TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= M73028.2.3
(1601 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedl... 297 1e-079
gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare s... 228 7e-059
gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachi... 227 1e-058
emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA 227 1e-058
gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hyd... 223 2e-057
gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgar... 221 2e-057
gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedl... 222 5e-057
gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedl... 221 6e-057
gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedl... 221 6e-057
gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedl... 221 6e-057
gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-a... 221 6e-057
gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, sal... 221 6e-057
gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, sal... 221 6e-057
gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, wat... 221 6e-057
gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. v... 221 6e-057
gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedl... 221 9e-057
gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedl... 221 9e-057
gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedl... 215 7e-055
gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedl... 215 7e-055
emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA 215 7e-055
gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, sal... 212 5e-054
gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm libra... 209 5e-053
emb|X70879.1|HVMYB1G H.vulgare Myb1 gene 168 2e-052
gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedl... 203 2e-051
gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachi... 202 4e-051
gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedl... 199 3e-050
gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. v... 194 1e-048
gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedl... 122 2e-047
gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA li... 189 4e-047
gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedl... 188 1e-046
gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike... 186 4e-046
gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. v... 181 9e-046
gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. v... 183 2e-045
gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. v... 179 4e-044
gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. v... 178 8e-044
gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachi... 177 1e-043
gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachi... 176 4e-043
gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcrip... 176 4e-043
gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachi... 175 5e-043
gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, sal... 175 5e-043
gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. v... 175 5e-043
emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA 175 5e-043
gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. v... 175 7e-043
gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DA... 174 1e-042
gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. v... 174 1e-042
gb|CA014662.1|CA014662 HT11P22r HT Hordeum vulgare subsp. v... 174 1e-042
emb|X87690.1|HVRNAGAM1 H.vulgare mRNA for GAMyb protein 174 1e-042
gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. v... 173 3e-042
gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. v... 173 3e-042
emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcriptio... 173 3e-042
gb|CV058923.1|CV058923 BNEL42e10 Barley EST endosperm libra... 171 7e-042
gb|BF617439.1|BF617439 HVSMEc0017F20f Hordeum vulgare seedl... 164 8e-042
emb|X70880.1|HVMYB2G H.vulgare Myb2 gene 155 1e-041
gb|CA019900.1|CA019900 HV13K14r HV Hordeum vulgare subsp. v... 169 3e-041
gb|BQ764651.1|BQ764651 EBca01_SQ004_C14_R carpel, pre-anthe... 169 5e-041
gb|AL507585.1|AL507585 AL507585 Hordeum vulgare Barke devel... 168 6e-041
gb|CV056415.1|CV056415 BNEL17E10 Barley EST endosperm libra... 168 6e-041
gb|CV056818.1|CV056818 BNEL20h7 Barley EST endosperm librar... 168 6e-041
gb|CV058910.1|CV058910 BNEL42d1 Barley EST endosperm librar... 168 6e-041
gb|CV062377.1|CV062377 BNEL79d11 Barley EST endosperm libra... 168 6e-041
gb|CV063729.1|CV063729 BNEL92e6 Barley EST endosperm librar... 168 6e-041
gb|CA027463.1|CA027463 HZ59A03r HZ Hordeum vulgare subsp. v... 168 9e-041
gb|CV058774.1|CV058774 BNEL40g12 Barley EST endosperm libra... 168 9e-041
gb|CV062831.1|CV062831 BNEL83e5 Barley EST endosperm librar... 167 2e-040
gb|BF619532.3|BF619532 HVSMEc0003P10f Hordeum vulgare seedl... 149 3e-040
gb|BQ466900.1|BQ466900 HS01O24T HS Hordeum vulgare subsp. v... 160 2e-038
gb|CA019195.1|CA019195 HV11C18r HV Hordeum vulgare subsp. v... 158 9e-038
emb|X70881.1|HVMYB3G H.vulgare myb3 gene 122 2e-037
gb|BQ471469.1|BQ471469 HV02I08r HV Hordeum vulgare subsp. v... 90 5e-037
gb|BF618630.2|BF618630 HVSMEc0006O07f Hordeum vulgare seedl... 131 1e-036
gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (... 133 2e-036
gb|BI956816.1|BI956816 HVSMEn0005H11f Hordeum vulgare rachi... 153 2e-036
gb|CV063055.1|CV063055 BNEL86b3 Barley EST endosperm librar... 150 2e-035
gb|BF626054.2|BF626054 HVSMEa0015H17f Hordeum vulgare seedl... 149 5e-035
gb|CK123590.1|CK123590 BES1824104i24 BES1824 Hordeum vulgar... 148 1e-034
gb|AV920069.1|AV920069 AV920069 K. Sato unpublished cDNA li... 99 2e-034
gb|AL507948.1|AL507948 AL507948 Hordeum vulgare Barke devel... 145 7e-034
gb|BQ460434.1|BQ460434 HA09K10r HA Hordeum vulgare subsp. v... 145 7e-034
gb|BM371860.2|BM371860 EBma08_SQ004_D12_R maternal, 28 DPA,... 144 1e-033
gb|BU975173.1|BU975173 HB30F02r BC Hordeum vulgare subsp. v... 144 1e-033
gb|BU975705.1|BU975705 HB32A20r BC Hordeum vulgare subsp. v... 142 6e-033
gb|BQ753632.1|BQ753632 EBan01_SQ004_M23_R anther, yellow st... 140 2e-032
gb|BI779364.2|BI779364 EBro01_SQ003_M18_R root, 3 week, hyd... 118 2e-031
gb|BM443593.2|BM443593 EBro02_SQ005_M21_R root, 3 week, hyd... 133 4e-030
gb|BG343954.1|BG343954 HVSMEg0007D14f Hordeum vulgare pre-a... 124 1e-028
gb|BG369102.2|BG369102 HVSMEi0021L15f Hordeum vulgare 20 DA... 115 5e-028
gb|CA003603.1|CA003603 HS14P22r HS Hordeum vulgare subsp. v... 123 3e-027
gb|BI954784.1|BI954784 HVSMEm0019M04f Hordeum vulgare green... 122 4e-027
gb|AV933832.1|AV933832 AV933832 K. Sato unpublished cDNA li... 119 4e-026
gb|BQ765682.1|BQ765682 EBro03_SQ007_I24_R root, 3 week, wat... 119 4e-026
gb|AV932650.1|AV932650 AV932650 K. Sato unpublished cDNA li... 118 7e-026
gb|AL507750.1|AL507750 AL507750 Hordeum vulgare Barke devel... 102 9e-025
gb|BQ756020.1|BQ756020 EBem05_SQ001_E11_R embryo, 14 DPA, n... 102 1e-024
gb|CV063142.1|CV063142 BNEL87b1 Barley EST endosperm librar... 91 7e-022
gb|CV063485.1|CV063485 BNEL8H1 Barley EST endosperm library... 91 7e-022
gb|CV059557.1|CV059557 BNEL49d7 Barley EST endosperm librar... 91 7e-022
gb|CK124462.1|CK124462 BES1824109d16 BES1824 Hordeum vulgar... 96 9e-022
gb|CV057037.1|CV057037 BNEL23d1 Barley EST endosperm librar... 91 9e-022
gb|BF627413.1|BF627413 HVSMEb0004M17f Hordeum vulgare seedl... 103 2e-021
gb|CA008589.1|CA008589 HU11H04r HU Hordeum vulgare subsp. v... 103 2e-021
gb|BE455245.2|BE455245 HVSMEh0096L16f Hordeum vulgare 5-45 ... 86 3e-021
gb|CK124499.1|CK124499 BES1824109g02 BES1824 Hordeum vulgar... 94 4e-021
gb|BG368576.2|BG368576 HVSMEi0019M02f Hordeum vulgare 20 DA... 102 5e-021
gb|CV053601.1|CV053601 BNEL101a9 Barley EST endosperm libra... 91 8e-021
>gb|BE558747.2|BE558747 HV_CEb0020E02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020E02f, mRNA sequence
Length = 796
Score = 297 bits (642), Expect = 1e-079
Identities = 115/132 (87%), Positives = 123/132 (93%)
Frame = +2 / +1
Query: 314 RAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWI 493
+ MGRAPCCEKVGLKRGRWTAEED +LANYIA+HGEGSWRSLPKNAGLLRCGKSCRLRWI
Sbjct: 205 KGMGRAPCCEKVGLKRGRWTAEEDDILANYIAQHGEGSWRSLPKNAGLLRCGKSCRLRWI 384
Query: 494 NYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT 673
NYLR V+RGNISKEE+D+I+KLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT
Sbjct: 385 NYLRDGVRRGNISKEEDDLIVKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT 564
Query: 674 YRRKYTAGPDDT 709
+RR YT D T
Sbjct: 565 FRRIYTTVRDTT 600
Score = 199 bits (428), Expect(2) = 3e-051
Identities = 91/124 (73%), Positives = 93/124 (75%)
Frame = -3 / -3
Query: 690 VYFRRYVWICRLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLT 511
VY RR VWICRLR EFQ*FLISLSVRPGRWLAIRDHLLPRVA LT
Sbjct: 581 VYIRRKVWICRLRWEFQ*FLISLSVRPGRWLAIRDHLLPRVA*SLTMRSSSSLEMLPLLT 402
Query: 510 SARR*LIHRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHG 331
+ R*LIHRS QLLPH S PAFLG DL +PSPC AM* AS SSSAVHLPR SPTFSQHG
Sbjct: 401 PSLR*LIHRSLQLLPHLSSPAFLGRDLHEPSPCWAM*FASMSSSSAVHLPRFSPTFSQHG 222
Query: 330 ALPI 319
ALPI
Sbjct: 221 ALPI 210
Score = 107 bits (228), Expect(2) = 4e-027
Identities = 46/71 (64%), Positives = 54/71 (76%)
Frame = +1 / +3
Query: 319 DGEGAVLREGGAQAREVDGGRGPVTCQLHCGARRGVLEVAAQECRPAPVRQELPAPVDQL 498
DGEGAVLREGGA+A +VDGG G T +LHC ARRG++EV+ QECR V QEL A VDQL
Sbjct: 210 DGEGAVLREGGAEAGKVDGGGGRHTRKLHCPARRGLMEVSTQECRATEVWQELQAAVDQL 389
Query: 499 PSGGRQEGEHL 531
P +EG+HL
Sbjct: 390 PERRGEEGQHL 422
Score = 35.0 bits (70), Expect(2) = 4e-027
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / +3
Query: 634 ELLELAPQPADPHVPPEI 687
ELLEL QPADPH+P +I
Sbjct: 525 ELLELPSQPADPHLPADI 578
Score = 24.4 bits (47), Expect(2) = 3e-051
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3 / -2
Query: 786 FGGRPGVLPPRR 751
FG PGV PPRR
Sbjct: 675 FGDWPGVRPPRR 640
>gb|BM816803.1|BM816803 HC114B11_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC114B11_SK.ab1 similar to myb protein homolog - rice
gi|1946265|emb|CAA72217.1| (Y11414) myb [Oryza sativa],
mRNA sequence
Length = 879
Score = 228 bits (492), Expect = 7e-059
Identities = 85/124 (68%), Positives = 102/124 (82%)
Frame = +2 / +2
Query: 302 GASRRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCR 481
G S+ AMGR+PCCEK+GLKRG WTAEED L +I +HG +WR+LP AGLLRCGKSCR
Sbjct: 146 GVSKVAMGRSPCCEKMGLKRGPWTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCR 325
Query: 482 LRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
LRWINYLR D+KRGN + EEED II+LHA LGNRWS IA+ LPGRTDNEIKN W++HL +
Sbjct: 326 LRWINYLRPDIKRGNFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKK 505
Query: 662 QIHT 673
++ +
Sbjct: 506 RLQS 517
Score = 127 bits (272), Expect = 2e-028
Identities = 67/123 (54%), Positives = 71/123 (57%)
Frame = -3 / -1
Query: 669 WICRLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LI 490
W LRC Q FLISLSV PG A+ DHLLP +AW L S RR*LI
Sbjct: 513 WSRFLRCVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMASSSSLVKLPRLMSGRR*LI 334
Query: 489 HRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPIARR 310
HR RQLLP RSRPA GS Q PC +M* SSSAVH P LSP FSQ G LP+A
Sbjct: 333 HRRRQLLPQRSRPA*FGSARQLLWPCCSM*ATRVMSSSAVHGPLLSPIFSQQGDLPMATL 154
Query: 309 LAP 301
L P
Sbjct: 153 LTP 145
>gb|BI960347.1|BI960347 HVSMEn0024E22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024E22f, mRNA sequence
Length = 669
Score = 227 bits (490), Expect = 1e-058
Identities = 85/125 (68%), Positives = 100/125 (80%)
Frame = +2 / +3
Query: 293 LLPGASRRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGK 472
++ G +AMGR+PCCEK +G WT EED L YI HGEG WRSLPK AGLLRCGK
Sbjct: 45 VIGGGPSKAMGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGK 224
Query: 473 SCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSH 652
SCRLRWINYLR D+KRGN S EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H
Sbjct: 225 SCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTH 404
Query: 653 LSRQI 667
+ R++
Sbjct: 405 IRRKL 419
Score = 131 bits (281), Expect = 9e-030
Identities = 66/112 (58%), Positives = 68/112 (60%)
Frame = -3 / -3
Query: 651 CEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQL 472
C FQ*FLISLSV PG AIRDHLLPR W L S RR*LI R RQL
Sbjct: 403 CVFQ*FLISLSVLPGSLPAIRDHLLPRRLWSLMMSSSSSWLKLPRLRSGRR*LIQRRRQL 224
Query: 471 LPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPIA 316
LP RSRPA LG + Q PSPC+ M* S SSS V P L FSQHG LPIA
Sbjct: 223 LPQRSRPAALGRERQQPSPCALM*AVSRSSSSLVQAPLLVCAFSQHGDLPIA 68
>emb|X70877.1|HVMYB1 H.vulgare myb1 mRNA
Length = 1284
Score = 227 bits (490), Expect = 1e-058
Identities = 85/125 (68%), Positives = 100/125 (80%)
Frame = +2 / +2
Query: 293 LLPGASRRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGK 472
++ G +AMGR+PCCEK +G WT EED L YI HGEG WRSLPK AGLLRCGK
Sbjct: 185 VIGGGPSKAMGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGK 364
Query: 473 SCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSH 652
SCRLRWINYLR D+KRGN S EE+++IIKLH+ LGN+WSLIA LPGRTDNEIKNYWN+H
Sbjct: 365 SCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTH 544
Query: 653 LSRQI 667
+ R++
Sbjct: 545 IRRKL 559
Score = 129 bits (277), Expect = 3e-029
Identities = 65/112 (58%), Positives = 67/112 (59%)
Frame = -3 / -1
Query: 651 CEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQL 472
C FQ*FLISLSV PG AIRDHL PR W L S RR*LI R RQL
Sbjct: 543 CVFQ*FLISLSVLPGSLPAIRDHLFPRRLWSLMMSSSSSWLKLPRLRSGRR*LIQRRRQL 364
Query: 471 LPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPIA 316
LP RSRPA LG + Q PSPC+ M* S SSS V P L FSQHG LPIA
Sbjct: 363 LPQRSRPAALGRERQQPSPCALM*AVSRSSSSLVQAPLLVCAFSQHGDLPIA 208
>gb|BM443626.2|BM443626 EBro02_SQ005_P07_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_P07 5', mRNA sequence
Length = 523
Score = 223 bits (482), Expect = 2e-057
Identities = 84/124 (67%), Positives = 101/124 (81%)
Frame = +2 / +2
Query: 302 GASRRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCR 481
G S+ AMGR+PC EK+GLKRG WTAEED L +I +HG +WR+LP AGLLRCGKSCR
Sbjct: 116 GVSKVAMGRSPCSEKMGLKRGPWTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCR 295
Query: 482 LRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
LRWINYLR D+KRGN + EEED II+LHA LGNRWS IA+ LPGRTDNEIKN W++HL +
Sbjct: 296 LRWINYLRPDIKRGNFTSEEEDAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKK 475
Query: 662 QIHT 673
++ +
Sbjct: 476 RLQS 487
Score = 126 bits (269), Expect = 4e-028
Identities = 66/123 (53%), Positives = 71/123 (57%)
Frame = -3 / -2
Query: 669 WICRLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LI 490
W LRC Q FLISLSV PG A+ DHLLP +AW L S RR*LI
Sbjct: 483 WSRFLRCVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMASSSSLVKLPRLMSGRR*LI 304
Query: 489 HRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPIARR 310
HR RQLLP RSRPA GS Q PC +M* SSSAVH P LSP FS+ G LP+A
Sbjct: 303 HRRRQLLPQRSRPA*FGSARQLLWPCCSM*ATRVMSSSAVHGPLLSPIFSEQGDLPMATL 124
Query: 309 LAP 301
L P
Sbjct: 123 LTP 115
>gb|CK123641.1|CK123641 BES1824104m18 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M184 5-PRIME, mRNA sequence
Length = 506
Score = 221 bits (476), Expect(2) = 2e-057
Identities = 83/117 (70%), Positives = 95/117 (81%)
Frame = +2 / +1
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR PCC K GL RG WTA ED +L +YI EHGEG W SLPK AGL RCGKSCRLRW+NY
Sbjct: 25 MGRKPCCSKEGLNRGAWTAMEDDILVSYINEHGEGKWGSLPKRAGLNRCGKSCRLRWLNY 204
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIH 670
LR +KRGNIS +EE++I++LH LGNRWSLIA LPGRTDNEIKNYWN+ LS++ H
Sbjct: 205 LRPGIKRGNISDDEEELIVRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNTTLSKRNH 375
Score = 116 bits (248), Expect = 3e-025
Identities = 60/118 (50%), Positives = 63/118 (53%)
Frame = -3 / -1
Query: 669 WICRLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LI 490
W LR FQ*FLISLSVRPG AI DHLLP W L RR*L
Sbjct: 374 WFLLLRVVFQ*FLISLSVRPGSRPAISDHLLPSNLWSLTMSSSSSSEMLPLLIPGRR*LS 195
Query: 489 HRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPIA 316
HRSRQL PH PA LG PSPCS M* SS AVH P P+ QHG LP++
Sbjct: 194 HRSRQLFPHLFSPARLGRLPHLPSPCSLM*ETRMSSSIAVHAPLFRPSLEQHGFLPMS 21
Score = 25.8 bits (50), Expect(2) = 2e-057
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2 / +2
Query: 1154 SRPICGAGRSRTSTARSCGRPP 1219
S P GAG+ + +R CG PP
Sbjct: 440 SPPS*GAGQXPDTESRRCGAPP 505
>gb|BF259663.3|BF259663 HVSMEf0019O20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019O20f, mRNA sequence
Length = 528
Score = 222 bits (479), Expect = 5e-057
Identities = 80/121 (66%), Positives = 100/121 (82%)
Frame = +2 / +2
Query: 305 ASRRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRL 484
+ R AMGR+PCCEK +G WT EED+ L ++ HGEG WRSLP AGLLRCGKSCRL
Sbjct: 53 SERAAMGRSPCCEKAHTNKGAWTREEDERLVAHVRAHGEGCWRSLPSAAGLLRCGKSCRL 232
Query: 485 RWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQ 664
RWINYLR D+KRGN S++E+++I+KLH+ LGN+WSLIA+ LPGRTDNEIKNYWN+H+ R+
Sbjct: 233 RWINYLRPDLKRGNFSRDEDELIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRK 412
Query: 665 I 667
+
Sbjct: 413 L 415
Score = 128 bits (274), Expect = 9e-029
Identities = 63/114 (55%), Positives = 67/114 (58%)
Frame = -3 / -1
Query: 651 CEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQL 472
C FQ*FLISLSV PGR A+ DHLLPR W L S RR*LIH RQL
Sbjct: 399 CVFQ*FLISLSVLPGRRAAMSDHLLPRRLWSLTMSSSSSRLKLPRLRSGRR*LIHLRRQL 220
Query: 471 LPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPIARR 310
LP RSRPA LGS+ Q PSPC+ S SSS VH P FSQHG P+A R
Sbjct: 219 LPQRSRPAALGSERQHPSPCARTWATSRSSSSLVHAPLFVCAFSQHGDRPMAAR 58
>gb|BG300704.1|BG300704 HVSMEb0018B03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0018B03f, mRNA sequence
Length = 609
Score = 221 bits (478), Expect = 6e-057
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2 / +1
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 130 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINY 309
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 310 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 477
>gb|BE559390.2|BE559390 HV_CEb0024H06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024H06f, mRNA sequence
Length = 906
Score = 221 bits (478), Expect = 6e-057
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 125 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINY 304
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 305 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 472
>gb|BF617565.3|BF617565 HVSMEc0018A12f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018A12f, mRNA sequence
Length = 777
Score = 221 bits (478), Expect = 6e-057
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2 / +1
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 115 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINY 294
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 295 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 462
>gb|BG343209.2|BG343209 HVSMEg0005B14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005B14f, mRNA sequence
Length = 935
Score = 221 bits (478), Expect = 6e-057
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2 / +3
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 129 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHRHGHGNWRALPKQAGLLRCGKSCRLRWINY 308
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 309 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 476
>gb|BM371065.2|BM371065 EBro04_SQ003_G02_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G02 5', mRNA sequence
Length = 604
Score = 221 bits (478), Expect = 6e-057
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 131 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINY 310
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 311 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 478
>gb|BM371066.2|BM371066 EBro04_SQ003_G03_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_G03 5', mRNA sequence
Length = 501
Score = 221 bits (478), Expect = 6e-057
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 131 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINY 310
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 311 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 478
>gb|BQ763917.1|BQ763917 EBro03_SQ005_C21_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_C21 5', mRNA sequence
Length = 681
Score = 221 bits (478), Expect = 6e-057
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 119 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINY 298
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 299 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 466
>gb|CA032540.1|CA032540 HX13G05r HX Hordeum vulgare subsp. vulgare cDNA clone HX13G05
5-PRIME, mRNA sequence
Length = 639
Score = 221 bits (478), Expect = 6e-057
Identities = 83/116 (71%), Positives = 97/116 (83%)
Frame = +2 / +3
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 132 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINY 311
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 312 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 479
>gb|BG301022.1|BG301022 HVSMEb0019E16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019E16f, mRNA sequence
Length = 625
Score = 221 bits (477), Expect = 9e-057
Identities = 81/116 (69%), Positives = 96/116 (82%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EEDQ L YI HGEG WRSLPK AGLLRCGKSCRLRW+NY
Sbjct: 80 MGRSPCCEKAHTNKGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY 259
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN + +++++IIKLHA LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 260 LRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKL 427
Score = 132 bits (282), Expect = 7e-030
Identities = 65/114 (57%), Positives = 68/114 (59%)
Frame = -3 / -2
Query: 660 RLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRS 481
RL C FQ*FLISLSVRPG AI DHLLPR AW L S RR* I R
Sbjct: 420 RLMCVFQ*FLISLSVRPGSCPAINDHLLPRRAWSLMMSSSSSSVKLPRLRSGRR*FIQRR 241
Query: 480 RQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPI 319
RQLLP R RPA LGS+ Q PSP + M* WSSS V P L FSQHG LP+
Sbjct: 240 RQLLPQRRRPAALGSERQQPSPWALM*PIRRWSSSLVQAPLLVCAFSQHGDLPM 79
>gb|BG301049.1|BG301049 HVSMEb0019G16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019G16f, mRNA sequence
Length = 624
Score = 221 bits (477), Expect = 9e-057
Identities = 81/116 (69%), Positives = 96/116 (82%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EEDQ L YI HGEG WRSLPK AGLLRCGKSCRLRW+NY
Sbjct: 80 MGRSPCCEKAHTNKGAWTKEEDQRLIGYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNY 259
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN + +++++IIKLHA LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 260 LRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKL 427
Score = 132 bits (282), Expect = 7e-030
Identities = 65/114 (57%), Positives = 68/114 (59%)
Frame = -3 / -1
Query: 660 RLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRS 481
RL C FQ*FLISLSVRPG AI DHLLPR AW L S RR* I R
Sbjct: 420 RLMCVFQ*FLISLSVRPGSCPAINDHLLPRRAWSLMMSSSSSSVKLPRLRSGRR*FIQRR 241
Query: 480 RQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPI 319
RQLLP R RPA LGS+ Q PSP + M* WSSS V P L FSQHG LP+
Sbjct: 240 RQLLPQRRRPAALGSERQQPSPWALM*PIRRWSSSLVQAPLLVCAFSQHGDLPM 79
>gb|BF627287.2|BF627287 HVSMEb0004H07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004H07f, mRNA sequence
Length = 756
Score = 215 bits (463), Expect = 7e-055
Identities = 79/116 (68%), Positives = 96/116 (82%)
Frame = +2 / +1
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EEDQ L YI +GEG WRSLPK AGLLRCGKSCRLRW+NY
Sbjct: 52 MGRSPCCEKEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNY 231
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN + +E+++II+LH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 232 LRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKL 399
Score = 140 bits (300), Expect = 2e-032
Identities = 66/114 (57%), Positives = 71/114 (62%)
Frame = -3 / -2
Query: 660 RLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRS 481
RL C FQ*FLISLSV PG W A+RDHLLP W L S RR* I R
Sbjct: 392 RLMCVFQ*FLISLSVLPGSWPAMRDHLLPSRLWRRMMSSSSSSVKLPRLRSGRR*FIQRR 213
Query: 480 RQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPI 319
RQLLP RSRPA LGS+ Q PSP + M* S WSSS VH P L +FSQHG LP+
Sbjct: 212 RQLLPQRSRPAALGSERQQPSPLALM*AISRWSSSLVHAPLLVCSFSQHGDLPM 51
>gb|BF620286.3|BF620286 HVSMEc0019F08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0019F08f, mRNA sequence
Length = 690
Score = 215 bits (463), Expect = 7e-055
Identities = 80/116 (68%), Positives = 94/116 (81%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCC+KVGLK+G WT EED+ L +I EHG GSWR+LP AGL RCGKSCRLRW NY
Sbjct: 23 MGRSPCCDKVGLKKGPWTTEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNY 202
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG S +EE II+LHA LGNRWS IA+HL RTDNEIKNYWN+HL +++
Sbjct: 203 LRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNYWNTHLKKRL 370
>emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA
Length = 1102
Score = 215 bits (463), Expect = 7e-055
Identities = 79/116 (68%), Positives = 96/116 (82%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+PCCEK +G WT EEDQ L YI +GEG WRSLPK AGLLRCGKSCRLRW+NY
Sbjct: 44 MGRSPCCEKEHTNKGAWTKEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNY 223
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN + +E+++II+LH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 224 LRPDLKRGNFTDDEDELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKL 391
Score = 140 bits (300), Expect = 2e-032
Identities = 66/114 (57%), Positives = 71/114 (62%)
Frame = -3 / -2
Query: 660 RLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRS 481
RL C FQ*FLISLSV PG W A+RDHLLP W L S RR* I R
Sbjct: 384 RLMCVFQ*FLISLSVLPGSWPAMRDHLLPSRLWRRMMSSSSSSVKLPRLRSGRR*FIQRR 205
Query: 480 RQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPI 319
RQLLP RSRPA LGS+ Q PSP + M* S WSSS VH P L +FSQHG LP+
Sbjct: 204 RQLLPQRSRPAALGSERQQPSPLALM*AISRWSSSLVHAPLLVCSFSQHGDLPM 43
>gb|BM370838.2|BM370838 EBro04_SQ002_H14_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_H14 5', mRNA sequence
Length = 455
Score = 212 bits (457), Expect = 5e-054
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGRAPCCEK+GLKRG WT EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINY
Sbjct: 131 MGRAPCCEKMGLKRGPWTPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINY 310
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYW 643
LR D+KRGN S EEE II+LH LGNRWS IA+ LPGRTDNEIKN W
Sbjct: 311 LRPDIKRGNFSDEEEQSIIQLHQLLGNRWSAIAAMLPGRTDNEIKNVW 454
>gb|CV053597.1|CV053597 BNEL101a5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101a5 5' similar to typical
P-type R2R3 Myb protein, mRNA sequence
Length = 546
Score = 209 bits (450), Expect = 5e-053
Identities = 75/122 (61%), Positives = 96/122 (78%)
Frame = +2 / +3
Query: 302 GASRRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCR 481
G AMGR PCC+KVG+K+G WT EED +L +YI EHG G+WR++P N GL+RC KSCR
Sbjct: 114 GRGGGAMGRPPCCDKVGVKKGPWTPEEDLMLVSYIQEHGPGNWRAVPTNTGLMRCSKSCR 293
Query: 482 LRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
LRW NYLR +KRGN + +EE +I+ L A LGNRW+ IAS+LP RTDN+IKNYWN+HL +
Sbjct: 294 LRWTNYLRPXIKRGNFNDQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKK 473
Query: 662 QI 667
++
Sbjct: 474 KL 479
Score = 107 bits (229), Expect = 1e-022
Identities = 58/114 (50%), Positives = 65/114 (57%)
Frame = -3 / -3
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSR 478
LR FQ*FL+SLSV G+ AI LPR AW L RR*L+HRSR
Sbjct: 469 LRWVFQ*FLMSLSVLSGK*DAIAAQRLPRSAWRWTMSFSSWSLKLPRLIXGRR*LVHRSR 290
Query: 477 QLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPIA 316
QLL HR P +G+ Q P PCS M* S SSS V P L+PT SQHG LP+A
Sbjct: 289 QLLLHRISPVLVGTARQFPGPCSWM*ETSMRSSSGVQGPFLTPTLSQHGGLPMA 128
>emb|X70879.1|HVMYB1G H.vulgare Myb1 gene
Length = 2587
Score = 168 bits (362), Expect(2) = 2e-052
Identities = 64/97 (65%), Positives = 75/97 (77%)
Frame = +2 / +3
Query: 293 LLPGASRRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGK 472
++ G +AMGR+PCCEK +G WT EED L YI HGEG WRSLPK AGLLRCGK
Sbjct: 975 VIGGGPSKAMGRSPCCEKAHTNKGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGK 1154
Query: 473 SCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNR 583
SCRLRWINYLR D+KRGN S EE+++IIKLH+ LGN+
Sbjct: 1155 SCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNK 1265
Score = 93.6 bits (198), Expect(2) = 2e-023
Identities = 47/90 (52%), Positives = 50/90 (55%)
Frame = -3 / -1
Query: 585 HLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLPHRSRPAFLGSDLQDPSPCSA 406
+L PR W L S RR*LI R RQLLP RSRPA LG + Q PSPC+
Sbjct: 1267 YLFPRRLWSLMMSSSSSWLKLPRLRSGRR*LIQRRRQLLPQRSRPAALGRERQQPSPCAL 1088
Query: 405 M*LASNWSSSAVHLPRLSPTFSQHGALPIA 316
M* S SSS V P L FSQHG LPIA
Sbjct: 1087 M*AVSRSSSSLVQAPLLVCAFSQHGDLPIA 998
Score = 63.8 bits (133), Expect(2) = 2e-052
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +2 / +2
Query: 581 RWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
RWSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 1409 RWSLIAGRLPGRTDNEIKNYWNTHIRRKL 1495
Score = 41.8 bits (85), Expect(2) = 2e-023
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = -3 / -2
Query: 651 CEFQ*FLISLSVRPGRWLAIRDHL 580
C FQ*FLISLSV PG AIRDHL
Sbjct: 1479 CVFQ*FLISLSVLPGSLPAIRDHL 1408
>gb|BF259477.2|BF259477 HVSMEf0019D12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019D12f, mRNA sequence
Length = 577
Score = 203 bits (438), Expect = 2e-051
Identities = 74/117 (63%), Positives = 95/117 (81%)
Frame = +2 / +3
Query: 317 AMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWIN 496
+MGR P ++ GLK+G WT+EED+ L +YI +HG GSWR+LP+ AGL RCGKSCRLRW N
Sbjct: 81 SMGRPPSSDENGLKKGPWTSEEDEKLMSYIQKHGHGSWRALPQLAGLNRCGKSCRLRWTN 260
Query: 497 YLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
YL+ D+KRG S+EEE I++LH LGN+WS IA HLPGRTDNEIKN+WN+HL +++
Sbjct: 261 YLKPDIKRGKFSQEEEQTILQLHTVLGNKWSAIAKHLPGRTDNEIKNFWNTHLRKKL 431
>gb|BI959020.1|BI959020 HVSMEn0017M09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017M09f, mRNA sequence
Length = 656
Score = 202 bits (436), Expect = 4e-051
Identities = 73/119 (61%), Positives = 93/119 (78%)
Frame = +2 / +1
Query: 311 RRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRW 490
RR +GR PCCEK +KRG+WT EED L +YI +HG +WR +PKNAGL RCGKSCRLRW
Sbjct: 4 RRRLGRIPCCEKDNVKRGQWTPEEDNKLLSYITQHGTRNWRLIPKNAGLQRCGKSCRLRW 183
Query: 491 INYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
NYLR D+K G + EE IIKLH+ +GNRWS+IA+ LPGRTDN++KN+WN+ L +++
Sbjct: 184 TNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKL 360
>gb|BF617142.2|BF617142 HVSMEc0014M02f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014M02f, mRNA sequence
Length = 771
Score = 199 bits (430), Expect = 3e-050
Identities = 76/116 (65%), Positives = 93/116 (80%)
Frame = +2 / +3
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
MGR+P EK +G WT EEDQ L YI +GEG WRSLPK AGLLRCGKSCRLRW+NY
Sbjct: 36 MGRSPG*EKEHTNKGAWTTEEDQRLIAYIRANGEGCWRSLPKAAGLLRCGKSCRLRWMNY 215
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRGN + + +++II+LH+ LGN+WSLIA LPGRTDNEIKNYWN+H+ R++
Sbjct: 216 LRPDLKRGNFTDD*DELIIRLHSLLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKL 383
Score = 86.8 bits (183), Expect(2) = 6e-027
Identities = 40/64 (62%), Positives = 44/64 (68%)
Frame = -3 / -3
Query: 510 SARR*LIHRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHG 331
S RR* I R RQLLP RSRPA LGS+ Q PSP + M* S WSSS VH P L +FSQ G
Sbjct: 226 SGRR*FIQRRRQLLPQRSRPAALGSERQQPSPLALM*AISRWSSSVVHAPLLVCSFSQPG 47
Query: 330 ALPI 319
LP+
Sbjct: 46 DLPM 35
Score = 55.1 bits (114), Expect(2) = 6e-027
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = -3 / -3
Query: 660 RLRCEFQ*FLISLSVRPGRWLAIRDHLLP 574
RL C FQ*FLISLSV PG W A+RDHLLP
Sbjct: 376 RLMCVFQ*FLISLSVLPGSWPAMRDHLLP 290
>gb|BU998112.1|BU998112 HI10A14r HI Hordeum vulgare subsp. vulgare cDNA clone HI10A14
5-PRIME, mRNA sequence
Length = 580
Score = 194 bits (418), Expect = 1e-048
Identities = 70/118 (59%), Positives = 89/118 (75%)
Frame = +2 / +1
Query: 314 RAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWI 493
R G CC K ++RG W+ EED+ L YI HG G W S+P+ AGL RCGKSCRLRWI
Sbjct: 55 RRWGHHSCCNKQKVRRGLWSPEEDEKLVKYITAHGHGCWSSVPRQAGLQRCGKSCRLRWI 234
Query: 494 NYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
NYLR D+KRG+ S+EEE +I++LH LGNRW+ IA HLPGRTDNE+KN+WNS + +++
Sbjct: 235 NYLRPDLKRGSFSQEEEALIVELHRVLGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKL 408
>gb|BF064941.1|BF064941 HV_CEb0022A15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022A15f, mRNA sequence
Length = 838
Score = 122 bits (261), Expect(2) = 2e-047
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +2 / +3
Query: 305 ASRRAMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRL 484
+ R AMGR+PCCEK +G WT EED+ L ++ HGEG WRSLP GLLRCGKSCRL
Sbjct: 165 SERAAMGRSPCCEKAHTNKGAWTTEEDERLVAHVRAHGEGCWRSLPSADGLLRCGKSCRL 344
Query: 485 RWINYLRADVK 517
WINYLR D+K
Sbjct: 345 TWINYLRPDLK 377
Score = 88.1 bits (186), Expect(2) = 2e-047
Identities = 29/51 (56%), Positives = 45/51 (88%)
Frame = +2 / +1
Query: 515 KRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
+R N+ ++E+++I+KLH+ L N+WSLIA+ LPGRTDNEIKNYWN+H+ +++
Sbjct: 376 RRVNLRRDEDELIVKLHSLLRNKWSLIAARLPGRTDNEIKNYWNTHIPKKL 528
Score = 83.5 bits (176), Expect(2) = 1e-023
Identities = 39/67 (58%), Positives = 43/67 (64%)
Frame = -3 / -1
Query: 510 SARR*LIHRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHG 331
S RR*LIH RQLLP RSRP+ LGS+ Q PSPC+ S SSS VH P FSQHG
Sbjct: 370 SGRR*LIHVRRQLLPQRSRPSALGSERQHPSPCARTWATSRSSSSVVHAPLFVCAFSQHG 191
Query: 330 ALPIARR 310
P+A R
Sbjct: 190 DRPMAAR 170
Score = 47.3 bits (97), Expect(2) = 1e-023
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = -3 / -3
Query: 651 CEFQ*FLISLSVRPGRWLAIRDHLLPRVAW 562
C FQ*FLISLSV PGR A+ DHLL R W
Sbjct: 512 CVFQ*FLISLSVLPGRRAAMSDHLLRRRLW 423
>gb|AV914947.1|AV914947 AV914947 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9c13 5', mRNA sequence
Length = 506
Score = 189 bits (407), Expect = 4e-047
Identities = 72/108 (66%), Positives = 86/108 (79%)
Frame = +2 / +2
Query: 350 GLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNI 529
GL RGR TAEED L +I +HG +WR+LP AGLLRCGKSCRLRWINYLR D+KRGN
Sbjct: 2 GLXRGRGTAEEDMTLVAHIEQHGHSNWRALPNQAGLLRCGKSCRLRWINYLRPDIKRGNF 181
Query: 530 SKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHT 673
+ EEE II+LHA LGNRWS IA+ LPGRTDNEIKN W++HL +++ +
Sbjct: 182 TSEEEGAIIQLHAMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLQS 325
Score = 103 bits (220), Expect = 2e-021
Identities = 57/107 (53%), Positives = 60/107 (56%)
Frame = -3 / -3
Query: 669 WICRLRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LI 490
W LRC Q FLISLSV PG A+ DHLLP +AW L S RR*LI
Sbjct: 321 WSRFLRCVCQTFLISLSVLPGSLAAMVDHLLPSMAWSWMMAPSSSLVKLPRLMSGRR*LI 142
Query: 489 HRSRQLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSP 349
HR RQLLP RSRPA GS Q PC +M* SSSAV P LSP
Sbjct: 141 HRRRQLLPQRSRPA*FGSARQLLWPCCSM*ATRVMSSSAVPRPLLSP 1
>gb|BF261857.2|BF261857 HV_CEa0002G15f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0002G15f, mRNA sequence
Length = 853
Score = 188 bits (404), Expect = 1e-046
Identities = 72/116 (62%), Positives = 91/116 (78%)
Frame = +2 / +2
Query: 320 MGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINY 499
M + P K LKRG W+ EED+ L N+IA++G G W S+PK AGL RCGKSCRLRWINY
Sbjct: 194 MSKRPGGTKKRLKRGLWSPEEDEKLMNHIAKYGNGCWSSVPKIAGLERCGKSCRLRWINY 373
Query: 500 LRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
LR D+KRG S+EEED+II LH+ LGN+WS IA+ LPGRTDNE+KN+WNS + +++
Sbjct: 374 LRPDLKRGAFSQEEEDLIIHLHSILGNKWSQIAAQLPGRTDNEVKNFWNSFIKKKL 541
>gb|BI946875.1|BI946875 HVSMEl0002J21f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0002J21f, mRNA sequence
Length = 845
Score = 186 bits (400), Expect = 4e-046
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = +2 / +3
Query: 335 CCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADV 514
CC K +KRG W+ EED+ L +YI HG W ++PKNAGL RCGKSCRLRWINYLR D+
Sbjct: 60 CCSKQKVKRGLWSPEEDEKLLSYITAHGHSCWSAVPKNAGLQRCGKSCRLRWINYLRPDL 239
Query: 515 KRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
KRG S++EE I+ +H LGNRW+ IA HLPGRTDNE+KN+WNS + +++
Sbjct: 240 KRGTFSEQEERTILDVHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKL 392
Score = 109 bits (232), Expect = 5e-023
Identities = 59/115 (51%), Positives = 65/115 (56%)
Frame = -3 / -2
Query: 648 EFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLL 469
EFQ FL SLSVRPGR LAI H LP++ W L S RR*LIHRSRQLL
Sbjct: 373 EFQKFLTSLSVRPGRCLAICAHRLPKMRWTSRMVRSSCSEKVPRLRSGRR*LIHRSRQLL 194
Query: 468 PHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLPRLSPTFSQHGALPIARRLA 304
P R PAFLG+ LQ PC+ M*L S SSS H PR + Q A RL+
Sbjct: 193 PQRCSPAFLGTALQQLWPCAVM*LRSFSSSSGDHSPRFTFCLLQQWCPMAAGRLS 29
>gb|CB876695.1|CB876695 HP02B11T HP Hordeum vulgare subsp. vulgare cDNA clone HP02B11
5-PRIME, mRNA sequence
Length = 637
Score = 181 bits (390), Expect(2) = 9e-046
Identities = 65/105 (61%), Positives = 85/105 (80%)
Frame = +2 / +3
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
+K+G WT EED +L +YI +HG G+WRS+P+N GL+RC KSCRLRW NYLR +KRGN +
Sbjct: 168 VKKGPWTPEEDIILVSYIQQHGPGNWRSVPENTGLMRCSKSCRLRWTNYLRPGIKRGNFT 347
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
+ EE III L A LGN+W+ IAS+LP RTDN+IKNYWN+HL +++
Sbjct: 348 QHEEGIIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKV 482
Score = 23.5 bits (45), Expect(2) = 9e-046
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +3
Query: 320 MGRAPCCEKVG 352
MGR PCC+ G
Sbjct: 129 MGRPPCCDNGG 161
>gb|CB883071.1|CB883071 HQ01B16w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ01B16
3-PRIME, mRNA sequence
Length = 535
Score = 183 bits (395), Expect = 2e-045
Identities = 68/111 (61%), Positives = 87/111 (78%)
Frame = +2 / +1
Query: 335 CCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADV 514
C + GLK+G WT EED+LL +Y+ + G+WR LPK AGL RCGKSCRLRW NYLR D+
Sbjct: 118 CESRQGLKKGPWTPEEDKLLVDYVQANAPGNWRMLPKLAGLNRCGKSCRLRWTNYLRPDI 297
Query: 515 KRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
KRG + EE I++LHA +GN+WS+IA+ LPGRTDNEIKNYWN++L +Q+
Sbjct: 298 KRGPFTPEEHKSILQLHAIVGNKWSMIAAQLPGRTDNEIKNYWNTNLKKQL 450
>gb|BQ463523.1|BQ463523 HI05J08r HI Hordeum vulgare subsp. vulgare cDNA clone HI05J08
5-PRIME, mRNA sequence
Length = 436
Score = 179 bits (385), Expect = 4e-044
Identities = 68/99 (68%), Positives = 81/99 (81%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
L++G W+ EED+ L N+I +G G W S+PK AGL RCGKSCRLRWINYLR D+KRG+ S
Sbjct: 140 LRKGLWSPEEDEKLYNHIIRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFS 319
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNS 649
++EED I+ LH LGNRWS IASHLPGRTDNEIKN+WNS
Sbjct: 320 QQEEDAIVGLHEILGNRWSQIASHLPGRTDNEIKNFWNS 436
>gb|BQ467188.1|BQ467188 HS02O24r HS Hordeum vulgare subsp. vulgare cDNA clone HS02O24
5-PRIME, mRNA sequence
Length = 363
Score = 178 bits (383), Expect = 8e-044
Identities = 63/105 (60%), Positives = 83/105 (79%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
+K+G WT EED +L +Y+ EHG G+WR++P GL+RC KSCRLRW NYLR +KRGN +
Sbjct: 11 VKKGPWTPEEDLVLVSYVQEHGPGNWRAVPTRTGLMRCSKSCRLRWTNYLRPGIKRGNFT 190
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
+EE +I+ L A LGNRW+ IAS+LP RTDN+IKNYWN+HL R++
Sbjct: 191 DQEEKLIVHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKRKL 325
>gb|BI958189.1|BI958189 HVSMEn0013M24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013M24f, mRNA sequence
Length = 471
Score = 177 bits (382), Expect = 1e-043
Identities = 70/104 (67%), Positives = 79/104 (75%)
Frame = +2 / +1
Query: 317 AMGRAPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWIN 496
A G +K +G WT EEDQ L YI HGEG WRSLPK AGLLRCGKSCRLRWIN
Sbjct: 160 AWGGPRAAKKAHTNKGAWTKEEDQRLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWIN 339
Query: 497 YLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNE 628
YLR D+KRGN ++EE+++IIKLH LGN+WSLIA LPGRTDNE
Sbjct: 340 YLRPDLKRGNFTEEEDELIIKLHELLGNKWSLIAGRLPGRTDNE 471
>gb|BI957410.1|BI957410 HVSMEn0009G13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009G13f, mRNA sequence
Length = 673
Score = 176 bits (378), Expect = 4e-043
Identities = 67/99 (67%), Positives = 80/99 (80%)
Frame = +2 / +2
Query: 371 TAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDI 550
T EED++L +I HG G+WR+LPK AGLLRCGKSCRLRWINYLR D+KRGN S EEE
Sbjct: 2 TPEEDKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSDEEEQS 181
Query: 551 IIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
II+LH LGNRWS IA+ LPGRTDN IKN W++HL +++
Sbjct: 182 IIQLHQLLGNRWSAIAARLPGRTDN*IKNVWHTHLKKRL 298
>gb|AY672068.1| Hordeum vulgare subsp. vulgare myb transcription factor mRNA,
complete cds
Length = 1542
Score = 176 bits (378), Expect = 4e-043
Identities = 65/105 (61%), Positives = 82/105 (78%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
L++G W+ EED+ L Y+ G+GSW + +NAGL RCGKSCRLRWINYLR D+KRG S
Sbjct: 179 LRKGLWSPEEDERLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFS 358
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
EED+I+ LHA LGNRWS IA+ LPGRTDNEIKN+WNS + +++
Sbjct: 359 PHEEDLIVNLHAILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRL 493
Score = 103 bits (220), Expect = 2e-021
Identities = 53/99 (53%), Positives = 56/99 (56%)
Frame = -3 / -1
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSR 478
L EFQ FLISLSVRPG AI DHLLPR+AW L S RR*LIHR R
Sbjct: 483 LMVEFQKFLISLSVRPGNLAAI*DHLLPRMAWRLTMRSSSCGEKAPRLRSGRR*LIHRRR 304
Query: 477 QLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLP 361
QLLPHR PA + L DP P +M S SSS H P
Sbjct: 303 QLLPHRCNPALRATSLHDP*PLRSMYATSLSSSSGDHSP 187
>gb|BI959333.1|BI959333 HVSMEn0019E14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019E14f, mRNA sequence
Length = 635
Score = 175 bits (377), Expect = 5e-043
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
+++G W+ EED+ L N+I HG G W S+P+ A L RCGKSCRLRWINYLR D+KRG S
Sbjct: 119 VRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFS 298
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
++EED I+ LH LGNRWS IASHLPGRTDNEIKN+WNS + +++
Sbjct: 299 QQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKL 433
Score = 101 bits (216), Expect(2) = 3e-022
Identities = 53/95 (55%), Positives = 57/95 (60%)
Frame = -3 / -3
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ FLISLSVRPGR AI DHLLPR+ W L S RR*LIHR RQLLP
Sbjct: 411 FQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLP 232
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLP 361
R A LG++LQ P+PC M L S SSS H P
Sbjct: 231 QRFSAASLGTELQQPTPCRMMWL*SFSSSSGDHSP 127
Score = 27.6 bits (54), Expect(2) = 3e-022
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2 / -1
Query: 1324 RTSRTGAKSRTPPARDRPGC 1265
R+ RT RTPPA GC
Sbjct: 617 RSRRTAGTGRTPPAASERGC 558
>gb|BQ761004.1|BQ761004 EBro04_SQ001_O04_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ001_O04 5', mRNA sequence
Length = 383
Score = 175 bits (377), Expect = 5e-043
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
+++G W+ EED+ L N+I HG G W S+P+ A L RCGKSCRLRWINYLR D+KRG S
Sbjct: 32 VRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFS 211
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
++EED I+ LH LGNRWS IASHLPGRTDNEIKN+WNS + +++
Sbjct: 212 QQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKL 346
Score = 101 bits (216), Expect = 9e-021
Identities = 53/95 (55%), Positives = 57/95 (60%)
Frame = -3 / -3
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ FLISLSVRPGR AI DHLLPR+ W L S RR*LIHR RQLLP
Sbjct: 324 FQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLP 145
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLP 361
R A LG++LQ P+PC M L S SSS H P
Sbjct: 144 QRFSAASLGTELQQPTPCRMMWL*SFSSSSGDHSP 40
>gb|BU996472.1|BU996472 HM13L14r HM Hordeum vulgare subsp. vulgare cDNA clone HM13L14
5-PRIME, mRNA sequence
Length = 648
Score = 175 bits (377), Expect = 5e-043
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
+++G W+ EED+ L N+I HG G W S+P+ A L RCGKSCRLRWINYLR D+KRG S
Sbjct: 128 VRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFS 307
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
++EED I+ LH LGNRWS IASHLPGRTDNEIKN+WNS + +++
Sbjct: 308 QQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKL 442
Score = 101 bits (216), Expect(2) = 3e-022
Identities = 53/95 (55%), Positives = 57/95 (60%)
Frame = -3 / -1
Query: 645 FQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSRQLLP 466
FQ FLISLSVRPGR AI DHLLPR+ W L S RR*LIHR RQLLP
Sbjct: 420 FQKFLISLSVRPGRCDAI*DHLLPRIWWSATMWSSSCWEKQPRLRSGRR*LIHRRRQLLP 241
Query: 465 HRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLP 361
R A LG++LQ P+PC M L S SSS H P
Sbjct: 240 QRFSAASLGTELQQPTPCRMMWL*SFSSSSGDHSP 136
Score = 27.6 bits (54), Expect(2) = 3e-022
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2 / -2
Query: 1324 RTSRTGAKSRTPPARDRPGC 1265
R+ RT RTPPA GC
Sbjct: 626 RSRRTAGTGRTPPAASERGC 567
>emb|X70878.1|HVMYB3 H.vulgare myb3 mRNA
Length = 1270
Score = 175 bits (377), Expect = 5e-043
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
+++G W+ EED+ L N+I HG G W S+P+ A L RCGKSCRLRWINYLR D+KRG S
Sbjct: 104 VRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCFS 283
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
++EED I+ LH LGNRWS IASHLPGRTDNEIKN+WNS + +++
Sbjct: 284 QQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKL 418
>gb|CB877704.1|CB877704 HP05O05T HP Hordeum vulgare subsp. vulgare cDNA clone HP05O05
5-PRIME, mRNA sequence
Length = 520
Score = 175 bits (376), Expect = 7e-043
Identities = 65/107 (60%), Positives = 82/107 (76%)
Frame = +2 / +1
Query: 341 EKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKR 520
E+ L+RG WT +ED L NYI++HGEG W +L + AGL R GKSCRLRW+NYLR DVKR
Sbjct: 127 EEAELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLRRTGKSCRLRWLNYLRPDVKR 306
Query: 521 GNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
GN + +E+ +I+ LH+ GNRWS IA HLPGRTDNEIKNYW + + +
Sbjct: 307 GNFTADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQK 447
>gb|BG369720.1|BG369720 HVSMEi0025K10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025K10f, mRNA sequence
Length = 718
Score = 174 bits (375), Expect = 1e-042
Identities = 65/107 (60%), Positives = 82/107 (76%)
Frame = +2 / +3
Query: 341 EKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKR 520
E+ L+RG WT +ED L NYI++HGEG W +L + AGL R GKSCRLRW+NYLR DVKR
Sbjct: 120 EEAELRRGPWTVDEDLTLINYISDHGEGRWNALARAAGLRRTGKSCRLRWLNYLRPDVKR 299
Query: 521 GNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
GN + +E+ +I+ LH+ GNRWS IA HLPGRTDNEIKNYW + + +
Sbjct: 300 GNFTADEQLLILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVPK 440
>gb|CA013607.1|CA013607 HT08P20r HT Hordeum vulgare subsp. vulgare cDNA clone HT08P20
5-PRIME, mRNA sequence
Length = 569
Score = 174 bits (375), Expect = 1e-042
Identities = 60/103 (58%), Positives = 84/103 (81%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
LK+G WT+ ED +L +Y+ +HGEG+W ++ KN GL RCGKSCRLRW N+LR ++K+G +
Sbjct: 173 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 352
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
EEE +II+LH+ +GN+W+ +A+HLPGRTDNEIKNYWN+ + R
Sbjct: 353 PEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 481
>gb|CA014662.1|CA014662 HT11P22r HT Hordeum vulgare subsp. vulgare cDNA clone HT11P22
5-PRIME, mRNA sequence
Length = 613
Score = 174 bits (375), Expect = 1e-042
Identities = 60/103 (58%), Positives = 84/103 (81%)
Frame = +2 / +3
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
LK+G WT+ ED +L +Y+ +HGEG+W ++ KN GL RCGKSCRLRW N+LR ++K+G +
Sbjct: 183 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 362
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
EEE +II+LH+ +GN+W+ +A+HLPGRTDNEIKNYWN+ + R
Sbjct: 363 PEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 491
>emb|X87690.1|HVRNAGAM1 H.vulgare mRNA for GAMyb protein
Length = 2263
Score = 174 bits (375), Expect = 1e-042
Identities = 60/103 (58%), Positives = 84/103 (81%)
Frame = +2 / +2
Query: 353 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 532
LK+G WT+ ED +L +Y+ +HGEG+W ++ KN GL RCGKSCRLRW N+LR ++K+G +
Sbjct: 398 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFT 577
Query: 533 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSR 661
EEE +II+LH+ +GN+W+ +A+HLPGRTDNEIKNYWN+ + R
Sbjct: 578 PEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 706
>gb|CA002506.1|CA002506 HS07L12r HS Hordeum vulgare subsp. vulgare cDNA clone HS07L12
5-PRIME, mRNA sequence
Length = 514
Score = 173 bits (372), Expect = 3e-042
Identities = 64/104 (61%), Positives = 79/104 (75%)
Frame = +2 / +1
Query: 356 KRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISK 535
++G W+ EEDQ L +YI HG G W +LP AGL R GKSCRLRWINYLR +K G S
Sbjct: 166 RKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSA 345
Query: 536 EEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
EEE+ ++ LHA LGN+WS IA HLPGRTDNE+KNYWNS+L +++
Sbjct: 346 EEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRV 477
Score = 110 bits (235), Expect = 2e-023
Identities = 55/99 (55%), Positives = 57/99 (57%)
Frame = -3 / -3
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSR 478
LR EFQ*FL SLSV PG+ AI DHLLPR AW + RR*LIHRS
Sbjct: 467 LR*EFQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSSSAENMPCFSPGRR*LIHRSL 288
Query: 477 QLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLP 361
QLLP R PA GS LQ P PC M* S WSSS H P
Sbjct: 287 QLLPFRWSPALAGSALQQPWPCRRM*SRSFWSSSGDHSP 171
>gb|CB882601.1|CB882601 HL02F10w HL Hordeum vulgare subsp. vulgare cDNA clone HL02F10
3-PRIME, mRNA sequence
Length = 610
Score = 173 bits (372), Expect = 3e-042
Identities = 64/104 (61%), Positives = 79/104 (75%)
Frame = +2 / +1
Query: 356 KRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISK 535
++G W+ EEDQ L +YI HG G W +LP AGL R GKSCRLRWINYLR +K G S
Sbjct: 151 RKGLWSPEEDQKLRDYILRHGHGCWSALPAKAGLQRNGKSCRLRWINYLRPGLKHGMFSA 330
Query: 536 EEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
EEE+ ++ LHA LGN+WS IA HLPGRTDNE+KNYWNS+L +++
Sbjct: 331 EEEETVMSLHAALGNKWSRIARHLPGRTDNEVKNYWNSYLKKRV 462
Score = 110 bits (235), Expect = 2e-023
Identities = 55/99 (55%), Positives = 57/99 (57%)
Frame = -3 / -3
Query: 657 LRCEFQ*FLISLSVRPGRWLAIRDHLLPRVAWXXXXXXXXXXXXXXXLTSARR*LIHRSR 478
LR EFQ*FL SLSV PG+ AI DHLLPR AW + RR*LIHRS
Sbjct: 452 LR*EFQ*FLTSLSVLPGKCRAILDHLLPRAAWRLITVSSSSAENMPCFSPGRR*LIHRSL 273
Query: 477 QLLPHRSRPAFLGSDLQDPSPCSAM*LASNWSSSAVHLP 361
QLLP R PA GS LQ P PC M* S WSSS H P
Sbjct: 272 QLLPFRWSPALAGSALQQPWPCRRM*SRSFWSSSGDHSP 156
>emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcription factor
Length = 1180
Score = 173 bits (372), Expect = 3e-042
Identities = 66/98 (67%), Positives = 79/98 (80%)
Frame = +2 / +3
Query: 374 AEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDII 553
A E ++L +I HG G+WR+LPK AGLLRCGKSCRLRWINYLR D+KRGN S EEE I
Sbjct: 51 AAECKILVAHIHSHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSDEEEQSI 230
Query: 554 IKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 667
I+LH LGNRWS IA+ LPGRTDNEIKN W++HL +++
Sbjct: 231 IQLHQLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 344
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 703,224,285
Number of Sequences: 312970
Number of extensions: 13282222
Number of successful extensions: 195729
Number of sequences better than 1.0e-020: 136
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 19867865721
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)