TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L46398.2.1
(1263 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 204 e-103
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 204 1e-080
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 204 1e-076
gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. v... 204 6e-069
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 158 6e-060
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 125 4e-055
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 125 2e-054
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 121 5e-053
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 130 1e-052
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 130 1e-052
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 130 1e-052
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 130 1e-052
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 130 1e-052
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 118 2e-052
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 118 2e-052
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 118 2e-052
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 118 2e-052
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 118 2e-052
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 118 2e-052
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 118 2e-052
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 118 2e-052
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 118 2e-052
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 118 2e-052
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 118 2e-052
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 118 2e-052
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 118 2e-052
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 118 2e-052
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 118 2e-052
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 118 2e-052
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 118 1e-051
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 118 1e-051
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 124 2e-051
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 118 2e-051
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 118 2e-051
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 118 2e-051
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 123 3e-051
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 118 4e-051
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 116 6e-051
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 130 8e-051
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 123 1e-050
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 118 1e-050
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 118 1e-050
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 118 1e-050
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 118 2e-050
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 121 4e-050
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 109 1e-049
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 117 5e-049
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 116 1e-048
gb|BE195618.2|BE195618 HVSMEh0089O24f Hordeum vulgare 5-45 ... 101 3e-048
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 118 3e-048
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 118 3e-048
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 118 4e-048
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 132 6e-048
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 118 6e-048
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 191 8e-048
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 190 1e-047
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 132 1e-047
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 118 2e-047
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 118 2e-047
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 189 2e-047
gb|BE193714.2|BE193714 HVSMEh0082E10f Hordeum vulgare 5-45 ... 101 3e-047
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 188 4e-047
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 107 5e-047
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 107 5e-047
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 188 6e-047
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 132 9e-047
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 187 1e-046
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 186 2e-046
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 186 2e-046
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 118 5e-046
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 118 5e-046
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 123 7e-046
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 118 2e-045
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 183 2e-045
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 130 2e-045
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 116 4e-045
gb|BU995060.1|BU995060 HM09B05r HM Hordeum vulgare subsp. v... 95 1e-044
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 130 3e-044
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 118 4e-044
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 178 6e-044
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 178 6e-044
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 178 6e-044
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 177 1e-043
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 130 2e-043
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 130 2e-043
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 130 2e-043
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 118 2e-043
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 118 3e-043
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 175 4e-043
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 174 8e-043
gb|BF258470.2|BF258470 HVSMEf0015M23f Hordeum vulgare seedl... 174 8e-043
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 174 8e-043
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 118 9e-043
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 118 9e-043
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 173 2e-042
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 113 2e-042
gb|CA024291.1|CA024291 HZ48O08r HZ Hordeum vulgare subsp. v... 95 3e-042
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 124 5e-042
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 101 5e-042
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 171 5e-042
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 107 9e-042
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 167 9e-041
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 167 9e-041
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 132 2e-040
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 165 4e-040
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 164 8e-040
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 163 2e-039
gb|CA026975.1|CA026975 HZ57I06r HZ Hordeum vulgare subsp. v... 90 2e-039
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 162 3e-039
gb|BI776503.2|BI776503 EBpi05_SQ001_K07_R pistil, 8 DPA, no... 100 9e-039
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 160 1e-038
gb|CA031703.1|CA031703 HX10O06r HX Hordeum vulgare subsp. v... 100 6e-038
gb|BI776993.2|BI776993 EBpi03_SQ001_J15_R pistil, 4 DPA, no... 90 6e-038
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 157 1e-037
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 118 1e-036
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 153 2e-036
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 117 5e-036
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 118 1e-035
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 118 2e-035
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 149 2e-035
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 149 2e-035
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 149 2e-035
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 149 2e-035
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 149 2e-035
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 101 3e-035
gb|BU967322.1|BU967322 HB03O23r BC Hordeum vulgare subsp. v... 101 1e-034
gb|BQ753907.1|BQ753907 EBca01_SQ002_D17_R carpel, pre-anthe... 105 1e-034
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 117 2e-034
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 101 3e-034
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 118 5e-034
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 118 5e-034
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 123 7e-034
gb|BU973061.1|BU973061 HB23K04r BC Hordeum vulgare subsp. v... 100 1e-033
gb|CA009054.1|CA009054 HU13A17r HU Hordeum vulgare subsp. v... 99 2e-033
gb|CA009157.1|CA009157 HU13F11r HU Hordeum vulgare subsp. v... 99 2e-033
gb|BI958127.1|BI958127 HVSMEn0013H24f Hordeum vulgare rachi... 143 3e-033
gb|BQ469990.1|BQ469990 HX01H06T HX Hordeum vulgare subsp. v... 143 3e-033
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 143 3e-033
emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box ... 100 9e-033
gb|BQ459169.1|BQ459169 HA02B21r HA Hordeum vulgare subsp. v... 99 9e-033
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 116 1e-032
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 132 1e-032
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 111 2e-032
gb|AY541065.1| Hordeum vulgare subsp. vulgare APETALA3-like... 103 6e-032
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 127 1e-031
emb|AJ249142.1|HVU249142 Hordeum vulgare mRNA for MADS-box ... 100 2e-031
gb|BU994760.1|BU994760 HM08C02r HM Hordeum vulgare subsp. v... 103 3e-031
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 132 5e-031
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 132 5e-031
gb|BJ543924.1|BJ543924 BJ543924 K. Sato unpublished cDNA li... 105 5e-031
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 132 5e-031
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 128 3e-030
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 128 3e-030
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 128 3e-030
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 101 6e-030
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 126 2e-029
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 130 2e-029
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 130 2e-029
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 130 2e-029
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 130 2e-029
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 130 2e-029
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 130 2e-029
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 110 3e-029
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 128 5e-029
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 128 5e-029
gb|BF264447.3|BF264447 HV_CEa0009H05f Hordeum vulgare seedl... 84 6e-029
gb|CK122890.1|CK122890 BES1824101b13 BES1824 Hordeum vulgar... 105 1e-028
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 127 1e-028
gb|AV932969.1|AV932969 AV932969 K. Sato unpublished cDNA li... 107 5e-028
gb|BM442073.2|BM442073 EBan01_SQ002_B20_R anther, yellow st... 100 1e-026
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 119 3e-026
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 112 6e-026
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 102 5e-025
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 102 7e-025
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 102 7e-025
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 102 7e-025
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 102 7e-025
gb|AL509038.1|AL509038 AL509038 Hordeum vulgare Barke devel... 101 2e-024
gb|CK124005.1|CK124005 BES1824106h14 BES1824 Hordeum vulgar... 101 2e-024
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 112 4e-024
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 112 4e-024
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 111 6e-024
gb|BQ462617.1|BQ462617 HI01H19T HI Hordeum vulgare subsp. v... 102 6e-024
gb|BM442365.2|BM442365 EBan01_SQ002_P21_R anther, yellow st... 99 2e-023
gb|CA026363.1|CA026363 HZ55L07r HZ Hordeum vulgare subsp. v... 109 3e-023
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 108 8e-023
gb|BU997414.1|BU997414 HI07O14r HI Hordeum vulgare subsp. v... 108 8e-023
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 105 5e-022
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 105 7e-022
gb|BF627401.2|BF627401 HVSMEb0004M05f Hordeum vulgare seedl... 104 1e-021
gb|BU981281.1|BU981281 HA23C12r HA Hordeum vulgare subsp. v... 103 2e-021
gb|BU995514.1|BU995514 HM10H18r HM Hordeum vulgare subsp. v... 100 2e-021
gb|BG301340.1|BG301340 HVSMEb0020P03f Hordeum vulgare seedl... 103 3e-021
gb|BU998520.1|BU998520 HI11F04r HI Hordeum vulgare subsp. v... 102 3e-021
gb|CA025681.1|CA025681 HZ52N13r HZ Hordeum vulgare subsp. v... 102 3e-021
gb|CA032371.1|CA032371 HX12N03r HX Hordeum vulgare subsp. v... 102 3e-021
gb|CA020907.1|CA020907 HZ38F18r HZ Hordeum vulgare subsp. v... 99 4e-021
gb|CA021417.1|CA021417 HZ40A18r HZ Hordeum vulgare subsp. v... 99 4e-021
gb|BF629182.3|BF629182 HVSMEb0010D12f Hordeum vulgare seedl... 99 6e-021
gb|BU979939.1|BU979939 HA17O10r HA Hordeum vulgare subsp. v... 101 9e-021
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA,
complete cds
Length = 1464
Score = 204 bits (439), Expect(4) = 1e-069
Identities = 86/106 (81%), Positives = 96/106 (90%)
Frame = +1 / +3
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C +N ALSE+QSWYQEMSKL+AKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE
Sbjct: 600 CCYNAQDSNGALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 779
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
C+LSQARQRKTQ+MMEQVEELRR ER LG++NRQLKHKL+AEG ++
Sbjct: 780 CSLSQARQRKTQLMMEQVEELRRKERQLGDINRQLKHKLDAEGSNS 917
Score = 189 bits (408), Expect(4) = e-103
Identities = 80/86 (93%), Positives = 81/86 (94%)
Frame = +1 / +3
Query: 190 EEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYE 369
EE MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYE
Sbjct: 375 EEEIMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYE 554
Query: 370 FGSAGVTKTLERYQHCCYNAQDSNNS 447
FGSAG TKTLERYQHCCYNAQDSN +
Sbjct: 555 FGSAGTTKTLERYQHCCYNAQDSNGA 632
Score = 139 bits (298), Expect(4) = e-103
Identities = 63/95 (66%), Positives = 71/95 (74%)
Frame = +3 / +2
Query: 441 Q*CTL*ISELVPGNVKTEGKIRGLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKT 620
Q CT+* SELVPGNVK +GKI AA+SE LAW GPW + E AAA ETARM VTG+T
Sbjct: 623 QWCTI*NSELVPGNVKAKGKI*SFAANSETLAWGGPWTAKRERTAAAGETARMFTVTGQT 802
Query: 621 EKDASYDGASGRASQNGASPGRNEQATQTQARS*R 725
KDA+YDGA G SQ GAS GR++QATQ QAR *R
Sbjct: 803 AKDATYDGAGGGTSQEGASAGRHQQATQAQARR*R 907
Score = 136 bits (291), Expect(5) = 6e-077
Identities = 64/99 (64%), Positives = 71/99 (71%)
Frame = -3 / -1
Query: 739 CSCYSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSH 560
C C LQ RAC *VAC LP DAP CE P APS*+ASF+V PVT +ILAVS AAA+ S
Sbjct: 921 CCCCCLQRRACA*VAC*CLPADAPSCEVPPPAPS*VASFAVWPVTVNILAVSPAAAVLSR 742
Query: 559 SVAQGPRQASASECAARPRILPSVLTFPGTSSEIQRVHY 443
QGP QAS SE AA+ +ILP LTFPGTSSE Q VH+
Sbjct: 741 LAVQGPPQASVSEFAAKLQILPLALTFPGTSSEFQIVHH 625
Score = 130 bits (278), Expect(4) = 4e-036
Identities = 62/115 (53%), Positives = 71/115 (61%)
Frame = +2 / +1
Query: 443 IVHSLNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH*V*XXXXXXXXXXXVLCHRQDR 622
+VH L LRAGTRKCQ+* QN + CS LR TCL RTL * * V CHR D
Sbjct: 625 MVHYLKLRAGTRKCQS*RQNLKLCSELRDTCLGRTLDR*A*KNCSSWRNS*NVHCHRPDS 804
Query: 623 ERRKL*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATTQPCSMPPAGQLPAAPS 787
ERR L*WS+W++FA RSV+WE TGNS+TSS LKA T + LPA S
Sbjct: 805 ERRNL*WSRWRNFAGRSVSWETSTGNSSTSSTLKAATATTTGPCSRSPGLPAPSS 969
Score = 124 bits (265), Expect(4) = 2e-064
Identities = 57/91 (62%), Positives = 58/91 (63%)
Frame = -2 / -3
Query: 734 LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXXXXXXFTLS 555
LL PSASSLCLSCL I+CVF CLACD H FTLS
Sbjct: 916 LLLPSASSLCLSCLLMSPS*RSFLRSSSTCSIISCVFRCLACDSEHSSCFSSCCSSFTLS 737
Query: 554 GPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
GPRSSPSKCL*VRCKASNFA SFDISWYQL*
Sbjct: 736 GPRSSPSKCL*VRCKASNFAFSFDISWYQL* 644
Score = 113 bits (241), Expect(5) = 6e-077
Identities = 54/82 (65%), Positives = 57/82 (69%)
Frame = -2 / -3
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQC YLS V V PALPNS*SLPR EKMM AFL RPLRRLEKVT RLIL
Sbjct: 604 QQCWYLSNVFVVPALPNS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEKVTCRLIL 425
Query: 239 FSIRFSSTRPLPMPTSSDPRSE 174
FS+RFSST PLPM +SS S+
Sbjct: 424 FSMRFSSTLPLPMISSSSSSSQ 359
Score = 107 bits (228), Expect(4) = 2e-064
Identities = 51/84 (60%), Positives = 56/84 (66%)
Frame = -1 / -2
Query: 441 VGILSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGE 262
+GILSI+AA+L+P F ER LGVAEHGELVGLLE+AVAALGE
Sbjct: 626 IGILSIIAAVLVPLQCFCCAGAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGE 447
Query: 261 GDLAVDLVLDPLQLDASPPHADLL 190
GDL VDLVLD LQ D SPPH LL
Sbjct: 446 GDLPVDLVLDALQFDPSPPHDLLL 375
Score = 63.8 bits (133), Expect(4) = e-103
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +1 / +3
Query: 811 QVHPPAHSVAMDCEPTLQIGYPHHQFPPPEAVNN 912
Q P HS AMDCEPTLQIGYPHHQF P+ V N
Sbjct: 1014 QQQHPNHSAAMDCEPTLQIGYPHHQFAAPDQVAN 1115
Score = 50.6 bits (104), Expect(4) = 1e-069
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3 / +2
Query: 225 EADREQDQPPGHLLQAPQRPAQE 293
EA REQDQP GHLLQAPQRP QE
Sbjct: 410 EAHREQDQPAGHLLQAPQRPPQE 478
Score = 49.2 bits (101), Expect(5) = 6e-077
Identities = 23/33 (69%), Positives = 24/33 (72%)
Frame = -2 / -3
Query: 914 ILLTASGGGNW**GYPICRVGSQSIATEWAGGC 816
+L T SG N **GYPICRVGSQSIA E G C
Sbjct: 1117 LLAT*SGAAN***GYPICRVGSQSIAAE*LGCC 1019
Score = 40.5 bits (82), Expect(4) = e-103
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 908 IISQGAPPQARTTSCWDGFFE 970
I APP+ RTTSCW GFFE
Sbjct: 1117 IFHGAAPPEGRTTSCWGGFFE 1179
Score = 40.0 bits (81), Expect(5) = 6e-077
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -2 / -3
Query: 968 QRTHPSMKLFSPVAALLGILLTASGGG 888
QRTHPSMKLFSP ALL +L A+ G
Sbjct: 1177 QRTHPSMKLFSPPGALLRGILLAT*SG 1097
Score = 39.6 bits (80), Expect(4) = 2e-064
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -3 / -1
Query: 913 YY*LPQGAETGDEGTRFAEWVHSP*Q 836
Y+ Q T DEGT+FAEWVHSP Q
Sbjct: 1116 YWLPDQEPRTDDEGTQFAEWVHSPSQ 1039
Score = 38.2 bits (77), Expect(4) = 1e-069
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 836 LLWTVNPLCKSGTLITSFRPL 898
L WTVNPLCK GTLI S R L
Sbjct: 1039 LRWTVNPLCKLGTLIISSRLL 1101
Score = 37.7 bits (76), Expect(4) = 1e-069
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +1 / +3
Query: 889 PPPEAVNNIPRSAATGENNFMLGWVL*VLLLI 984
P A N SA GENNFMLGWVL* + L+
Sbjct: 1098 PDQVANNIPRSSAPGGENNFMLGWVL*AIWLL 1193
Score = 33.1 bits (66), Expect(4) = 2e-064
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 972 NSKNPSQHEVVLACGGA 922
+SKNP QHEVVL GGA
Sbjct: 1181 SSKNPPQHEVVLPSGGA 1131
Score = 30.4 bits (60), Expect(4) = 4e-036
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3 / +2
Query: 918 KERRHRREQLHAGMGSLS 971
++R R EQLHAG+GSLS
Sbjct: 1127 EQRPRRGEQLHAGVGSLS 1180
Score = 25.4 bits (49), Expect(5) = 6e-077
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 439 WNLEHCSSNVDT 404
WNLEH SS+V T
Sbjct: 624 WNLEHYSSSVGT 589
Score = 24.0 bits (46), Expect(4) = 4e-036
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 402 KVSTLLLQCSRFQ 440
+V TLLL CSRFQ
Sbjct: 587 EVPTLLL*CSRFQ 625
Score = 23.1 bits (44), Expect(4) = 4e-036
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +2
Query: 837 CYGL*THSAN 866
C GL*THSAN
Sbjct: 1040 CDGL*THSAN 1069
>gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O149 5-PRIME, mRNA sequence
Length = 778
Score = 204 bits (439), Expect(2) = 9e-060
Identities = 86/106 (81%), Positives = 96/106 (90%)
Frame = +1 / +2
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C +N ALSE+QSWYQEMSKL+AKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE
Sbjct: 203 CCYNAQDSNGALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 382
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
C+LSQARQRKTQ+MMEQVEELRR ER LG++NRQLKHKL+AEG ++
Sbjct: 383 CSLSQARQRKTQLMMEQVEELRRKERQLGDINRQLKHKLDAEGSNS 520
Score = 177 bits (382), Expect(4) = 1e-080
Identities = 74/78 (94%), Positives = 75/78 (96%)
Frame = +1 / +2
Query: 214 RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGVTK 393
RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSAG TK
Sbjct: 2 RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTK 181
Query: 394 TLERYQHCCYNAQDSNNS 447
TLERYQHCCYNAQDSN +
Sbjct: 182 TLERYQHCCYNAQDSNGA 235
Score = 139 bits (298), Expect(4) = 1e-080
Identities = 63/95 (66%), Positives = 71/95 (74%)
Frame = +3 / +1
Query: 441 Q*CTL*ISELVPGNVKTEGKIRGLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKT 620
Q CT+* SELVPGNVK +GKI AA+SE LAW GPW + E AAA ETARM VTG+T
Sbjct: 226 QWCTI*NSELVPGNVKAKGKI*SFAANSETLAWGGPWTAKRERTAAAGETARMFTVTGQT 405
Query: 621 EKDASYDGASGRASQNGASPGRNEQATQTQARS*R 725
KDA+YDGA G SQ GAS GR++QATQ QAR *R
Sbjct: 406 AKDATYDGAGGGTSQEGASAGRHQQATQAQARR*R 510
Score = 136 bits (291), Expect(4) = 4e-057
Identities = 64/99 (64%), Positives = 71/99 (71%)
Frame = -3 / -3
Query: 739 CSCYSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSH 560
C C LQ RAC *VAC LP DAP CE P APS*+ASF+V PVT +ILAVS AAA+ S
Sbjct: 524 CCCCCLQRRACA*VAC*CLPADAPSCEVPPPAPS*VASFAVWPVTVNILAVSPAAAVLSR 345
Query: 559 SVAQGPRQASASECAARPRILPSVLTFPGTSSEIQRVHY 443
QGP QAS SE AA+ +ILP LTFPGTSSE Q VH+
Sbjct: 344 LAVQGPPQASVSEFAAKLQILPLALTFPGTSSEFQIVHH 228
Score = 128 bits (274), Expect(2) = 3e-030
Identities = 58/99 (58%), Positives = 66/99 (66%)
Frame = +2 / +3
Query: 443 IVHSLNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH*V*XXXXXXXXXXXVLCHRQDR 622
+VH L LRAGTRKCQ+* QN + CS LR TCL RTL * * V CHR D
Sbjct: 228 MVHYLKLRAGTRKCQS*RQNLKLCSELRDTCLGRTLDR*A*KNCSSWRNS*NVHCHRPDS 407
Query: 623 ERRKL*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATT 739
ERR L*WS+W++FA RSV+WE TGNS+TSS LKA T
Sbjct: 408 ERRNL*WSRWRNFAGRSVSWETSTGNSSTSSTLKAATAT 524
Score = 124 bits (265), Expect(2) = 4e-050
Identities = 57/91 (62%), Positives = 58/91 (63%)
Frame = -2 / -2
Query: 734 LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXXXXXXFTLS 555
LL PSASSLCLSCL I+CVF CLACD H FTLS
Sbjct: 519 LLLPSASSLCLSCLLMSPS*RSFLRSSSTCSIISCVFRCLACDSEHSSCFSSCCSSFTLS 340
Query: 554 GPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
GPRSSPSKCL*VRCKASNFA SFDISWYQL*
Sbjct: 339 GPRSSPSKCL*VRCKASNFAFSFDISWYQL* 247
Score = 99.1 bits (210), Expect(4) = 4e-057
Identities = 47/68 (69%), Positives = 48/68 (70%)
Frame = -2 / -2
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQC YLS V V PALPNS*SLPR EKMM AFL RPLRRLEKVT RLIL
Sbjct: 207 QQCWYLSNVFVVPALPNS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEKVTCRLIL 28
Query: 239 FSIRFSST 216
FS+RFSST
Sbjct: 27 FSMRFSST 4
Score = 95.0 bits (201), Expect(2) = 4e-050
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = -1 / -1
Query: 441 VGILSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGE 262
+GILSI+AA+L+P F ER LGVAEHGELVGLLE+AVAALGE
Sbjct: 229 IGILSIIAAVLVPLQCFCCAGAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGE 50
Query: 261 GDLAVDLVLDPLQLD 217
GDL VDLVLD LQ D
Sbjct: 49 GDLPVDLVLDALQFD 5
Score = 50.6 bits (104), Expect(2) = 9e-060
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 225 EADREQDQPPGHLLQAPQRPAQE 293
EA REQDQP GHLLQAPQRP QE
Sbjct: 13 EAHREQDQPAGHLLQAPQRPPQE 81
Score = 25.4 bits (49), Expect(4) = 4e-057
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 439 WNLEHCSSNVDT 404
WNLEH SS+V T
Sbjct: 227 WNLEHYSSSVGT 192
Score = 24.9 bits (48), Expect(4) = 4e-057
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -2
Query: 875 GYPICRVG 852
GYPICRVG
Sbjct: 702 GYPICRVG 679
Score = 24.0 bits (46), Expect(4) = 1e-080
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1 / +2
Query: 850 EPTLQIGYP 876
+PTLQIGYP
Sbjct: 677 KPTLQIGYP 703
Score = 24.0 bits (46), Expect(4) = 1e-080
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 823 PAHSVAMDCE 852
P HS AMDCE
Sbjct: 649 PNHSAAMDCE 678
Score = 24.0 bits (46), Expect(2) = 3e-030
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 402 KVSTLLLQCSRFQ 440
+V TLLL CSRFQ
Sbjct: 190 EVPTLLL*CSRFQ 228
>gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. vulgare cDNA clone HF04I23
5-PRIME, mRNA sequence
Length = 649
Score = 204 bits (439), Expect(2) = 8e-060
Identities = 86/106 (81%), Positives = 96/106 (90%)
Frame = +1 / +2
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C +N ALSE+QSWYQEMSKL+AKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE
Sbjct: 197 CCYNAQDSNGALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 376
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
C+LSQARQRKTQ+MMEQVEELRR ER LG++NRQLKHKL+AEG ++
Sbjct: 377 CSLSQARQRKTQLMMEQVEELRRKERQLGDINRQLKHKLDAEGSNS 514
Score = 168 bits (361), Expect(2) = 1e-076
Identities = 69/74 (93%), Positives = 71/74 (95%)
Frame = +1 / +2
Query: 226 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGVTKTLER 405
+RIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSAG TKTLER
Sbjct: 8 RRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLER 187
Query: 406 YQHCCYNAQDSNNS 447
YQHCCYNAQDSN +
Sbjct: 188 YQHCCYNAQDSNGA 229
Score = 139 bits (298), Expect(2) = 1e-076
Identities = 63/95 (66%), Positives = 71/95 (74%)
Frame = +3 / +1
Query: 441 Q*CTL*ISELVPGNVKTEGKIRGLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKT 620
Q CT+* SELVPGNVK +GKI AA+SE LAW GPW + E AAA ETARM VTG+T
Sbjct: 220 QWCTI*NSELVPGNVKAKGKI*SFAANSETLAWGGPWTAKRERTAAAGETARMFTVTGQT 399
Query: 621 EKDASYDGASGRASQNGASPGRNEQATQTQARS*R 725
KDA+YDGA G SQ GAS GR++QATQ QAR *R
Sbjct: 400 AKDATYDGAGGGTSQEGASAGRHQQATQAQARR*R 504
Score = 136 bits (291), Expect(3) = 2e-054
Identities = 64/99 (64%), Positives = 71/99 (71%)
Frame = -3 / -3
Query: 739 CSCYSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSH 560
C C LQ RAC *VAC LP DAP CE P APS*+ASF+V PVT +ILAVS AAA+ S
Sbjct: 518 CCCCCLQRRACA*VAC*CLPADAPSCEVPPPAPS*VASFAVWPVTVNILAVSPAAAVLSR 339
Query: 559 SVAQGPRQASASECAARPRILPSVLTFPGTSSEIQRVHY 443
QGP QAS SE AA+ +ILP LTFPGTSSE Q VH+
Sbjct: 338 LAVQGPPQASVSEFAAKLQILPLALTFPGTSSEFQIVHH 222
Score = 130 bits (278), Expect(2) = 1e-030
Identities = 62/115 (53%), Positives = 71/115 (61%)
Frame = +2 / +3
Query: 443 IVHSLNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH*V*XXXXXXXXXXXVLCHRQDR 622
+VH L LRAGTRKCQ+* QN + CS LR TCL RTL * * V CHR D
Sbjct: 222 MVHYLKLRAGTRKCQS*RQNLKLCSELRDTCLGRTLDR*A*KNCSSWRNS*NVHCHRPDS 401
Query: 623 ERRKL*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATTQPCSMPPAGQLPAAPS 787
ERR L*WS+W++FA RSV+WE TGNS+TSS LKA T + LPA S
Sbjct: 402 ERRNL*WSRWRNFAGRSVSWETSTGNSSTSSTLKAATATTTGPCSRSPGLPAPSS 566
Score = 124 bits (265), Expect(2) = 3e-048
Identities = 57/91 (62%), Positives = 58/91 (63%)
Frame = -2 / -2
Query: 734 LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXXXXXXFTLS 555
LL PSASSLCLSCL I+CVF CLACD H FTLS
Sbjct: 513 LLLPSASSLCLSCLLMSPS*RSFLRSSSTCSIISCVFRCLACDSEHSSCFSSCCSSFTLS 334
Query: 554 GPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
GPRSSPSKCL*VRCKASNFA SFDISWYQL*
Sbjct: 333 GPRSSPSKCL*VRCKASNFAFSFDISWYQL* 241
Score = 90.4 bits (191), Expect(3) = 2e-054
Identities = 43/64 (67%), Positives = 44/64 (68%)
Frame = -2 / -2
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLIL 240
QQC YLS V V PALPNS*SLPR EKMM AFL RPLRRLEKVT RLIL
Sbjct: 201 QQCWYLSNVFVVPALPNS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEKVTCRLIL 22
Query: 239 FSIR 228
FS+R
Sbjct: 21 FSMR 10
Score = 88.6 bits (187), Expect(2) = 3e-048
Identities = 42/70 (60%), Positives = 47/70 (67%)
Frame = -1 / -1
Query: 441 VGILSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGE 262
+GILSI+AA+L+P F ER LGVAEHGELVGLLE+AVAALGE
Sbjct: 223 IGILSIIAAVLVPLQCFCCAGAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGE 44
Query: 261 GDLAVDLVLD 232
GDL VDLVLD
Sbjct: 43 GDLPVDLVLD 14
Score = 50.6 bits (104), Expect(2) = 8e-060
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 225 EADREQDQPPGHLLQAPQRPAQE 293
EA REQDQP GHLLQAPQRP QE
Sbjct: 7 EAHREQDQPAGHLLQAPQRPPQE 75
Score = 25.4 bits (49), Expect(3) = 2e-054
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 439 WNLEHCSSNVDT 404
WNLEH SS+V T
Sbjct: 221 WNLEHYSSSVGT 186
Score = 24.0 bits (46), Expect(2) = 1e-030
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 402 KVSTLLLQCSRFQ 440
+V TLLL CSRFQ
Sbjct: 184 EVPTLLL*CSRFQ 222
>gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. vulgare cDNA clone HA24A15
5-PRIME, mRNA sequence
Length = 600
Score = 204 bits (439), Expect(2) = 3e-053
Identities = 86/106 (81%), Positives = 96/106 (90%)
Frame = +1 / +3
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C +N ALSE+QSWYQEMSKL+AKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE
Sbjct: 165 CCYNAQDSNGALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 344
Query: 598 CALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLEAEGCSN 735
C+LSQARQRKTQ+MMEQVEELRR ER LG++NRQLKHKL+AEG ++
Sbjct: 345 CSLSQARQRKTQLMMEQVEELRRKERQLGDINRQLKHKLDAEGSNS 482
Score = 142 bits (305), Expect(2) = 6e-069
Identities = 58/62 (93%), Positives = 59/62 (95%)
Frame = +1 / +3
Query: 262 FSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGVTKTLERYQHCCYNAQDSN 441
FSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSAG TKTLERYQHCCYNAQDSN
Sbjct: 12 FSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLERYQHCCYNAQDSN 191
Query: 442 NS 447
+
Sbjct: 192 GA 197
Score = 139 bits (298), Expect(2) = 6e-069
Identities = 63/95 (66%), Positives = 71/95 (74%)
Frame = +3 / +2
Query: 441 Q*CTL*ISELVPGNVKTEGKIRGLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKT 620
Q CT+* SELVPGNVK +GKI AA+SE LAW GPW + E AAA ETARM VTG+T
Sbjct: 188 QWCTI*NSELVPGNVKAKGKI*SFAANSETLAWGGPWTAKRERTAAAGETARMFTVTGQT 367
Query: 621 EKDASYDGASGRASQNGASPGRNEQATQTQARS*R 725
KDA+YDGA G SQ GAS GR++QATQ QAR *R
Sbjct: 368 AKDATYDGAGGGTSQEGASAGRHQQATQAQARR*R 472
Score = 136 bits (291), Expect(3) = 6e-049
Identities = 64/99 (64%), Positives = 71/99 (71%)
Frame = -3 / -1
Query: 739 CSCYSLQLRACV*VACSFLPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSH 560
C C LQ RAC *VAC LP DAP CE P APS*+ASF+V PVT +ILAVS AAA+ S
Sbjct: 486 CCCCCLQRRACA*VAC*CLPADAPSCEVPPPAPS*VASFAVWPVTVNILAVSPAAAVLSR 307
Query: 559 SVAQGPRQASASECAARPRILPSVLTFPGTSSEIQRVHY 443
QGP QAS SE AA+ +ILP LTFPGTSSE Q VH+
Sbjct: 306 LAVQGPPQASVSEFAAKLQILPLALTFPGTSSEFQIVHH 190
Score = 130 bits (278), Expect(2) = 1e-030
Identities = 62/115 (53%), Positives = 71/115 (61%)
Frame = +2 / +1
Query: 443 IVHSLNLRAGTRKCQN*GQNSRPCSALRGTCLARTLGH*V*XXXXXXXXXXXVLCHRQDR 622
+VH L LRAGTRKCQ+* QN + CS LR TCL RTL * * V CHR D
Sbjct: 190 MVHYLKLRAGTRKCQS*RQNLKLCSELRDTCLGRTLDR*A*KNCSSWRNS*NVHCHRPDS 369
Query: 623 ERRKL*WSKWKSFAERSVTWEK*TGNSNTSSKLKAVATTQPCSMPPAGQLPAAPS 787
ERR L*WS+W++FA RSV+WE TGNS+TSS LKA T + LPA S
Sbjct: 370 ERRNL*WSRWRNFAGRSVSWETSTGNSSTSSTLKAATATTTGPCSRSPGLPAPSS 534
Score = 124 bits (265), Expect(2) = 2e-042
Identities = 57/91 (62%), Positives = 58/91 (63%)
Frame = -2 / -3
Query: 734 LLQPSASSLCLSCLFXXXXXXXXXXXXXXXXXITCVFLCLACDKAHXXXXXXXXXXFTLS 555
LL PSASSLCLSCL I+CVF CLACD H FTLS
Sbjct: 481 LLLPSASSLCLSCLLMSPS*RSFLRSSSTCSIISCVFRCLACDSEHSSCFSSCCSSFTLS 302
Query: 554 GPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
GPRSSPSKCL*VRCKASNFA SFDISWYQL*
Sbjct: 301 GPRSSPSKCL*VRCKASNFAFSFDISWYQL* 209
Score = 72.1 bits (151), Expect(3) = 6e-049
Identities = 34/53 (64%), Positives = 34/53 (64%)
Frame = -2 / -3
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEK 261
QQC YLS V V PALPNS*SLPR EKMM AFL RPLRRLEK
Sbjct: 169 QQCWYLSNVFVVPALPNS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEK 11
Score = 68.9 bits (144), Expect(2) = 2e-042
Identities = 33/60 (55%), Positives = 38/60 (63%)
Frame = -1 / -2
Query: 441 VGILSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGE 262
+GILSI+AA+L+P F ER LGVAEHGELVGLLE+AVAALGE
Sbjct: 191 IGILSIIAAVLVPLQCFCCAGAAELVELAAAGEDDERHLGVAEHGELVGLLEEAVAALGE 12
Score = 25.8 bits (50), Expect(2) = 3e-053
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 261 LLQAPQRPAQE 293
LLQAPQRP QE
Sbjct: 11 LLQAPQRPPQE 43
Score = 25.4 bits (49), Expect(3) = 6e-049
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 439 WNLEHCSSNVDT 404
WNLEH SS+V T
Sbjct: 189 WNLEHYSSSVGT 154
Score = 24.0 bits (46), Expect(2) = 1e-030
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3 / +2
Query: 402 KVSTLLLQCSRFQ 440
+V TLLL CSRFQ
Sbjct: 152 EVPTLLL*CSRFQ 190
>gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024K11f, mRNA sequence
Length = 885
Score = 158 bits (339), Expect(3) = 6e-060
Identities = 65/69 (94%), Positives = 66/69 (95%)
Frame = +1 / +1
Query: 241 KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSAGVTKTLERYQHCC 420
KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFGSAG TKTLERYQHCC
Sbjct: 1 KINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTKTLERYQHCC 180
Query: 421 YNAQDSNNS 447
YNAQDSN +
Sbjct: 181 YNAQDSNGA 207
Score = 126 bits (269), Expect(2) = 5e-032
Identities = 56/81 (69%), Positives = 64/81 (79%)
Frame = +1 / +1
Query: 418 CYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLE 597
C +N ALSE+QSWYQEMSKL+AK EALQRTQRHLLGEDLGP+SVKEL LEKQ+E
Sbjct: 175 CCYNAQDSNGALSETQSWYQEMSKLKAKLEALQRTQRHLLGEDLGPVSVKELLVLEKQVE 354
Query: 598 CALSQARQRKTQVMMEQVEEL 660
+L QA + T +MME VEEL
Sbjct: 355 WSLGQAGRGGTLLMMEHVEEL 417
Score = 92.3 bits (195), Expect(3) = 6e-060
Identities = 43/83 (51%), Positives = 52/83 (62%)
Frame = +3 / +3
Query: 441 Q*CTL*ISELVPGNVKTEGKIRGLAAHSEALAWRGPWATECEGIAAARETARMCFVTGKT 620
Q CT+* SELVPGNVK +GKI AA+SE LAW GPW E E A + ET M G+T
Sbjct: 198 QWCTI*NSELVPGNVKAKGKIGSFAANSETLAWGGPWTGERERTAGSGETGGMVTGAGRT 377
Query: 621 EKDASYDGASGRASQNGASPGRN 689
+DA+ DGA G G+ GR+
Sbjct: 378 GRDAADDGACGGTVLEGSICGRH 446
Score = 84.5 bits (178), Expect(3) = 2e-036
Identities = 36/51 (70%), Positives = 37/51 (72%)
Frame = -2 / -2
Query: 614 ACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCKASNFALSFDISWYQL* 462
AC H FTL+GPRSSPSKCL*VRCKASNFA SFDISWYQL*
Sbjct: 371 ACPSDHSTCFSRTSSSFTLTGPRSSPSKCL*VRCKASNFAFSFDISWYQL* 219
Score = 81.3 bits (171), Expect(3) = 2e-036
Identities = 39/59 (66%), Positives = 39/59 (66%)
Frame = -2 / -2
Query: 419 QQC*YLSKVLVTPALPNS*SLPRPEKMMXXXXXXXXXXXXXAFLSRPLRRLEKVTWRLI 243
QQC YLS V V PALPNS*SLPR EKMM AFL RPLRRLEKVT RLI
Sbjct: 179 QQCWYLSNVFVVPALPNS*SLPRLEKMMSATSASQSTESS*AFLRRPLRRLEKVTCRLI 3
Score = 80.3 bits (169), Expect(2) = 7e-031
Identities = 38/67 (56%), Positives = 44/67 (65%)
Frame = -1 / -1
Query: 441 VGILSIVAAMLIPF*SFSYXXXXXXXXXXXXXXXXERDLGVAEHGELVGLLEQAVAALGE 262
+GILSI+AA+L+P F ER LGVAEHGELVGLL++AVAALGE
Sbjct: 201 IGILSIIAAVLVPLQCFCCAGAAELVELAAAGEDDERHLGVAEHGELVGLLKEAVAALGE 22
Query: 261 GDLAVDL 241
GDL VDL
Sbjct: 21 GDLPVDL 1
Score = 74.4 bits (156), Expect(2) = 7e-031
Identities = 42/81 (51%), Positives = 45/81 (55%)
Frame = -3 / -3
Query: 685 LPGDAPFCEALPLAPS*LASFSVLPVTKHILAVSLAAAIPSHSVAQGPRQASASECAARP 506
LP P P APS AS V P I VS A+ S S QGP QAS SE AA+
Sbjct: 442 LPQIDPSKTVPPHAPSSAASLPVRPAPVTIPPVSPEPAVLSRSPVQGPPQASVSEFAAKL 263
Query: 505 RILPSVLTFPGTSSEIQRVHY 443
ILP LTFPGTSSE Q VH+
Sbjct: 262 PILPLALTFPGTSSEFQIVHH 200
Score = 35.9 bits (72), Expect(2) = 5e-032
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +3 / +3
Query: 243 DQPPGHLLQAPQRP 284
DQP GHLLQAPQRP
Sbjct: 3 DQPAGHLLQAPQRP 44
Score = 25.8 bits (50), Expect(3) = 6e-060
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2 / +3
Query: 1211 YICCRCIEFKVICTVII 1261
YIC RC+ K C V++
Sbjct: 597 YICVRCLFVKFWCLVVV 647
Score = 25.4 bits (49), Expect(3) = 2e-036
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 439 WNLEHCSSNVDT 404
WNLEH SS+V T
Sbjct: 199 WNLEHYSSSVGT 164
>emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box protein 8 (m8 gene)
Length = 1203
Score = 125 bits (268), Expect(2) = 4e-055
Identities = 50/62 (80%), Positives = 60/62 (96%)
Frame = +1 / +1
Query: 193 EVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEF 372
E+GMGRG+V+LKRIENKINRQVTFSKRRNGLLKKA+E+SVLCDAEVA+I+FS +GKLYE+
Sbjct: 34 EIGMGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEY 213
Query: 373 GS 378
+
Sbjct: 214 AT 219
Score = 110 bits (234), Expect(2) = 4e-055
Identities = 47/112 (41%), Positives = 71/112 (63%)
Frame = +1 / +1
Query: 379 AGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPL 558
+ + K LERY+ Y + ++ +W E KL+AK E +Q+ +HL+GEDL L
Sbjct: 223 SSMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLDSL 402
Query: 559 SVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
++KELQQLE+QLE +L R RK+ +MME + EL++ ER L E N+ L+ +L
Sbjct: 403 NLKELQQLEQQLESSLKHIRSRKSHLMMESISELQKKERSLQEENKALQKEL 558
>gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010B09f, mRNA sequence
Length = 622
Score = 125 bits (267), Expect(2) = 2e-054
Identities = 52/71 (73%), Positives = 63/71 (88%)
Frame = +1 / +3
Query: 166 RASSDLGSEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIF 345
R SS E+GMGRG+V+LKRIENKINRQVTFSKRRNGLL+KA+E+SVLCDAEVA+I+F
Sbjct: 42 RHSSRHLDREIGMGRGKVQLKRIENKINRQVTFSKRRNGLLRKAHEISVLCDAEVAVIVF 221
Query: 346 SGRGKLYEFGS 378
S +GKLYE+ +
Sbjct: 222 SPKGKLYEYAT 254
Score = 108 bits (231), Expect(2) = 2e-054
Identities = 47/112 (41%), Positives = 70/112 (62%)
Frame = +1 / +3
Query: 379 AGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPL 558
+ + K LERY+ Y + ++ +W E KL+AK E +Q+ +HL+GEDL L
Sbjct: 258 SSMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLDSL 437
Query: 559 SVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
++KELQQLE+QLE +L R RK+ +MME + EL++ ER L E N+ L +L
Sbjct: 438 NLKELQQLEQQLESSLKHIRSRKSHLMMESISELQKKERSLQEENQALPKEL 593
>gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0081M10f, mRNA sequence
Length = 750
Score = 121 bits (259), Expect(3) = 5e-053
Identities = 52/74 (70%), Positives = 61/74 (82%)
Frame = +1 / +2
Query: 160 QKRASSDLGSEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALI 339
Q S E MGRG+VELKRI+NKI+RQVTF+KRRNGLLKKAYELSVLCDAEVAL+
Sbjct: 71 QGEGSKQARKEGGRMGRGKVELKRIDNKISRQVTFAKRRNGLLKKAYELSVLCDAEVALL 250
Query: 340 IFSGRGKLYEFGSA 381
IFS RG+L+EF ++
Sbjct: 251 IFSSRGRLFEFSTS 292
Score = 101 bits (216), Expect(3) = 5e-053
Identities = 42/82 (51%), Positives = 61/82 (74%)
Frame = +1 / +2
Query: 472 YQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQV 651
YQE KL+ + E LQ TQR+LLGEDLGPLS+KEL+QLE Q+E +L Q R K+Q ++Q+
Sbjct: 380 YQEFLKLKTRVEFLQTTQRNLLGEDLGPLSMKELEQLENQIEVSLKQIRGAKSQQSLDQL 559
Query: 652 EELRRTERHLGEMNRQLKHKLE 717
EL+R E+ L ++N+ + K++
Sbjct: 560 FELKRREQQLPDVNKDFRKKIQ 625
Score = 24.0 bits (46), Expect(3) = 5e-053
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1 / +2
Query: 376 SAGVTKTLERYQHCCYNAQ 432
S+ + KTLERY+ C N++
Sbjct: 290 SSCMYKTLERYRSCNLNSE 346
>emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box protein 9 (m9 gene)
Length = 1140
Score = 130 bits (278), Expect(3) = 1e-052
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = +1 / +2
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+E MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLY
Sbjct: 143 AEASAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLY 322
Query: 367 EFGS 378
EF S
Sbjct: 323 EFCS 334
Score = 90.4 bits (191), Expect(3) = 1e-052
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1 / +2
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 443 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 622
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E N+ L+ KLE
Sbjct: 623 LQRREQMFSEANKCLRIKLE 682
Score = 86.8 bits (183), Expect(3) = 2e-021
Identities = 38/44 (86%), Positives = 38/44 (86%)
Frame = -1 / -3
Query: 333 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLQLDASPPH 202
RDL VA HGELVGLLEQAV ALGEGDLAVDLVLDPLQL PPH
Sbjct: 289 RDLSVA*HGELVGLLEQAVPALGEGDLAVDLVLDPLQLHPPPPH 158
Score = 36.8 bits (74), Expect(3) = 2e-021
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = -2 / -1
Query: 632 CVFLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCKASNFALSFDIS 477
CV + L C K F + RSSPSK L VRCK S SF S
Sbjct: 597 CVLVVLMCFKDESSCFSRLSSSFMPNESRSSPSKFLCVRCKLSTRVFSFRYS 442
Score = 25.8 bits (50), Expect(3) = 1e-052
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 344 MTKTLDKYQKCSY 382
Score = 23.1 bits (44), Expect(3) = 2e-021
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -1
Query: 875 GYPICRVGSQSIATEW 828
GYP+ RVGS + + W
Sbjct: 840 GYPM*RVGSPAASRGW 793
>gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9-like protein mRNA,
complete cds
Length = 1099
Score = 130 bits (278), Expect(3) = 1e-052
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = +1 / +2
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+E MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLY
Sbjct: 47 AEASAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLY 226
Query: 367 EFGS 378
EF S
Sbjct: 227 EFCS 238
Score = 90.4 bits (191), Expect(3) = 1e-052
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1 / +2
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 347 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 526
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E N+ L+ KLE
Sbjct: 527 LQRREQMFSEANKCLRIKLE 586
Score = 86.8 bits (183), Expect(3) = 2e-021
Identities = 38/44 (86%), Positives = 38/44 (86%)
Frame = -1 / -1
Query: 333 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLQLDASPPH 202
RDL VA HGELVGLLEQAV ALGEGDLAVDLVLDPLQL PPH
Sbjct: 193 RDLSVA*HGELVGLLEQAVPALGEGDLAVDLVLDPLQLHPPPPH 62
Score = 36.8 bits (74), Expect(3) = 2e-021
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = -2 / -2
Query: 632 CVFLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCKASNFALSFDIS 477
CV + L C K F + RSSPSK L VRCK S SF S
Sbjct: 501 CVLVVLMCFKDESSCFSRLSSSFMPNESRSSPSKFLCVRCKLSTRVFSFRYS 346
Score = 25.8 bits (50), Expect(3) = 1e-052
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 248 MTKTLDKYQKCSY 286
Score = 23.1 bits (44), Expect(3) = 2e-021
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 875 GYPICRVGSQSIATEW 828
GYP+ RVGS + + W
Sbjct: 744 GYPM*RVGSPAASRGW 697
>gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024I17f, mRNA sequence
Length = 862
Score = 130 bits (278), Expect(3) = 1e-052
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = +1 / +2
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+E MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLY
Sbjct: 47 AEASAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLY 226
Query: 367 EFGS 378
EF S
Sbjct: 227 EFCS 238
Score = 90.4 bits (191), Expect(3) = 1e-052
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1 / +2
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 347 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 526
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E N+ L+ KLE
Sbjct: 527 LQRREQMFSEANKCLRIKLE 586
Score = 25.8 bits (50), Expect(3) = 1e-052
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 248 MTKTLDKYQKCSY 286
>gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. vulgare cDNA clone HI09J04
5-PRIME, mRNA sequence
Length = 675
Score = 130 bits (278), Expect(3) = 1e-052
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = +1 / +3
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+E MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLY
Sbjct: 69 AEASAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLY 248
Query: 367 EFGS 378
EF S
Sbjct: 249 EFCS 260
Score = 90.4 bits (191), Expect(3) = 1e-052
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1 / +3
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 369 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 548
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E N+ L+ KLE
Sbjct: 549 LQRREQMFSEANKCLRIKLE 608
Score = 86.8 bits (183), Expect(2) = 9e-021
Identities = 38/44 (86%), Positives = 38/44 (86%)
Frame = -1 / -2
Query: 333 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLQLDASPPH 202
RDL VA HGELVGLLEQAV ALGEGDLAVDLVLDPLQL PPH
Sbjct: 215 RDLSVA*HGELVGLLEQAVPALGEGDLAVDLVLDPLQLHPPPPH 84
Score = 36.8 bits (74), Expect(2) = 9e-021
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = -2 / -3
Query: 632 CVFLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCKASNFALSFDIS 477
CV + L C K F + RSSPSK L VRCK S SF S
Sbjct: 523 CVLVVLMCFKDESSCFSRLSSSFMPNESRSSPSKFLCVRCKLSTRVFSFRYS 368
Score = 25.8 bits (50), Expect(3) = 1e-052
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 270 MTKTLDKYQKCSY 308
>gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42C18
5-PRIME, mRNA sequence
Length = 652
Score = 130 bits (278), Expect(3) = 1e-052
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = +1 / +3
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+E MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLY
Sbjct: 57 AEASAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLY 236
Query: 367 EFGS 378
EF S
Sbjct: 237 EFCS 248
Score = 90.4 bits (191), Expect(3) = 1e-052
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1 / +3
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 357 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 536
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E N+ L+ KLE
Sbjct: 537 LQRREQMFSEANKCLRIKLE 596
Score = 86.8 bits (183), Expect(2) = 9e-021
Identities = 38/44 (86%), Positives = 38/44 (86%)
Frame = -1 / -3
Query: 333 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLQLDASPPH 202
RDL VA HGELVGLLEQAV ALGEGDLAVDLVLDPLQL PPH
Sbjct: 203 RDLSVA*HGELVGLLEQAVPALGEGDLAVDLVLDPLQLHPPPPH 72
Score = 36.8 bits (74), Expect(2) = 9e-021
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = -2 / -1
Query: 632 CVFLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCKASNFALSFDIS 477
CV + L C K F + RSSPSK L VRCK S SF S
Sbjct: 511 CVLVVLMCFKDESSCFSRLSSSFMPNESRSSPSKFLCVRCKLSTRVFSFRYS 356
Score = 25.8 bits (50), Expect(3) = 1e-052
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +3
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 258 MTKTLDKYQKCSY 296
>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete
cds
Length = 1153
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 131 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 307
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 323 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 502
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 503 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 646
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1151
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 135 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 311
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 327 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 506
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 507 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 650
>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete
cds
Length = 1145
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 123 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 299
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 315 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 494
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 495 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 638
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1117
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 102 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 278
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 294 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 473
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 474 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 617
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1117
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 102 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 278
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 294 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 473
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 474 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 617
>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 290 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 469
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 470 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 613
>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 290 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 469
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 470 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 613
>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 290 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 469
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 470 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 613
>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 290 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 469
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 470 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 613
>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 290 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 469
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 470 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 613
>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 290 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 469
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 470 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 613
>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box
protein HvBM5A (BM5A) mRNA, complete cds
Length = 1113
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 290 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 469
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 470 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 613
>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein
HvBM5A (BM5A) mRNA, complete cds
Length = 1105
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 90 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 266
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 282 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 461
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 462 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 605
>gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal41e01 5', mRNA sequence
Length = 670
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 110 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 286
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 302 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 481
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 482 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 625
>gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015I07f, mRNA sequence
Length = 631
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 111 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 287
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 303 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 482
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 483 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 626
>gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. vulgare cDNA clone HI08I05
5-PRIME, mRNA sequence
Length = 610
Score = 118 bits (252), Expect(2) = 2e-052
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 91 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 267
Score = 108 bits (230), Expect(2) = 2e-052
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +1
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 283 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 462
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 463 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 606
>gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39e04 5', mRNA sequence
Length = 613
Score = 118 bits (252), Expect(2) = 1e-051
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 110 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 286
Score = 105 bits (225), Expect(2) = 1e-051
Identities = 48/104 (46%), Positives = 66/104 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 302 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 481
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQL 702
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L
Sbjct: 482 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVL 613
>gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33f04 5', mRNA sequence
Length = 603
Score = 118 bits (252), Expect(2) = 1e-051
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 98 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 274
Score = 105 bits (225), Expect(2) = 1e-051
Identities = 48/104 (46%), Positives = 66/104 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 290 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 469
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQL 702
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L
Sbjct: 470 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVL 601
>emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box protein 7 (m7 gene)
Length = 984
Score = 124 bits (265), Expect(2) = 2e-051
Identities = 53/79 (67%), Positives = 65/79 (82%)
Frame = +1 / +2
Query: 145 RPGS*QKRASSDLGSEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDA 324
+P ++R G MGRG+VE++RIENKI+RQVTF+KRRNGLLKKAYELS+LCDA
Sbjct: 11 QPAESRERERKRGGGGRRKMGRGKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDA 190
Query: 325 EVALIIFSGRGKLYEFGSA 381
EVALIIFSGRG+L+EF S+
Sbjct: 191 EVALIIFSGRGRLFEFSSS 247
Score = 99.6 bits (211), Expect(2) = 2e-051
Identities = 41/98 (41%), Positives = 66/98 (67%)
Frame = +1 / +2
Query: 424 NAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECA 603
N+ + E++ YQE KL+ + E LQ +QR++LGEDLGPLS+KEL Q+E Q++ +
Sbjct: 287 NSNSQEATPQVENEINYQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDAS 466
Query: 604 LSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
L R +K QV+++Q+ EL+ E+ L + N+ L+ KL+
Sbjct: 467 LQHIRSKKNQVLLDQLFELKSKEQELQDENKDLRKKLQ 580
>gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30m04 5', mRNA sequence
Length = 630
Score = 118 bits (252), Expect(2) = 2e-051
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 133 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 309
Score = 105 bits (223), Expect(2) = 2e-051
Identities = 47/102 (46%), Positives = 65/102 (63%)
Frame = +1 / +1
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 325 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 504
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNR 696
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+
Sbjct: 505 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENK 630
>gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. vulgare cDNA clone HI13G17
5-PRIME, mRNA sequence
Length = 605
Score = 118 bits (252), Expect(2) = 2e-051
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 103 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 279
Score = 105 bits (223), Expect(2) = 2e-051
Identities = 47/102 (46%), Positives = 65/102 (63%)
Frame = +1 / +1
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 295 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 474
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNR 696
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+
Sbjct: 475 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENK 600
>gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. vulgare cDNA clone HM06P17
5-PRIME, mRNA sequence
Length = 592
Score = 118 bits (252), Expect(2) = 2e-051
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 91 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 267
Score = 105 bits (223), Expect(2) = 2e-051
Identities = 47/102 (46%), Positives = 65/102 (63%)
Frame = +1 / +1
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 283 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 462
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNR 696
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+
Sbjct: 463 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENK 588
>gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N18f, mRNA sequence
Length = 872
Score = 123 bits (263), Expect(2) = 3e-051
Identities = 50/60 (83%), Positives = 59/60 (98%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
MGRG+VE++RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFSGRG+L+EF S+
Sbjct: 6 MGRGKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 185
Score = 99.6 bits (211), Expect(2) = 3e-051
Identities = 41/98 (41%), Positives = 66/98 (67%)
Frame = +1 / +3
Query: 424 NAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECA 603
N+ + E++ YQE KL+ + E LQ +QR++LGEDLGPLS+KEL Q+E Q++ +
Sbjct: 225 NSNSQEATPQVENEINYQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDAS 404
Query: 604 LSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKLE 717
L R +K QV+++Q+ EL+ E+ L + N+ L+ KL+
Sbjct: 405 LQHIRSKKNQVLLDQLFELKSKEQELQDENKDLRKKLQ 518
>gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal32h20 5', mRNA sequence
Length = 605
Score = 118 bits (252), Expect(2) = 4e-051
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +2
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 110 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 286
Score = 104 bits (221), Expect(2) = 4e-051
Identities = 47/101 (46%), Positives = 64/101 (63%)
Frame = +1 / +2
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 302 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 481
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMN 693
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N
Sbjct: 482 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEEN 604
>gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47E18
5-PRIME, mRNA sequence
Length = 610
Score = 116 bits (247), Expect(3) = 6e-051
Identities = 47/57 (82%), Positives = 56/57 (98%)
Frame = +1 / +1
Query: 211 GRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGSA 381
G+VE++RIENKI+RQVTF+KRRNGLLKKAYELS+LCDAEVALIIFSGRG+L+EF S+
Sbjct: 10 GKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 180
Score = 98.2 bits (208), Expect(3) = 6e-051
Identities = 39/82 (47%), Positives = 60/82 (73%)
Frame = +1 / +1
Query: 472 YQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQV 651
YQE KL+ + E LQ +QR++LGEDLGPLS+KEL Q+E Q++ +L R +K QV+++Q+
Sbjct: 313 YQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLQHIRSKKNQVLLDQL 492
Query: 652 EELRRTERHLGEMNRQLKHKLE 717
EL+ E+ L + N+ L+ KL+
Sbjct: 493 FELKSKEQELQDENKDLRKKLQ 558
Score = 26.3 bits (51), Expect(3) = 6e-051
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1 / +1
Query: 376 SAGVTKTLERYQHCCYNAQDSNNSALSE 459
S+ + KTLERY+ C N+Q++ +E
Sbjct: 178 SSCMYKTLERYRTCNSNSQEATPQVENE 261
>gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39I09
5-PRIME, mRNA sequence
Length = 654
Score = 130 bits (278), Expect(3) = 8e-051
Identities = 56/64 (87%), Positives = 59/64 (92%)
Frame = +1 / +2
Query: 187 SEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLY 366
+E MGRGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLY
Sbjct: 134 AEASAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLY 313
Query: 367 EFGS 378
EF S
Sbjct: 314 EFCS 325
Score = 86.8 bits (183), Expect(2) = 9e-021
Identities = 38/44 (86%), Positives = 38/44 (86%)
Frame = -1 / -3
Query: 333 RDLGVAEHGELVGLLEQAVAALGEGDLAVDLVLDPLQLDASPPH 202
RDL VA HGELVGLLEQAV ALGEGDLAVDLVLDPLQL PPH
Sbjct: 280 RDLSVA*HGELVGLLEQAVPALGEGDLAVDLVLDPLQLHPPPPH 149
Score = 84.0 bits (177), Expect(3) = 8e-051
Identities = 36/73 (49%), Positives = 51/73 (69%)
Frame = +1 / +2
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 434 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 613
Query: 658 LRRTERHLGEMNR 696
L+R E+ E N+
Sbjct: 614 LQRREQMFSEANK 652
Score = 36.8 bits (74), Expect(2) = 9e-021
Identities = 21/52 (40%), Positives = 23/52 (44%)
Frame = -2 / -1
Query: 632 CVFLCLACDKAHXXXXXXXXXXFTLSGPRSSPSKCL*VRCKASNFALSFDIS 477
CV + L C K F + RSSPSK L VRCK S SF S
Sbjct: 588 CVLVVLMCFKDESSCFSRLSSSFMPNESRSSPSKFLCVRCKLSTRVFSFRYS 433
Score = 25.8 bits (50), Expect(3) = 8e-051
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 335 MTKTLDKYQKCSY 373
>gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. vulgare cDNA clone HB31I14
5-PRIME, mRNA sequence
Length = 532
Score = 123 bits (264), Expect(3) = 1e-050
Identities = 53/57 (92%), Positives = 55/57 (96%)
Frame = +1 / +2
Query: 208 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
RGRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLYEF S
Sbjct: 8 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 178
Score = 89.5 bits (189), Expect(3) = 1e-050
Identities = 40/80 (50%), Positives = 55/80 (68%)
Frame = +1 / +2
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 287 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 466
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E E N+ L+ KLE
Sbjct: 467 LQRREXMFSEANKCLRIKLE 526
Score = 25.8 bits (50), Expect(3) = 1e-050
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 188 MTKTLDKYQKCSY 226
>gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30j16 5', mRNA sequence
Length = 603
Score = 118 bits (252), Expect(2) = 1e-050
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 111 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 287
Score = 102 bits (217), Expect(2) = 1e-050
Identities = 46/99 (46%), Positives = 63/99 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 303 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 482
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGE 687
LQQLE+QLE +L R RK Q+M E + EL++ ER L E
Sbjct: 483 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQE 599
>gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. vulgare cDNA clone HI15A03
5-PRIME, mRNA sequence
Length = 579
Score = 118 bits (252), Expect(2) = 1e-050
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 90 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 266
Score = 102 bits (217), Expect(2) = 1e-050
Identities = 46/99 (46%), Positives = 63/99 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 282 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 461
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGE 687
LQQLE+QLE +L R RK Q+M E + EL++ ER L E
Sbjct: 462 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQE 578
>gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. vulgare cDNA clone HX11N16
5-PRIME, mRNA sequence
Length = 580
Score = 118 bits (252), Expect(2) = 1e-050
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 91 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 267
Score = 102 bits (217), Expect(2) = 1e-050
Identities = 46/99 (46%), Positives = 63/99 (63%)
Frame = +1 / +1
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 283 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 462
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGE 687
LQQLE+QLE +L R RK Q+M E + EL++ ER L E
Sbjct: 463 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQE 579
>emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box protein 3 (m3 gene)
Length = 1540
Score = 118 bits (253), Expect(2) = 2e-050
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = +1 / +2
Query: 151 GS*QKRASSDLGSEEVGMGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEV 330
G+ ++ + G MGRG V+L+RIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV
Sbjct: 263 GAAERESRRGRGGGRAEMGRGPVQLRRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEV 442
Query: 331 ALIIFSGRGKLYEFGS 378
ALI+FS +GKLYE+ S
Sbjct: 443 ALIVFSTKGKLYEYSS 490
Score = 101 bits (215), Expect(2) = 2e-050
Identities = 44/117 (37%), Positives = 68/117 (58%)
Frame = +1 / +2
Query: 364 YEFGSAGVTKTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGE 543
Y + + LERYQ + + + + + +W E L+ K +ALQ++QR LLGE
Sbjct: 482 YSSQDSSMDVILERYQRYSFEERAVLDPSTGDQANWGDEYGSLKIKLDALQKSQRQLLGE 661
Query: 544 DLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
L PL+ KELQQLE+QL+ +L R RK Q++ E + EL++ E+ L + N L+ L
Sbjct: 662 QLDPLTTKELQQLEQQLDSSLKHIRSRKNQLLFESISELQKKEKSLKDQNGVLQKHL 832
>gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42O13
5-PRIME, mRNA sequence
Length = 655
Score = 121 bits (259), Expect(3) = 4e-050
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 211 GRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
GRVELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLYEF S
Sbjct: 13 GRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 180
Score = 90.4 bits (191), Expect(3) = 4e-050
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1 / +1
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 289 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 468
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E N+ L+ KLE
Sbjct: 469 LQRREQMFSEANKCLRIKLE 528
Score = 25.8 bits (50), Expect(3) = 4e-050
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 190 MTKTLDKYQKCSY 228
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene)
Length = 1196
Score = 109 bits (233), Expect(2) = 1e-049
Identities = 47/59 (79%), Positives = 54/59 (91%)
Frame = +1 / +3
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGR +V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVL DAEV LIIFS +GKLYEF +
Sbjct: 141 MGRRKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLYDAEVGLIIFSTKGKLYEFST 317
Score = 108 bits (230), Expect(2) = 1e-049
Identities = 49/108 (45%), Positives = 69/108 (63%)
Frame = +1 / +3
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 333 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 512
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELRRTERHLGEMNRQLKHKL 714
LQQLE+QLE +L R RK Q+M E + EL++ ER L E N+ L+ +L
Sbjct: 513 LQQLEQQLESSLKHIRARKNQLMHESISELQKKERSLQEENKVLQKEL 656
>gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. vulgare cDNA clone HM07E21
5-PRIME, mRNA sequence
Length = 652
Score = 117 bits (251), Expect(3) = 5e-049
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1 / +1
Query: 208 RGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
R VELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLYEF S
Sbjct: 1 RHEVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 171
Score = 90.4 bits (191), Expect(3) = 5e-049
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1 / +1
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 280 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 459
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E N+ L+ KLE
Sbjct: 460 LQRREQMFSEANKCLRIKLE 519
Score = 25.8 bits (50), Expect(3) = 5e-049
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 181 MTKTLDKYQKCSY 219
>gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_F23 5', mRNA sequence
Length = 579
Score = 116 bits (248), Expect(3) = 1e-048
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = +1 / +1
Query: 217 VELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
VELKRIENKINRQVTF+KRRNGLLKKAYELSVLCDAEVALI+FS RGKLYEF S
Sbjct: 1 VELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 162
Score = 90.4 bits (191), Expect(3) = 1e-048
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = +1 / +1
Query: 478 EMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMMEQVEE 657
E KL+ + + LQRTQR+LLGEDL L +KEL+ LEKQL+ +L R +TQ M++Q+ E
Sbjct: 271 EYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTE 450
Query: 658 LRRTERHLGEMNRQLKHKLE 717
L+R E+ E N+ L+ KLE
Sbjct: 451 LQRREQMFSEANKCLRIKLE 510
Score = 25.8 bits (50), Expect(3) = 1e-048
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1 / +1
Query: 385 VTKTLERYQHCCY 423
+TKTL++YQ C Y
Sbjct: 172 MTKTLDKYQKCSY 210
>gb|BE195618.2|BE195618 HVSMEh0089O24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089O24f, mRNA sequence
Length = 917
Score = 101 bits (216), Expect(4) = 3e-048
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +1 / +1
Query: 463 QSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQVMM 642
QS E KL+A+ E LQRTQR+LLGEDLG L +K+L+QLEKQL+ +L R +TQ M+
Sbjct: 238 QSSRNEYLKLKARVENLQRTQRNLLGEDLGSLGIKDLEQLEKQLDSSLRHIRSTRTQHML 417
Query: 643 EQVEELRRTERHLGEMNRQLKHKLE 717
+Q+ +L+R E+ L E N+ L+ KLE
Sbjct: 418 DQLTDLQRKEQMLSEANKCLRRKLE 492
Score = 100 bits (213), Expect(4) = 3e-048
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +1 / +1
Query: 235 ENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
EN INRQVTF+KRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEF S
Sbjct: 1 EN*INRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 144
Score = 28.6 bits (56), Expect(4) = 3e-048
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1 / +1
Query: 391 KTLERYQHCCYNAQDS 438
KTLERYQ C Y D+
Sbjct: 160 KTLERYQKCSYGGPDT 207
Score = 25.4 bits (49), Expect(4) = 3e-048
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1 / +1
Query: 829 HSVAMDCEPTLQIGYPHHQ 885
H + EPTLQIGY Q
Sbjct: 619 HPLDPTTEPTLQIGYTQEQ 675
>gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5a15 5', mRNA sequence
Length = 639
Score = 118 bits (252), Expect(2) = 3e-048
Identities = 49/59 (83%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 202 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSGRGKLYEFGS 378
MGRG+V+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEV LIIFS +GKLYEF +
Sbjct: 175 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIIFSTKGKLYEFST 351
Score = 94.5 bits (200), Expect(2) = 3e-048
Identities = 42/91 (46%), Positives = 58/91 (63%)
Frame = +1 / +1
Query: 391 KTLERYQHCCYNAQDSNNSALSESQSWYQEMSKLRAKFEALQRTQRHLLGEDLGPLSVKE 570
K LERY+ Y + +S +W E KL+AK E +Q+ Q+HL+GEDL L++KE
Sbjct: 367 KILERYERYSYAEKVLVSSESEIQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKE 546
Query: 571 LQQLEKQLECALSQARQRKTQVMMEQVEELR 663
LQQLE+QLE +L R RK Q+M E + EL+
Sbjct: 547 LQQLEQQLESSLKHIRARKNQLMHESISELQ 639
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 601,463,317
Number of Sequences: 312970
Number of extensions: 10261329
Number of successful extensions: 74105
Number of sequences better than 1.0e-020: 241
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 15337212223
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)