PI GTSRIP +RAP +A +C *V T
Sbjct: 328 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVT 149
Query: 769 ML 764
+L
Sbjct: 148 IL 143
Score = 88.6 bits (187), Expect(2) = 2e-021
Identities = 44/120 (36%), Positives = 66/120 (55%)
Frame = +2 / +2
Query: 770 GLNLCPAYRRVVQVGSTEVGDPRRASYRLYPRLQSPHGQRRMQRRCQLYGAELQQTPKAR 949
G +L A+ ++ GS GDPRRA+ R++ + H QRR+Q QL GA +Q+ P+ +
Sbjct: 149 GHHLHRAHPGALRHGSAHGGDPRRAADRVHAGAEGRHAQRRVQPAGQLPGAGVQRPPQGQ 328
Query: 950 GGESRRILHARHEILHCKHLQFCHRLDGQPSSGWAPGGRQGMLRIGKTERGGHVRPAKHD 1129
RR H ++L + LQ R DGQ + A G+LR+ + +RGG V+P HD
Sbjct: 329 ARRGRRRHHEGAQVLRRRQLQHPQRDDGQLARSRAEAREDGVLRLREAQRGGDVQPPGHD 508
Score = 63.8 bits (133), Expect(3) = 1e-066
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +3
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 522 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 608
Score = 48.3 bits (99), Expect(3) = 8e-041
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -1
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 607 P*KKATTPRWMVACVGWSMSQNM*SSWS 524
Score = 34.5 bits (69), Expect(2) = 2e-021
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +1 / +1
Query: 1150 TTCSGTCYILRRQQMNVGWSPSSTA 1224
TTCSGTC R N SPSSTA
Sbjct: 535 TTCSGTCSTPRTPPSNAASSPSSTA 609
Score = 34.5 bits (69), Expect(3) = 1e-066
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDF AF
Sbjct: 54 LARSLFLLSGGGNDFFAF 107
Score = 25.8 bits (50), Expect(3) = 8e-041
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 718 KAEKSLPPALIRNKD 674
KA+KSLPP L R +D
Sbjct: 106 KAKKSLPPPLRRKRD 62
>gb|BQ462871.1|BQ462871 HI02E11r HI Hordeum vulgare subsp. vulgare cDNA clone HI02E11
5-PRIME, mRNA sequence
Length = 683
Score = 169 bits (364), Expect(3) = 1e-065
Identities = 68/125 (54%), Positives = 89/125 (71%)
Frame = +3 / +3
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG C
Sbjct: 309 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGEC 488
Query: 897 NDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRAC 1076
N ANS+AQ FN LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V AC
Sbjct: 489 NQQANSLAQAFNGLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTAC 668
Query: 1077 CGSGK 1091
CGSGK
Sbjct: 669 CGSGK 683
Score = 112 bits (240), Expect(3) = 2e-046
Identities = 59/109 (54%), Positives = 69/109 (63%)
Frame = -2 / -2
Query: 1090 FPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFATSSLRSLLKFCAIE 911
FP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+ +LR L CA E
Sbjct: 682 FPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASASLALRRPLNACARE 503
Query: 910 LAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
LA LH PL M L PGV PI GTSRIP +RAP +A +C *V T+L
Sbjct: 502 LACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVTIL 356
Score = 83.1 bits (175), Expect(3) = 1e-030
Identities = 41/93 (44%), Positives = 47/93 (50%)
Frame = +1 / +1
Query: 757 TSVAWSQPMSSISTRCTSWEHGGWGS*TCQLSAVPQAPESPWPTADATTLPTLWRRTSTD 936
TS WS P SS S R T+WE WGS TC+ S + PTA AT+ PT WRR ST
Sbjct: 349 TSSRWSPPTSSTSRRSTTWERAWWGSSTCRRSGARRGRGPACPTASATSRPTPWRRRSTA 528
Query: 937 S*GSRWRKPSHPPCPA*DTPLQAPTILSPT*WT 1035
S +P PP + TP T S *WT
Sbjct: 529 SSRPSSPRPPPPP*RSSSTPSPPTTTSSTR*WT 627
Score = 83.1 bits (175), Expect(3) = 1e-065
Identities = 35/79 (44%), Positives = 45/79 (56%)
Frame = +3 / +3
Query: 399 SGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXXXXXX 578
+GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 3 TGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILDTTGK 182
Query: 579 XXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 183 GTLTMRTQVQYFKKAADNM 239
Score = 77.1 bits (162), Expect(3) = 2e-046
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 238 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 59
Query: 454 PRRRATKSARL*PFVNRP 401
PRR SARL*P V RP
Sbjct: 58 PRRCEMTSARL*PLVKRP 5
Score = 70.3 bits (147), Expect(3) = 2e-023
Identities = 37/105 (35%), Positives = 56/105 (53%)
Frame = +2 / +2
Query: 770 GLNLCPAYRRVVQVGSTEVGDPRRASYRLYPRLQSPHGQRRMQRRCQLYGAELQQTPKAR 949
G +L A+ ++ GS GDPRRA+ R++ + H QRR+Q QL GA +Q+ P+ +
Sbjct: 362 GHHLHRAHPGALRHGSAHGGDPRRAADRVHAGAEGRHAQRRVQPAGQLPGAGVQRPPQGQ 541
Query: 950 GGESRRILHARHEILHCKHLQFCHRLDGQPSSGWAPGGRQGMLRI 1084
RR H ++L + LQ R DGQ + A G+LR+
Sbjct: 542 ARRGRRRHHEGAQVLRRRQLQHPQRDDGQLARSRAEAREDGVLRL 676
Score = 59.3 bits (123), Expect(4) = 1e-021
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = -1 / -1
Query: 653 LAAAPRHSCFSFREQRDLFLQRECPVSRGVENARSTRRVIGTNSAREQVKL*YRCQREVS 474
LA H E DL RE P SRGVE+A ST V+G N A + L R EV
Sbjct: 257 LAWVADHVVRRLLEVLDLCPHRERPFSRGVEDAGSTGSVVGANLAEAE*DLVVRQHGEVR 78
Query: 473 RWTHLEPQTSRD*IGKVVAIRE 408
HLE QT D +G+VVA+ E
Sbjct: 77 LGAHLETQTL*DDVGEVVAVGE 12
Score = 58.3 bits (121), Expect(3) = 1e-030
Identities = 34/71 (47%), Positives = 38/71 (53%)
Frame = +1 / +1
Query: 409 SRMATTLPI*SRDVWGSR*VHLLTSR*HRYQSLTCSRAELVPITRLVDLAFSTPRETGHS 588
S ATT P S +VW SR* TS R + A L P T VD A STPRE G S
Sbjct: 13 SPTATTSPTSSHNVWVSR*APSRTSPCCRTTRSYSASARLAPTTLPVDPASSTPREKGRS 192
Query: 589 RCKNKSRCSRK 621
RC +KS SR+
Sbjct: 193 RCGHKSSTSRR 225
Score = 46.9 bits (96), Expect(3) = 2e-023
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +2
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 128 DWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEGGGQHDLLPKQ 256
Score = 38.6 bits (78), Expect(4) = 1e-021
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1 / -1
Query: 851 DSWHV*DPQPPCSQLVQRVDMLDIG*DHATDV 756
D HV DP S +V+R+D+LD+G DH DV
Sbjct: 443 DRRHVEDPHHARSHVVERLDVLDVGGDHLDDV 348
Score = 37.3 bits (75), Expect(3) = 1e-065
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 267 LARSLFLLSGGGNDFSAF 320
Score = 35.4 bits (71), Expect(3) = 2e-046
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 344 LWAGGGGVEGGEVVAAAAEEEEGPR 270
Score = 33.1 bits (66), Expect(4) = 1e-021
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1 / -1
Query: 1082 SAACPVDHPEPSH*MAVHQVGDKIVGACNGVSHAGHGGCDGFRHLEP*ESVEVLR 918
+AA + P+P + VH + + +V +GV HGG G L E+VE LR
Sbjct: 674 AAARRLHVPQPGYERVVHHLVEDVVVGGDGVLELLHGGGGGLGELGLEEAVERLR 510
Score = 30.4 bits (60), Expect(3) = 1e-030
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 271 RGPSSSSAAAATTSPPS 321
Score = 30.4 bits (60), Expect(3) = 2e-023
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 401 RTVHEWLQPCRFSRATSGVQDESTCLPL 484
R +H+ LQP R TSG +DE +PL
Sbjct: 5 RPLHQRLQPRRRHLTTSGFRDEPQAVPL 88
Score = 27.6 bits (54), Expect(4) = 1e-021
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 718 KAEKSLPPALIRNKD 674
KAEKSLPP L R +D
Sbjct: 319 KAEKSLPPPLRRKRD 275
>gb|BI959830.1|BI959830 HVSMEn0021N12f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0021N12f,
mRNA sequence
Length = 624
Score = 188 bits (406), Expect(3) = 2e-063
Identities = 76/144 (52%), Positives = 99/144 (68%)
Frame = +3 / +3
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +G+ VP IGCTPG R M NG C
Sbjct: 30 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGMRGVPPIGCTPGQRAGMPNGEC 209
Query: 897 NDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRAC 1076
N ANS+AQ FN LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V AC
Sbjct: 210 NQQANSLAQAFNGLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTAC 389
Query: 1077 CGSGKLNAAVMCAQPNTTYCSDRD 1148
CGSGKLNA VMC+ P TT C D
Sbjct: 390 CGSGKLNAEVMCSHPGTTACPAAD 461
Score = 130 bits (278), Expect(3) = 1e-039
Identities = 66/122 (54%), Positives = 78/122 (63%)
Frame = -2 / -3
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 442 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 263
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VET 770
+LR L CA ELA LH PL M L PGV PI GT RIP +RAP +A +C *V T
Sbjct: 262 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTPRIPTMRAPMS*SAWMCSM*VVT 83
Query: 769 ML 764
+L
Sbjct: 82 IL 77
Score = 63.8 bits (133), Expect(3) = 2e-063
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +3
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 456 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 542
Score = 48.3 bits (99), Expect(3) = 1e-039
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -3
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 541 P*KKATTPRWMVACVGWSMSQNM*SSWS 458
Score = 30.4 bits (60), Expect(3) = 2e-063
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3 / +3
Query: 681 FLISAGGNDFSAF 719
FL+S GGNDFSAF
Sbjct: 3 FLLSGGGNDFSAF 41
Score = 24.0 bits (46), Expect(3) = 1e-039
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / -3
Query: 718 KAEKSLPPALIR 683
KAEKSLPP L R
Sbjct: 40 KAEKSLPPPLRR 5
>gb|CA023872.1|CA023872 HZ47K17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47K17
5-PRIME, mRNA sequence
Length = 554
Score = 196 bits (422), Expect(3) = 4e-062
Identities = 79/144 (54%), Positives = 101/144 (70%)
Frame = +3 / +2
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG C
Sbjct: 71 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGEC 250
Query: 897 NDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRAC 1076
N ANS+AQ FN LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V AC
Sbjct: 251 NQQANSLAQAFNGLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTAC 430
Query: 1077 CGSGKLNAAVMCAQPNTTYCSDRD 1148
CGSGKLNA VMC+ P TT C D
Sbjct: 431 CGSGKLNAEVMCSHPGTTACPAAD 502
Score = 132 bits (283), Expect(3) = 6e-039
Identities = 67/122 (54%), Positives = 79/122 (64%)
Frame = -2 / -3
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 483 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 304
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VET 770
+LR L CA ELA LH PL M L PGV PI GTSRIP +RAP +A +C *V T
Sbjct: 303 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVT 124
Query: 769 ML 764
+L
Sbjct: 123 IL 118
Score = 88.6 bits (187), Expect(3) = 1e-021
Identities = 44/120 (36%), Positives = 66/120 (55%)
Frame = +2 / +1
Query: 770 GLNLCPAYRRVVQVGSTEVGDPRRASYRLYPRLQSPHGQRRMQRRCQLYGAELQQTPKAR 949
G +L A+ ++ GS GDPRRA+ R++ + H QRR+Q QL GA +Q+ P+ +
Sbjct: 124 GHHLHRAHPGALRHGSAHGGDPRRAADRVHAGAEGRHAQRRVQPAGQLPGAGVQRPPQGQ 303
Query: 950 GGESRRILHARHEILHCKHLQFCHRLDGQPSSGWAPGGRQGMLRIGKTERGGHVRPAKHD 1129
RR H ++L + LQ R DGQ + A G+LR+ + +RGG V+P HD
Sbjct: 304 ARRGRRRHHEGAQVLRRRQLQHPQRDDGQLARSRAEAREDGVLRLREAQRGGDVQPPGHD 483
Score = 45.1 bits (92), Expect(3) = 4e-062
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 1137 SDRDDYMFWDMLHPTQAT 1190
+D DDYMFWDMLHPT AT
Sbjct: 497 ADHDDYMFWDMLHPTHAT 550
Score = 37.3 bits (75), Expect(3) = 4e-062
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 29 LARSLFLLSGGGNDFSAF 82
Score = 35.4 bits (71), Expect(3) = 6e-039
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -2
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 106 LWAGGGGVEGGEVVAAAAEEEEGPR 32
Score = 32.2 bits (64), Expect(3) = 6e-039
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / -3
Query: 1189 VACVGCSMSQNM*SSRS 1139
VACVG SMSQNM*SS S
Sbjct: 549 VACVGWSMSQNM*SSWS 499
Score = 30.4 bits (60), Expect(3) = 1e-021
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 33 RGPSSSSAAAATTSPPS 83
Score = 22.6 bits (43), Expect(3) = 1e-021
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 1145 RRLHVLGHATSYA 1183
R LHVLGHA +A
Sbjct: 505 R*LHVLGHAPPHA 543
>gb|BQ764973.1|BQ764973 EBca01_SQ005_M11_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_M11 5', mRNA sequence
Length = 630
Score = 191 bits (411), Expect(2) = 1e-060
Identities = 76/127 (59%), Positives = 96/127 (75%)
Frame = +3 / +1
Query: 768 MVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNRLLRL 947
MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG CN ANS+AQ FN LLR
Sbjct: 7 MVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGECNQQANSLAQAFNGLLRA 186
Query: 948 EVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAAVMCAQPNT 1127
++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V ACCGSGKLNA VMC+ P T
Sbjct: 187 KLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTACCGSGKLNAEVMCSHPGT 366
Query: 1128 TYCSDRD 1148
T C D
Sbjct: 367 TACPAAD 387
Score = 129 bits (277), Expect(2) = 1e-037
Identities = 66/122 (54%), Positives = 78/122 (63%)
Frame = -2 / -2
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 368 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 189
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VET 770
+LR L CA ELA LH PL M PGV PI GTSRIP +RAP +A +C *V T
Sbjct: 188 LALRRPLNACARELACWLHSPLGMPARCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVT 9
Query: 769 ML 764
+L
Sbjct: 8 IL 3
Score = 63.8 bits (133), Expect(2) = 1e-060
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +1
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 382 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 468
Score = 48.3 bits (99), Expect(2) = 1e-037
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 467 P*KKATTPRWMVACVGWSMSQNM*SSWS 384
>gb|BI959444.1|BI959444 HVSMEn0019L05f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019L05f,
mRNA sequence
Length = 639
Score = 189 bits (408), Expect(3) = 2e-056
Identities = 77/140 (55%), Positives = 98/140 (70%)
Frame = +3 / +3
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG C
Sbjct: 123 FSAFDPSTATPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGEC 302
Query: 897 NDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRAC 1076
N ANS+AQ FN LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V AC
Sbjct: 303 NQQANSLAQAFNGLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTAC 482
Query: 1077 CGSGKLNAAVMCAQPNTTYC 1136
CGS KLNA VMC P TT C
Sbjct: 483 CGSRKLNAEVMCIHPGTTGC 542
Score = 128 bits (274), Expect(2) = 3e-033
Identities = 66/122 (54%), Positives = 78/122 (63%)
Frame = -2 / -3
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SF +PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 535 VVPGWMHITSALSFREPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 356
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VET 770
+LR L CA ELA LH PL M L PGV PI GTSRIP +RAP +A +C *V T
Sbjct: 355 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVT 176
Query: 769 ML 764
+L
Sbjct: 175 IL 170
Score = 37.3 bits (75), Expect(3) = 2e-056
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 81 LARSLFLLSGGGNDFSAF 134
Score = 34.5 bits (69), Expect(2) = 3e-033
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1 / -2
Query: 719 EGGEVIAAGADKEQGPR 669
EGGEV+AA A++E+GPR
Sbjct: 134 EGGEVVAAAAEEEEGPR 84
Score = 32.2 bits (64), Expect(3) = 2e-056
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 1146 DDYMFWDMLHP 1178
DDY+FW+MLHP
Sbjct: 558 DDYLFWEMLHP 590
>gb|BJ463222.1|BJ463222 BJ463222 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags26e24 5', mRNA sequence
Length = 540
Score = 176 bits (379), Expect(2) = 2e-056
Identities = 71/123 (57%), Positives = 89/123 (72%)
Frame = +3 / +3
Query: 780 YVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNRLLRLEVAK 959
+ HI ALY +GAR +GILDVP IGCTPG R M NG CN ANS+AQ FN LL ++A+
Sbjct: 9 HAXHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGECNQQANSLAQAFNGLLTAKLAE 188
Query: 960 AVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAAVMCAQPNTTYCS 1139
A A++M ++YS+A+ YN + ++MD+ LVAGLR V ACCGSGKLNA VMC+ P TT C
Sbjct: 189 AAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTACCGSGKLNAEVMCSHPGTTACP 368
Query: 1140 DRD 1148
D
Sbjct: 369 AAD 377
Score = 125 bits (267), Expect(2) = 2e-036
Identities = 60/106 (56%), Positives = 70/106 (66%)
Frame = -2 / -3
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 358 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 179
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAP 812
++R L CA ELA LH PL M L PGV PI GTSRIP +RAP
Sbjct: 178 LAVRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAP 41
Score = 88.1 bits (186), Expect(2) = 4e-021
Identities = 42/116 (36%), Positives = 62/116 (53%)
Frame = +2 / +2
Query: 782 CPAYRRVVQVGSTEVGDPRRASYRLYPRLQSPHGQRRMQRRCQLYGAELQQTPKARGGES 961
C + ++ GS GDPRRA+ R++ + H QRR+Q QL GA +Q+ P +
Sbjct: 11 CEXHPGALRHGSAHGGDPRRAADRVHAGAEGRHAQRRVQPAGQLPGAGVQRPPHGQARRG 190
Query: 962 RRILHARHEILHCKHLQFCHRLDGQPSSGWAPGGRQGMLRIGKTERGGHVRPAKHD 1129
RR H ++L + LQ R DGQ + A G+LR+ + +RGG V+P HD
Sbjct: 191 RRRHHEGAQVLRRRQLQHPQRDDGQLARSRAEAREDGVLRLREAQRGGDVQPPGHD 358
Score = 63.8 bits (133), Expect(2) = 2e-056
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +3
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 372 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 458
Score = 48.3 bits (99), Expect(2) = 2e-036
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -3
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 457 P*KKATTPRWMVACVGWSMSQNM*SSWS 374
Score = 34.1 bits (68), Expect(2) = 4e-021
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +1 / +1
Query: 1150 TTCSGTCYILRRQQMNVGWSPSSTA 1224
TTCSGTC R N SPSSTA
Sbjct: 385 TTCSGTCSTPRTPPSNAXSSPSSTA 459
>gb|CA020504.1|CA020504 HZ36I05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36I05
5-PRIME, mRNA sequence
Length = 626
Score = 87.7 bits (185), Expect(4) = 3e-055
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 130 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 309
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 310 TTGKGTLTMRTQVQYFKKAADNM 378
Score = 80.8 bits (170), Expect(4) = 3e-055
Identities = 32/58 (55%), Positives = 38/58 (65%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANG 890
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG
Sbjct: 448 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNG 621
Score = 80.8 bits (170), Expect(4) = 1e-037
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 377 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 198
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 197 PRRCEMTSARL*PLVKRPVGLPG 129
Score = 67.5 bits (141), Expect(4) = 3e-055
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +3 / +1
Query: 270 VPLMFVFGDSLVDVGNNNFLPPPAPRAASPYGIDFPSGTPG 392
V ++VFGDSLVDVGNN++LP PAPRA PYG+D P G
Sbjct: 25 VNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTG 147
Score = 60.6 bits (126), Expect(4) = 5e-023
Identities = 38/89 (42%), Positives = 45/89 (50%)
Frame = -1 / -3
Query: 653 LAAAPRHSCFSFREQRDLFLQRECPVSRGVENARSTRRVIGTNSAREQVKL*YRCQREVS 474
LA H E DL RE P SRGVE+A ST V+G N A + L R EV
Sbjct: 396 LAWVADHVVRRLLEVLDLCPHRERPFSRGVEDAGSTGSVVGANLAEAE*DLVVRQHGEVR 217
Query: 473 RWTHLEPQTSRD*IGKVVAIREPS*DGAG 387
HLE QT D +G+VVA+ E + AG
Sbjct: 216 LGAHLETQTL*DDVGEVVAVGEAAGGPAG 130
Score = 53.8 bits (111), Expect(4) = 1e-037
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -2 / -1
Query: 895 HPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
H PL M L PGV PI GTSRIP +RAP +A +C *V T+L
Sbjct: 626 HSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVTIL 495
Score = 49.2 bits (101), Expect(4) = 2e-024
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +1 / +2
Query: 757 TSVAWSQPMSSISTRCTSWEHGGWGS*TCQLSAVPQAPESPWPTA 891
TS WS P SS S R T+WE WGS TC+ S + PTA
Sbjct: 488 TSSRWSPPTSSTSRRSTTWERAWWGSSTCRRSGARRGRGPACPTA 622
Score = 46.9 bits (96), Expect(4) = 2e-024
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +3
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 267 DWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEGGGQHDLLPKQ 395
Score = 43.2 bits (88), Expect(4) = 1e-037
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 153 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 34
Score = 41.8 bits (85), Expect(4) = 2e-024
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1 / +2
Query: 280 CLCSVIRWSMSETITSCRRLHPVLHLHTASTSLLAPPAPSQDGSRMATT 426
C CS RW T T+CRR P TA TS PPA S + T+
Sbjct: 35 CTCSATRWWTWATTTTCRRRRPGRTGRTAWTSPAGPPAASPTATTSPTS 181
Score = 38.6 bits (78), Expect(4) = 5e-023
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1 / -3
Query: 851 DSWHV*DPQPPCSQLVQRVDMLDIG*DHATDV 756
D HV DP S +V+R+D+LD+G DH DV
Sbjct: 582 DRRHVEDPHHARSHVVERLDVLDVGGDHLDDV 487
Score = 37.3 bits (75), Expect(4) = 3e-055
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 406 LARSLFLLSGGGNDFSAF 459
Score = 36.3 bits (73), Expect(4) = 5e-023
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -2 / -1
Query: 376 GKSMPYXXXXXXXXXXRKLLFPTSTSESPNT 284
G+SMPY R L PTSTSESPNT
Sbjct: 131 GRSMPYGRFALGAGAGR*SLLPTSTSESPNT 39
Score = 35.4 bits (71), Expect(4) = 1e-037
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 483 LWAGGGGVEGGEVVAAAAEEEEGPR 409
Score = 30.4 bits (60), Expect(4) = 2e-024
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 410 RGPSSSSAAAATTSPPS 460
Score = 27.6 bits (54), Expect(4) = 5e-023
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 718 KAEKSLPPALIRNKD 674
KAEKSLPP L R +D
Sbjct: 458 KAEKSLPPPLRRKRD 414
>gb|CA024879.1|CA024879 HZ50J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50J05
5-PRIME, mRNA sequence
Length = 634
Score = 87.7 bits (185), Expect(4) = 7e-054
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +2
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 149 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 328
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 329 TTGKGTLTMRTQVQYFKKAADNM 397
Score = 80.8 bits (170), Expect(4) = 4e-035
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 396 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 217
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 216 PRRCEMTSARL*PLVKRPVGLPG 148
Score = 75.8 bits (159), Expect(4) = 7e-054
Identities = 30/55 (54%), Positives = 36/55 (65%)
Frame = +3 / +2
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPM 881
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M
Sbjct: 467 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGM 631
Score = 68.0 bits (142), Expect(4) = 7e-054
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +3 / +2
Query: 234 AAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYGIDFPSGTPG 392
AA E V ++VFGDSLVDVGNN++LP PAPRA PYG+D P G
Sbjct: 8 AAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTG 166
Score = 60.6 bits (126), Expect(4) = 4e-023
Identities = 38/89 (42%), Positives = 45/89 (50%)
Frame = -1 / -1
Query: 653 LAAAPRHSCFSFREQRDLFLQRECPVSRGVENARSTRRVIGTNSAREQVKL*YRCQREVS 474
LA H E DL RE P SRGVE+A ST V+G N A + L R EV
Sbjct: 415 LAWVADHVVRRLLEVLDLCPHRERPFSRGVEDAGSTGSVVGANLAEAE*DLVVRQHGEVR 236
Query: 473 RWTHLEPQTSRD*IGKVVAIREPS*DGAG 387
HLE QT D +G+VVA+ E + AG
Sbjct: 235 LGAHLETQTL*DDVGEVVAVGEAAGGPAG 149
Score = 46.9 bits (96), Expect(4) = 1e-023
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +1
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 286 DWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEGGGQHDLLPKQ 414
Score = 46.0 bits (94), Expect(4) = 1e-023
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +1 / +3
Query: 757 TSVAWSQPMSSISTRCTSWEHGGWGS*TCQLS 852
TS WS P SS S R T+WE WGS TC+ S
Sbjct: 507 TSSRWSPPTSSTSRRSTTWERAWWGSSTCRRS 602
Score = 45.5 bits (93), Expect(4) = 4e-035
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = -2 / -2
Query: 880 MGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
M L PGV PI GTSRIP +RAP +A +C *V T+L
Sbjct: 630 MPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVTIL 514
Score = 43.2 bits (88), Expect(4) = 4e-035
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 172 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 53
Score = 41.8 bits (85), Expect(4) = 1e-023
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1 / +3
Query: 280 CLCSVIRWSMSETITSCRRLHPVLHLHTASTSLLAPPAPSQDGSRMATT 426
C CS RW T T+CRR P TA TS PPA S + T+
Sbjct: 54 CTCSATRWWTWATTTTCRRRRPGRTGRTAWTSPAGPPAASPTATTSPTS 200
Score = 38.6 bits (78), Expect(4) = 4e-023
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1 / -1
Query: 851 DSWHV*DPQPPCSQLVQRVDMLDIG*DHATDV 756
D HV DP S +V+R+D+LD+G DH DV
Sbjct: 601 DRRHVEDPHHARSHVVERLDVLDVGGDHLDDV 506
Score = 37.3 bits (75), Expect(4) = 7e-054
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 425 LARSLFLLSGGGNDFSAF 478
Score = 36.8 bits (74), Expect(4) = 4e-023
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = -2 / -2
Query: 376 GKSMPYXXXXXXXXXXRKLLFPTSTSESPNTNIKGTDERFCSTSVSAA 233
G+SMPY R L PTSTSESPNT T S +AA
Sbjct: 150 GRSMPYGRFALGAGAGR*SLLPTSTSESPNTYTAFTSRPPFSPPAAAA 7
Score = 35.4 bits (71), Expect(4) = 4e-035
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 502 LWAGGGGVEGGEVVAAAAEEEEGPR 428
Score = 30.4 bits (60), Expect(4) = 1e-023
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 429 RGPSSSSAAAATTSPPS 479
Score = 27.6 bits (54), Expect(4) = 4e-023
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 718 KAEKSLPPALIRNKD 674
KAEKSLPP L R +D
Sbjct: 477 KAEKSLPPPLRRKRD 433
>gb|BM816773.1|BM816773 HC02H07_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC02H07_T3.ab1 similar to (AC007396) T4O12.12
[Arabidopsis thaliana],(AC087851) putative proline-rich
protein [Oryza sativa], mRNA sequence
Length = 790
Score = 165 bits (354), Expect(2) = 6e-053
Identities = 66/113 (58%), Positives = 84/113 (74%)
Frame = +3 / +1
Query: 810 LGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNRLLRLEVAKAVASSMPGMR 989
+GAR +GILDVP IGCTPG R M NG CN ANS+AQ FN LL+ ++A+A A++M ++
Sbjct: 1 VGARMVGILDVPPIGCTPGQRAGMPNGECNQQANSLAQAFNGLLKAKLAEAAAATMKELK 180
Query: 990 YSIASTYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAAVMCAQPNTTYCSDRD 1148
YS+A+ YN + ++MD+ LVAGLR V ACCGSGKLNA VMC+ P TT C D
Sbjct: 181 YSVAANYNILNEMMDNSLVAGLRHVKTACCGSGKLNAEVMCSHPGTTACPAAD 339
Score = 126 bits (270), Expect(2) = 9e-037
Identities = 61/106 (57%), Positives = 70/106 (66%)
Frame = -2 / -3
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 320 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 141
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAP 812
+LR L CA ELA LH PL M L PGV PI GTSRIP +RAP
Sbjct: 140 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAP 3
Score = 86.8 bits (183), Expect(2) = 8e-021
Identities = 41/106 (38%), Positives = 59/106 (55%)
Frame = +2 / +3
Query: 812 GSTEVGDPRRASYRLYPRLQSPHGQRRMQRRCQLYGAELQQTPKARGGESRRILHARHEI 991
GS GDPRRA+ R++ + H QRR+Q QL GA +Q+ P+ + RR H ++
Sbjct: 3 GSAHGGDPRRAADRVHAGAEGRHAQRRVQPAGQLPGAGVQRPPQGQARRGRRRHHEGAQV 182
Query: 992 LHCKHLQFCHRLDGQPSSGWAPGGRQGMLRIGKTERGGHVRPAKHD 1129
L + LQ R DGQ + A G+LR+ + +RGG V+P HD
Sbjct: 183 LRRRQLQHPQRDDGQLARSRAEAREDGVLRLREAQRGGDVQPPGHD 320
Score = 63.8 bits (133), Expect(2) = 6e-053
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +1
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 334 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 420
Score = 48.3 bits (99), Expect(2) = 9e-037
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -3
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 419 P*KKATTPRWMVACVGWSMSQNM*SSWS 336
Score = 34.5 bits (69), Expect(2) = 8e-021
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = +1 / +2
Query: 1150 TTCSGTCYILRRQQMNVGWSPSSTA 1224
TTCSGTC R N SPSSTA
Sbjct: 347 TTCSGTCSTPRTPPSNAASSPSSTA 421
>gb|CA027046.1|CA027046 HZ57L22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57L22
5-PRIME, mRNA sequence
Length = 436
Score = 182 bits (393), Expect(2) = 1e-052
Identities = 72/123 (58%), Positives = 92/123 (74%)
Frame = +3 / +1
Query: 780 YVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNRLLRLEVAK 959
Y++HI ALY +GAR +GILDVP IGCTPG R M NG CN ANS+AQ FN LL+ ++A+
Sbjct: 13 YIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGECNQQANSLAQAFNGLLKAKLAE 192
Query: 960 AVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAAVMCAQPNTTYCS 1139
A A++M ++YS+A+ YN + ++MD+ LVAGLR V ACCGSGKLNA VMC+ P TT C
Sbjct: 193 AAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTACCGSGKLNAEVMCSHPGTTACP 372
Query: 1140 DRD 1148
D
Sbjct: 373 AAD 381
Score = 128 bits (274), Expect(2) = 1e-032
Identities = 63/114 (55%), Positives = 74/114 (64%)
Frame = -2 / -3
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 362 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 183
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASIC 788
+LR L CA ELA LH PL M L PGV PI GTSRIP +RAP +A +C
Sbjct: 182 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMC 21
Score = 45.1 bits (92), Expect(2) = 1e-052
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 1137 SDRDDYMFWDMLHPTQAT 1190
+D DDYMFWDMLHPT AT
Sbjct: 376 ADHDDYMFWDMLHPTHAT 429
Score = 32.2 bits (64), Expect(2) = 1e-032
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / -3
Query: 1189 VACVGCSMSQNM*SSRS 1139
VACVG SMSQNM*SS S
Sbjct: 428 VACVGWSMSQNM*SSWS 378
>gb|BG344189.2|BG344189 HVSMEg0008A10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008A10f, mRNA sequence
Length = 788
Score = 183 bits (394), Expect(3) = 6e-052
Identities = 74/135 (54%), Positives = 96/135 (71%)
Frame = +3 / +3
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG C
Sbjct: 93 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGEC 272
Query: 897 NDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRAC 1076
N ANS+AQ FN LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V AC
Sbjct: 273 NQQANSLAQAFNGLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTAC 452
Query: 1077 CGSGKLNAAVMCAQP 1121
CGS KLNA VMC+ P
Sbjct: 453 CGSRKLNAEVMCSPP 497
Score = 117 bits (250), Expect(2) = 3e-030
Identities = 62/119 (52%), Positives = 74/119 (62%)
Frame = -2 / -2
Query: 1120 GWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFATSSL 941
G H+T+A S +PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+ +L
Sbjct: 496 GGLHITSALSXREPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASASLAL 317
Query: 940 RSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
R L CA ELA LH PL M L PGV PI GTSRIP +RAP +A +C *V T+L
Sbjct: 316 RRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVTIL 140
Score = 37.3 bits (75), Expect(3) = 6e-052
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 51 LARSLFLLSGGGNDFSAF 104
Score = 35.4 bits (71), Expect(2) = 3e-030
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 128 LWAGGGGVEGGEVVAAAAEEEEGPR 54
Score = 23.5 bits (45), Expect(3) = 6e-052
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3 / +3
Query: 1149 DYMFWDMLHPTQATNERGVVAIFYG 1223
+Y+ HP AT +RG +F G
Sbjct: 531 NYLSGKCFHPKHATIQRGGCRLFLG 605
>gb|CA018242.1|CA018242 HV08A20r HV Hordeum vulgare subsp. vulgare cDNA clone HV08A20
5-PRIME, mRNA sequence
Length = 607
Score = 95.0 bits (201), Expect(4) = 2e-050
Identities = 38/73 (52%), Positives = 45/73 (61%)
Frame = +3 / +3
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG C
Sbjct: 384 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGEC 563
Query: 897 NDAANSMAQNFNR 935
N ANS+ R
Sbjct: 564 NQQANSLGAGVQR 602
Score = 87.7 bits (185), Expect(4) = 2e-050
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 66 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 245
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 246 TTGKGTLTMRTQVQYFKKAADNM 314
Score = 80.8 bits (170), Expect(4) = 6e-034
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 313 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 134
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 133 PRRCEMTSARL*PLVKRPVGLPG 65
Score = 62.0 bits (129), Expect(3) = 5e-025
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +1 / +1
Query: 757 TSVAWSQPMSSISTRCTSWEHGGWGS*TCQLSAVPQAPESPWPTADATTLPTLW 918
TS WS P SS S R T+WE WGS TC+ S + PTA AT+ PT W
Sbjct: 424 TSSRWSPPTSSTSRRSTTWERAWWGSSTCRRSGARRGRGPACPTASATSRPTPW 585
Score = 60.6 bits (126), Expect(3) = 5e-025
Identities = 36/78 (46%), Positives = 40/78 (51%)
Frame = +1 / +1
Query: 388 PAPSQDGSRMATTLPI*SRDVWGSR*VHLLTSR*HRYQSLTCSRAELVPITRLVDLAFST 567
PA S ATT P S +VW SR* TS R + A L P T VD A ST
Sbjct: 67 PAGPPAASPTATTSPTSSHNVWVSR*APSRTSPCCRTTRSYSASARLAPTTLPVDPASST 246
Query: 568 PRETGHSRCKNKSRCSRK 621
PRE G SRC +KS SR+
Sbjct: 247 PREKGRSRCGHKSSTSRR 300
Score = 60.2 bits (125), Expect(4) = 6e-034
Identities = 29/50 (58%), Positives = 33/50 (66%)
Frame = -2 / -1
Query: 913 ELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
ELA LH PL M L PGV PI GTSRIP +RAP +A +C *V T+L
Sbjct: 580 ELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVTIL 431
Score = 37.3 bits (75), Expect(4) = 2e-050
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 342 LARSLFLLSGGGNDFSAF 395
Score = 36.8 bits (74), Expect(4) = 2e-050
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 321 NFLPPPAPRAASPYGIDFPSGTPG 392
++LP PAPRA PYG+D P G
Sbjct: 12 DYLPAPAPRANRPYGMDLPGRPTG 83
Score = 35.4 bits (71), Expect(4) = 6e-034
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 419 LWAGGGGVEGGEVVAAAAEEEEGPR 345
Score = 30.4 bits (60), Expect(3) = 5e-025
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 346 RGPSSSSAAAATTSPPS 396
Score = 24.4 bits (47), Expect(4) = 6e-034
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEV 321
+ AGG EV AV G RRRQ V
Sbjct: 89 EAAGGPAGEVHAVRPVRPGRRRRQVV 12
>gb|CA029175.1|CA029175 HZ64G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ64G24
5-PRIME, mRNA sequence
Length = 418
Score = 197 bits (425), Expect = 1e-049
Identities = 78/135 (57%), Positives = 101/135 (74%)
Frame = +3 / +1
Query: 744 DAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQ 923
+A AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG CN ANS+AQ
Sbjct: 7 EAQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGECNQQANSLAQ 186
Query: 924 NFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAA 1103
FN LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V ACCGSGKLNA
Sbjct: 187 AFNGLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTACCGSGKLNAE 366
Query: 1104 VMCAQPNTTYCSDRD 1148
VMC+ P TT C D
Sbjct: 367 VMCSHPGTTACPAAD 411
Score = 138 bits (295), Expect = 1e-031
Identities = 71/130 (54%), Positives = 83/130 (63%)
Frame = -2 / -3
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 392 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 213
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VET 770
+LR L CA ELA LH PL M L PGV PI GTSRIP +RAP +A +C *V T
Sbjct: 212 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVT 33
Query: 769 MLLM*AGASC 740
+L A ASC
Sbjct: 32 ILTTYACASC 3
>gb|BF621492.1|BF621492 HVSMEa0011C21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011C21f, mRNA sequence
Length = 836
Score = 82.6 bits (174), Expect(4) = 2e-049
Identities = 36/83 (43%), Positives = 46/83 (55%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGAN+A
Sbjct: 273 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANHASGGSGILD 452
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q F K M
Sbjct: 453 TTGKGTLTMRTQDQYFKKAADNM 521
Score = 78.0 bits (164), Expect(4) = 1e-031
Identities = 42/83 (50%), Positives = 45/83 (54%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A LAPI G ER GLI
Sbjct: 520 MLSAAFLKYWSCVRIVSVPFPVVSRMPDPPEAWLAPILQRPSKILSCGSMERYGLGLISK 341
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 340 PRRCEMTSARL*PLVKRPVGLPG 272
Score = 72.1 bits (151), Expect(4) = 2e-049
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +3
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 84 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 263
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 264 MDLPGRPTG 290
Score = 61.6 bits (128), Expect(4) = 2e-049
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +3 / +2
Query: 753 AYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSR 872
AY+ MV+TY++HI ALY +GAR GILDVP G PG+R
Sbjct: 626 AYVVKMVTTYIEHIQALYDMGARMGGILDVPPNGARPGNR 745
Score = 57.4 bits (119), Expect(4) = 1e-021
Identities = 32/68 (47%), Positives = 39/68 (57%)
Frame = -1 / -1
Query: 590 RECPVSRGVENARSTRRVIGTNSAREQVKL*YRCQREVSRWTHLEPQTSRD*IGKVVAIR 411
RE P SRGVE+A ST V+G N A + L R EV HLE QT D +G+VVA+
Sbjct: 476 RERPFSRGVEDAGSTGSVVGANLAEAE*DLVVRQHGEVRLGAHLETQTL*DDVGEVVAVG 297
Query: 410 EPS*DGAG 387
E + AG
Sbjct: 296 EAAGGPAG 273
Score = 43.2 bits (88), Expect(4) = 1e-031
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 296 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 177
Score = 41.4 bits (84), Expect(4) = 1e-021
Identities = 24/64 (37%), Positives = 29/64 (45%)
Frame = -2 / -2
Query: 376 GKSMPYXXXXXXXXXXRKLLFPTSTSESPNTNIKGTDERFCSTSVSAAPKDERLAMHTRS 197
G+SMPY R L PTSTSESPNT T S +AA + T+
Sbjct: 274 GRSMPYGRFALGAGAGR*SLLPTSTSESPNTYTAFTSRPPFSPPAAAAVEAHTAPTRTKQ 95
Query: 196 TREM 185
+R M
Sbjct: 94 SRAM 83
Score = 37.3 bits (75), Expect(4) = 2e-049
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 549 LARSLFLLSGGGNDFSAF 602
Score = 37.3 bits (75), Expect(4) = 1e-031
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -2 / -3
Query: 871 LEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
L PG P GTSRIP +RAP A +C *V T+L
Sbjct: 744 LLPGRAPFGGTSRIPPMRAPMS*RA*MCSM*VVTIL 637
Score = 34.5 bits (69), Expect(4) = 1e-031
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -1 / -1
Query: 719 EGGEVIAAGADKEQGPR 669
EGGEV+AA A++E+GPR
Sbjct: 602 EGGEVVAAAAEEEEGPR 552
Score = 31.8 bits (63), Expect(4) = 1e-021
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1 / -2
Query: 842 HV*DPQPPCSQLVQRVDMLDIG*DHATDV 756
HV DP S +V+ +++LD+G DH DV
Sbjct: 715 HVEDPPHARSHVVEGLNVLDVGGDHLDDV 629
Score = 27.6 bits (54), Expect(4) = 1e-021
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 718 KAEKSLPPALIRNKD 674
KAEKSLPP L R +D
Sbjct: 601 KAEKSLPPPLRRKRD 557
>gb|CA023590.1|CA023590 HZ46L21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46L21
5-PRIME, mRNA sequence
Length = 534
Score = 150 bits (322), Expect(3) = 4e-049
Identities = 60/114 (52%), Positives = 81/114 (71%)
Frame = +3 / +2
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG C
Sbjct: 188 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGEC 367
Query: 897 NDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLR 1058
N ANS+AQ FN LL+ ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR
Sbjct: 368 NQQANSLAQAFNGLLKAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLR 529
Score = 95.5 bits (202), Expect(3) = 1e-033
Identities = 53/100 (53%), Positives = 61/100 (61%)
Frame = -2 / -1
Query: 1063 TTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFATSSLRSLLKFCAIELAASLHPPL 884
T SPAT LSI S+ L*+ A EYL M A A A+ +LR L CA ELA LH PL
Sbjct: 534 TCLSPATSELSIISLRML*LAATEYLSSFMVAAAASASLALRRPLNACARELACWLHSPL 355
Query: 883 AMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
M L PGV PI GTSRIP +RAP +A +C *V T+L
Sbjct: 354 GMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVTIL 235
Score = 83.1 bits (175), Expect(3) = 3e-026
Identities = 41/93 (44%), Positives = 47/93 (50%)
Frame = +1 / +3
Query: 757 TSVAWSQPMSSISTRCTSWEHGGWGS*TCQLSAVPQAPESPWPTADATTLPTLWRRTSTD 936
TS WS P SS S R T+WE WGS TC+ S + PTA AT+ PT WRR ST
Sbjct: 228 TSSRWSPPTSSTSRRSTTWERAWWGSSTCRRSGARRGRGPACPTASATSRPTPWRRRSTA 407
Query: 937 S*GSRWRKPSHPPCPA*DTPLQAPTILSPT*WT 1035
S +P PP + TP T S *WT
Sbjct: 408 SSRPSSPRPPPPP*RSSSTPSPPTTTSSTR*WT 506
Score = 51.5 bits (106), Expect(3) = 1e-033
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPI 524
+L+ F C VSVPFPVV RMPDPP+A*LAPI
Sbjct: 117 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPI 7
Score = 46.9 bits (96), Expect(3) = 4e-049
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +1
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 7 DWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEGGGQHDLLPKQ 135
Score = 43.7 bits (89), Expect(3) = 3e-026
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +1 / +3
Query: 520 AELVPITRLVDLAFSTPRETGHSRCKNKSRCSRK 621
A L P T VD A STPRE G SRC +KS SR+
Sbjct: 3 ARLAPTTLPVDPASSTPREKGRSRCGHKSSTSRR 104
Score = 37.3 bits (75), Expect(3) = 4e-049
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 146 LARSLFLLSGGGNDFSAF 199
Score = 35.4 bits (71), Expect(3) = 1e-033
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 223 LWAGGGGVEGGEVVAAAAEEEEGPR 149
Score = 30.4 bits (60), Expect(3) = 3e-026
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 150 RGPSSSSAAAATTSPPS 200
>gb|AL505426.1|AL505426 AL505426 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08G23V 5', mRNA sequence
Length = 682
Score = 87.7 bits (185), Expect(4) = 2e-048
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 150 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 329
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 330 TTGKGTLTMRTQVQYFKKAADNM 398
Score = 80.8 bits (170), Expect(4) = 7e-033
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 397 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 218
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 217 PRRCEMTSARL*PLVKRPVGLPG 149
Score = 68.9 bits (144), Expect(4) = 2e-048
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +3 / +3
Query: 234 AAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYGIDFPSGTPG 392
AA E V ++VFGDSLVDVGNN++LP PAPRA PYG+D P G
Sbjct: 9 AAAAGGENGGRXVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTG 167
Score = 60.6 bits (126), Expect(4) = 2e-021
Identities = 38/89 (42%), Positives = 45/89 (50%)
Frame = -1 / -3
Query: 653 LAAAPRHSCFSFREQRDLFLQRECPVSRGVENARSTRRVIGTNSAREQVKL*YRCQREVS 474
LA H E DL RE P SRGVE+A ST V+G N A + L R EV
Sbjct: 416 LAWVADHVVRRLLEVLDLCPHRERPFSRGVEDAGSTGSVVGANLAEAE*DLVVRQHGEVR 237
Query: 473 RWTHLEPQTSRD*IGKVVAIREPS*DGAG 387
HLE QT D +G+VVA+ E + AG
Sbjct: 236 LGAHLETQTL*DDVGEVVAVGEAAGGPAG 150
Score = 56.1 bits (116), Expect(4) = 2e-048
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +3 / +3
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVP 878
FS AY+ MV+TY++HI ALY +GAR +GILDVP G+ P
Sbjct: 468 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPDRVHAGAEGP 629
Score = 46.9 bits (96), Expect(5) = 7e-025
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +2
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 287 DWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEGGGQHDLLPKQ 415
Score = 45.1 bits (92), Expect(5) = 7e-025
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +1 / +1
Query: 757 TSVAWSQPMSSISTRCTSWEHGGWGS*TCQ 846
TS WS P SS S R T+WE WGS TC+
Sbjct: 508 TSSRWSPPTSSTSRRSTTWERAWWGSSTCR 597
Score = 43.2 bits (88), Expect(4) = 7e-033
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 173 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 54
Score = 41.8 bits (85), Expect(5) = 7e-025
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1 / +1
Query: 280 CLCSVIRWSMSETITSCRRLHPVLHLHTASTSLLAPPAPSQDGSRMATT 426
C CS RW T T+CRR P TA TS PPA S + T+
Sbjct: 55 CTCSATRWWTWATTTTCRRRRPGRTGRTAWTSPAGPPAASPTATTSPTS 201
Score = 37.7 bits (76), Expect(4) = 7e-033
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -1 / -3
Query: 842 HV*DPQPPCSQLVQRVDMLDIG*DHATDV 756
HV DP S +V+R+D+LD+G DH DV
Sbjct: 593 HVEDPHHARSHVVERLDVLDVGGDHLDDV 507
Score = 37.3 bits (75), Expect(4) = 2e-048
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 426 LARSLFLLSGGGNDFSAF 479
Score = 36.3 bits (73), Expect(4) = 2e-021
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = -2 / -1
Query: 376 GKSMPYXXXXXXXXXXRKLLFPTSTSESPNT 284
G+SMPY R L PTSTSESPNT
Sbjct: 151 GRSMPYGRFALGAGAGR*SLLPTSTSESPNT 59
Score = 35.4 bits (71), Expect(4) = 7e-033
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 503 LWAGGGGVEGGEVVAAAAEEEEGPR 429
Score = 32.7 bits (65), Expect(4) = 2e-021
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2 / -1
Query: 877 GTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
G P GTSRIP +RAP +A +C *V T+L
Sbjct: 628 GPSAPACTRSGGTSRIPTMRAPMS*SAWMCSM*VVTIL 515
Score = 30.4 bits (60), Expect(5) = 7e-025
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 430 RGPSSSSAAAATTSPPS 480
Score = 27.6 bits (54), Expect(4) = 2e-021
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 718 KAEKSLPPALIRNKD 674
KAEKSLPP L R +D
Sbjct: 478 KAEKSLPPPLRRKRD 434
Score = 22.1 bits (42), Expect(5) = 7e-025
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3 / +1
Query: 849 IGCTPGSR 872
IGCTPG R
Sbjct: 601 IGCTPGQR 624
>gb|BI959188.1|BI959188 HVSMEn0018I19f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0018I19f,
mRNA sequence
Length = 633
Score = 149 bits (320), Expect(2) = 3e-048
Identities = 60/108 (55%), Positives = 78/108 (72%)
Frame = +3 / +2
Query: 825 LGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIAS 1004
+G LDVP IGCTPG R M NG CN ANS+AQ FN LL+ ++A+A A++M ++ ++A+
Sbjct: 2 VGELDVPPIGCTPGQRAGMPNGECNQQANSLAQAFNGLLKAKLAEAAAATMKELKCAVAA 181
Query: 1005 TYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAAVMCAQPNTTYCSDRD 1148
YN + ++MD+ LVAGLR V ACCGSGKLNA VMC+ P TT C D
Sbjct: 182 NYNILNEMMDNSLVAGLRHVKTACCGSGKLNAEVMCSHPGTTACPAAD 325
Score = 107 bits (229), Expect(2) = 3e-031
Identities = 54/101 (53%), Positives = 63/101 (62%)
Frame = -2 / -1
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A +L M A A A+
Sbjct: 306 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATAHLSSFMVAAAASAS 127
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIP 827
+LR L CA ELA LH PL M L PGV PI GTS P
Sbjct: 126 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSSSP 4
Score = 63.8 bits (133), Expect(2) = 3e-048
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +2
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 320 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 406
Score = 48.3 bits (99), Expect(2) = 3e-031
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -1
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 405 P*KKATTPRWMVACVGWSMSQNM*SSWS 322
>gb|BI957037.1|BI957037 HVSMEn0007B14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007B14f, mRNA sequence
Length = 859
Score = 87.7 bits (185), Expect(5) = 1e-047
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 223 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 402
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 403 TTGKGTLTMRTQVQYFKKAADNM 471
Score = 80.8 bits (170), Expect(4) = 7e-031
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -3
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 470 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 291
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 290 PRRCEMTSARL*PLVKRPVGLPG 222
Score = 70.7 bits (148), Expect(5) = 1e-047
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+++ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 34 IAVLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 213
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 214 MDLPGRPTG 240
Score = 46.9 bits (96), Expect(5) = 2e-021
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +3
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 360 DWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEGGGQHDLLPKQ 488
Score = 43.2 bits (88), Expect(4) = 7e-031
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -2
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 246 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 127
Score = 41.8 bits (85), Expect(5) = 1e-047
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLG 830
FS AY+ MV+TY++HI ALY +GAR G
Sbjct: 541 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMGG 654
Score = 41.8 bits (85), Expect(5) = 2e-021
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1 / +2
Query: 280 CLCSVIRWSMSETITSCRRLHPVLHLHTASTSLLAPPAPSQDGSRMATT 426
C CS RW T T+CRR P TA TS PPA S + T+
Sbjct: 128 CTCSATRWWTWATTTTCRRRRPGRTGRTAWTSPAGPPAASPTATTSPTS 274
Score = 37.3 bits (75), Expect(5) = 1e-047
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 499 LARSLFLLSGGGNDFSAF 552
Score = 35.4 bits (71), Expect(4) = 7e-031
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -2
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 576 LWAGGGGVEGGEVVAAAAEEEEGPR 502
Score = 31.3 bits (62), Expect(5) = 2e-021
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 757 TSVAWSQPMSSISTRCTSWE 816
TS WS P SS S R T+WE
Sbjct: 581 TSSRWSPPTSSTSRRSTTWE 640
Score = 30.9 bits (61), Expect(4) = 7e-031
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1 / -2
Query: 815 SQLVQRVDMLDIG*DHATDV 756
S +V+R+D+LD+G DH DV
Sbjct: 639 SHVVERLDVLDVGGDHLDDV 580
Score = 30.4 bits (60), Expect(5) = 2e-021
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 670 RGPCSLSAPAAMTSPPS 720
RGP S SA AA TSPPS
Sbjct: 503 RGPSSSSAAAATTSPPS 553
Score = 27.6 bits (54), Expect(5) = 1e-047
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3 / +2
Query: 918 AQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVT 1022
AQ + + +A A +M ++YS+A+ Y F+T
Sbjct: 740 AQASTXFFKAKPPEAGAGTMKELKYSVAANYTFLT 844
Score = 23.5 bits (45), Expect(5) = 2e-021
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = +3 / +1
Query: 822 RLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNRLLRLEVAK 959
R+G A CTPG R S+ N LL+ + ++
Sbjct: 643 RMGGSSRAADRCTPGXRPACPTASATSKPTSLGAGVNGLLQGQASR 780
>gb|BI956693.1|BI956693 HVSMEn0004M24f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0004M24f,
mRNA sequence
Length = 917
Score = 172 bits (370), Expect(3) = 1e-047
Identities = 70/135 (51%), Positives = 92/135 (68%)
Frame = +3 / +2
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGC 896
FS AY+ MV+TY++HI ALY +GAR +GILDVP IGCTPG R M NG C
Sbjct: 188 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGEC 367
Query: 897 NDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRAC 1076
N ANS+AQ FN LL+ ++A+A A++M ++YS+ + YN + ++MD+ LVAGLR V AC
Sbjct: 368 NQQANSLAQAFNGLLKAKLAEAAAATMKELKYSVGANYNILNEMMDNSLVAGLRHVKTAC 547
Query: 1077 CGSGKLNAAVMCAQP 1121
CGS KLN V + P
Sbjct: 548 CGSRKLNPEVSVSHP 592
Score = 114 bits (244), Expect(3) = 2e-031
Identities = 60/119 (50%), Positives = 72/119 (60%)
Frame = -2 / -3
Query: 1120 GWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFATSSL 941
GW +T+ SF +PQ A+ T SPAT LSI S+ L*+ EYL M A A A+ +L
Sbjct: 591 GWLTLTSGLSFREPQQAVFTCLSPATSELSIISLRML*LAPTEYLSSFMVAAAASASLAL 412
Query: 940 RSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETML 764
R L CA ELA LH PL M L PGV PI GTSRIP +RAP +A +C *V T+L
Sbjct: 411 RRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*VVTIL 235
Score = 32.7 bits (65), Expect(3) = 1e-047
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GG +FSAF
Sbjct: 146 LARSLFLLSGGGGEFSAF 199
Score = 31.3 bits (62), Expect(3) = 2e-031
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1 / -2
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGE+ AA A++E+GPR
Sbjct: 223 LWAGGGGVEGGELPAAAAEEEEGPR 149
Score = 28.6 bits (56), Expect(3) = 2e-031
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / -1
Query: 574 PVVLRMPDPP 545
PVVLRMPDPP
Sbjct: 56 PVVLRMPDPP 27
Score = 24.4 bits (47), Expect(3) = 1e-047
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +3
Query: 548 WIWHSQHHGKR 580
WI H QHHG +
Sbjct: 30 WIRHPQHHGXK 62
>gb|BQ754289.1|BQ754289 EBca01_SQ003_H09_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ003_H09 5', mRNA sequence
Length = 672
Score = 143 bits (307), Expect(2) = 2e-046
Identities = 57/100 (57%), Positives = 72/100 (72%)
Frame = +3 / +1
Query: 849 IGCTPGSRVPMANGGCNDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDL 1028
IGCTPG R M NG CN ANS+AQ FN LLR ++A+A A++M ++YS+A+ YN + ++
Sbjct: 4 IGCTPGQRAGMPNGECNQQANSLAQAFNGLLRAKLAEAAAATMKELKYSVAANYNILNEM 183
Query: 1029 MDSHLVAGLRVVDRACCGSGKLNAAVMCAQPNTTYCSDRD 1148
MD+ LV GLR V ACCGSGKLNA VMC+ P TT C D
Sbjct: 184 MDNSLVTGLRHVKTACCGSGKLNAEVMCSHPGTTACPAAD 303
Score = 99.6 bits (211), Expect(2) = 1e-028
Identities = 50/94 (53%), Positives = 58/94 (61%)
Frame = -2 / -2
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SP T LSI S+ L*+ A EYL M A A A+
Sbjct: 284 VVPGWLHITSALSFPEPQHAVFTCLSPVTSELSIISLRML*LAATEYLSSFMVAAAASAS 105
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPI 848
+LR L CA ELA LH PL M PGV PI
Sbjct: 104 LALRRPLNACARELACWLHSPLGMPARCPGVHPI 3
Score = 63.8 bits (133), Expect(2) = 2e-046
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +1
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 298 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 384
Score = 48.3 bits (99), Expect(2) = 1e-028
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 383 P*KKATTPRWMVACVGWSMSQNM*SSWS 300
>gb|BG300532.2|BG300532 HVSMEb0017G05f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017G05f, mRNA sequence
Length = 882
Score = 88.1 bits (186), Expect(4) = 3e-046
Identities = 41/108 (37%), Positives = 53/108 (49%)
Frame = +3 / +2
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 257 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 436
Query: 567 XXXXXXXXXQKQITLFSKTKARMSWGRCKLSSMVSRSLFLISAGGNDF 710
+ Q+ F K M K + L G + F
Sbjct: 437 TTGKGTLTMRTQVQYFKKGAGNMICYPSKEEHLARSLFLLSGGGNDFF 580
Score = 79.9 bits (168), Expect(3) = 1e-024
Identities = 41/72 (56%), Positives = 42/72 (58%)
Frame = -2 / -1
Query: 601 CFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILNPRRRATKSARL 422
C VSVPFPVV RMPDPP+A*LAPI G ER GLI PRR SARL
Sbjct: 471 CVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISKPRRCEMTSARL 292
Query: 421 *PFVNRPETAPG 386
*P V RP PG
Sbjct: 291 *PLVKRPVGLPG 256
Score = 72.1 bits (151), Expect(4) = 3e-046
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +2
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 68 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 247
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 248 MDLPGRPTG 274
Score = 55.6 bits (115), Expect(4) = 3e-046
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +3 / +3
Query: 711 SAFSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGARRLGILDVPAIG 854
+ FS + AY+ MV+TY H+ ALY +GAR +GILDVP IG
Sbjct: 570 TTFSALDPSTGSPQAYVVEMVTTYFGHMQALYDMGARMVGILDVPPIG 713
Score = 46.4 bits (95), Expect(4) = 2e-022
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +1
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 394 DWRQLRFRWIRHPRHHGKRDAHDADTSSVL*EGRGQHDLLPKQ 522
Score = 43.2 bits (88), Expect(3) = 1e-024
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 280 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 161
Score = 41.8 bits (85), Expect(4) = 2e-022
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +1 / +1
Query: 757 TSVAWSQPMSSISTRCTSWEHGGWGS*TCQLS 852
TS WS P S R T+WE WGS TC+ S
Sbjct: 616 TSSRWSPPTSGTCRRSTTWERAWWGSSTCRRS 711
Score = 41.8 bits (85), Expect(4) = 2e-022
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1 / +3
Query: 280 CLCSVIRWSMSETITSCRRLHPVLHLHTASTSLLAPPAPSQDGSRMATT 426
C CS RW T T+CRR P TA TS PPA S + T+
Sbjct: 162 CTCSATRWWTWATTTTCRRRRPGRTGRTAWTSPAGPPAASPTATTSPTS 308
Score = 35.0 bits (70), Expect(3) = 1e-024
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -2 / -3
Query: 853 PIAGTSRIPNLRAPNLYNASICWT*VETM 767
PI GTSRIP +RAP +A +C *V T+
Sbjct: 712 PIGGTSRIPTMRAPMS*SACMCPK*VVTI 626
Score = 30.9 bits (61), Expect(4) = 2e-022
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDF 710
++RSLFL+S GGNDF
Sbjct: 533 LARSLFLLSGGGNDF 577
Score = 26.7 bits (52), Expect(4) = 3e-046
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3 / +3
Query: 879 MANGGCNDAANSMAQNFNRLLR 944
+A+G CN ANS+AQ L+R
Sbjct: 735 LAHGECNQQANSLAQA*KGLVR 800
>gb|BI957027.1|BI957027 HVSMEn0007B02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007B02f, mRNA sequence
Length = 870
Score = 86.3 bits (182), Expect(4) = 5e-045
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 231 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 410
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q F K M
Sbjct: 411 TTGKGTLTMRTQFQYFKKAADNM 479
Score = 62.5 bits (130), Expect(4) = 5e-045
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +3 / +1
Query: 756 YISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNR 935
Y+ +MV+TY++HI ALY +G + ILD+P IGC PG +A + +AQ FN
Sbjct: 589 YVFNMVTTYIEHILALYYMGTSMVWILDLPPIGCPPGQMASLAEWRLHP*GKLLAQAFNG 768
Query: 936 L 938
L
Sbjct: 769 L 771
Score = 61.6 bits (128), Expect(4) = 5e-045
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3 / +3
Query: 282 FVFGDSLVDVGNNNFLPPPAPRAASPYGIDFPSGTPG 392
++F DSLVDVGNNN+LP PAP A PYG+D P G
Sbjct: 138 YLFXDSLVDVGNNNYLPAPAPSANRPYGMDLPGRPTG 248
Score = 28.1 bits (55), Expect(4) = 5e-045
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S+GGN F F
Sbjct: 507 LARSLFLLSSGGNYFFDF 560
>gb|BQ764714.1|BQ764714 EBca01_SQ004_N14_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_N14 5', mRNA sequence
Length = 694
Score = 87.7 bits (185), Expect(4) = 3e-044
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +2
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 275 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 454
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 455 TTGKGTLTMRTQVQYFKKAADNM 523
Score = 80.8 bits (170), Expect(4) = 1e-031
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 522 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 343
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 342 PRRCEMTSARL*PLVKRPVGLPG 274
Score = 72.1 bits (151), Expect(4) = 3e-044
Identities = 32/69 (46%), Positives = 40/69 (57%)
Frame = +3 / +2
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 86 IALLCFVFVVGLVGTAAAAVGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 265
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 266 MDLPGRPTG 292
Score = 43.2 bits (88), Expect(4) = 1e-031
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 298 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 179
Score = 39.1 bits (79), Expect(4) = 3e-044
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3 / +2
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGA 818
FS AY+ MV+TY++HI ALY +GA
Sbjct: 593 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGA 694
Score = 37.3 bits (75), Expect(4) = 3e-044
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 551 LARSLFLLSGGGNDFSAF 604
Score = 35.4 bits (71), Expect(4) = 1e-031
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 628 LWAGGGGVEGGEVVAAAAEEEEGPR 554
Score = 33.6 bits (67), Expect(4) = 1e-031
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 815 SQLVQRVDMLDIG*DHATDVG 753
S +V+R+D+LD+G DH DVG
Sbjct: 691 SHVVERLDVLDVGGDHLDDVG 629
>gb|CA020509.1|CA020509 HZ36I10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36I10
5-PRIME, mRNA sequence
Length = 609
Score = 87.7 bits (185), Expect(4) = 9e-044
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 187 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 366
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 367 TTGKGTLTMRTQVQYFKKAADNM 435
Score = 80.8 bits (170), Expect(4) = 7e-031
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 434 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 255
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 254 PRRCEMTSARL*PLVKRPVGLPG 186
Score = 68.0 bits (142), Expect(4) = 9e-044
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +3 / +1
Query: 234 AAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYGIDFPSGTPG 392
AA E V ++VFGDSLVDVGNN++LP PAPRA PYG+D P G
Sbjct: 46 AAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTG 204
Score = 43.2 bits (88), Expect(4) = 7e-031
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 210 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 91
Score = 41.4 bits (84), Expect(4) = 9e-044
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKLGAR 821
FS AY+ MV+TY++HI ALY +GAR
Sbjct: 505 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDMGAR 609
Score = 37.3 bits (75), Expect(4) = 9e-044
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 463 LARSLFLLSGGGNDFSAF 516
Score = 35.4 bits (71), Expect(4) = 7e-031
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 540 LWAGGGGVEGGEVVAAAAEEEEGPR 466
Score = 30.9 bits (61), Expect(4) = 7e-031
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1 / -1
Query: 815 SQLVQRVDMLDIG*DHATDV 756
S +V+R+D+LD+G DH DV
Sbjct: 603 SHVVERLDVLDVGGDHLDDV 544
>gb|BM376151.2|BM376151 EBma01_SQ002_I03_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ002_I03 5', mRNA sequence
Length = 515
Score = 134 bits (287), Expect(2) = 9e-044
Identities = 54/96 (56%), Positives = 69/96 (71%)
Frame = +3 / +3
Query: 861 PGSRVPMANGGCNDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSH 1040
PG R M NG CN ANS+AQ FN LLR ++A+A A++M ++YS+A+ YN + ++MD+
Sbjct: 3 PGQRAGMPNGECNQQANSLAQAFNGLLRAKLAEAAAATMKELKYSVAANYNILNEMMDNS 182
Query: 1041 LVAGLRVVDRACCGSGKLNAAVMCAQPNTTYCSDRD 1148
LVAGLR V ACCGSGKLNA VMC+ P TT C D
Sbjct: 183 LVAGLRHVKTACCGSGKLNAEVMCSHPGTTACPAAD 290
Score = 94.5 bits (200), Expect(2) = 3e-027
Identities = 48/90 (53%), Positives = 56/90 (62%)
Frame = -2 / -2
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 271 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 92
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPG 860
+LR L CA ELA LH PL M PG
Sbjct: 91 LALRRPLNACARELACWLHSPLGMPARCPG 2
Score = 63.8 bits (133), Expect(2) = 9e-044
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +3
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 285 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 371
Score = 48.3 bits (99), Expect(2) = 3e-027
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 370 P*KKATTPRWMVACVGWSMSQNM*SSWS 287
>gb|BF629361.2|BF629361 HVSMEb0010P14f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010P14f, mRNA sequence
Length = 732
Score = 88.6 bits (187), Expect(4) = 3e-043
Identities = 41/109 (37%), Positives = 54/109 (49%)
Frame = +3 / +2
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 263 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 442
Query: 567 XXXXXXXXXQKQITLFSKTKARMSWGRCKLSSMVSRSLFLISAGGNDFS 713
+ Q+ F K M K + L G + F+
Sbjct: 443 TTGKGTLTMRTQVQYFKKAADNMICYPSKEEHLARSLFLLSGGGNDFFA 589
Score = 80.8 bits (170), Expect(4) = 9e-029
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 510 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 331
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 330 PRRCEMTSARL*PLVKRPVGLPG 262
Score = 72.1 bits (151), Expect(4) = 3e-043
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +2
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 74 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 253
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 254 MDLPGRPTG 280
Score = 46.9 bits (96), Expect(5) = 3e-021
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2 / +1
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTNHAVLEN*SKNVVGPLQ 652
+W QLR WI H +HHGKRD H A T+ + E ++ + P Q
Sbjct: 400 DWRQLRFRWIRHPRHHGKRDAHDADTSPVLQEGGGQHDLLPKQ 528
Score = 43.2 bits (88), Expect(4) = 9e-029
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 286 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 167
Score = 41.8 bits (85), Expect(5) = 3e-021
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +1 / +3
Query: 280 CLCSVIRWSMSETITSCRRLHPVLHLHTASTSLLAPPAPSQDGSRMATT 426
C CS RW T T+CRR P TA TS PPA S + T+
Sbjct: 168 CTCSATRWWTWATTTTCRRRRPGRTGRTAWTSPAGPPAASPTATTSPTS 314
Score = 38.6 bits (78), Expect(4) = 3e-043
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3 / +3
Query: 804 YKLGARRLGILDVPAIGCTPG 866
Y +GAR +GIL +P IGCTPG
Sbjct: 669 YDMGARMVGILYLPPIGCTPG 731
Score = 34.5 bits (69), Expect(5) = 3e-021
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDF AF
Sbjct: 539 LARSLFLLSGGGNDFFAF 592
Score = 33.1 bits (66), Expect(4) = 3e-043
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3 / +2
Query: 753 AYISSMVSTYVQHIDALYKLGARRLG 830
AY+ MV+TY++HI AL + G+ G
Sbjct: 617 AYVCKMVTTYIEHIQALLRHGSAHGG 694
Score = 31.8 bits (63), Expect(4) = 9e-029
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 865 PGVQPIAGTSRIPNLRAP 812
PGV PI G RIP +RAP
Sbjct: 730 PGVHPIGGR*RIPTMRAP 677
Score = 27.2 bits (53), Expect(4) = 9e-029
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 803 QRVDMLDIG*DHATDVG 753
+R+D+LD+G DH +VG
Sbjct: 667 KRLDVLDVGGDHLANVG 617
Score = 26.7 bits (52), Expect(5) = 3e-021
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1 / +1
Query: 805 TSWEHGGWGS*TCQLS 852
T+WE WGS TC S
Sbjct: 670 TTWERAWWGSSTCPRS 717
Score = 23.5 bits (45), Expect(5) = 3e-021
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 751 QPTSVAWSQPMSSISTR 801
+PT WS P SS S R
Sbjct: 615 RPTFARWSPPTSSTSRR 665
>gb|BI958741.1|BI958741 HVSMEn0016G17f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016G17f,
mRNA sequence
Length = 621
Score = 175 bits (377), Expect = 5e-043
Identities = 71/129 (55%), Positives = 91/129 (70%)
Frame = +3 / +1
Query: 801 LYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNRLLRLEVAKAVASSMP 980
LY +GAR +GILDVP IGCTPG R M NG CN ANS+AQ FN LL+ ++A+A A++M
Sbjct: 1 LYDMGARMVGILDVPPIGCTPGQRAGMPNGECNQQANSLAQAFNGLLKAKLAEAAAATMK 180
Query: 981 GMRYSIASTYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAAVMCAQPNTTYCSDRDDYMF 1160
++YS+A+ YN + ++MD+ LVAGLR V ACCGSGKLNA VMC+ P TT C D +
Sbjct: 181 ELKYSVAANYNILNEMMDNSLVAGLRHVKTACCGSGKLNAEVMCSHPGTTACPAADPRLM 360
Query: 1161 WDMLHPTQA 1187
+ PT A
Sbjct: 361 FXTCSPTHA 387
Score = 126 bits (270), Expect = 3e-028
Identities = 61/106 (57%), Positives = 70/106 (66%)
Frame = -2 / -2
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 329 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 150
Query: 949 SSLRSLLKFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAP 812
+LR L CA ELA LH PL M L PGV PI GTSRIP +RAP
Sbjct: 149 LALRRPLNACARELACWLHSPLGMPALCPGVHPIGGTSRIPTMRAP 12
>gb|CA028294.1|CA028294 HZ61I24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61I24
5-PRIME, mRNA sequence
Length = 675
Score = 87.7 bits (185), Expect(4) = 6e-043
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +2
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 260 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 439
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 440 TTGKGTLTMRTQVQYFKKAADNM 508
Score = 80.8 bits (170), Expect(4) = 2e-030
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 507 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 328
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 327 PRRCEMTSARL*PLVKRPVGLPG 259
Score = 72.1 bits (151), Expect(4) = 6e-043
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +2
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 71 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 250
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 251 MDLPGRPTG 277
Score = 43.2 bits (88), Expect(4) = 2e-030
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 283 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 164
Score = 37.3 bits (75), Expect(4) = 6e-043
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 536 LARSLFLLSGGGNDFSAF 589
Score = 35.4 bits (71), Expect(4) = 2e-030
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 613 LWAGGGGVEGGEVVAAAAEEEEGPR 539
Score = 34.5 bits (69), Expect(4) = 6e-043
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3 / +2
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKL 812
FS AY+ MV+TY++HI ALY +
Sbjct: 578 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDM 673
Score = 29.0 bits (57), Expect(4) = 2e-030
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1 / -3
Query: 809 LVQRVDMLDIG*DHATDV 756
+V+R+D+LD+G DH DV
Sbjct: 670 VVERLDVLDVGGDHLDDV 617
>gb|BU998577.1|BU998577 HI11H24r HI Hordeum vulgare subsp. vulgare cDNA clone HI11H24
5-PRIME, mRNA sequence
Length = 639
Score = 87.7 bits (185), Expect(4) = 6e-043
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 226 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 405
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 406 TTGKGTLTMRTQVQYFKKAADNM 474
Score = 80.8 bits (170), Expect(4) = 2e-030
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 473 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 294
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 293 PRRCEMTSARL*PLVKRPVGLPG 225
Score = 72.1 bits (151), Expect(4) = 6e-043
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 37 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 216
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 217 MDLPGRPTG 243
Score = 43.2 bits (88), Expect(4) = 2e-030
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 249 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 130
Score = 37.3 bits (75), Expect(4) = 6e-043
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 502 LARSLFLLSGGGNDFSAF 555
Score = 35.4 bits (71), Expect(4) = 2e-030
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 579 LWAGGGGVEGGEVVAAAAEEEEGPR 505
Score = 34.5 bits (69), Expect(4) = 6e-043
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALYKL 812
FS AY+ MV+TY++HI ALY +
Sbjct: 544 FSAFDPSTASPQAYVVKMVTTYIEHIQALYDM 639
Score = 29.0 bits (57), Expect(4) = 2e-030
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1 / -1
Query: 809 LVQRVDMLDIG*DHATDV 756
+V+R+D+LD+G DH DV
Sbjct: 636 VVERLDVLDVGGDHLDDV 583
>gb|BI781057.2|BI781057 EBma03_SQ001_E15_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ001_E15 5', mRNA sequence
Length = 535
Score = 131 bits (280), Expect(2) = 8e-043
Identities = 53/95 (55%), Positives = 68/95 (71%)
Frame = +3 / +2
Query: 864 GSRVPMANGGCNDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHL 1043
G R M NG CN ANS+AQ FN LLR ++A+A A++M ++YS+A+ YN + ++MD+ L
Sbjct: 2 GQRAGMPNGECNQQANSLAQAFNGLLRAKLAEAAAATMKELKYSVAANYNILNEMMDNSL 181
Query: 1044 VAGLRVVDRACCGSGKLNAAVMCAQPNTTYCSDRD 1148
VAGLR V ACCGSGKLNA VMC+ P TT C D
Sbjct: 182 VAGLRHVKTACCGSGKLNAEVMCSHPGTTACPAAD 286
Score = 92.3 bits (195), Expect(2) = 1e-026
Identities = 46/84 (54%), Positives = 54/84 (64%)
Frame = -2 / -2
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 267 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 88
Query: 949 SSLRSLLKFCAIELAASLHPPLAM 878
+LR L CA ELA LH PL M
Sbjct: 87 LALRRPLNACARELACWLHSPLGM 16
Score = 63.8 bits (133), Expect(2) = 8e-043
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +2
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 281 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 367
Score = 48.3 bits (99), Expect(2) = 1e-026
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -2
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 366 P*KKATTPRWMVACVGWSMSQNM*SSWS 283
>gb|BQ739796.1|BQ739796 HB03B08 HB Hordeum vulgare subsp. vulgare cDNA clone HB03B08
similar to NP_198322.1| (NM_122861) putative protein
[Arabidopsis thaliana], mRNA sequence
Length = 672
Score = 87.7 bits (185), Expect(4) = 1e-042
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 265 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 444
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 445 TTGKGTLTMRTQVQYFKKAADNM 513
Score = 80.8 bits (170), Expect(4) = 4e-029
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 512 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 333
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 332 PRRCEMTSARL*PLVKRPVGLPG 264
Score = 72.1 bits (151), Expect(4) = 1e-042
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 76 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 255
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 256 MDLPGRPTG 282
Score = 43.2 bits (88), Expect(4) = 4e-029
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 288 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 169
Score = 37.3 bits (75), Expect(4) = 1e-042
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 541 LARSLFLLSGGGNDFSAF 594
Score = 33.1 bits (66), Expect(4) = 1e-042
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALY 806
FS AY+ MV+TY++HI ALY
Sbjct: 583 FSAFDPSTASPQAYVVKMVTTYIEHIRALY 672
Score = 33.1 bits (66), Expect(4) = 4e-029
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+A A++E+GPR
Sbjct: 618 LWAGGGGVEGGEVVAPAAEEEEGPR 544
Score = 27.2 bits (53), Expect(4) = 4e-029
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 806 VQRVDMLDIG*DHATDV 756
V+R D+LD+G DH DV
Sbjct: 672 VERPDVLDVGGDHLDDV 622
>gb|BQ739930.1|BQ739930 HB05C05 HB Hordeum vulgare subsp. vulgare cDNA clone HB05C05
similar to NP_198322.1| (NM_122861) putative protein
[Arabidopsis thaliana], mRNA sequence
Length = 672
Score = 87.7 bits (185), Expect(4) = 1e-042
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 265 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 444
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 445 TTGKGTLTMRTQVQYFKKAADNM 513
Score = 80.8 bits (170), Expect(4) = 4e-029
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 512 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 333
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 332 PRRCEMTSARL*PLVKRPVGLPG 264
Score = 72.1 bits (151), Expect(4) = 1e-042
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 76 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 255
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 256 MDLPGRPTG 282
Score = 43.2 bits (88), Expect(4) = 4e-029
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 288 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 169
Score = 37.3 bits (75), Expect(4) = 1e-042
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 541 LARSLFLLSGGGNDFSAF 594
Score = 33.1 bits (66), Expect(4) = 1e-042
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDALY 806
FS AY+ MV+TY++HI ALY
Sbjct: 583 FSAFDPSTASPQAYVVKMVTTYIEHIRALY 672
Score = 33.1 bits (66), Expect(4) = 4e-029
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+A A++E+GPR
Sbjct: 618 LWAGGGGVEGGEVVAPAAEEEEGPR 544
Score = 27.2 bits (53), Expect(4) = 4e-029
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 806 VQRVDMLDIG*DHATDV 756
V+R D+LD+G DH DV
Sbjct: 672 VERPDVLDVGGDHLDDV 622
>gb|BM370467.2|BM370467 EBro08_SQ004_F03_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_F03 5', mRNA sequence
Length = 677
Score = 87.7 bits (185), Expect(4) = 5e-042
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 271 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 450
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 451 TTGKGTLTMRTQVQYFKKAADNM 519
Score = 80.8 bits (170), Expect(4) = 9e-031
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 518 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 339
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 338 PRRCEMTSARL*PLVKRPVGLPG 270
Score = 72.1 bits (151), Expect(4) = 5e-042
Identities = 32/69 (46%), Positives = 40/69 (57%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 82 IALLCFVFVVGLVGTAAAAVGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 261
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 262 MDLPGRPTG 288
Score = 43.2 bits (88), Expect(4) = 9e-031
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 294 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 175
Score = 37.3 bits (75), Expect(4) = 5e-042
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 547 LARSLFLLSGGGNDFSAF 600
Score = 36.3 bits (73), Expect(4) = 9e-031
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 624 LWAGGGXVEGGEVVAAAAEEEEGPR 550
Score = 31.3 bits (62), Expect(4) = 5e-042
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDAL 803
FS AY+ MV+TY++HI AL
Sbjct: 589 FSAFDXSTASPQAYVVKMVTTYIEHIQAL 675
Score = 29.5 bits (58), Expect(4) = 9e-031
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 803 QRVDMLDIG*DHATDVG 753
+R+D+LD+G DH DVG
Sbjct: 675 ERLDVLDVGGDHLDDVG 625
>gb|BQ766550.1|BQ766550 EBro08_SQ006_M08_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_M08 5', mRNA sequence
Length = 656
Score = 87.7 bits (185), Expect(4) = 7e-042
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 235 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 414
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 415 TTGKGTLTMRTQVQYFKKAADNM 483
Score = 80.8 bits (170), Expect(4) = 1e-029
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 482 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 303
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 302 PRRCEMTSARL*PLVKRPVGLPG 234
Score = 72.1 bits (151), Expect(4) = 7e-042
Identities = 32/69 (46%), Positives = 40/69 (57%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 46 IALLCFVFVVGLVGTAAAAVGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 225
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 226 MDLPGRPTG 252
Score = 43.2 bits (88), Expect(4) = 1e-029
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 258 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 139
Score = 37.3 bits (75), Expect(4) = 7e-042
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 511 LARSLFLLSGGGNDFSAF 564
Score = 35.4 bits (71), Expect(4) = 1e-029
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 588 LWAGGGGVEGGEVVAAAAEEEEGPR 514
Score = 30.9 bits (61), Expect(4) = 7e-042
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHIDAL 803
FS AY+ MV+TY++HI AL
Sbjct: 553 FSAFDPSTASPQAYVVKMVTTYIEHIQAL 639
Score = 26.3 bits (51), Expect(4) = 1e-029
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 797 VDMLDIG*DHATDVG 753
+D+LD+G DH DVG
Sbjct: 633 LDVLDVGGDHLDDVG 589
>gb|AV910070.1|AV910070 AV910070 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak2p18 5', mRNA sequence
Length = 613
Score = 127 bits (271), Expect(2) = 1e-041
Identities = 51/90 (56%), Positives = 66/90 (73%)
Frame = +3 / +1
Query: 879 MANGGCNDAANSMAQNFNRLLRLEVAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLR 1058
M NG CN ANS+AQ FN LLR ++A+A A++M ++YS+A+ YN + ++MD+ LVAGLR
Sbjct: 7 MPNGECNQQANSLAQAFNGLLRAKLAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLR 186
Query: 1059 VVDRACCGSGKLNAAVMCAQPNTTYCSDRD 1148
V ACCGSGKLNA VMC+ P TT C D
Sbjct: 187 HVKTACCGSGKLNAEVMCSHPGTTACPAAD 276
Score = 92.3 bits (195), Expect(2) = 1e-026
Identities = 46/84 (54%), Positives = 54/84 (64%)
Frame = -2 / -3
Query: 1129 VVFGWAHMTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFAT 950
VV GW H+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+
Sbjct: 257 VVPGWLHITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASAS 78
Query: 949 SSLRSLLKFCAIELAASLHPPLAM 878
+LR L CA ELA LH PL M
Sbjct: 77 LALRRPLNACARELACWLHSPLGM 6
Score = 63.8 bits (133), Expect(2) = 1e-041
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +3 / +1
Query: 1137 SDRDDYMFWDMLHPTQATNERGVVAIFYG 1223
+D DDYMFWDMLHPT AT +RGVVA FYG
Sbjct: 271 ADHDDYMFWDMLHPTHATIQRGVVAFFYG 357
Score = 48.3 bits (99), Expect(2) = 1e-026
Identities = 23/28 (82%), Positives = 23/28 (82%)
Frame = -2 / -3
Query: 1222 P*KMATTPRSFVACVGCSMSQNM*SSRS 1139
P*K ATTPR VACVG SMSQNM*SS S
Sbjct: 356 P*KKATTPRWMVACVGWSMSQNM*SSWS 273
>gb|BM440810.2|BM440810 EBca01_SQ001_A23_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ001_A23 5', mRNA sequence
Length = 338
Score = 170 bits (365), Expect = 2e-041
Identities = 68/112 (60%), Positives = 87/112 (77%)
Frame = +3 / +1
Query: 771 VSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFNRLLRLE 950
V+TY++HI ALY +GAR +GILDVP IGCTPG R M NG CN ANS+AQ FN LLR +
Sbjct: 1 VTTYIEHIQALYDMGARMVGILDVPPIGCTPGQRAGMPNGECNQQANSLAQAFNGLLRAK 180
Query: 951 VAKAVASSMPGMRYSIASTYNFVTDLMDSHLVAGLRVVDRACCGSGKLNAAV 1106
+A+A A++M ++YS+A+ YN + ++MD+ LVAGLR V ACCGSGKLNA V
Sbjct: 181 LAEAAAATMKELKYSVAANYNILNEMMDNSLVAGLRHVKTACCGSGKLNAEV 336
Score = 113 bits (241), Expect = 3e-024
Identities = 59/111 (53%), Positives = 70/111 (63%)
Frame = -2 / -1
Query: 1108 MTAAFSFPDPQHALSTTRSPATRWLSIKSVTKL*VLAMEYLMPGMEDATAFATSSLRSLL 929
+T+A SFP+PQHA+ T SPAT LSI S+ L*+ A EYL M A A A+ +LR L
Sbjct: 338 ITSALSFPEPQHAVFTCLSPATSELSIISLRML*LAATEYLSSFMVAAAASASLALRRPL 159
Query: 928 KFCAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*V 776
CA ELA LH PL M PGV PI GTSRIP +RAP +A +C *V
Sbjct: 158 NACARELACWLHSPLGMPARCPGVHPIGGTSRIPTMRAPMS*SAWMCSM*V 6
>gb|BF256101.2|BF256101 HVSMEf0008L23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008L23f, mRNA sequence
Length = 798
Score = 90.9 bits (192), Expect(3) = 6e-041
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = +3 / +3
Query: 753 AYISSMVSTYVQHIDALYKLGARRLGILDVPAIGCTPGSRVPMANGGCNDAANSMAQNFN 932
AY+ MV+TY++H+ ALY +GAR +GILDVP IGCTP R M NG C+ AN + +N
Sbjct: 396 AYVGKMVTTYMEHMQALYDMGARMVGILDVPTIGCTPWQRAGMPNGECSQEANCLTHAWN 575
Query: 933 RLLRLEVAKA 962
LL+ ++ +A
Sbjct: 576 GLLKGKLGEA 605
Score = 85.8 bits (181), Expect(3) = 6e-041
Identities = 40/106 (37%), Positives = 52/106 (49%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 42 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 221
Query: 567 XXXXXXXXXQKQITLFSKTKARMSWGRCKLSSMVSRSLFLISAGGN 704
+ Q+ K M K + L L G +
Sbjct: 222 TTGKGTLTMRTQVQYLKKAADNMICYPSKEEHLARSLLLLSGGGND 359
Score = 80.8 bits (170), Expect(2) = 4e-024
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -3
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 289 MLSAAFFKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 110
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 109 PRRCEMTSARL*PLVKRPVGLPG 41
Score = 55.1 bits (114), Expect(2) = 4e-024
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = -2 / -3
Query: 922 CAIELAASLHPPLAMGTLEPGVQPIAGTSRIPNLRAPNLYNASICWT*VETM 767
C +LA+ LH PL + L GV PI GTSRIP +RAP +A +C *V T+
Sbjct: 565 CVRQLASWLHSPLGIPALCHGVHPIVGTSRIPTMRAPMS*SACMCSM*VVTI 410
Score = 30.4 bits (60), Expect(3) = 6e-041
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 336 PAPRAASPYGIDFPSGTPG 392
PAPRA PYG+D P G
Sbjct: 3 PAPRANRPYGMDLPGRPTG 59
>gb|BI958385.1|BI958385 HVSMEn0014L20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014L20f, mRNA sequence
Length = 654
Score = 87.7 bits (185), Expect(4) = 2e-040
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 259 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 438
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 439 TTGKGTLTMRTQVQYFKKAADNM 507
Score = 80.8 bits (170), Expect(3) = 6e-027
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 506 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 327
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 326 PRRCEMTSARL*PLVKRPVGLPG 258
Score = 72.1 bits (151), Expect(4) = 2e-040
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 70 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 249
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 250 MDLPGRPTG 276
Score = 43.2 bits (88), Expect(3) = 6e-027
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 282 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 163
Score = 37.3 bits (75), Expect(4) = 2e-040
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 535 LARSLFLLSGGGNDFSAF 588
Score = 35.4 bits (71), Expect(3) = 6e-027
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 612 LWAGGGGVEGGEVVAAAAEEEEGPR 538
Score = 25.8 bits (50), Expect(4) = 2e-040
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQHI 794
FS AY+ MV+TY++H+
Sbjct: 577 FSAFDPSTASPQAYVVKMVTTYIEHM 654
>gb|CB882801.1|CB882801 HL02O03w HL Hordeum vulgare subsp. vulgare cDNA clone HL02O03
3-PRIME, mRNA sequence
Length = 663
Score = 87.7 bits (185), Expect(4) = 3e-040
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 271 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 450
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 451 TTGKGTLTMRTQVQYFKKAADNM 519
Score = 80.8 bits (170), Expect(3) = 6e-027
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -2
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 518 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 339
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 338 PRRCEMTSARL*PLVKRPVGLPG 270
Score = 72.1 bits (151), Expect(4) = 3e-040
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 82 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 261
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 262 MDLPGRPTG 288
Score = 43.2 bits (88), Expect(3) = 6e-027
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -1
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 294 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 175
Score = 37.3 bits (75), Expect(4) = 3e-040
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +1
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 547 LARSLFLLSGGGNDFSAF 600
Score = 35.4 bits (71), Expect(3) = 6e-027
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 624 LWAGGGGVEGGEVVAAAAEEEEGPR 550
Score = 25.4 bits (49), Expect(4) = 3e-040
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3 / +1
Query: 717 FSEMGMGEQDAPAYISSMVSTYVQH 791
FS AY+ MV+TY++H
Sbjct: 589 FSAFDPSTASPQAYVVKMVTTYIEH 663
>gb|BQ764738.1|BQ764738 EBca01_SQ004_C20_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_C20 5', mRNA sequence
Length = 666
Score = 87.7 bits (185), Expect(4) = 2e-039
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 276 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 455
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 456 TTGKGTLTMRTQVQYFKKAADNM 524
Score = 80.8 bits (170), Expect(4) = 2e-028
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -3
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 523 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 344
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 343 PRRCEMTSARL*PLVKRPVGLPG 275
Score = 72.1 bits (151), Expect(4) = 2e-039
Identities = 32/69 (46%), Positives = 40/69 (57%)
Frame = +3 / +3
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 87 IALLCFVFVVGLVGTAAAAVGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 266
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 267 MDLPGRPTG 293
Score = 43.2 bits (88), Expect(4) = 2e-028
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -2
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 299 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 180
Score = 37.3 bits (75), Expect(4) = 2e-039
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GGNDFSAF
Sbjct: 552 LARSLFLLSGGGNDFSAF 605
Score = 35.4 bits (71), Expect(4) = 2e-028
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -1 / -2
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EGGEV+AA A++E+GPR
Sbjct: 629 LWAGGGGVEGGEVVAAAAEEEEGPR 555
Score = 22.6 bits (43), Expect(4) = 2e-028
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1 / -2
Query: 788 LDIG*DHATDVG 753
LD+G DH DVG
Sbjct: 665 LDVGGDHLDDVG 630
Score = 22.1 bits (42), Expect(4) = 2e-039
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1 / +1
Query: 751 QPTSVAWSQPMSS 789
+PTS WS P SS
Sbjct: 628 KPTSSRWSPPTSS 666
>gb|BI959431.1|BI959431 HVSMEn0019K08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019K08f, mRNA sequence
Length = 657
Score = 87.7 bits (185), Expect(4) = 2e-039
Identities = 37/83 (44%), Positives = 47/83 (56%)
Frame = +3 / +2
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYAXXXXXXXX 566
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 260 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGSGILD 439
Query: 567 XXXXXXXXXQKQITLFSKTKARM 635
+ Q+ F K M
Sbjct: 440 TTGKGTLTMRTQVQYFKKAADNM 508
Score = 80.8 bits (170), Expect(4) = 5e-027
Identities = 43/83 (51%), Positives = 46/83 (55%)
Frame = -2 / -1
Query: 634 ILALVFENSVICFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILN 455
+L+ F C VSVPFPVV RMPDPP+A*LAPI G ER GLI
Sbjct: 507 MLSAAFLKYWTCVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISK 328
Query: 454 PRRRATKSARL*PFVNRPETAPG 386
PRR SARL*P V RP PG
Sbjct: 327 PRRCEMTSARL*PLVKRPVGLPG 259
Score = 72.1 bits (151), Expect(4) = 2e-039
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +2
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 71 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 250
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 251 MDLPGRPTG 277
Score = 43.2 bits (88), Expect(4) = 5e-027
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 283 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 164
Score = 33.1 bits (66), Expect(4) = 2e-039
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 666 VSRSLFLISAGGNDFSAF 719
++RSLFL+S GG+DF AF
Sbjct: 536 LARSLFLLSGGGHDFXAF 589
Score = 29.9 bits (59), Expect(4) = 5e-027
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1 / -3
Query: 743 LFAHAHFTEGGEVIAAGADKEQGPR 669
L+A EG EV+ A A++E+GPR
Sbjct: 613 LWAGGGGVEGXEVVPAAAEEEEGPR 539
Score = 26.3 bits (51), Expect(4) = 2e-039
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3 / +2
Query: 753 AYISSMVSTYVQHI 794
AY+ MV+TY++HI
Sbjct: 614 AYVVKMVTTYIEHI 655
Score = 23.1 bits (44), Expect(4) = 5e-027
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 794 DMLDIG*DHATDV 756
D+LD+G DH DV
Sbjct: 655 DVLDVGGDHLDDV 617
>gb|CA023438.1|CA023438 HZ46D23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46D23
5-PRIME, mRNA sequence
Length = 500
Score = 84.0 bits (177), Expect(3) = 3e-039
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3 / +2
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYA 542
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 278 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYA 433
Score = 79.9 bits (168), Expect(2) = 2e-021
Identities = 41/72 (56%), Positives = 42/72 (58%)
Frame = -2 / -3
Query: 601 CFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILNPRRRATKSARL 422
C VSVPFPVV RMPDPP+A*LAPI G ER GLI PRR SARL
Sbjct: 492 CVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISKPRRCEMTSARL 313
Query: 421 *PFVNRPETAPG 386
*P V RP PG
Sbjct: 312 *PLVKRPVGLPG 277
Score = 72.1 bits (151), Expect(3) = 3e-039
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +2
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 89 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 268
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 269 MDLPGRPTG 295
Score = 45.1 bits (92), Expect(3) = 3e-039
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTN 604
+W QLR WI H +HHGKRD H A T+
Sbjct: 415 DWRQLRFRWIRHPRHHGKRDAHDADTS 495
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -2
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 301 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 182
>gb|CA024073.1|CA024073 HZ48E15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48E15
5-PRIME, mRNA sequence
Length = 495
Score = 84.0 bits (177), Expect(3) = 3e-039
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYA 542
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 273 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYA 428
Score = 79.9 bits (168), Expect(2) = 2e-021
Identities = 41/72 (56%), Positives = 42/72 (58%)
Frame = -2 / -3
Query: 601 CFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILNPRRRATKSARL 422
C VSVPFPVV RMPDPP+A*LAPI G ER GLI PRR SARL
Sbjct: 487 CVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISKPRRCEMTSARL 308
Query: 421 *PFVNRPETAPG 386
*P V RP PG
Sbjct: 307 *PLVKRPVGLPG 272
Score = 72.1 bits (151), Expect(3) = 3e-039
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +3
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 84 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 263
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 264 MDLPGRPTG 290
Score = 45.1 bits (92), Expect(3) = 3e-039
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +2
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTN 604
+W QLR WI H +HHGKRD H A T+
Sbjct: 410 DWRQLRFRWIRHPRHHGKRDAHDADTS 490
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -2
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 296 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 177
>gb|CA027921.1|CA027921 HZ60H05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60H05
5-PRIME, mRNA sequence
Length = 491
Score = 84.0 bits (177), Expect(3) = 3e-039
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYA 542
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 265 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYA 420
Score = 79.9 bits (168), Expect(2) = 2e-021
Identities = 41/72 (56%), Positives = 42/72 (58%)
Frame = -2 / -1
Query: 601 CFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILNPRRRATKSARL 422
C VSVPFPVV RMPDPP+A*LAPI G ER GLI PRR SARL
Sbjct: 479 CVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISKPRRCEMTSARL 300
Query: 421 *PFVNRPETAPG 386
*P V RP PG
Sbjct: 299 *PLVKRPVGLPG 264
Score = 72.1 bits (151), Expect(3) = 3e-039
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 76 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 255
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 256 MDLPGRPTG 282
Score = 45.1 bits (92), Expect(3) = 3e-039
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +3
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTN 604
+W QLR WI H +HHGKRD H A T+
Sbjct: 402 DWRQLRFRWIRHPRHHGKRDAHDADTS 482
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 288 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 169
>gb|CA025719.1|CA025719 HZ52P07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52P07
5-PRIME, mRNA sequence
Length = 489
Score = 84.0 bits (177), Expect(3) = 3e-039
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYA 542
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 267 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYA 422
Score = 79.9 bits (168), Expect(2) = 2e-021
Identities = 41/72 (56%), Positives = 42/72 (58%)
Frame = -2 / -3
Query: 601 CFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILNPRRRATKSARL 422
C VSVPFPVV RMPDPP+A*LAPI G ER GLI PRR SARL
Sbjct: 481 CVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISKPRRCEMTSARL 302
Query: 421 *PFVNRPETAPG 386
*P V RP PG
Sbjct: 301 *PLVKRPVGLPG 266
Score = 72.1 bits (151), Expect(3) = 3e-039
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +3
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 78 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 257
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 258 MDLPGRPTG 284
Score = 45.1 bits (92), Expect(3) = 3e-039
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +2
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTN 604
+W QLR WI H +HHGKRD H A T+
Sbjct: 404 DWRQLRFRWIRHPRHHGKRDAHDADTS 484
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -2
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 290 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 171
>gb|CA026295.1|CA026295 HZ55H24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55H24
5-PRIME, mRNA sequence
Length = 482
Score = 84.0 bits (177), Expect(3) = 3e-039
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3 / +2
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYA 542
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 260 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYA 415
Score = 79.9 bits (168), Expect(2) = 2e-021
Identities = 41/72 (56%), Positives = 42/72 (58%)
Frame = -2 / -3
Query: 601 CFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILNPRRRATKSARL 422
C VSVPFPVV RMPDPP+A*LAPI G ER GLI PRR SARL
Sbjct: 474 CVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISKPRRCEMTSARL 295
Query: 421 *PFVNRPETAPG 386
*P V RP PG
Sbjct: 294 *PLVKRPVGLPG 259
Score = 72.1 bits (151), Expect(3) = 3e-039
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +2
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 71 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 250
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 251 MDLPGRPTG 277
Score = 45.1 bits (92), Expect(3) = 3e-039
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +1
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTN 604
+W QLR WI H +HHGKRD H A T+
Sbjct: 397 DWRQLRFRWIRHPRHHGKRDAHDADTS 477
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -2
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 283 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 164
>gb|CA022610.1|CA022610 HZ43N05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ43N05
5-PRIME, mRNA sequence
Length = 479
Score = 84.0 bits (177), Expect(3) = 3e-039
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3 / +1
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYA 542
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 253 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYA 408
Score = 79.9 bits (168), Expect(2) = 2e-021
Identities = 41/72 (56%), Positives = 42/72 (58%)
Frame = -2 / -1
Query: 601 CFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILNPRRRATKSARL 422
C VSVPFPVV RMPDPP+A*LAPI G ER GLI PRR SARL
Sbjct: 467 CVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISKPRRCEMTSARL 288
Query: 421 *PFVNRPETAPG 386
*P V RP PG
Sbjct: 287 *PLVKRPVGLPG 252
Score = 72.1 bits (151), Expect(3) = 3e-039
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 64 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 243
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 244 MDLPGRPTG 270
Score = 45.1 bits (92), Expect(3) = 3e-039
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +3
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTN 604
+W QLR WI H +HHGKRD H A T+
Sbjct: 390 DWRQLRFRWIRHPRHHGKRDAHDADTS 470
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 276 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 157
>gb|CA025724.1|CA025724 HZ52P12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52P12
5-PRIME, mRNA sequence
Length = 478
Score = 84.0 bits (177), Expect(3) = 3e-039
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3 / +3
Query: 387 PGAVSGRFTNGYNLADLVARRLGFKMSPPAYLSLTPVSKFDLFTCRIGANYA 542
PG +GRFTNGYNLAD++++RLGF+MSP YLS+ P K L C+IGANYA
Sbjct: 252 PGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSMLPHDKILLGLCKIGANYA 407
Score = 79.9 bits (168), Expect(2) = 2e-021
Identities = 41/72 (56%), Positives = 42/72 (58%)
Frame = -2 / -1
Query: 601 CFCSVSVPFPVVLRMPDPPDA*LAPIRHVNRSNFDTGVNER*AGGLILNPRRRATKSARL 422
C VSVPFPVV RMPDPP+A*LAPI G ER GLI PRR SARL
Sbjct: 466 CVRIVSVPFPVVSRMPDPPEA*LAPILQRPSKILSCGSMERYGLGLISKPRRCEMTSARL 287
Query: 421 *PFVNRPETAPG 386
*P V RP PG
Sbjct: 286 *PLVKRPVGLPG 251
Score = 72.1 bits (151), Expect(3) = 3e-039
Identities = 32/69 (46%), Positives = 42/69 (60%)
Frame = +3 / +3
Query: 186 ISLVLLVCIASRSSLGAAETDVEQKRSSVPLMFVFGDSLVDVGNNNFLPPPAPRAASPYG 365
I+L+ V + + + AA E V ++VFGDSLVDVGNN++LP PAPRA PYG
Sbjct: 63 IALLCFVLVGAVCASTAAAAGGENGGRLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYG 242
Query: 366 IDFPSGTPG 392
+D P G
Sbjct: 243 MDLPGRPTG 269
Score = 45.1 bits (92), Expect(3) = 3e-039
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2 / +2
Query: 524 NWCQLRVWWIWHSQHHGKRDTHAAKTN 604
+W QLR WI H +HHGKRD H A T+
Sbjct: 389 DWRQLRFRWIRHPRHHGKRDAHDADTS 469
Score = 43.2 bits (88), Expect(2) = 2e-021
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = -1 / -3
Query: 398 DGAGGARREVDAVWRCSTGCRRRQEVIVSDIDQRITEHKH 279
+ AGG EV AV G RRRQ V+V+ + QR+ EH H
Sbjct: 275 EAAGGPAGEVHAVRPVRPGRRRRQVVVVAHVHQRVAEHVH 156
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 857,671,370
Number of Sequences: 312970
Number of extensions: 17351076
Number of successful extensions: 173529
Number of sequences better than 1.0e-020: 179
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 18931218357
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)