TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= L18925.2.1
(1221 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 375 e-103
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 360 7e-099
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 341 5e-093
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 341 5e-093
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 165 8e-075
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 275 3e-073
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 166 3e-073
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 166 7e-073
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 166 1e-072
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 166 2e-072
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 166 4e-070
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 166 7e-070
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 167 1e-068
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 166 2e-068
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 166 1e-066
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 145 6e-066
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 166 4e-064
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 166 4e-064
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 166 4e-064
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 134 7e-064
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 154 9e-063
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 166 1e-062
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 167 2e-062
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 166 2e-060
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 166 3e-060
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 166 7e-060
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 166 9e-058
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 162 1e-057
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 153 3e-056
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 166 3e-056
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 166 3e-056
gb|BF258470.2|BF258470 HVSMEf0015M23f Hordeum vulgare seedl... 143 5e-056
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 132 3e-053
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 154 2e-052
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 167 1e-051
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 167 1e-051
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 166 6e-049
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 127 1e-046
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 167 3e-046
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 167 3e-046
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 117 1e-043
gb|CK125853.1|CK125853 BES1824111A1d09 BES1824 Hordeum vulg... 166 2e-043
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 166 3e-043
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 118 4e-043
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 167 4e-043
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 116 2e-042
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 118 2e-042
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 167 2e-042
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 113 3e-042
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 112 2e-041
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 109 3e-041
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 109 7e-041
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 109 7e-041
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 109 7e-041
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 109 7e-041
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 109 7e-041
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 109 7e-041
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 109 7e-041
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 109 7e-041
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 109 7e-041
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 109 7e-041
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 109 7e-041
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 109 7e-041
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 109 7e-041
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 109 7e-041
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 167 9e-041
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 109 3e-040
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 109 3e-040
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 109 7e-040
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 109 7e-040
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 163 2e-039
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 163 2e-039
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 109 2e-039
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 109 2e-039
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 109 2e-039
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 109 2e-039
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 109 2e-039
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 109 4e-039
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 109 4e-039
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 160 1e-038
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 111 3e-038
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 100 3e-038
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 109 2e-037
gb|BQ660301.1|BQ660301 HI01N16w HI Hordeum vulgare subsp. v... 132 4e-037
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 109 2e-036
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 109 2e-036
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 109 2e-036
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 109 2e-036
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 109 2e-036
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 109 8e-036
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 109 8e-036
gb|BU981579.1|BU981579 HA24A15r HA Hordeum vulgare subsp. v... 91 1e-035
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 106 3e-035
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 109 6e-035
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 109 8e-035
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 98 3e-034
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 98 3e-034
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 109 7e-034
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 106 7e-034
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 109 3e-033
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 142 3e-033
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 104 2e-032
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 109 6e-032
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 109 1e-031
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 106 2e-031
gb|CA031703.1|CA031703 HX10O06r HX Hordeum vulgare subsp. v... 77 1e-030
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 85 2e-030
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 109 7e-030
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 109 7e-030
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 100 1e-029
gb|BI776462.2|BI776462 EBpi05_SQ001_H07_R pistil, 8 DPA, no... 130 1e-029
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 98 2e-029
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 109 5e-028
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 122 3e-027
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 122 3e-027
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 122 3e-027
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 122 3e-027
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 122 3e-027
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 122 3e-027
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 122 3e-027
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 122 3e-027
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 122 3e-027
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 122 3e-027
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 122 3e-027
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 122 3e-027
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 105 2e-026
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 120 2e-026
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 118 5e-026
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 117 9e-026
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 117 9e-026
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 117 9e-026
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 117 9e-026
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 117 9e-026
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 117 9e-026
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 117 9e-026
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 117 9e-026
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 117 9e-026
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 117 9e-026
gb|BM373901.1|BM373901 EBma03_SQ003_B04_R maternal, 8 DPA, ... 114 1e-024
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 113 2e-024
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 112 3e-024
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 112 4e-024
gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. v... 112 4e-024
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 100 4e-024
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 100 6e-024
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 100 6e-024
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 100 6e-024
gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa... 105 6e-024
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 100 6e-024
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 111 8e-024
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 111 8e-024
gb|BG344343.1|BG344343 HVSMEg0008P19f Hordeum vulgare pre-a... 103 8e-024
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 111 1e-023
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 110 2e-023
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 110 2e-023
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 109 3e-023
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 109 3e-023
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 109 3e-023
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 108 5e-023
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 107 1e-022
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 107 1e-022
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 107 1e-022
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 107 1e-022
gb|CK122890.1|CK122890 BES1824101b13 BES1824 Hordeum vulgar... 106 3e-022
gb|BG301340.1|BG301340 HVSMEb0020P03f Hordeum vulgare seedl... 105 4e-022
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 105 4e-022
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 105 4e-022
gb|BJ543924.1|BJ543924 BJ543924 K. Sato unpublished cDNA li... 74 1e-021
gb|BU968939.1|BU968939 HB10A19r BC Hordeum vulgare subsp. v... 100 2e-021
gb|BQ753907.1|BQ753907 EBca01_SQ002_D17_R carpel, pre-anthe... 103 2e-021
gb|CB882030.1|CB882030 HM11K13w HM Hordeum vulgare subsp. v... 103 2e-021
gb|CA009157.1|CA009157 HU13F11r HU Hordeum vulgare subsp. v... 101 3e-021
gb|CA009054.1|CA009054 HU13A17r HU Hordeum vulgare subsp. v... 101 3e-021
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 102 5e-021
gb|BF629182.3|BF629182 HVSMEb0010D12f Hordeum vulgare seedl... 101 6e-021
gb|BE194950.3|BE194950 HVSMEh0087M04f Hordeum vulgare 5-45 ... 101 6e-021
gb|BQ459169.1|BQ459169 HA02B21r HA Hordeum vulgare subsp. v... 101 6e-021
gb|BM442365.2|BM442365 EBan01_SQ002_P21_R anther, yellow st... 101 6e-021
gb|BU973061.1|BU973061 HB23K04r BC Hordeum vulgare subsp. v... 101 6e-021
gb|BU981281.1|BU981281 HA23C12r HA Hordeum vulgare subsp. v... 101 6e-021
gb|BU994760.1|BU994760 HM08C02r HM Hordeum vulgare subsp. v... 101 6e-021
gb|AY541065.1| Hordeum vulgare subsp. vulgare APETALA3-like... 101 6e-021
>gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. vulgare cDNA clone HA14O21
5-PRIME, mRNA sequence
Length = 633
Score = 375 bits (814), Expect = e-103
Identities = 160/189 (84%), Positives = 178/189 (94%)
Frame = -1 / +2
Query: 1110 ASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 931
A MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+
Sbjct: 65 AEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS 244
Query: 930 NNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSV 751
NNSVKAT+ERYKKAH GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGDSV
Sbjct: 245 NNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSV 424
Query: 750 GNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTLRTKIEEGEQ 571
GNLSLKELKQLESRLEKGI+KIRARK+ELL+ EI+YM KRE ELQ+D++ LRTKI EGEQ
Sbjct: 425 GNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYMVKREIELQSDNIDLRTKIAEGEQ 604
Query: 570 QLQQVTVAR 544
QLQ+VT+AR
Sbjct: 605 QLQKVTIAR 631
Score = 183 bits (395), Expect = 1e-045
Identities = 84/127 (66%), Positives = 92/127 (72%)
Frame = +3 / -2
Query: 558 PAAAVALPPQSWS*GSCGHSEAQSPFWPCN*SPQPAAHSSWP*S*RCLSQGGSPAASAP* 737
P+A A PPQSW * C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASAP*
Sbjct: 617 PSATAAPPPQSWF*DQCCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP* 438
Query: 738 VTGFPRSHQPSAC*CFAASGSGCAVLLILAGRIAGHCALGAGAQRKSQRCVPSCTSQQ*P 917
V G ++HQPSAC*CFAASGSG A L LAG IA H L QR S + VPSCTSQ *P
Sbjct: 437 VIGSQQNHQPSAC*CFAASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSCTSQL*P 258
Query: 918 *HCCWHT 938
*HCCW T
Sbjct: 257 *HCCWST 237
Score = 182 bits (391), Expect(2) = 4e-053
Identities = 84/119 (70%), Positives = 90/119 (75%)
Frame = -3 / +1
Query: 946 PLRVCQQQCQGYC*EVQEGTHRWLFLWAPAPRAQCPAILPARISKTAQPDPDAAKH*QAL 767
PL V QQQCQGY *EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 229 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 408
Query: 766 GW*LRGKPVTQGAEAAGEPP*ERHL*DQGQEE*AAGCGDQLHGQKGD*ASE*PHDPQDQ 590
GW* +P+TQGAEAA +PP ERH DQGQEE*A DQLHGQKGD ASE* H Q+Q
Sbjct: 409 GW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGDRASE*QH*SQNQ 585
Score = 164 bits (352), Expect(2) = 1e-047
Identities = 74/122 (60%), Positives = 85/122 (69%)
Frame = +1 / -3
Query: 745 VSHGVTNQVPVSVLQHLDLVAQFC*FXXXXXXXXXXXXRGPRGRANGVCLLVPLNSSLDT 924
V + +TNQV VSVLQHLDLVA C F R PRG A +CLLVPLN SLDT
Sbjct: 430 VPNRITNQVLVSVLQHLDLVAHLCSFLLVVLLSIDFYERCPRG*ATSMCLLVPLNCSLDT 251
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+L+EA A +DDE HL VA+DGELV LL+EP+ ALAEG L A +L+PLDLNPS H
Sbjct: 250 VVGVLIEAAAAGKDDERHLGVAQDGELVGLLQEPVPALAEGHLAASGILNPLDLNPSPPH 71
Query: 1105 AG 1110
G
Sbjct: 70 LG 65
Score = 164 bits (352), Expect = 1e-039
Identities = 79/144 (54%), Positives = 86/144 (59%)
Frame = -2 / +3
Query: 989 ATLRWPXXXXXXXXXXXSMPTTVSRLLLRGTRRHTPLALPLGPRS*STMPSNSTSKNQQN 810
AT RW S PTTVSRL LRGTRRH +A PLG S* +M SN+TSK Q
Sbjct: 186 ATPRWRSSSFPAAAASMSTPTTVSRLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQR 365
Query: 809 CATRSRCCKTLTGTWLVTPWETCHXXXXXXXXXXXXXXXXXSGPGRVSCWLRRSVTWPKG 630
CATRSRCCKTLT TWLV T H SGPGR+S +L RS TW KG
Sbjct: 366 CATRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKG 545
Query: 629 RLSFRMTT*PSGPRLRRESNSCSR 558
R SFR+TT S PRLRR S+SC R
Sbjct: 546 R*SFRVTTLISEPRLRRGSSSCRR 617
Score = 162 bits (349), Expect = 3e-039
Identities = 73/121 (60%), Positives = 74/121 (61%)
Frame = +2 / -1
Query: 695 MPXXXXXXXXXXXXXDRFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPEE 874
MP DRFPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE
Sbjct: 480 MPFSRRLSSCFSSLSDRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEV 301
Query: 875 EPTVCAFXXXXXXXXXXXXXXXXRRPRLEKTMRATSASQRTESSYAFLRSPLRRLQKVTC 1054
EP CAF RRPRLEKTM ATSAS RTESS AF +SP RRLQKVT
Sbjct: 300 EPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVTW 121
Query: 1055 R 1057
R
Sbjct: 120 R 118
Score = 47.3 bits (97), Expect(2) = 4e-053
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = -3 / +1
Query: 1159 LQVSARTC*RGTSWYRRQHG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
L + + * G + + G KD*DQED E H P G LLQAP+ A +EG+RA
Sbjct: 16 LSIVCSSA*LGLTPRSGRDGEGKD*DQED*EYH*PPGDLLQAPERALEEGLRA 174
Score = 46.9 bits (96), Expect(2) = 1e-047
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +1 / -3
Query: 592 GPEGHVVILKLSLPFGHVTDLRSQQLTLPGPDL 690
G E +VV LKL LPF HV DL +L LPGPDL
Sbjct: 583 GSEINVVTLKLYLPFDHVVDLTR*ELILPGPDL 485
>gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39J06
5-PRIME, mRNA sequence
Length = 607
Score = 360 bits (781), Expect = 7e-099
Identities = 154/182 (84%), Positives = 170/182 (93%)
Frame = -1 / +2
Query: 1110 ASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 931
A MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYEL VLCDAEVALIVFSSRGRLYEY+
Sbjct: 62 AEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELYVLCDAEVALIVFSSRGRLYEYS 241
Query: 930 NNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSV 751
NNSVKAT+ERYKKAH GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGDSV
Sbjct: 242 NNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSV 421
Query: 750 GNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTLRTKIEEGEQ 571
GNLSLKELKQLESRLEKGI+KIRARK+ELL+ EI+YM KRE ELQ+D++ LRTKI EGEQ
Sbjct: 422 GNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYMVKREIELQSDNIDLRTKIAEGEQ 601
Query: 570 QL 565
QL
Sbjct: 602 QL 607
Score = 182 bits (391), Expect(2) = 4e-053
Identities = 84/119 (70%), Positives = 90/119 (75%)
Frame = -3 / +1
Query: 946 PLRVCQQQCQGYC*EVQEGTHRWLFLWAPAPRAQCPAILPARISKTAQPDPDAAKH*QAL 767
PL V QQQCQGY *EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 226 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 405
Query: 766 GW*LRGKPVTQGAEAAGEPP*ERHL*DQGQEE*AAGCGDQLHGQKGD*ASE*PHDPQDQ 590
GW* +P+TQGAEAA +PP ERH DQGQEE*A DQLHGQKGD ASE* H Q+Q
Sbjct: 406 GW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGDRASE*QH*SQNQ 582
Score = 178 bits (383), Expect = 6e-044
Identities = 82/122 (67%), Positives = 89/122 (72%)
Frame = +3 / -3
Query: 573 ALPPQSWS*GSCGHSEAQSPFWPCN*SPQPAAHSSWP*S*RCLSQGGSPAASAP*VTGFP 752
A PPQSW * C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASAP*V G
Sbjct: 599 APPPQSWF*DQCCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP*VIGSQ 420
Query: 753 RSHQPSAC*CFAASGSGCAVLLILAGRIAGHCALGAGAQRKSQRCVPSCTSQQ*P*HCCW 932
++HQPSAC*CFAASGSG A L LAG IA H L QR S + VPSCTSQ *P*HCCW
Sbjct: 419 QNHQPSAC*CFAASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSCTSQL*P*HCCW 240
Query: 933 HT 938
T
Sbjct: 239 ST 234
Score = 160 bits (343), Expect(2) = 2e-046
Identities = 73/122 (59%), Positives = 84/122 (68%)
Frame = +1 / -1
Query: 745 VSHGVTNQVPVSVLQHLDLVAQFC*FXXXXXXXXXXXXRGPRGRANGVCLLVPLNSSLDT 924
V + +TNQV VSVLQHLDLVA C F R PRG A +CLLVPLN SLDT
Sbjct: 427 VPNRITNQVLVSVLQHLDLVAHLCSFLLVVLLSIDFYERCPRG*ATSMCLLVPLNCSLDT 248
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+L+EA A +DDE HL VA+D ELV LL+EP+ ALAEG L A +L+PLDLNPS H
Sbjct: 247 VVGVLIEAAAAGKDDERHLGVAQDVELVGLLQEPVPALAEGHLAASGILNPLDLNPSPPH 68
Query: 1105 AG 1110
G
Sbjct: 67 LG 62
Score = 158 bits (340), Expect = 5e-038
Identities = 72/121 (59%), Positives = 73/121 (60%)
Frame = +2 / -2
Query: 695 MPXXXXXXXXXXXXXDRFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPEE 874
MP DRFPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE
Sbjct: 477 MPFSRRLSSCFSSLSDRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEV 298
Query: 875 EPTVCAFXXXXXXXXXXXXXXXXRRPRLEKTMRATSASQRTESSYAFLRSPLRRLQKVTC 1054
EP CAF RRPRLEKTM ATSAS RT SS AF +SP RRLQKVT
Sbjct: 297 EPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRT*SS*AFFKSPFRRLQKVTW 118
Query: 1055 R 1057
R
Sbjct: 117 R 115
Score = 158 bits (339), Expect = 7e-038
Identities = 77/141 (54%), Positives = 84/141 (59%)
Frame = -2 / +3
Query: 989 ATLRWPXXXXXXXXXXXSMPTTVSRLLLRGTRRHTPLALPLGPRS*STMPSNSTSKNQQN 810
AT RW S PTTVSRL LRGTRRH +A PLG S* +M SN+TSK Q
Sbjct: 183 ATPRWRSSSFPAAAASMSTPTTVSRLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQR 362
Query: 809 CATRSRCCKTLTGTWLVTPWETCHXXXXXXXXXXXXXXXXXSGPGRVSCWLRRSVTWPKG 630
CATRSRCCKTLT TWLV T H SGPGR+S +L RS TW KG
Sbjct: 363 CATRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKG 542
Query: 629 RLSFRMTT*PSGPRLRRESNS 567
R SFR+TT S PRLRR S+S
Sbjct: 543 R*SFRVTTLISEPRLRRGSSS 605
Score = 47.3 bits (97), Expect(2) = 4e-053
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = -3 / +1
Query: 1159 LQVSARTC*RGTSWYRRQHG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
L + + * G + + G KD*DQED E H P G LLQAP+ A +EG+RA
Sbjct: 13 LSIVCSSA*LGLTPRSGRDGEGKD*DQED*EYH*PPGDLLQAPERALEEGLRA 171
Score = 46.9 bits (96), Expect(2) = 2e-046
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +1 / -1
Query: 592 GPEGHVVILKLSLPFGHVTDLRSQQLTLPGPDL 690
G E +VV LKL LPF HV DL +L LPGPDL
Sbjct: 580 GSEINVVTLKLYLPFDHVVDLTR*ELILPGPDL 482
>gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. vulgare cDNA clone HA02K21
5-PRIME, mRNA sequence
Length = 606
Score = 341 bits (739), Expect = 5e-093
Identities = 145/171 (84%), Positives = 161/171 (94%)
Frame = -1 / +1
Query: 1110 ASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 931
A MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+
Sbjct: 94 AEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS 273
Query: 930 NNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSV 751
NNSVKAT+ERYKKAH GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGDSV
Sbjct: 274 NNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSV 453
Query: 750 GNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTL 598
GNLSLKELKQLESRLEKGI+KIRARK+ELL+ EI+YM KRE ELQ+D++ L
Sbjct: 454 GNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYMVKREIELQSDNIDL 606
Score = 179 bits (385), Expect(2) = 2e-052
Identities = 82/114 (71%), Positives = 87/114 (76%)
Frame = -3 / +3
Query: 946 PLRVCQQQCQGYC*EVQEGTHRWLFLWAPAPRAQCPAILPARISKTAQPDPDAAKH*QAL 767
PL V QQQCQGY *EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 258 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 437
Query: 766 GW*LRGKPVTQGAEAAGEPP*ERHL*DQGQEE*AAGCGDQLHGQKGD*ASE*PH 605
GW* +P+TQGAEAA +PP ERH DQGQEE*A DQLHGQKGD ASE* H
Sbjct: 438 GW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGDRASE*QH 599
Score = 164 bits (352), Expect(2) = 5e-047
Identities = 74/122 (60%), Positives = 85/122 (69%)
Frame = +1 / -1
Query: 745 VSHGVTNQVPVSVLQHLDLVAQFC*FXXXXXXXXXXXXRGPRGRANGVCLLVPLNSSLDT 924
V + +TNQV VSVLQHLDLVA C F R PRG A +CLLVPLN SLDT
Sbjct: 459 VPNRITNQVLVSVLQHLDLVAHLCSFLLVVLLSIDFYERCPRG*ATSMCLLVPLNCSLDT 280
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+L+EA A +DDE HL VA+DGELV LL+EP+ ALAEG L A +L+PLDLNPS H
Sbjct: 279 VVGVLIEAAAAGKDDERHLGVAQDGELVGLLQEPVPALAEGHLAASGILNPLDLNPSPPH 100
Query: 1105 AG 1110
G
Sbjct: 99 LG 94
Score = 163 bits (350), Expect = 2e-039
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = +3 / -3
Query: 606 CGHSEAQSPFWPCN*SPQPAAHSSWP*S*RCLSQGGSPAASAP*VTGFPRSHQPSAC*CF 785
C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASAP*V G ++HQPSAC*CF
Sbjct: 598 CCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP*VIGSQQNHQPSAC*CF 419
Query: 786 AASGSGCAVLLILAGRIAGHCALGAGAQRKSQRCVPSCTSQQ*P*HCCWHT 938
AASGSG A L LAG IA H L QR S + VPSCTSQ *P*HCCW T
Sbjct: 418 AASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSCTSQL*P*HCCWST 266
Score = 162 bits (349), Expect = 3e-039
Identities = 73/121 (60%), Positives = 74/121 (61%)
Frame = +2 / -2
Query: 695 MPXXXXXXXXXXXXXDRFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPEE 874
MP DRFPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE
Sbjct: 509 MPFSRRLSSCFSSLSDRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEV 330
Query: 875 EPTVCAFXXXXXXXXXXXXXXXXRRPRLEKTMRATSASQRTESSYAFLRSPLRRLQKVTC 1054
EP CAF RRPRLEKTM ATSAS RTESS AF +SP RRLQKVT
Sbjct: 329 EPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVTW 150
Query: 1055 R 1057
R
Sbjct: 149 R 147
Score = 145 bits (311), Expect = 5e-034
Identities = 69/128 (53%), Positives = 75/128 (58%)
Frame = -2 / +2
Query: 989 ATLRWPXXXXXXXXXXXSMPTTVSRLLLRGTRRHTPLALPLGPRS*STMPSNSTSKNQQN 810
AT RW S PTTVSRL LRGTRRH +A PLG S* +M SN+TSK Q
Sbjct: 215 ATPRWRSSSFPAAAASMSTPTTVSRLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQR 394
Query: 809 CATRSRCCKTLTGTWLVTPWETCHXXXXXXXXXXXXXXXXXSGPGRVSCWLRRSVTWPKG 630
CATRSRCCKTLT TWLV T H SGPGR+S +L RS TW KG
Sbjct: 395 CATRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKG 574
Query: 629 RLSFRMTT 606
R SFR+TT
Sbjct: 575 R*SFRVTT 598
Score = 47.3 bits (97), Expect(2) = 2e-052
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = -3 / +3
Query: 1159 LQVSARTC*RGTSWYRRQHG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
L + + * G + + G KD*DQED E H P G LLQAP+ A +EG+RA
Sbjct: 45 LSIVCSSA*LGLTPRSGRDGEGKD*DQED*EYH*PPGDLLQAPERALEEGLRA 203
Score = 44.6 bits (91), Expect(2) = 5e-047
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / -1
Query: 598 EGHVVILKLSLPFGHVTDLRSQQLTLPGPDL 690
E +VV LKL LPF HV DL +L LPGPDL
Sbjct: 606 EINVVTLKLYLPFDHVVDLTR*ELILPGPDL 514
>gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. vulgare cDNA clone HA16F04
5-PRIME, mRNA sequence
Length = 629
Score = 341 bits (739), Expect = 5e-093
Identities = 145/171 (84%), Positives = 161/171 (94%)
Frame = -1 / +3
Query: 1110 ASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 931
A MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+
Sbjct: 117 AEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS 296
Query: 930 NNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSV 751
NNSVKAT+ERYKKAH GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGDSV
Sbjct: 297 NNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSV 476
Query: 750 GNLSLKELKQLESRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTL 598
GNLSLKELKQLESRLEKGI+KIRARK+ELL+ EI+YM KRE ELQ+D++ L
Sbjct: 477 GNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYMVKREIELQSDNIDL 629
Score = 179 bits (385), Expect(2) = 2e-052
Identities = 82/114 (71%), Positives = 87/114 (76%)
Frame = -3 / +2
Query: 946 PLRVCQQQCQGYC*EVQEGTHRWLFLWAPAPRAQCPAILPARISKTAQPDPDAAKH*QAL 767
PL V QQQCQGY *EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 281 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 460
Query: 766 GW*LRGKPVTQGAEAAGEPP*ERHL*DQGQEE*AAGCGDQLHGQKGD*ASE*PH 605
GW* +P+TQGAEAA +PP ERH DQGQEE*A DQLHGQKGD ASE* H
Sbjct: 461 GW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGDRASE*QH 622
Score = 164 bits (352), Expect(2) = 5e-047
Identities = 74/122 (60%), Positives = 85/122 (69%)
Frame = +1 / -1
Query: 745 VSHGVTNQVPVSVLQHLDLVAQFC*FXXXXXXXXXXXXRGPRGRANGVCLLVPLNSSLDT 924
V + +TNQV VSVLQHLDLVA C F R PRG A +CLLVPLN SLDT
Sbjct: 482 VPNRITNQVLVSVLQHLDLVAHLCSFLLVVLLSIDFYERCPRG*ATSMCLLVPLNCSLDT 303
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+L+EA A +DDE HL VA+DGELV LL+EP+ ALAEG L A +L+PLDLNPS H
Sbjct: 302 VVGVLIEAAAAGKDDERHLGVAQDGELVGLLQEPVPALAEGHLAASGILNPLDLNPSPPH 123
Query: 1105 AG 1110
G
Sbjct: 122 LG 117
Score = 163 bits (350), Expect = 2e-039
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = +3 / -3
Query: 606 CGHSEAQSPFWPCN*SPQPAAHSSWP*S*RCLSQGGSPAASAP*VTGFPRSHQPSAC*CF 785
C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASAP*V G ++HQPSAC*CF
Sbjct: 621 CCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP*VIGSQQNHQPSAC*CF 442
Query: 786 AASGSGCAVLLILAGRIAGHCALGAGAQRKSQRCVPSCTSQQ*P*HCCWHT 938
AASGSG A L LAG IA H L QR S + VPSCTSQ *P*HCCW T
Sbjct: 441 AASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSCTSQL*P*HCCWST 289
Score = 162 bits (349), Expect = 3e-039
Identities = 73/121 (60%), Positives = 74/121 (61%)
Frame = +2 / -2
Query: 695 MPXXXXXXXXXXXXXDRFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPEE 874
MP DRFPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE
Sbjct: 532 MPFSRRLSSCFSSLSDRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEV 353
Query: 875 EPTVCAFXXXXXXXXXXXXXXXXRRPRLEKTMRATSASQRTESSYAFLRSPLRRLQKVTC 1054
EP CAF RRPRLEKTM ATSAS RTESS AF +SP RRLQKVT
Sbjct: 352 EPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVTW 173
Query: 1055 R 1057
R
Sbjct: 172 R 170
Score = 145 bits (311), Expect = 5e-034
Identities = 69/128 (53%), Positives = 75/128 (58%)
Frame = -2 / +1
Query: 989 ATLRWPXXXXXXXXXXXSMPTTVSRLLLRGTRRHTPLALPLGPRS*STMPSNSTSKNQQN 810
AT RW S PTTVSRL LRGTRRH +A PLG S* +M SN+TSK Q
Sbjct: 238 ATPRWRSSSFPAAAASMSTPTTVSRLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQR 417
Query: 809 CATRSRCCKTLTGTWLVTPWETCHXXXXXXXXXXXXXXXXXSGPGRVSCWLRRSVTWPKG 630
CATRSRCCKTLT TWLV T H SGPGR+S +L RS TW KG
Sbjct: 418 CATRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKG 597
Query: 629 RLSFRMTT 606
R SFR+TT
Sbjct: 598 R*SFRVTT 621
Score = 47.3 bits (97), Expect(2) = 2e-052
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = -3 / +2
Query: 1159 LQVSARTC*RGTSWYRRQHG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
L + + * G + + G KD*DQED E H P G LLQAP+ A +EG+RA
Sbjct: 68 LSIVCSSA*LGLTPRSGRDGEGKD*DQED*EYH*PPGDLLQAPERALEEGLRA 226
Score = 44.6 bits (91), Expect(2) = 5e-047
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1 / -1
Query: 598 EGHVVILKLSLPFGHVTDLRSQQLTLPGPDL 690
E +VV LKL LPF HV DL +L LPGPDL
Sbjct: 629 EINVVTLKLYLPFDHVVDLTR*ELILPGPDL 537
>gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2)
mRNA, complete cds
Length = 1068
Score = 165 bits (354), Expect(3) = 8e-075
Identities = 71/97 (73%), Positives = 78/97 (80%)
Frame = -1 / +3
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQ+TFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 39 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQLTFCKRRNGLLKKAYELSVLCDAEV 218
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 219 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 329
Score = 132 bits (283), Expect(3) = 8e-075
Identities = 57/93 (61%), Positives = 73/93 (78%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 351 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 530
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGEQQLQQ 559
AEI YM +RE ELQN++ LR K+ E E+ QQ
Sbjct: 531 AEIEYMQRREMELQNNNFYLREKVAETERGQQQ 629
Score = 107 bits (228), Expect(2) = 5e-028
Identities = 48/72 (66%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEG+LP R V
Sbjct: 305 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGELPVRRV 126
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 125 LDALDLDPPSPH 90
Score = 37.7 bits (76), Expect(2) = 5e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 430 SPIRVLLEFCKVVICCLSFADSCW* 356
Score = 23.1 bits (44), Expect(3) = 8e-075
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3 / +1
Query: 541 SCSSSSCHQLGAEP 500
SCSS+SC L P
Sbjct: 706 SCSSTSCSSLSTTP 747
>gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D24
5-PRIME, mRNA sequence
Length = 490
Score = 275 bits (595), Expect = 3e-073
Identities = 116/131 (88%), Positives = 125/131 (95%)
Frame = -1 / +1
Query: 1110 ASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 931
A MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+
Sbjct: 97 AEMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS 276
Query: 930 NNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSV 751
NNSVKAT+ERYKKAH GS+SG PL+E NAQQ+YQQE+AK+R+QIQMLQNTN+HLVGDSV
Sbjct: 277 NNSVKATIERYKKAHACGSTSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSV 456
Query: 750 GNLSLKELKQL 718
GNLSLKELKQL
Sbjct: 457 GNLSLKELKQL 489
Score = 164 bits (352), Expect = 1e-039
Identities = 74/122 (60%), Positives = 85/122 (69%)
Frame = +1 / -2
Query: 745 VSHGVTNQVPVSVLQHLDLVAQFC*FXXXXXXXXXXXXRGPRGRANGVCLLVPLNSSLDT 924
V + +TNQV VSVLQHLDLVA C F R PRG A +CLLVPLN SLDT
Sbjct: 462 VPNRITNQVLVSVLQHLDLVAHLCSFLLVVLLSIDFYERCPRG*ATSMCLLVPLNCSLDT 283
Query: 925 VVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVLDPLDLNPSSTH 1104
VVG+L+EA A +DDE HL VA+DGELV LL+EP+ ALAEG L A +L+PLDLNPS H
Sbjct: 282 VVGVLIEAAAAGKDDERHLGVAQDGELVGLLQEPVPALAEGHLAASGILNPLDLNPSPPH 103
Query: 1105 AG 1110
G
Sbjct: 102 LG 97
Score = 160 bits (345), Expect = 1e-038
Identities = 71/106 (66%), Positives = 72/106 (67%)
Frame = +2 / -3
Query: 740 DRFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPEEEPTVCAFXXXXXXXX 919
DRFPTESPTKCLLVFCSIWIW R FA SCW* C AL S G PE EP CAF
Sbjct: 467 DRFPTESPTKCLLVFCSIWIWWRIFAVSCW*YC*ALTSMRGAPEVEPQACAFLYLSIVAL 288
Query: 920 XXXXXXXXRRPRLEKTMRATSASQRTESSYAFLRSPLRRLQKVTCR 1057
RRPRLEKTM ATSAS RTESS AF +SP RRLQKVT R
Sbjct: 287 TLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVTWR 150
Score = 125 bits (268), Expect(2) = 2e-036
Identities = 55/76 (72%), Positives = 59/76 (77%)
Frame = -3 / +3
Query: 946 PLRVCQQQCQGYC*EVQEGTHRWLFLWAPAPRAQCPAILPARISKTAQPDPDAAKH*QAL 767
PL V QQQCQGY *EVQEGT WL LW + R+QC AILPAR K A PDPDAAKH*QAL
Sbjct: 261 PL*VLQQQCQGYN*EVQEGTCLWLNLWGTSHRSQCSAILPARNCKDAPPDPDAAKH*QAL 440
Query: 766 GW*LRGKPVTQGAEAA 719
GW* +P+TQGAEAA
Sbjct: 441 GW*FCWEPITQGAEAA 488
Score = 107 bits (229), Expect = 1e-022
Identities = 50/84 (59%), Positives = 53/84 (63%)
Frame = -2 / +2
Query: 989 ATLRWPXXXXXXXXXXXSMPTTVSRLLLRGTRRHTPLALPLGPRS*STMPSNSTSKNQQN 810
AT RW S PTTVSRL LRGTRRH +A PLG S* +M SN+TSK Q
Sbjct: 218 ATPRWRSSSFPAAAASMSTPTTVSRLQLRGTRRHMLVAQPLGHLS*KSMLSNTTSKKLQR 397
Query: 809 CATRSRCCKTLTGTWLVTPWETCH 738
CATRSRCCKTLT TWLV T H
Sbjct: 398 CATRSRCCKTLTSTWLVILLGTYH 469
Score = 107 bits (228), Expect = 1e-022
Identities = 50/73 (68%), Positives = 53/73 (72%)
Frame = +3 / -1
Query: 720 AASAP*VTGFPRSHQPSAC*CFAASGSGCAVLLILAGRIAGHCALGAGAQRKSQRCVPSC 899
AASAP*V G ++HQPSAC*CFAASGSG A L LAG IA H L QR S + VPSC
Sbjct: 487 AASAP*VIGSQQNHQPSAC*CFAASGSGGASLQFLAGSIAEH*LL*EVPQRLSHKHVPSC 308
Query: 900 TSQQ*P*HCCWHT 938
TSQ *P*HCCW T
Sbjct: 307 TSQL*P*HCCWST 269
Score = 47.3 bits (97), Expect(2) = 2e-036
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = -3 / +3
Query: 1159 LQVSARTC*RGTSWYRRQHG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
L + + * G + + G KD*DQED E H P G LLQAP+ A +EG+RA
Sbjct: 48 LSIVCSSA*LGLTPRSGRDGEGKD*DQED*EYH*PPGDLLQAPERALEEGLRA 206
>gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_L21 5', mRNA sequence
Length = 719
Score = 166 bits (357), Expect(2) = 3e-073
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +3
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 63 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 242
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 243 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 353
Score = 129 bits (277), Expect(2) = 3e-073
Identities = 56/93 (60%), Positives = 72/93 (77%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KI ARK+ELL+
Sbjct: 375 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIXARKNELLS 554
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGEQQLQQ 559
AEI YM +RE ELQN++ LR K+ E E+ QQ
Sbjct: 555 AEIEYMQRREMELQNNNFYLREKVAETERGQQQ 653
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 329 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 150
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 149 LDALDLDPPSPH 114
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 454 SPIRVLLEFCKVVICCLSFADSCW* 380
>gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0002P16f, mRNA sequence
Length = 804
Score = 166 bits (357), Expect(2) = 7e-073
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +3
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 81 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 260
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 261 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 371
Score = 128 bits (275), Expect(2) = 7e-073
Identities = 55/93 (59%), Positives = 72/93 (77%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LK LE RL+KG+ KIRARK+ELL+
Sbjct: 393 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKHLEGRLDKGLXKIRARKNELLS 572
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGEQQLQQ 559
AEI YM ++E ELQN++ LR K+ E E+ QQ
Sbjct: 573 AEIEYMQRKEMELQNNNFYLREKVAETERGQQQ 671
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 347 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 168
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 167 LDALDLDPPSPH 132
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 472 SPIRVLLEFCKVVICCLSFADSCW* 398
>gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10J07V 5',
mRNA sequence
Length = 700
Score = 166 bits (357), Expect(2) = 1e-072
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +2
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 86 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 265
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 266 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 376
Score = 127 bits (273), Expect(2) = 1e-072
Identities = 54/86 (62%), Positives = 69/86 (80%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 398 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 577
Query: 657 AEISYMAKRETELQNDHMTLRTKIEE 580
AEI YM +RE ELQN++ LR K+ E
Sbjct: 578 AEIEYMQRREMELQNNNFYLREKVAE 655
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 352 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 173
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 172 LDALDLDPPSPH 137
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 477 SPIRVLLEFCKVVICCLSFADSCW* 403
>gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0095C18f, mRNA sequence
Length = 880
Score = 166 bits (357), Expect(2) = 2e-072
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +3
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 81 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 260
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 261 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 371
Score = 127 bits (272), Expect(2) = 2e-072
Identities = 56/93 (60%), Positives = 71/93 (76%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 393 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 572
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGEQQLQQ 559
AEI YM KRE EL N++ LR K+ E+ QQ
Sbjct: 573 AEIEYMQKREMELANNNFYLREKVS*TERGQQQ 671
Score = 109 bits (232), Expect(3) = 2e-030
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -3
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 347 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 168
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 167 LDALDLDPPSPH 132
Score = 37.7 bits (76), Expect(3) = 2e-030
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 472 SPIRVLLEFCKVVICCLSFADSCW* 398
Score = 24.0 bits (46), Expect(3) = 2e-030
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 595 PEGHVVILKLSLPFGHV 645
P+ VVI KL PF HV
Sbjct: 635 PQVEVVICKLHFPFLHV 585
>gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. vulgare cDNA clone HM13B01
5-PRIME, mRNA sequence
Length = 637
Score = 166 bits (357), Expect(2) = 4e-070
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +2
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 89 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 268
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 269 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 379
Score = 119 bits (255), Expect(2) = 4e-070
Identities = 50/77 (64%), Positives = 64/77 (83%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 401 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 580
Query: 657 AEISYMAKRETELQNDH 607
AEI YM +RE ELQN++
Sbjct: 581 AEIEYMQRREMELQNNN 631
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 355 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 176
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 175 LDALDLDPPSPH 140
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 480 SPIRVLLEFCKVVICCLSFADSCW* 406
>gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011P20f, mRNA sequence
Length = 512
Score = 166 bits (356), Expect(2) = 7e-070
Identities = 70/80 (87%), Positives = 76/80 (95%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NN
Sbjct: 23 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 202
Query: 924 SVKATVERYKKAHTVGSSSG 865
SVKAT+ERYKKA + SS+G
Sbjct: 203 SVKATIERYKKATSDTSSAG 262
Score = 119 bits (254), Expect(2) = 7e-070
Identities = 50/76 (65%), Positives = 63/76 (82%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 284 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLXKIRARKNELLS 463
Query: 657 AEISYMAKRETELQND 610
AEI YM +RE ELQN+
Sbjct: 464 AEIEYMQRREMELQNN 511
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 238 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 59
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 58 LDALDLDPPSPH 23
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 363 SPIRVLLEFCKVVICCLSFADSCW* 289
>gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 1 HvAG1 (AG1)
mRNA, complete cds
Length = 1163
Score = 167 bits (359), Expect(2) = 1e-068
Identities = 70/80 (87%), Positives = 77/80 (96%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NN
Sbjct: 139 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 318
Query: 924 SVKATVERYKKAHTVGSSSG 865
SVKAT+ERYKKA++ S+SG
Sbjct: 319 SVKATIERYKKANSDTSNSG 378
Score = 113 bits (242), Expect(2) = 1e-068
Identities = 51/112 (45%), Positives = 75/112 (66%)
Frame = -1 / +1
Query: 876 SSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 697
+S+ + E NAQ + Q+ S + + + +R LV DSV ++L++LKQLE RLEKG
Sbjct: 364 TSNSGTVAEVNAQYYQQESSKLRQQISSLQNSNSRSLVRDSVSTMTLRDLKQLEGRLEKG 543
Query: 696 ISKIRARKSELLAAEISYMAKRETELQNDHMTLRTKIEEGEQQLQQVTVARS 541
I+KIRARK+EL+ AE+ YM KRE EL ND++ LR+K+ E E+ Q + + S
Sbjct: 544 IAKIRARKNELMYAEVEYMQKREMELHNDNIYLRSKVSENERGQQPMNMMAS 699
Score = 97.7 bits (207), Expect(2) = 2e-022
Identities = 46/73 (63%), Positives = 50/73 (68%)
Frame = +1 / -3
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V L VPLN TVV + VEA A EDDEG L V E ELVRLLEE +AALAEGDLP
Sbjct: 357 VGLFVPLNGGFHTVV*VFVEAPAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 178
Query: 1066 VLDPLDLNPSSTH 1104
VLD LDL+P+ H
Sbjct: 177 VLDALDLDPAPPH 139
Score = 58.8 bits (122), Expect(4) = 3e-021
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = -3 / +3
Query: 1111 RQHG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
R+ G D DQ RE H+PAGHLLQAPQ PQEGVRA
Sbjct: 132 REDGEGPDRDQAHREHHQPAGHLLQAPQRPPQEGVRA 242
Score = 39.1 bits (79), Expect(4) = 3e-021
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTN 775
Q+YQQES+KLR QI LQN+N
Sbjct: 400 QYYQQESSKLRQQISSLQNSN 462
Score = 34.5 bits (69), Expect(4) = 3e-021
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -3 / +3
Query: 949 SPLRVCQQQCQGYC*EVQEGTHRWLFLW 866
+PLR+ +QQC+ + *EVQ+G + LW
Sbjct: 294 APLRILKQQCESHH*EVQKGQQ*HIQLW 377
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -1
Query: 773 LLVFCSIWIWLRSFADSCW* 832
L FC + I RS DSCW*
Sbjct: 464 LFEFCKLLICWRSLEDSCW* 405
Score = 24.4 bits (47), Expect(4) = 3e-021
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = -3 / +3
Query: 736 QGAEAAGEPP*ERHL*DQGQEE*AAGCGDQLHGQKGD*ASE*PHDPQDQ 590
+G+ AA ERH D+ +E*A C ++ ++G+ A+ H P++Q
Sbjct: 504 EGS*AA*RQAGERHSQDKS*KE*ADVC*S*VYAEEGNGAT*R*HLPEEQ 650
>gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N15
5-PRIME, mRNA sequence
Length = 633
Score = 166 bits (357), Expect(2) = 2e-068
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 103 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 282
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 283 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 393
Score = 113 bits (242), Expect(2) = 2e-068
Identities = 48/73 (65%), Positives = 60/73 (82%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 415 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 594
Query: 657 AEISYMAKRETEL 619
AEI YM +RE EL
Sbjct: 595 AEIEYMQRREMEL 633
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 369 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 190
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 189 LDALDLDPPSPH 154
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 494 SPIRVLLEFCKVVICCLSFADSCW* 420
>gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E14T 5',
mRNA sequence
Length = 700
Score = 166 bits (357), Expect(2) = 1e-066
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 58 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 237
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 238 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 348
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 324 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 145
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 144 LDALDLDPPSPH 109
Score = 107 bits (229), Expect(2) = 1e-066
Identities = 45/69 (65%), Positives = 57/69 (82%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 370 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 549
Query: 657 AEISYMAKR 631
AEI YM +R
Sbjct: 550 AEIEYMQRR 576
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 449 SPIRVLLEFCKVVICCLSFADSCW* 375
>gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F02
5-PRIME, mRNA sequence
Length = 501
Score = 145 bits (312), Expect(2) = 6e-066
Identities = 61/72 (84%), Positives = 68/72 (94%)
Frame = -1 / +1
Query: 1080 KRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATVER 901
+RIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNSVKAT+ER
Sbjct: 10 ERIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIER 189
Query: 900 YKKAHTVGSSSG 865
YKKA + SS+G
Sbjct: 190 YKKATSDTSSAG 225
Score = 126 bits (269), Expect(2) = 6e-066
Identities = 53/84 (63%), Positives = 68/84 (80%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 247 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 426
Query: 657 AEISYMAKRETELQNDHMTLRTKI 586
AEI YM +RE ELQN++ LR K+
Sbjct: 427 AEIEYMQRREMELQNNNFYLREKV 498
Score = 96.4 bits (204), Expect(2) = 9e-025
Identities = 44/64 (68%), Positives = 49/64 (76%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 201 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 22
Query: 1069 LDPL 1080
LD L
Sbjct: 21 LDAL 10
Score = 37.7 bits (76), Expect(2) = 9e-025
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 326 SPIRVLLEFCKVVICCLSFADSCW* 252
>gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52J05
5-PRIME, mRNA sequence
Length = 574
Score = 166 bits (357), Expect(2) = 4e-064
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 73 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 252
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 253 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 363
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 339 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 160
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 159 LDALDLDPPSPH 124
Score = 99.6 bits (211), Expect(2) = 4e-064
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 385 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 564
Query: 657 AEI 649
AEI
Sbjct: 565 AEI 573
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 464 SPIRVLLEFCKVVICCLSFADSCW* 390
>gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52B05
5-PRIME, mRNA sequence
Length = 553
Score = 166 bits (357), Expect(2) = 4e-064
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +2
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 53 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 232
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 233 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 343
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 319 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 140
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 139 LDALDLDPPSPH 104
Score = 99.6 bits (211), Expect(2) = 4e-064
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 365 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 544
Query: 657 AEI 649
AEI
Sbjct: 545 AEI 553
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 444 SPIRVLLEFCKVVICCLSFADSCW* 370
>gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52G24
5-PRIME, mRNA sequence
Length = 542
Score = 166 bits (357), Expect(2) = 4e-064
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +2
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 41 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 220
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 221 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 331
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 307 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 128
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 127 LDALDLDPPSPH 92
Score = 99.6 bits (211), Expect(2) = 4e-064
Identities = 42/63 (66%), Positives = 53/63 (84%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 353 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 532
Query: 657 AEI 649
AEI
Sbjct: 533 AEI 541
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 432 SPIRVLLEFCKVVICCLSFADSCW* 358
>gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55C06
5-PRIME, mRNA sequence
Length = 505
Score = 134 bits (287), Expect(2) = 7e-064
Identities = 56/68 (82%), Positives = 63/68 (92%)
Frame = -1 / +1
Query: 1068 NNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATVERYKKA 889
+ +RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNSVKAT+ERYKKA
Sbjct: 4 HEANRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIERYKKA 183
Query: 888 HTVGSSSG 865
+ SS+G
Sbjct: 184 TSDTSSAG 207
Score = 130 bits (279), Expect(2) = 7e-064
Identities = 56/92 (60%), Positives = 72/92 (78%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 229 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 408
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGEQQLQ 562
AEI YM +RE ELQN++ LR K+ E E+ Q
Sbjct: 409 AEIEYMQRREMELQNNNFYLREKVAETERXQQ 504
Score = 92.3 bits (195), Expect(2) = 2e-023
Identities = 41/60 (68%), Positives = 47/60 (78%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R+V
Sbjct: 183 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRLV 4
Score = 37.7 bits (76), Expect(2) = 2e-023
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 308 SPIRVLLEFCKVVICCLSFADSCW* 234
>gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0008A23f, mRNA sequence
Length = 825
Score = 154 bits (331), Expect(2) = 9e-063
Identities = 68/97 (70%), Positives = 75/97 (77%)
Frame = -1 / +2
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRI +RQVTFC+RRNGLLKKAYELSVLCDAEV
Sbjct: 62 KESVSPGLGSAGAAAEKMGRGRIEIKRIGGAGNRQVTFCERRNGLLKKAYELSVLCDAEV 241
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 242 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 352
Score = 106 bits (227), Expect(2) = 9e-063
Identities = 45/70 (64%), Positives = 57/70 (81%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 374 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 553
Query: 657 AEISYMAKRE 628
AEI YM + E
Sbjct: 554 AEIEYMQRGE 583
Score = 100 bits (212), Expect(2) = 8e-026
Identities = 46/72 (63%), Positives = 52/72 (72%)
Frame = +1 / -3
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP
Sbjct: 328 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVPRP 149
Query: 1069 LDPLDLNPSSTH 1104
D LDL+P S H
Sbjct: 148 PDALDLDPPSPH 113
Score = 37.7 bits (76), Expect(2) = 8e-026
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 453 SPIRVLLEFCKVVICCLSFADSCW* 379
>gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0094C05f, mRNA sequence
Length = 916
Score = 166 bits (357), Expect(2) = 1e-062
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 40 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 219
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 220 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 330
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 306 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 127
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 126 LDALDLDPPSPH 91
Score = 94.5 bits (200), Expect(2) = 1e-062
Identities = 40/68 (58%), Positives = 52/68 (76%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++L QLE RL+ G+ KI A K+ELL+
Sbjct: 352 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLXQLEGRLDXGLXKIXAXKNELLS 531
Query: 657 AEISYMAK 634
AEI YM +
Sbjct: 532 AEIEYMQR 555
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 431 SPIRVLLEFCKVVICCLSFADSCW* 357
>gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09P23
5-PRIME, mRNA sequence
Length = 628
Score = 167 bits (359), Expect(2) = 2e-062
Identities = 70/80 (87%), Positives = 77/80 (96%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NN
Sbjct: 145 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 324
Query: 924 SVKATVERYKKAHTVGSSSG 865
SVKAT+ERYKKA++ S+SG
Sbjct: 325 SVKATIERYKKANSDTSNSG 384
Score = 100 bits (212), Expect(2) = 4e-023
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1 / -2
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V L VPLN TVV +LVEA A EDDEG L V E ELVRLLEE +AALAEGDLP
Sbjct: 363 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 184
Query: 1066 VLDPLDLNPSSTH 1104
VLD LDL+P+ H
Sbjct: 183 VLDALDLDPAPPH 145
Score = 93.2 bits (197), Expect(2) = 2e-062
Identities = 42/86 (48%), Positives = 59/86 (68%)
Frame = -1 / +1
Query: 876 SSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 697
+S+ + E NAQ + Q+ S + + + +R LV DSV ++L++LKQLE RLEKG
Sbjct: 370 TSNSGTVAEVNAQYYQQESSKLRQQISSLQNSNSRSLVRDSVSTMTLRDLKQLEGRLEKG 549
Query: 696 ISKIRARKSELLAAEISYMAKRETEL 619
I+KIRARK+EL+ AE+ YM KRE EL
Sbjct: 550 IAKIRARKNELMYAEVEYMQKREMEL 627
Score = 28.6 bits (56), Expect(2) = 4e-023
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -3
Query: 773 LLVFCSIWIWLRSFADSCW* 832
L FC + I RS DSCW*
Sbjct: 470 LFEFCKLLICWRSLEDSCW* 411
>gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB26A20
5-PRIME, mRNA sequence
Length = 554
Score = 166 bits (357), Expect(2) = 2e-060
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +2
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 74 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 253
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 254 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 364
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 340 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 161
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 160 LDALDLDPPSPH 125
Score = 87.2 bits (184), Expect(2) = 2e-060
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKS 670
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+
Sbjct: 386 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKN 553
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 465 SPIRVLLEFCKVVICCLSFADSCW* 391
>gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I23T 5',
mRNA sequence
Length = 700
Score = 166 bits (357), Expect(2) = 3e-060
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +2
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 137 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 316
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 317 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 427
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 403 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 224
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 223 LDALDLDPPSPH 188
Score = 86.8 bits (183), Expect(2) = 3e-060
Identities = 36/55 (65%), Positives = 45/55 (81%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 673
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK
Sbjct: 449 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARK 613
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 528 SPIRVLLEFCKVVICCLSFADSCW* 454
>gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I15V 5',
mRNA sequence
Length = 700
Score = 166 bits (357), Expect(2) = 7e-060
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 85 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 264
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 265 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 375
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 351 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 172
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 171 LDALDLDPPSPH 136
Score = 85.4 bits (180), Expect(2) = 7e-060
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 673
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRA+K
Sbjct: 397 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRAKK 561
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 476 SPIRVLLEFCKVVICCLSFADSCW* 402
>gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06M13V 5',
mRNA sequence
Length = 700
Score = 166 bits (357), Expect(3) = 9e-058
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 157 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 336
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 337 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 447
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 423 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 244
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 243 LDALDLDPPSPH 208
Score = 63.8 bits (133), Expect(3) = 9e-058
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESR 709
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE +
Sbjct: 469 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGK 597
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 548 SPIRVLLEFCKVVICCLSFADSCW* 474
Score = 33.1 bits (66), Expect(3) = 9e-058
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1 / +2
Query: 711 RLEKGISKIRARKSELL 661
RL+KG+ KIRARK+ELL
Sbjct: 596 RLDKGLGKIRARKNELL 646
>gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0010L12f, mRNA sequence
Length = 854
Score = 162 bits (349), Expect(2) = 1e-057
Identities = 70/97 (72%), Positives = 77/97 (79%)
Frame = -1 / +3
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEI R+EN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 87 KESVSPGLGSAGAAAEKMGRGRIEIGRVENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 266
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 267 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 377
Score = 102 bits (218), Expect(2) = 1e-026
Identities = 47/72 (65%), Positives = 53/72 (73%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 353 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 174
Query: 1069 LDPLDLNPSSTH 1104
L DL+P S H
Sbjct: 173 LHAPDLDPPSPH 138
Score = 81.3 bits (171), Expect(2) = 1e-057
Identities = 36/64 (56%), Positives = 49/64 (76%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KI AR++ A
Sbjct: 399 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGL*KIIARENGY*A 578
Query: 657 AEIS 646
++S
Sbjct: 579 LKLS 590
Score = 37.7 bits (76), Expect(2) = 1e-026
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 478 SPIRVLLEFCKVVICCLSFADSCW* 404
>gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007K02f, mRNA sequence
Length = 832
Score = 153 bits (329), Expect(2) = 3e-056
Identities = 65/75 (86%), Positives = 71/75 (94%)
Frame = -1 / +3
Query: 1089 IEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKAT 910
IEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNSVKAT
Sbjct: 3 IEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKAT 182
Query: 909 VERYKKAHTVGSSSG 865
+ERYKKA + SS+G
Sbjct: 183 IERYKKATSDTSSAG 227
Score = 101 bits (215), Expect(2) = 3e-026
Identities = 46/67 (68%), Positives = 52/67 (77%)
Frame = +1 / -3
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 203 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 24
Query: 1069 LDPLDLN 1089
LD LDL+
Sbjct: 23 LDALDLD 3
Score = 85.8 bits (181), Expect(2) = 3e-056
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE +L+ G+ KIRARK E A
Sbjct: 249 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGKLDXGLGKIRARKIEY*A 428
Query: 657 AEIS 646
+S
Sbjct: 429 LNLS 440
Score = 37.7 bits (76), Expect(2) = 3e-026
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 328 SPIRVLLEFCKVVICCLSFADSCW* 254
>gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. vulgare cDNA clone HI01N16
5-PRIME, mRNA sequence
Length = 547
Score = 166 bits (357), Expect(2) = 3e-056
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 94 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 273
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 274 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 384
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 360 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 181
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 180 LDALDLDPPSPH 145
Score = 73.0 bits (153), Expect(2) = 3e-056
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 697
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG
Sbjct: 406 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKG 546
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 485 SPIRVLLEFCKVVICCLSFADSCW* 411
>gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62N08
5-PRIME, mRNA sequence
Length = 546
Score = 166 bits (357), Expect(2) = 3e-056
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 94 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 273
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 274 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 384
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -1
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 360 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 181
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 180 LDALDLDPPSPH 145
Score = 73.0 bits (153), Expect(2) = 3e-056
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 697
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG
Sbjct: 406 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKG 546
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 485 SPIRVLLEFCKVVICCLSFADSCW* 411
>gb|BF258470.2|BF258470 HVSMEf0015M23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0015M23f, mRNA sequence
Length = 891
Score = 143 bits (306), Expect(2) = 5e-056
Identities = 58/72 (80%), Positives = 68/72 (94%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG+IEIKRIEN T+R+VTFC R NGLLKKAYELSVLCDAEVALI FSSRGRLYEY+NN
Sbjct: 198 MGRGKIEIKRIENTTNRKVTFC*RMNGLLKKAYELSVLCDAEVALIDFSSRGRLYEYSNN 377
Query: 924 SVKATVERYKKA 889
++++T++RYKKA
Sbjct: 378 NIRSTIDRYKKA 413
Score = 95.9 bits (203), Expect(2) = 5e-056
Identities = 38/62 (61%), Positives = 55/62 (88%)
Frame = -1 / +3
Query: 834 FYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAA 655
+YQQESAKL QIQMLQN+NRHL+GDS+ +L++KELK ++++LE+GI++IR++K +L A
Sbjct: 462 YYQQESAKLIQQIQMLQNSNRHLMGDSLSSLTVKELKHVDNKLERGITRIRSKKHYMLLA 641
Query: 654 EI 649
EI
Sbjct: 642 EI 647
>gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. vulgare cDNA clone HA17E15
5-PRIME, mRNA sequence
Length = 514
Score = 132 bits (283), Expect(2) = 3e-053
Identities = 57/93 (61%), Positives = 73/93 (78%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+ KIRARK+ELL+
Sbjct: 180 QHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLS 359
Query: 657 AEISYMAKRETELQNDHMTLRTKIEEGEQQLQQ 559
AEI YM +RE ELQN++ LR K+ E E+ QQ
Sbjct: 360 AEIEYMQRREMELQNNNFYLREKVAETERGQQQ 458
Score = 97.3 bits (206), Expect(2) = 3e-053
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = -1 / +3
Query: 1011 AYELSVLCDAEVALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AYELSVLCDAEVAL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 12 AYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 158
>gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0016H10f, mRNA sequence
Length = 471
Score = 154 bits (330), Expect(2) = 2e-052
Identities = 67/97 (69%), Positives = 74/97 (76%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRI+IKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 16 KESVSPGLGSAGAAAEKMGRGRIDIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 195
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNS AT+ERYKK + S+G
Sbjct: 196 ALVVFSSRGRLYEYSNNSG*ATIERYKKGTSDTXSAG 306
Score = 100 bits (214), Expect(2) = 1e-025
Identities = 46/71 (64%), Positives = 53/71 (74%)
Frame = +1 / -1
Query: 892 LLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVL 1071
LLV LN L VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R VL
Sbjct: 279 LLVSLNGCLTAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRVL 100
Query: 1072 DPLDLNPSSTH 1104
D LD++P S H
Sbjct: 99 DALDIDPPSPH 67
Score = 73.0 bits (153), Expect(2) = 2e-052
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGI 694
Q YQQESAKLR QI LQN+NR L+GD++ +S ++LKQLE RL+KG+
Sbjct: 328 QHYQQESAKLRPQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGL 471
Score = 36.3 bits (73), Expect(2) = 1e-025
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -2
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 407 SPIRVLLEFCKVVICGLSFADSCW* 333
>gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D17
5-PRIME, mRNA sequence
Length = 624
Score = 167 bits (359), Expect(2) = 1e-051
Identities = 70/80 (87%), Positives = 77/80 (96%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NN
Sbjct: 209 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 388
Query: 924 SVKATVERYKKAHTVGSSSG 865
SVKAT+ERYKKA++ S+SG
Sbjct: 389 SVKATIERYKKANSDTSNSG 448
Score = 100 bits (212), Expect(2) = 4e-023
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1 / -3
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V L VPLN TVV +LVEA A EDDEG L V E ELVRLLEE +AALAEGDLP
Sbjct: 427 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 248
Query: 1066 VLDPLDLNPSSTH 1104
VLD LDL+P+ H
Sbjct: 247 VLDALDLDPAPPH 209
Score = 57.0 bits (118), Expect(2) = 1e-051
Identities = 26/63 (41%), Positives = 40/63 (63%)
Frame = -1 / +2
Query: 876 SSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKG 697
+S+ + E NAQ + Q+ S + + + +R LV DSV ++L++LKQLE RLEKG
Sbjct: 434 TSNSGTVAEVNAQYYQQESSKLRQQISSLQNSNSRSLVRDSVSTMTLRDLKQLEGRLEKG 613
Query: 696 ISK 688
I+K
Sbjct: 614 IAK 622
Score = 28.6 bits (56), Expect(2) = 4e-023
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -1
Query: 773 LLVFCSIWIWLRSFADSCW* 832
L FC + I RS DSCW*
Sbjct: 534 LFEFCKLLICWRSLEDSCW* 475
>gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11F23
5-PRIME, mRNA sequence
Length = 580
Score = 167 bits (359), Expect(2) = 1e-051
Identities = 70/80 (87%), Positives = 77/80 (96%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NN
Sbjct: 209 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 388
Query: 924 SVKATVERYKKAHTVGSSSG 865
SVKAT+ERYKKA++ S+SG
Sbjct: 389 SVKATIERYKKANSDTSNSG 448
Score = 100 bits (212), Expect(2) = 7e-025
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1 / -1
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V L VPLN TVV +LVEA A EDDEG L V E ELVRLLEE +AALAEGDLP
Sbjct: 427 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 248
Query: 1066 VLDPLDLNPSSTH 1104
VLD LDL+P+ H
Sbjct: 247 VLDALDLDPAPPH 209
Score = 57.0 bits (118), Expect(2) = 1e-051
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKEL 727
Q+YQQES+KLR QI LQN+NR LV DSV ++L++L
Sbjct: 470 QYYQQESSKLRQQISSLQNSNRSLVRDSVSTMTLRDL 580
Score = 34.5 bits (69), Expect(2) = 7e-025
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +2 / -2
Query: 752 TESPTKCLLVFCSIWIWLRSFADSCW* 832
TES T L FC + I RS DSCW*
Sbjct: 555 TESLTSDLFEFCKLLICWRSLEDSCW* 475
>gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60L09
5-PRIME, mRNA sequence
Length = 479
Score = 166 bits (357), Expect(2) = 6e-049
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 82 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 261
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 262 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 372
Score = 109 bits (232), Expect(2) = 1e-028
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -3
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 348 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 169
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 168 LDALDLDPPSPH 133
Score = 48.7 bits (100), Expect(2) = 6e-049
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDS 754
Q YQQESAKLR QI LQN+NR L+GD+
Sbjct: 394 QHYQQESAKLRQQITTLQNSNRTLIGDT 477
Score = 37.7 bits (76), Expect(2) = 1e-028
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -1
Query: 758 SPTKCLLVFCSIWIWLRSFADSCW* 832
SP + LL FC + I SFADSCW*
Sbjct: 473 SPIRVLLEFCKVVICCLSFADSCW* 399
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA,
complete cds
Length = 1464
Score = 127 bits (273), Expect(2) = 1e-046
Identities = 52/70 (74%), Positives = 61/70 (87%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGR+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 387 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSA 566
Query: 924 SVKATVERYK 895
T+ERY+
Sbjct: 567 GTTKTLERYQ 596
Score = 79.9 bits (168), Expect(2) = 1e-046
Identities = 32/85 (37%), Positives = 59/85 (69%)
Frame = -1 / +3
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q + QE +KL+ + + LQ T RHL+G+ +G LS+KEL+QLE +LE +S+ R RK++L+
Sbjct: 645 QSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECSLSQARQRKTQLMM 824
Query: 657 AEISYMAKRETELQNDHMTLRTKIE 583
++ + ++E +L + + L+ K++
Sbjct: 825 EQVEELRRKERQLGDINRQLKHKLD 899
>gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E09T 5',
mRNA sequence
Length = 673
Score = 167 bits (359), Expect(2) = 3e-046
Identities = 70/80 (87%), Positives = 77/80 (96%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NN
Sbjct: 196 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 375
Query: 924 SVKATVERYKKAHTVGSSSG 865
SVKAT+ERYKKA++ S+SG
Sbjct: 376 SVKATIERYKKANSDTSNSG 435
Score = 100 bits (212), Expect(2) = 4e-023
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1 / -2
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V L VPLN TVV +LVEA A EDDEG L V E ELVRLLEE +AALAEGDLP
Sbjct: 414 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 235
Query: 1066 VLDPLDLNPSSTH 1104
VLD LDL+P+ H
Sbjct: 234 VLDALDLDPAPPH 196
Score = 39.1 bits (79), Expect(2) = 3e-046
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQMLQNTN 775
Q+YQQES+KLR QI LQN+N
Sbjct: 457 QYYQQESSKLRQQISSLQNSN 519
Score = 28.6 bits (56), Expect(2) = 4e-023
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -3
Query: 773 LLVFCSIWIWLRSFADSCW* 832
L FC + I RS DSCW*
Sbjct: 521 LFEFCKLLICWRSLEDSCW* 462
>gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11K13
5-PRIME, mRNA sequence
Length = 568
Score = 167 bits (359), Expect(2) = 3e-046
Identities = 70/80 (87%), Positives = 77/80 (96%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NN
Sbjct: 209 MGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNN 388
Query: 924 SVKATVERYKKAHTVGSSSG 865
SVKAT+ERYKKA++ S+SG
Sbjct: 389 SVKATIERYKKANSDTSNSG 448
Score = 100 bits (212), Expect(2) = 4e-023
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1 / -1
Query: 886 VCLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARV 1065
V L VPLN TVV +LVEA A EDDEG L V E ELVRLLEE +AALAEGDLP
Sbjct: 427 VGLFVPLNGGFHTVV*VLVEAAAAGEDDEGDLGVTEHRELVRLLEEAVAALAEGDLPVGG 248
Query: 1066 VLDPLDLNPSSTH 1104
VLD LDL+P+ H
Sbjct: 247 VLDALDLDPAPPH 209
Score = 39.1 bits (79), Expect(2) = 3e-046
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTN 775
Q+YQQES+KLR QI LQN+N
Sbjct: 470 QYYQQESSKLRQQISSLQNSN 532
Score = 28.6 bits (56), Expect(2) = 4e-023
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / -2
Query: 773 LLVFCSIWIWLRSFADSCW* 832
L FC + I RS DSCW*
Sbjct: 534 LFEFCKLLICWRSLEDSCW* 475
>gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O149 5-PRIME, mRNA sequence
Length = 778
Score = 117 bits (251), Expect(2) = 1e-043
Identities = 48/66 (72%), Positives = 57/66 (86%)
Frame = -1 / +2
Query: 1092 RIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKA 913
R+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEVALI+FSSRG+LYE+ +
Sbjct: 2 RVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGTTK 181
Query: 912 TVERYK 895
T+ERY+
Sbjct: 182 TLERYQ 199
Score = 79.9 bits (168), Expect(2) = 1e-043
Identities = 32/85 (37%), Positives = 59/85 (69%)
Frame = -1 / +2
Query: 837 QFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLA 658
Q + QE +KL+ + + LQ T RHL+G+ +G LS+KEL+QLE +LE +S+ R RK++L+
Sbjct: 248 QSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECSLSQARQRKTQLMM 427
Query: 657 AEISYMAKRETELQNDHMTLRTKIE 583
++ + ++E +L + + L+ K++
Sbjct: 428 EQVEELRRKERQLGDINRQLKHKLD 502
>gb|CK125853.1|CK125853 BES1824111A1d09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D0911 5-PRIME, mRNA sequence
Length = 377
Score = 166 bits (356), Expect(2) = 2e-043
Identities = 72/92 (78%), Positives = 83/92 (90%)
Frame = -1 / +1
Query: 819 SAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEISYM 640
S +QIQMLQNTN+HLVGDSVGNLSLKELKQLESRLEKGI+KIRARK+ELL+ EI+YM
Sbjct: 1 STHASDQIQMLQNTNKHLVGDSVGNLSLKELKQLESRLEKGIAKIRARKNELLSCEINYM 180
Query: 639 AKRETELQNDHMTLRTKIEEGEQQLQQVTVAR 544
KRE ELQ+D++ LRTKI EGEQQLQ+VT+AR
Sbjct: 181 VKREIELQSDNIDLRTKIAEGEQQLQKVTIAR 276
Score = 131 bits (280), Expect(2) = 3e-033
Identities = 57/82 (69%), Positives = 64/82 (78%)
Frame = +3 / -2
Query: 558 PAAAVALPPQSWS*GSCGHSEAQSPFWPCN*SPQPAAHSSWP*S*RCLSQGGSPAASAP* 737
P+A A PPQSW * C HSEA SPF PC+*S + AHSSWP*S +CLS+GG AASAP*
Sbjct: 262 PSATAAPPPQSWF*DQCCHSEALSPF*PCS*SHKIGAHSSWP*SLQCLSRGGFRAASAP* 83
Query: 738 VTGFPRSHQPSAC*CFAASGSG 803
V G ++HQPSAC*CFAASGSG
Sbjct: 82 VIGSQQNHQPSAC*CFAASGSG 17
Score = 113 bits (242), Expect(2) = 4e-027
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = -3 / +3
Query: 805 QPDPDAAKH*QALGW*LRGKPVTQGAEAAGEPP*ERHL*DQGQEE*AAGCGDQLHGQKGD 626
+PDPDAAKH*QALGW* +P+TQGAEAA +PP ERH DQGQEE*A DQLHGQKGD
Sbjct: 15 RPDPDAAKH*QALGW*FCWEPITQGAEAARKPPRERHCKDQGQEE*APIL*DQLHGQKGD 194
Query: 625 *ASE*PHDPQDQ 590
ASE* H Q+Q
Sbjct: 195 RASE*QH*SQNQ 230
Score = 97.3 bits (206), Expect(2) = 9e-022
Identities = 45/82 (54%), Positives = 49/82 (59%)
Frame = -2 / +2
Query: 803 TRSRCCKTLTGTWLVTPWETCHXXXXXXXXXXXXXXXXXSGPGRVSCWLRRSVTWPKGRL 624
TRSRCCKTLT TWLV T H SGPGR+S +L RS TW KGR
Sbjct: 17 TRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVRSTTWSKGR* 196
Query: 623 SFRMTT*PSGPRLRRESNSCSR 558
SFR+TT S PRLRR S+SC R
Sbjct: 197 SFRVTTLISEPRLRRGSSSCRR 262
Score = 31.3 bits (62), Expect(2) = 3e-033
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2 / -1
Query: 392 CCASSICCKLPGRKHFMSSVAKG 460
C ++ +L G+KHFMSS KG
Sbjct: 368 CACTAASKRLAGKKHFMSSAVKG 300
Score = 30.9 bits (61), Expect(2) = 2e-043
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1 / +1
Query: 510 ELNPFLEMDTKCFFTGGPF 454
ELNPF +D KCFF F
Sbjct: 292 ELNPFTALDMKCFFPANLF 348
Score = 30.4 bits (60), Expect(2) = 4e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / +1
Query: 459 PFATLDMKCFLPGSL 415
PF LDMKCF P +L
Sbjct: 301 PFTALDMKCFFPANL 345
Score = 26.7 bits (52), Expect(2) = 9e-022
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3 / +3
Query: 511 GAEPILGDGYQMLLHWRPLRDAG 443
GAEP G+++LL +PLR G
Sbjct: 291 GAEPFHRAGHEVLLPCQPLRGGG 359
>gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. vulgare cDNA clone HB11E16
5-PRIME, mRNA sequence
Length = 463
Score = 166 bits (357), Expect(2) = 3e-043
Identities = 72/97 (74%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 1155 KSLQEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEV 976
K P MGRGRIEIKRIEN T+RQVTFCKRRNGLLKKAYELSVLCDAEV
Sbjct: 100 KESVSPGLGSAGAAAEKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV 279
Query: 975 ALIVFSSRGRLYEYANNSVKATVERYKKAHTVGSSSG 865
AL+VFSSRGRLYEY+NNSVKAT+ERYKKA + SS+G
Sbjct: 280 ALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSAG 390
Score = 109 bits (232), Expect(2) = 2e-024
Identities = 49/72 (68%), Positives = 55/72 (76%)
Frame = +1 / -2
Query: 889 CLLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVV 1068
CLLV LN LD VVG+L+EA A +DDE LSVAE ELVRLL+E +AALAEGDLP R V
Sbjct: 366 CLLVSLNGCLDAVVGVLIEAPAAGKDDERDLSVAEHRELVRLLQESVAALAEGDLPVRRV 187
Query: 1069 LDPLDLNPSSTH 1104
LD LDL+P S H
Sbjct: 186 LDALDLDPPSPH 151
Score = 29.9 bits (59), Expect(2) = 3e-043
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / +1
Query: 837 QFYQQESAKLRNQIQML 787
Q YQQESAKLR QI L
Sbjct: 412 QHYQQESAKLRQQITTL 462
Score = 23.5 bits (45), Expect(2) = 2e-024
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -3
Query: 809 SFADSCW* 832
SFADSCW*
Sbjct: 440 SFADSCW* 417
>emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box protein 7 (m7 gene)
Length = 984
Score = 118 bits (253), Expect(2) = 4e-043
Identities = 49/75 (65%), Positives = 62/75 (82%)
Frame = -1 / +2
Query: 1146 QEPAREEQAGIVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALI 967
+E R+ G MGRG++E++RIEN SRQVTF KRRNGLLKKAYELS+LCDAEVALI
Sbjct: 26 RERERKRGGGGRRKMGRGKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALI 205
Query: 966 VFSSRGRLYEYANNS 922
+FS RGRL+E++++S
Sbjct: 206 IFSGRGRLFEFSSSS 250
Score = 77.1 bits (162), Expect(2) = 4e-043
Identities = 27/82 (32%), Positives = 60/82 (73%)
Frame = -1 / +2
Query: 825 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIS 646
QE KL+ +++ LQ++ R+++G+ +G LS+KEL Q+E++++ + IR++K+++L ++
Sbjct: 338 QEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLQHIRSKKNQVLLDQLF 517
Query: 645 YMAKRETELQNDHMTLRTKIEE 580
+ +E ELQ+++ LR K+++
Sbjct: 518 ELKSKEQELQDENKDLRKKLQD 583
>gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0005M04f, mRNA sequence
Length = 892
Score = 167 bits (360), Expect = 9e-041
Identities = 69/100 (69%), Positives = 84/100 (84%)
Frame = -1 / +2
Query: 1116 IVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 937
++A+MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLC+AE+ALIVFS+RGRLYE
Sbjct: 92 LLATMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYE 271
Query: 936 YANNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQES 817
YA+NS + T++RYKKA S S P + ++ Q F Q+ +
Sbjct: 272 YASNSTRTTIDRYKKASASSSGSAPAIDVNSQQYFQQESA 391
Score = 149 bits (319), Expect(2) = 4e-043
Identities = 62/108 (57%), Positives = 83/108 (76%)
Frame = -1 / +2
Query: 894 KAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLE 715
K + SS P ++ N+QQ++QQESAKLR QI LQN NRHL+GDSVGNL++KELK LE
Sbjct: 311 KKASASSSGSAPAIDVNSQQYFQQESAKLRQQILSLQNANRHLMGDSVGNLTVKELKTLE 490
Query: 714 SRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTLRTKIEEGEQ 571
+RL+K I +IR++K ELL+AEI YM K E +LQN++M LR K+ + E+
Sbjct: 491 NRLDKSIGRIRSKKHELLSAEIEYMQKLEADLQNENMYLRAKVADAER 634
Score = 93.6 bits (198), Expect(3) = 4e-033
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = +1 / -1
Query: 892 LLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVL 1071
LLVP++ V ILVEA EDD+G L AEDGELV LLE+P+ ALAEG L AR VL
Sbjct: 316 LLVPVDRRPRAVTSILVEAAAGGEDDQGDLRFAEDGELVGLLEQPVPALAEGHLAARRVL 137
Query: 1072 DPLDLNPSSTH 1104
DPLDL+P H
Sbjct: 136 DPLDLDPPPPH 104
Score = 54.2 bits (112), Expect(3) = 4e-033
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = +2 / -2
Query: 743 RFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPEEE 877
+ PTESP KCLL FC I RSFADSC C L S +G EE
Sbjct: 462 KLPTESPIKCLLAFCRDSICWRSFADSC*KYC*ELTSMAGAEPEE 328
Score = 46.9 bits (96), Expect(2) = 4e-043
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = -3 / +1
Query: 1105 HG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
HG +D DQEDRE EP LLQA + A QEG+RA
Sbjct: 103 HGEGEDRDQEDREHDEPPSDLLQAQERAAQEGLRA 207
Score = 32.2 bits (64), Expect(3) = 4e-033
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / -1
Query: 592 GPEGHVVILKLSLPFGHVTDLRSQQLTL 675
G + HV++L++SL HV DL QQL L
Sbjct: 613 GSKIHVLVLQISLQLLHVFDLGGQQLVL 530
>gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N18f, mRNA sequence
Length = 872
Score = 116 bits (248), Expect(2) = 2e-042
Identities = 46/61 (75%), Positives = 57/61 (93%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG++E++RIEN SRQVTF KRRNGLLKKAYELS+LCDAEVALI+FS RGRL+E++++
Sbjct: 6 MGRGKVEMRRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 185
Query: 924 S 922
S
Sbjct: 186 S 188
Score = 77.1 bits (162), Expect(2) = 2e-042
Identities = 27/82 (32%), Positives = 60/82 (73%)
Frame = -1 / +3
Query: 825 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIS 646
QE KL+ +++ LQ++ R+++G+ +G LS+KEL Q+E++++ + IR++K+++L ++
Sbjct: 276 QEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLQHIRSKKNQVLLDQLF 455
Query: 645 YMAKRETELQNDHMTLRTKIEE 580
+ +E ELQ+++ LR K+++
Sbjct: 456 ELKSKEQELQDENKDLRKKLQD 521
>gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0081M10f, mRNA sequence
Length = 750
Score = 118 bits (253), Expect(2) = 2e-042
Identities = 47/61 (77%), Positives = 57/61 (93%)
Frame = -1 / +2
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG++E+KRI+N SRQVTF KRRNGLLKKAYELSVLCDAEVAL++FSSRGRL+E++ +
Sbjct: 113 MGRGKVELKRIDNKISRQVTFAKRRNGLLKKAYELSVLCDAEVALLIFSSRGRLFEFSTS 292
Query: 924 S 922
S
Sbjct: 293 S 295
Score = 74.8 bits (157), Expect(2) = 2e-042
Identities = 31/82 (37%), Positives = 55/82 (67%)
Frame = -1 / +2
Query: 825 QESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARKSELLAAEIS 646
QE KL+ +++ LQ T R+L+G+ +G LS+KEL+QLE+++E + +IR KS+ ++
Sbjct: 383 QEFLKLKTRVEFLQTTQRNLLGEDLGPLSMKELEQLENQIEVSLKQIRGAKSQQSLDQLF 562
Query: 645 YMAKRETELQNDHMTLRTKIEE 580
+ +RE +L + + R KI+E
Sbjct: 563 ELKRREQQLPDVNKDFRKKIQE 628
>gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0089L24f, mRNA sequence
Length = 786
Score = 167 bits (360), Expect = 9e-041
Identities = 69/100 (69%), Positives = 84/100 (84%)
Frame = -1 / +2
Query: 1116 IVASMGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYE 937
++A+MGRGRIEIKRIEN TSRQVTFCKRRNGLLKKAYELSVLC+AE+ALIVFS+RGRLYE
Sbjct: 92 LLATMGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYE 271
Query: 936 YANNSVKATVERYKKAHTVGSSSGPPLLEHNAQQFYQQES 817
YA+NS + T++RYKKA S S P + ++ Q F Q+ +
Sbjct: 272 YASNSTRTTIDRYKKASASSSGSAPAIDVNSQQYFQQESA 391
Score = 146 bits (313), Expect(2) = 2e-042
Identities = 61/108 (56%), Positives = 83/108 (76%)
Frame = -1 / +2
Query: 894 KAHTVGSSSGPPLLEHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLE 715
K + SS P ++ N+QQ++QQESAKLR QI LQN NRHL+GDSVGNL++KELK LE
Sbjct: 311 KKASASSSGSAPAIDVNSQQYFQQESAKLRQQILSLQNANRHLMGDSVGNLTVKELKTLE 490
Query: 714 SRLEKGISKIRARKSELLAAEISYMAKRETELQNDHMTLRTKIEEGEQ 571
+RL+K I +IR++K ELL+AEI YM K E +LQN++M L T++ + E+
Sbjct: 491 NRLDKSIGRIRSKKHELLSAEIEYMQKLEADLQNENMFLLTQVADAER 634
Score = 93.6 bits (198), Expect(3) = 6e-033
Identities = 43/71 (60%), Positives = 49/71 (69%)
Frame = +1 / -3
Query: 892 LLVPLNSSLDTVVGILVEATTAREDDEGHLSVAEDGELVRLLEEPIAALAEGDLPARVVL 1071
LLVP++ V ILVEA EDD+G L AEDGELV LLE+P+ ALAEG L AR VL
Sbjct: 316 LLVPVDRRPRAVTSILVEAAAGGEDDQGDLRFAEDGELVGLLEQPVPALAEGHLAARRVL 137
Query: 1072 DPLDLNPSSTH 1104
DPLDL+P H
Sbjct: 136 DPLDLDPPPPH 104
Score = 54.2 bits (112), Expect(3) = 6e-033
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = +2 / -1
Query: 743 RFPTESPTKCLLVFCSIWIWLRSFADSCW*NCWALCSRSGGPEEE 877
+ PTESP KCLL FC I RSFADSC C L S +G EE
Sbjct: 462 KLPTESPIKCLLAFCRDSICWRSFADSC*KYC*ELTSMAGAEPEE 328
Score = 46.9 bits (96), Expect(2) = 2e-042
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = -3 / +1
Query: 1105 HG*RKD*DQEDREQHEPAGHLLQAPQWAPQEGVRA 1001
HG +D DQEDRE EP LLQA + A QEG+RA
Sbjct: 103 HGEGEDRDQEDREHDEPPSDLLQAQERAAQEGLRA 207
Score = 31.8 bits (63), Expect(3) = 6e-033
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1 / -3
Query: 592 GPEGHVVILKLSLPFGHVTDLRSQQLTL 675
G + HV++L++SL HV DL QQL L
Sbjct: 613 G*KKHVLVLQISLQLLHVFDLGGQQLVL 530
>emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box protein 8 (m8 gene)
Length = 1203
Score = 113 bits (242), Expect(2) = 3e-042
Identities = 45/61 (73%), Positives = 56/61 (91%)
Frame = -1 / +1
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG++++KRIEN +RQVTF KRRNGLLKKA+E+SVLCDAEVA+IVFS +G+LYEYA +
Sbjct: 43 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYATD 222
Query: 924 S 922
S
Sbjct: 223 S 225
Score = 79.0 bits (166), Expect(2) = 3e-042
Identities = 33/94 (35%), Positives = 61/94 (64%)
Frame = -1 / +1
Query: 852 EHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 673
E ++ + E KL+ +I+ +Q ++HL+G+ + +L+LKEL+QLE +LE + IR+RK
Sbjct: 292 ESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLDSLNLKELQQLEQQLESSLKHIRSRK 471
Query: 672 SELLAAEISYMAKRETELQNDHMTLRTKIEEGEQ 571
S L+ IS + K+E LQ ++ L+ ++ E ++
Sbjct: 472 SHLMMESISELQKKERSLQEENKALQKELVERQK 573
>gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0010B09f,
mRNA sequence
Length = 622
Score = 112 bits (239), Expect(2) = 2e-041
Identities = 44/61 (72%), Positives = 56/61 (91%)
Frame = -1 / +3
Query: 1104 MGRGRIEIKRIENNTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 925
MGRG++++KRIEN +RQVTF KRRNGLL+KA+E+SVLCDAEVA+IVFS +G+LYEYA +
Sbjct: 78 MGRGKVQLKRIENKINRQVTFSKRRNGLLRKAHEISVLCDAEVAVIVFSPKGKLYEYATD 257
Query: 924 S 922
S
Sbjct: 258 S 260
Score = 78.0 bits (164), Expect(2) = 2e-041
Identities = 33/94 (35%), Positives = 60/94 (63%)
Frame = -1 / +3
Query: 852 EHNAQQFYQQESAKLRNQIQMLQNTNRHLVGDSVGNLSLKELKQLESRLEKGISKIRARK 673
E ++ + E KL+ +I+ +Q ++HL+G+ + +L+LKEL+QLE +LE + IR+RK
Sbjct: 327 ESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLDSLNLKELQQLEQQLESSLKHIRSRK 506
Query: 672 SELLAAEISYMAKRETELQNDHMTLRTKIEEGEQ 571
S L+ IS + K+E LQ ++ L ++ E ++
Sbjct: 507 SHLMMESISELQKKERSLQEENQALPKELVERQK 608
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 589,998,853
Number of Sequences: 312970
Number of extensions: 11116328
Number of successful extensions: 87390
Number of sequences better than 1.0e-020: 218
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14752141457
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)