TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= CCR2
(1466 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, dro... 296 e-103
gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots... 330 8e-090
gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DA... 282 4e-075
gb|AL503986.1|AL503986 AL503986 Hordeum vulgare Barke roots... 251 3e-071
gb|BM375203.2|BM375203 EBem06_SQ002_K13_R embryo, 21 DPA, n... 121 2e-067
gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. v... 238 4e-062
gb|BG310404.1|BG310404 HVSMEc0018H08f Hordeum vulgare seedl... 234 1e-060
gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hyd... 173 9e-060
gb|BI958620.1|BI958620 HVSMEn0015P02f Hordeum vulgare rachi... 169 1e-057
gb|BI950770.1|BI950770 HVSMEl0023C06f Hordeum vulgare spike... 205 2e-055
gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachi... 163 4e-053
gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hyd... 100 7e-052
gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedl... 174 2e-049
gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedl... 169 7e-048
gb|AV925423.1|AV925423 AV925423 K. Sato unpublished cDNA li... 189 4e-047
gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachi... 174 5e-047
gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-a... 174 6e-047
gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachi... 174 6e-047
gb|CA021049.1|CA021049 HZ38P08r HZ Hordeum vulgare subsp. v... 184 1e-045
gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachi... 165 2e-044
gb|BI956546.1|BI956546 HVSMEn0004B08f Hordeum vulgare rachi... 96 4e-044
gb|BQ763205.1|BQ763205 EBro02_SQ007_F14_R root, 3 week, hyd... 149 1e-043
gb|BI958862.1|BI958862 HVSMEn0016O20f Hordeum vulgare rachi... 174 9e-043
gb|BJ450530.1|BJ450530 BJ450530 K. Sato unpublished cDNA li... 161 5e-042
gb|BI957284.1|BI957284 HVSMEn0008K05f Hordeum vulgare rachi... 171 8e-042
gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA li... 101 1e-041
gb|BU975402.1|BU975402 HB31A09r BC Hordeum vulgare subsp. v... 89 2e-041
gb|BU975696.1|BU975696 HB32A09r BC Hordeum vulgare subsp. v... 89 2e-041
gb|BF263684.3|BF263684 HV_CEa0007G07f Hordeum vulgare seedl... 165 5e-040
gb|BI957975.1|BI957975 HVSMEn0012L23f Hordeum vulgare rachi... 165 7e-040
gb|BI959591.1|BI959591 HVSMEn0020F03f Hordeum vulgare rachi... 165 7e-040
gb|BQ467661.1|BQ467661 HS04H17r HS Hordeum vulgare subsp. v... 124 2e-039
gb|BE230902.1|BE230902 HVSMEg0001E18f Hordeum vulgare pre-a... 84 2e-039
gb|BI958460.1|BI958460 HVSMEn0015C07f Hordeum vulgare rachi... 125 1e-038
gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. v... 73 1e-038
gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA li... 79 2e-038
gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, dro... 86 5e-038
gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedl... 79 1e-037
gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA li... 79 1e-037
gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA li... 79 1e-037
gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke devel... 79 1e-037
gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare su... 80 3e-037
gb|BM444997.2|BM444997 EBem09_SQ007_C03_R embryo, 1 Day ger... 124 3e-037
gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DA... 80 4e-036
gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. v... 71 6e-036
gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. v... 72 1e-035
gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 ... 69 3e-035
gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 ... 82 4e-035
gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hyd... 86 4e-035
gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedl... 101 2e-034
gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedl... 101 2e-034
gb|BI948507.1|BI948507 HVSMEl0009O08f Hordeum vulgare spike... 105 3e-034
gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachi... 130 3e-034
gb|BF254781.2|BF254781 HVSMEf0005A11f Hordeum vulgare seedl... 131 8e-034
gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA li... 69 2e-033
gb|CA015399.1|CA015399 HT14D04r HT Hordeum vulgare subsp. v... 116 2e-033
gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA li... 79 3e-033
gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-a... 88 1e-032
gb|AV930574.1|AV930574 AV930574 K. Sato unpublished cDNA li... 136 3e-032
gb|AV929667.1|AV929667 AV929667 K. Sato unpublished cDNA li... 136 3e-032
gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA li... 73 2e-031
gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA li... 88 2e-031
gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. v... 114 2e-031
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 79 8e-031
gb|BM442873.2|BM442873 EBro02_SQ001_K13_R root, 3 week, hyd... 86 1e-030
gb|AV931426.1|AV931426 AV931426 K. Sato unpublished cDNA li... 129 4e-030
gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. v... 99 4e-030
gb|BQ464700.1|BQ464700 HU01A05T HU Hordeum vulgare subsp. v... 116 6e-030
gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. v... 67 6e-030
gb|BG344412.1|BG344412 HVSMEg0009D04f Hordeum vulgare pre-a... 111 2e-029
gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedl... 80 5e-029
gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. v... 80 8e-029
gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. v... 80 8e-029
gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. v... 80 9e-029
gb|CA001150.1|CA001150 HS05E05u HS Hordeum vulgare subsp. v... 116 9e-029
gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA li... 70 3e-028
gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-a... 80 4e-028
gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots... 78 7e-028
gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. v... 75 8e-028
gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 ... 80 1e-027
gb|AL505753.1|AL505753 AL505753 Hordeum vulgare Barke roots... 124 1e-027
gb|AV936403.1|AV936403 AV936403 K. Sato unpublished cDNA li... 90 2e-027
gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA li... 56 1e-026
gb|CA000262.1|CA000262 HS09C23u HS Hordeum vulgare subsp. v... 109 1e-026
gb|AV936300.1|AV936300 AV936300 K. Sato unpublished cDNA li... 90 3e-026
gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. v... 79 7e-026
gb|BM369883.2|BM369883 EBem07_SQ004_O04_R embryo, 28 DPA, n... 67 7e-026
gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 ... 84 9e-026
gb|AV936413.1|AV936413 AV936413 K. Sato unpublished cDNA li... 90 9e-026
gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm libra... 75 2e-025
gb|CA023572.1|CA023572 HZ46L02r HZ Hordeum vulgare subsp. v... 71 2e-025
gb|BQ464838.1|BQ464838 HU01M14T HU Hordeum vulgare subsp. v... 116 2e-025
gb|CA007861.1|CA007861 HU09D12r HU Hordeum vulgare subsp. v... 116 2e-025
gb|BI960410.1|BI960410 HVSMEn0024I04f Hordeum vulgare rachi... 99 2e-025
gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm librar... 75 2e-025
gb|AV931570.1|AV931570 AV931570 K. Sato unpublished cDNA li... 99 3e-025
gb|AV934152.1|AV934152 AV934152 K. Sato unpublished cDNA li... 72 3e-025
gb|AV911222.1|AV911222 AV911222 K. Sato unpublished cDNA li... 90 4e-025
gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. v... 81 8e-025
gb|AL450961.1|AL450961 AL450961 Hordeum vulgare Barke etiol... 42 9e-025
gb|BQ467242.1|BQ467242 HS03C04r HS Hordeum vulgare subsp. v... 114 1e-024
gb|CA001675.1|CA001675 HS05E05r HS Hordeum vulgare subsp. v... 114 1e-024
gb|BE454559.2|BE454559 HVSMEh0094E03f Hordeum vulgare 5-45 ... 72 2e-024
gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. v... 100 2e-024
gb|BG343487.1|BG343487 HVSMEg0005O08f Hordeum vulgare pre-a... 66 3e-024
gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA li... 68 4e-024
gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedl... 69 5e-024
gb|CA006616.1|CA006616 HU05D06r HU Hordeum vulgare subsp. v... 112 5e-024
gb|CA020044.1|CA020044 HV14C19r HV Hordeum vulgare subsp. v... 112 5e-024
gb|BF265665.2|BF265665 HV_CEa0013A06f Hordeum vulgare seedl... 72 7e-024
gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedl... 80 8e-024
gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA li... 80 8e-024
gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA li... 80 8e-024
gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. v... 80 8e-024
gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. v... 80 8e-024
gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. v... 80 8e-024
gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. v... 80 8e-024
gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm librar... 69 1e-023
gb|CA006217.1|CA006217 HU05D06u HU Hordeum vulgare subsp. v... 80 1e-023
gb|BM097482.2|BM097482 EBro05_SQ003_L07_R root, 3 week, red... 110 2e-023
gb|BG415622.2|BG415622 HVSMEk0007D09f Hordeum vulgare testa... 84 2e-023
gb|BF628107.2|BF628107 HVSMEb0003C11f Hordeum vulgare seedl... 80 2e-023
gb|BU980008.1|BU980008 HA18D04r HA Hordeum vulgare subsp. v... 95 3e-023
gb|CA003151.1|CA003151 HS09J04r HS Hordeum vulgare subsp. v... 95 3e-023
gb|BF259786.2|BF259786 HVSMEf0020E05f Hordeum vulgare seedl... 79 4e-023
gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-a... 67 5e-023
gb|BJ544054.1|BJ544054 BJ544054 K. Sato unpublished cDNA li... 72 5e-023
gb|CA021911.1|CA021911 HZ41I09r HZ Hordeum vulgare subsp. v... 80 5e-023
gb|BQ767762.1|BQ767762 EBro08_SQ009_D21 _R root, 3 week, dr... 109 5e-023
gb|CA004585.1|CA004585 HS18B01r HS Hordeum vulgare subsp. v... 109 5e-023
gb|BQ663162.1|BQ663162 HU01A05w HU Hordeum vulgare subsp. v... 80 9e-023
gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DA... 62 9e-023
gb|BQ663264.1|BQ663264 HU01M14w HU Hordeum vulgare subsp. v... 80 9e-023
gb|CA010747.1|CA010747 HT08M24u HT Hordeum vulgare subsp. v... 80 9e-023
gb|CA000392.1|CA000392 HS08M20u HS Hordeum vulgare subsp. v... 80 9e-023
gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. v... 80 2e-022
gb|CA013550.1|CA013550 HT08M24r HT Hordeum vulgare subsp. v... 80 2e-022
gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. v... 69 2e-022
gb|CA002692.1|CA002692 HS08E02r HS Hordeum vulgare subsp. v... 80 2e-022
gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA li... 68 3e-022
gb|BM442891.2|BM442891 EBro02_SQ001_L17_R root, 3 week, hyd... 79 3e-022
gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedl... 63 4e-022
gb|BU985911.1|BU985911 HF08P24r HF Hordeum vulgare subsp. v... 71 4e-022
gb|CA009680.1|CA009680 HU14N01r HU Hordeum vulgare subsp. v... 68 5e-022
gb|BE214863.2|BE214863 HV_CEb0004O14f Hordeum vulgare seedl... 105 6e-022
gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green... 73 8e-022
gb|AL503005.1|AL503005 AL503005 Hordeum vulgare Barke roots... 71 1e-021
gb|BQ465481.1|BQ465481 HU03M08r HU Hordeum vulgare subsp. v... 103 2e-021
gb|AL502063.1|AL502063 AL502063 Hordeum vulgare Barke roots... 99 7e-021
gb|BU976322.1|BU976322 HA03I06u HA Hordeum vulgare subsp. v... 99 7e-021
gb|CA000510.1|CA000510 HS08E02u HS Hordeum vulgare subsp. v... 99 7e-021
gb|AJ463296.1|AJ463296 AJ463296 S00002 Hordeum vulgare subs... 99 7e-021
gb|BF064595.2|BF064595 HV_CEb0016A19f Hordeum vulgare seedl... 101 1e-020
gb|BE455566.2|BE455566 HVSMEg0017N13f Hordeum vulgare pre-a... 68 1e-020
gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-a... 67 1e-020
gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. v... 65 3e-020
gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. v... 65 3e-020
gb|BI957985.1|BI957985 HVSMEn0012J23f Hordeum vulgare rachi... 100 4e-020
gb|CV057862.1|CV057862 BNEL31f4 Barley EST endosperm librar... 75 8e-020
gb|BM372782.2|BM372782 EBpi05_SQ003_O16_R pistil, 8 DPA, no... 95 1e-019
gb|AL502301.1|AL502301 AL502301 Hordeum vulgare Barke roots... 71 1e-019
gb|CA011608.1|CA011608 HT03A12r HT Hordeum vulgare subsp. v... 69 1e-019
gb|AJ436475.1|AJ436475 AJ436475 S00002 Hordeum vulgare subs... 94 2e-019
gb|BQ665501.1|BQ665501 HX03O06u HX Hordeum vulgare subsp. v... 94 2e-019
gb|CA017187.1|CA017187 HV14G15u HV Hordeum vulgare subsp. v... 94 2e-019
gb|BJ457952.1|BJ457952 BJ457952 K. Sato unpublished cDNA li... 83 2e-019
gb|AL502427.1|AL502427 AL502427 Hordeum vulgare Barke roots... 97 3e-019
gb|BI958316.1|BI958316 HVSMEn0014G04f Hordeum vulgare rachi... 54 3e-019
gb|BG343982.1|BG343982 HVSMEg0007E19f Hordeum vulgare pre-a... 62 1e-018
gb|BI776330.2|BI776330 EBem04_SQ001_K08_R embryo, 12 DPA, n... 51 1e-018
gb|AV934159.1|AV934159 AV934159 K. Sato unpublished cDNA li... 71 4e-018
gb|BE194523.2|BE194523 HVSMEh0085O04f Hordeum vulgare 5-45 ... 58 2e-017
gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa... 58 2e-017
gb|BG418662.2|BG418662 HVSMEk0023M18f Hordeum vulgare testa... 58 2e-017
gb|BE455022.2|BE455022 HVSMEh0095O05f Hordeum vulgare 5-45 ... 58 2e-017
gb|AL508144.1|AL508144 AL508144 Hordeum vulgare Barke devel... 58 2e-017
gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa... 58 2e-017
gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgar... 58 2e-017
gb|CK125597.1|CK125597 BES1824109c14 BES1824 Hordeum vulgar... 58 2e-017
gb|BG415143.1|BG415143 HVSMEk0005F01f Hordeum vulgare testa... 58 2e-017
gb|BG414757.2|BG414757 HVSMEk0003J21f Hordeum vulgare testa... 58 2e-017
gb|BQ458877.1|BQ458877 HA02P13r HA Hordeum vulgare subsp. v... 58 2e-017
gb|BM373176.2|BM373176 EBma04_SQ003_G09_R maternal, 10 DPA,... 58 2e-017
gb|BQ760073.1|BQ760073 EBpi07_SQ003_J03_R pistil, 12 DPA, n... 58 2e-017
gb|BM098777.2|BM098777 EBpi05_SQ002_A12_R pistil, 8 DPA, no... 58 2e-017
gb|BM373054.2|BM373054 EBma04_SQ002_O16_R maternal, 10 DPA,... 58 2e-017
gb|BE454821.3|BE454821 HVSMEh0095D03f Hordeum vulgare 5-45 ... 58 2e-017
gb|AV918868.1|AV918868 AV918868 K. Sato unpublished cDNA li... 76 2e-017
gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA li... 56 2e-017
gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA li... 56 2e-017
gb|CA004617.1|CA004617 HS18C15r HS Hordeum vulgare subsp. v... 80 5e-017
gb|BU980158.1|BU980158 HA18N13r HA Hordeum vulgare subsp. v... 80 5e-017
gb|CK122370.1|CK122370 BES1824103a12 BES1824 Hordeum vulgar... 77 6e-017
gb|CA023175.1|CA023175 HZ45H08r HZ Hordeum vulgare subsp. v... 73 6e-017
gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA li... 68 9e-017
gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA li... 68 9e-017
gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA li... 68 9e-017
gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA li... 68 9e-017
gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA li... 68 9e-017
gb|BG418101.2|BG418101 HVSMEk0021F02f Hordeum vulgare testa... 58 1e-016
gb|BE602882.1|BE602882 HVSMEh0100J05f Hordeum vulgare 5-45 ... 58 1e-016
gb|AV936412.1|AV936412 AV936412 K. Sato unpublished cDNA li... 88 1e-016
gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DA... 54 1e-016
gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA li... 68 1e-016
gb|CA001406.1|CA001406 HS18B01u HS Hordeum vulgare subsp. v... 80 1e-016
gb|CA015542.1|CA015542 HT14K06r HT Hordeum vulgare subsp. v... 60 1e-016
gb|BE601965.2|BE601965 HVSMEh0100J12f Hordeum vulgare 5-45 ... 57 3e-016
gb|AL507235.1|AL507235 AL507235 Hordeum vulgare Barke devel... 56 4e-016
gb|BM443024.2|BM443024 EBro02_SQ002_D15_R root, 3 week, hyd... 86 5e-016
gb|BF265663.2|BF265663 HV_CEa0013A04f Hordeum vulgare seedl... 67 8e-016
gb|BG415589.2|BG415589 HVSMEk0007B19f Hordeum vulgare testa... 57 8e-016
gb|BI957946.1|BI957946 HVSMEn0012F23f Hordeum vulgare rachi... 85 1e-015
gb|AL500247.1|AL500247 AL500247 Hordeum vulgare Barke etiol... 84 1e-015
gb|AL500592.1|AL500592 AL500592 Hordeum vulgare Barke roots... 55 3e-015
gb|BG414416.1|BG414416 HVSMEk0002H01f Hordeum vulgare testa... 58 4e-015
gb|BG415963.1|BG415963 HVSMEk0009D15f Hordeum vulgare testa... 58 5e-015
gb|AV924570.1|AV924570 AV924570 K. Sato unpublished cDNA li... 83 5e-015
gb|BG418507.1|BG418507 HVSMEk0022O17f Hordeum vulgare testa... 58 5e-015
gb|BM374136.2|BM374136 EBma03_SQ003_M01_R maternal, 8 DPA, ... 58 5e-015
gb|BM099821.2|BM099821 EBes01_SQ004_F24_R embryo sac, 4-6 D... 58 9e-015
gb|BI776379.2|BI776379 EBpi05_SQ001_B03_R pistil, 8 DPA, no... 58 9e-015
gb|BF626636.3|BF626636 HVSMEa0018P10f Hordeum vulgare seedl... 81 1e-014
gb|BF259291.3|BF259291 HVSMEf0018M18f Hordeum vulgare seedl... 55 2e-014
gb|CA002529.1|CA002529 HS07M14r HS Hordeum vulgare subsp. v... 81 2e-014
gb|CA002850.1|CA002850 HS08L10r HS Hordeum vulgare subsp. v... 81 2e-014
gb|CA002883.1|CA002883 HS08M20r HS Hordeum vulgare subsp. v... 81 2e-014
gb|CK123698.1|CK123698 BES1824105b24 BES1824 Hordeum vulgar... 80 2e-014
gb|BG414602.1|BG414602 HVSMEk0003A18f Hordeum vulgare testa... 58 3e-014
gb|BM099969.2|BM099969 EBes01_SQ004_M17_R embryo sac, 4-6 D... 58 3e-014
gb|CA030421.1|CA030421 HX07A07r HX Hordeum vulgare subsp. v... 53 3e-014
gb|BF262808.2|BF262808 HV_CEa0005A08f Hordeum vulgare seedl... 80 3e-014
gb|BU980172.1|BU980172 HA18O07r HA Hordeum vulgare subsp. v... 58 4e-014
gb|AL508824.1|AL508824 AL508824 Hordeum vulgare Barke devel... 61 5e-014
gb|BE519901.1|BE519901 HV_CEb0021K08f Hordeum vulgare seedl... 61 6e-014
gb|BF258617.2|BF258617 HVSMEf0016D02f Hordeum vulgare seedl... 79 8e-014
gb|BU972166.1|BU972166 HB20N02r BC Hordeum vulgare subsp. v... 78 1e-013
gb|BJ469082.1|BJ469082 BJ469082 K. Sato unpublished cDNA li... 45 2e-013
gb|BF264429.3|BF264429 HV_CEa0009G11f Hordeum vulgare seedl... 54 3e-013
gb|CV059539.1|CV059539 BNEL49c1 Barley EST endosperm librar... 48 3e-013
gb|BI956550.1|BI956550 HVSMEn0004B16f Hordeum vulgare rachi... 41 3e-013
gb|CA028522.1|CA028522 HZ62E15r HZ Hordeum vulgare subsp. v... 60 7e-013
gb|BG300073.1|BG300073 HVSMEb0011F07f Hordeum vulgare seedl... 48 9e-013
gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA li... 54 1e-012
gb|AL507080.1|AL507080 AL507080 Hordeum vulgare Barke devel... 60 1e-012
gb|CA024529.1|CA024529 HZ49J01r HZ Hordeum vulgare subsp. v... 60 1e-012
gb|CA025466.1|CA025466 HZ52D24r HZ Hordeum vulgare subsp. v... 60 1e-012
gb|CA021688.1|CA021688 HZ40M24r HZ Hordeum vulgare subsp. v... 60 1e-012
gb|CA026014.1|CA026014 HZ53N10r HZ Hordeum vulgare subsp. v... 60 1e-012
gb|CA022672.1|CA022672 HZ44A09r HZ Hordeum vulgare subsp. v... 60 1e-012
gb|BF065218.2|BF065218 HV_CEb0024E13f Hordeum vulgare seedl... 57 1e-012
gb|BG366287.1|BG366287 HVSMEi0006J10f Hordeum vulgare 20 DA... 53 2e-012
gb|BF627941.2|BF627941 HVSMEb0006M19f Hordeum vulgare seedl... 73 3e-012
gb|AW982197.2|AW982197 HVSMEg0002E02f Hordeum vulgare pre-a... 48 3e-012
gb|BM816368.1|BM816368 HB02H12_T3.ab1 HB Hordeum vulgare su... 61 3e-012
gb|AV928908.1|AV928908 AV928908 K. Sato unpublished cDNA li... 69 3e-012
gb|CA010224.1|CA010224 HT11I05u HT Hordeum vulgare subsp. v... 61 3e-012
gb|BG417852.1|BG417852 HVSMEk0019M01f Hordeum vulgare testa... 58 5e-012
gb|BG415421.2|BG415421 HVSMEk0006G24f Hordeum vulgare testa... 57 5e-012
gb|BI953687.1|BI953687 HVSMEm0013N22f Hordeum vulgare green... 50 6e-012
gb|AL504779.1|AL504779 AL504779 Hordeum vulgare Barke roots... 72 7e-012
gb|CA028585.1|CA028585 HZ62I09r HZ Hordeum vulgare subsp. v... 60 8e-012
gb|CA005674.1|CA005674 HU09D12u HU Hordeum vulgare subsp. v... 63 9e-012
gb|BG299416.1|BG299416 HVSMEa0019O06f Hordeum vulgare seedl... 61 1e-011
gb|BE215940.1|BE215940 HV_CEb0008O10f Hordeum vulgare seedl... 61 1e-011
gb|BQ463596.1|BQ463596 HI05N09r HI Hordeum vulgare subsp. v... 60 2e-011
gb|CB874863.1|CB874863 HX06I17w HX Hordeum vulgare subsp. v... 70 4e-011
gb|CB875366.1|CB875366 HX08B09w HX Hordeum vulgare subsp. v... 70 4e-011
gb|BI950383.1|BI950383 HVSMEl0020H16f Hordeum vulgare spike... 51 2e-010
gb|BI959232.1|BI959232 HVSMEn0018M12f Hordeum vulgare rachi... 68 2e-010
gb|CA010479.1|CA010479 HT09N23u HT Hordeum vulgare subsp. v... 68 2e-010
gb|CB876883.1|CB876883 HP02M04T HP Hordeum vulgare subsp. v... 68 2e-010
gb|CB879567.1|CB879567 HP02M04w HP Hordeum vulgare subsp. v... 68 2e-010
gb|U77463.1|HVU77463 Hordeum vulgare NADPH-dependent HC-tox... 59 5e-010
gb|BG418002.1|BG418002 HVSMEk0020J24f Hordeum vulgare testa... 46 5e-010
gb|AV909332.1|AV909332 AV909332 K. Sato unpublished cDNA li... 66 6e-010
gb|CA003035.1|CA003035 HS09C23r HS Hordeum vulgare subsp. v... 56 9e-010
gb|BG415394.2|BG415394 HVSMEk0006F01f Hordeum vulgare testa... 33 1e-009
gb|AL503414.1|AL503414 AL503414 Hordeum vulgare Barke roots... 65 1e-009
gb|BU986702.1|BU986702 HF12K17r HF Hordeum vulgare subsp. v... 65 1e-009
gb|BI957282.1|BI957282 HVSMEn0008K03f Hordeum vulgare rachi... 64 2e-009
gb|CA022119.1|CA022119 HZ42D14r HZ Hordeum vulgare subsp. v... 48 2e-009
gb|BG415627.1|BG415627 HVSMEk0007E01f Hordeum vulgare testa... 52 2e-009
gb|BI958218.1|BI958218 HVSMEn0013O24f Hordeum vulgare rachi... 51 4e-009
gb|CA030770.1|CA030770 HX08B09r HX Hordeum vulgare subsp. v... 48 1e-008
gb|CA030259.1|CA030259 HX06I17r HX Hordeum vulgare subsp. v... 48 1e-008
gb|BE216828.1|BE216828 HV_CEb0011L15f Hordeum vulgare seedl... 61 1e-008
gb|BF629372.2|BF629372 HVSMEb0012B02f Hordeum vulgare seedl... 61 2e-008
gb|BF617154.2|BF617154 HVSMEc0014M14f Hordeum vulgare seedl... 61 2e-008
gb|BF259679.3|BF259679 HVSMEf0019P15f Hordeum vulgare seedl... 61 2e-008
gb|BU973464.1|BU973464 HB25A15r BC Hordeum vulgare subsp. v... 60 4e-008
gb|CA028959.1|CA028959 HZ63L24r HZ Hordeum vulgare subsp. v... 60 4e-008
gb|CA029028.1|CA029028 HZ63P19r HZ Hordeum vulgare subsp. v... 60 4e-008
gb|BF622324.3|BF622324 HVSMEa0002M09f Hordeum vulgare seedl... 59 5e-008
gb|BI951805.1|BI951805 HVSMEm0002P16f Hordeum vulgare green... 59 5e-008
gb|BE216447.2|BE216447 HV_CEb0010I08f Hordeum vulgare seedl... 59 5e-008
gb|CA023475.1|CA023475 HZ46F22r HZ Hordeum vulgare subsp. v... 59 5e-008
gb|CV053795.1|CV053795 BNEL103c4 Barley EST endosperm libra... 59 5e-008
gb|CV059845.1|CV059845 BNEL51e9 Barley EST endosperm librar... 59 5e-008
gb|CV059881.1|CV059881 BNEL52a10 Barley EST endosperm libra... 59 5e-008
emb|AJ234689.1|HVU234689 Hordeum vulgare genomic DNA fragme... 59 7e-008
gb|CK125468.1|CK125468 BES1824108j23 BES1824 Hordeum vulgar... 58 1e-007
gb|CA024897.1|CA024897 HZ50K06r HZ Hordeum vulgare subsp. v... 48 1e-007
gb|BG416445.2|BG416445 HVSMEk0012E19f Hordeum vulgare testa... 58 1e-007
gb|CA028570.1|CA028570 HZ62H10r HZ Hordeum vulgare subsp. v... 58 1e-007
gb|AV836954.1|AV836954 AV836954 K. Sato unpublished cDNA li... 56 5e-007
gb|BI958721.1|BI958721 HVSMEn0016F17f Hordeum vulgare rachi... 56 5e-007
gb|BU989611.1|BU989611 HF22D10r HF Hordeum vulgare subsp. v... 52 5e-007
gb|CA011693.1|CA011693 HT03E16r HT Hordeum vulgare subsp. v... 40 7e-007
gb|BE454948.2|BE454948 HVSMEh0095J23f Hordeum vulgare 5-45 ... 55 9e-007
gb|BU968989.1|BU968989 HB10D02r BC Hordeum vulgare subsp. v... 52 1e-006
gb|CB876200.1|CB876200 HX10J08w HX Hordeum vulgare subsp. v... 55 1e-006
gb|BG418326.2|BG418326 HVSMEk0022F08f Hordeum vulgare testa... 52 2e-006
gb|CB876594.1|CB876594 HX11M09w HX Hordeum vulgare subsp. v... 54 2e-006
gb|BI947788.1|BI947788 HVSMEl0006P04f Hordeum vulgare spike... 52 2e-006
gb|BG418655.1|BG418655 HVSMEk0023L22f Hordeum vulgare testa... 52 3e-006
gb|BQ762251.1|BQ762251 EBro01_SQ005_C12_R root, 3 week, hyd... 53 3e-006
gb|CV054031.1|CV054031 BNEL106a12 Barley EST endosperm libr... 53 3e-006
gb|BG418144.1|BG418144 HVSMEk0021J04f Hordeum vulgare testa... 51 4e-006
gb|BM442085.2|BM442085 EBan01_SQ002_C10_R anther, yellow st... 53 4e-006
gb|BG415494.2|BG415494 HVSMEk0006L12f Hordeum vulgare testa... 32 6e-006
gb|AL509289.1|AL509289 AL509289 Hordeum vulgare Barke devel... 52 8e-006
gb|BG415076.1|BG415076 HVSMEk0005B01f Hordeum vulgare testa... 52 8e-006
gb|BG418468.1|BG418468 HVSMEk0022M20f Hordeum vulgare testa... 52 8e-006
gb|BG418838.1|BG418838 HVSMEk0024K23f Hordeum vulgare testa... 52 8e-006
gb|BG414954.2|BG414954 HVSMEk0004G14f Hordeum vulgare testa... 52 8e-006
gb|BG415124.2|BG415124 HVSMEk0005E02f Hordeum vulgare testa... 52 8e-006
gb|BG415462.2|BG415462 HVSMEk0006J09f Hordeum vulgare testa... 52 8e-006
gb|BG415670.2|BG415670 HVSMEk0007G09f Hordeum vulgare testa... 52 8e-006
gb|BG415939.2|BG415939 HVSMEk0009B24f Hordeum vulgare testa... 52 8e-006
gb|BG416339.2|BG416339 HVSMEk0011I02f Hordeum vulgare testa... 52 8e-006
gb|BG416830.2|BG416830 HVSMEk0014L21f Hordeum vulgare testa... 52 8e-006
gb|BG418306.2|BG418306 HVSMEk0022D23f Hordeum vulgare testa... 52 8e-006
gb|BG418737.2|BG418737 HVSMEk0024D17f Hordeum vulgare testa... 52 8e-006
gb|BQ464055.1|BQ464055 HF01D16T HF Hordeum vulgare subsp. v... 52 8e-006
gb|BQ464522.1|BQ464522 HF02I09r HF Hordeum vulgare subsp. v... 52 8e-006
gb|BM374015.2|BM374015 EBma03_SQ003_G06_R maternal, 8 DPA, ... 52 8e-006
gb|BI776565.2|BI776565 EBpi07_SQ001_A03_R pistil, 12 DPA, n... 52 8e-006
gb|BI776566.2|BI776566 EBpi07_SQ001_A05_R pistil, 12 DPA, n... 52 8e-006
gb|BM097043.2|BM097043 EBpi07_SQ002_D13_R pistil, 12 DPA, n... 52 8e-006
gb|BG416536.1|BG416536 HVSMEk0012M16f Hordeum vulgare testa... 51 1e-005
gb|BG418085.1|BG418085 HVSMEk0021D16f Hordeum vulgare testa... 51 1e-005
gb|BG414253.2|BG414253 HVSMEk0002D14f Hordeum vulgare testa... 51 1e-005
gb|BG414733.1|BG414733 HVSMEk0003H17f Hordeum vulgare testa... 33 1e-005
gb|BU974025.1|BU974025 HB26K23r BC Hordeum vulgare subsp. v... 33 1e-005
gb|BG416815.1|BG416815 HVSMEk0014K10f Hordeum vulgare testa... 51 2e-005
gb|BG416538.2|BG416538 HVSMEk0012M19f Hordeum vulgare testa... 50 3e-005
gb|BG417930.2|BG417930 HVSMEk0020A06f Hordeum vulgare testa... 50 3e-005
gb|BU974661.1|BU974661 HB28L02r BC Hordeum vulgare subsp. v... 33 5e-005
gb|BG417805.2|BG417805 HVSMEk0019J07f Hordeum vulgare testa... 35 7e-005
gb|BJ459873.1|BJ459873 BJ459873 K. Sato unpublished cDNA li... 49 8e-005
gb|BG415176.1|BG415176 HVSMEk0005H03f Hordeum vulgare testa... 48 1e-004
gb|BG418132.2|BG418132 HVSMEk0021I05f Hordeum vulgare testa... 48 1e-004
gb|BJ476181.1|BJ476181 BJ476181 K. Sato unpublished cDNA li... 48 1e-004
gb|CA024146.1|CA024146 HZ48H20r HZ Hordeum vulgare subsp. v... 48 1e-004
gb|CA026624.1|CA026624 HZ56H06r HZ Hordeum vulgare subsp. v... 48 1e-004
gb|CA026625.1|CA026625 HZ56H08r HZ Hordeum vulgare subsp. v... 48 1e-004
gb|BF255262.2|BF255262 HVSMEf0006G06f Hordeum vulgare seedl... 48 1e-004
gb|BQ767067.1|BQ767067 EBro08_SQ007_J24_R root, 3 week, dro... 46 4e-004
gb|BI952496.1|BI952496 HVSMEm0006K21f Hordeum vulgare green... 34 6e-004
gb|BM444089.1|BM444089 EBem09_SQ004_C03_R embryo, 1 Day ger... 40 7e-004
gb|BQ759922.1|BQ759922 EBpi05_SQ004_I19_R pistil, 8 DPA, no... 43 0.001
gb|BE195461.2|BE195461 HVSMEh0089L18f Hordeum vulgare 5-45 ... 45 0.001
gb|AV935958.1|AV935958 AV935958 K. Sato unpublished cDNA li... 45 0.001
gb|BJ459644.1|BJ459644 BJ459644 K. Sato unpublished cDNA li... 45 0.001
gb|BJ474296.1|BJ474296 BJ474296 K. Sato unpublished cDNA li... 45 0.001
gb|CA003156.1|CA003156 HS09J09r HS Hordeum vulgare subsp. v... 45 0.001
gb|CA007755.1|CA007755 HU08O17r HU Hordeum vulgare subsp. v... 45 0.001
gb|BU986605.1|BU986605 HF12G04r HF Hordeum vulgare subsp. v... 32 0.002
gb|BQ656581.1|BQ656581 HA02P13u HA Hordeum vulgare subsp. v... 43 0.004
gb|BU987256.1|BU987256 HF14D22r HF Hordeum vulgare subsp. v... 43 0.004
gb|BG416334.1|BG416334 HVSMEk0011G15f Hordeum vulgare testa... 30 0.005
gb|BG414609.1|BG414609 HVSMEk0003B03f Hordeum vulgare testa... 33 0.006
gb|BE454477.3|BE454477 HVSMEh0094J18f Hordeum vulgare 5-45 ... 42 0.007
gb|BI957576.1|BI957576 HVSMEn0010D08f Hordeum vulgare rachi... 42 0.009
gb|BF266978.3|BF266978 HV_CEa0016J13f Hordeum vulgare seedl... 42 0.009
gb|BU995473.1|BU995473 HM10F22r HM Hordeum vulgare subsp. v... 41 0.013
gb|CB881620.1|CB881620 HM10F22w HM Hordeum vulgare subsp. v... 41 0.013
gb|BI949400.1|BI949400 HVSMEl0013L11f Hordeum vulgare spike... 29 0.014
gb|BI958874.1|BI958874 HVSMEn0016P13f Hordeum vulgare rachi... 41 0.017
gb|BG415816.2|BG415816 HVSMEk0008A04f Hordeum vulgare testa... 41 0.017
gb|BM816369.1|BM816369 HC114C06_SK.ab1 HC Hordeum vulgare s... 40 0.024
gb|BF253508.3|BF253508 HVSMEf0001C03f Hordeum vulgare seedl... 40 0.029
gb|CB882307.1|CB882307 HL01H23w HL Hordeum vulgare subsp. v... 36 0.038
gb|BI958574.1|BI958574 HVSMEn0015L12f Hordeum vulgare rachi... 36 0.041
gb|BI957438.1|BI957438 HVSMEn0009I23f Hordeum vulgare rachi... 36 0.043
gb|CK124463.1|CK124463 BES1824109d17 BES1824 Hordeum vulgar... 36 0.046
gb|CD663589.1|CD663589 UCRHV18_06aa01_b1 Drought-stressed D... 38 0.12
gb|CA023465.1|CA023465 HZ46F08r HZ Hordeum vulgare subsp. v... 38 0.16
gb|CA022327.1|CA022327 HZ42M18r HZ Hordeum vulgare subsp. v... 37 0.22
gb|BM369917.2|BM369917 EBem07_SQ004_P15_R embryo, 28 DPA, n... 37 0.30
gb|BJ547904.1|BJ547904 BJ547904 K. Sato unpublished cDNA li... 33 0.37
gb|AV837089.1|AV837089 AV837089 K. Sato unpublished cDNA li... 36 0.42
gb|BI957841.1|BI957841 HVSMEn0011K01f Hordeum vulgare rachi... 36 0.42
gb|BI957964.1|BI957964 HVSMEn0012J06f Hordeum vulgare rachi... 36 0.42
gb|BG418436.1|BG418436 HVSMEk0022L05f Hordeum vulgare testa... 36 0.42
gb|AV919828.1|AV919828 AV919828 K. Sato unpublished cDNA li... 36 0.42
gb|CA004075.1|CA004075 HS16H11r HS Hordeum vulgare subsp. v... 36 0.42
gb|BQ470611.1|BQ470611 HX03H22r HX Hordeum vulgare subsp. v... 33 0.47
gb|CA017471.1|CA017471 HV05E22r HV Hordeum vulgare subsp. v... 33 0.50
gb|CB879349.1|CB879349 HP11N15T HP Hordeum vulgare subsp. v... 33 0.60
gb|BI776439.2|BI776439 EBpi05_SQ001_F15_R pistil, 8 DPA, no... 31 0.62
gb|AL505147.1|AL505147 AL505147 Hordeum vulgare Barke roots... 33 0.64
gb|BF629003.2|BF629003 HVSMEb0009I07f Hordeum vulgare seedl... 35 0.78
gb|BU984648.1|BU984648 HF04J02r HF Hordeum vulgare subsp. v... 35 0.78
gb|BG417987.1|BG417987 HVSMEk0020D22f Hordeum vulgare testa... 31 0.82
gb|BF254670.2|BF254670 HVSMEf0004K24f Hordeum vulgare seedl... 34 0.84
gb|BI954503.1|BI954503 HVSMEm0018E24f Hordeum vulgare green... 32 0.90
gb|AL500963.1|AL500963 AL500963 Hordeum vulgare Barke roots... 35 1.1
gb|AL503983.1|AL503983 AL503983 Hordeum vulgare Barke roots... 35 1.1
gb|AL505244.1|AL505244 AL505244 Hordeum vulgare Barke roots... 35 1.1
gb|BF623253.2|BF623253 HVSMEa0016A21f Hordeum vulgare seedl... 35 1.1
gb|BF616744.2|BF616744 HVSMEc0012H19f Hordeum vulgare seedl... 35 1.1
gb|BF255282.2|BF255282 HVSMEf0006H03f Hordeum vulgare seedl... 35 1.1
gb|BF256360.2|BF256360 HVSMEf0009F18f Hordeum vulgare seedl... 35 1.1
gb|BF256302.2|BF256302 HVSMEf0009N03f Hordeum vulgare seedl... 35 1.1
gb|BF259056.2|BF259056 HVSMEf0017I18f Hordeum vulgare seedl... 35 1.1
gb|BF260588.2|BF260588 HVSMEf0022G13f Hordeum vulgare seedl... 35 1.1
gb|AW982246.2|AW982246 HVSMEg0002I03f Hordeum vulgare pre-a... 35 1.1
gb|BI948529.1|BI948529 HVSMEl0009P20f Hordeum vulgare spike... 35 1.1
gb|BF264888.2|BF264888 HV_CEa0010K14f Hordeum vulgare seedl... 35 1.1
gb|BF260931.3|BF260931 HVSMEf0023F03f Hordeum vulgare seedl... 35 1.1
gb|BG344644.2|BG344644 HVSMEg0009O11f Hordeum vulgare pre-a... 35 1.1
gb|BG344806.2|BG344806 HVSMEg0016C14f Hordeum vulgare pre-a... 35 1.1
gb|BG365377.2|BG365377 HVSMEi0002H14f Hordeum vulgare 20 DA... 35 1.1
gb|AV916363.1|AV916363 AV916363 K. Sato unpublished cDNA li... 35 1.1
gb|AV933555.1|AV933555 AV933555 K. Sato unpublished cDNA li... 35 1.1
gb|BQ470539.1|BQ470539 HX03E16r HX Hordeum vulgare subsp. v... 35 1.1
gb|BM375570.2|BM375570 EBem06_SQ003_L21_R embryo, 21 DPA, n... 35 1.1
gb|BU979790.1|BU979790 HA17F05r HA Hordeum vulgare subsp. v... 35 1.1
gb|CA002359.1|CA002359 HS07E04r HS Hordeum vulgare subsp. v... 35 1.1
gb|CA006682.1|CA006682 HU05G13r HU Hordeum vulgare subsp. v... 35 1.1
gb|CA018299.1|CA018299 HV08D12r HV Hordeum vulgare subsp. v... 35 1.1
gb|CA022239.1|CA022239 HZ42I21r HZ Hordeum vulgare subsp. v... 35 1.1
gb|CA025125.1|CA025125 HZ51E13r HZ Hordeum vulgare subsp. v... 35 1.1
gb|BJ547158.1|BJ547158 BJ547158 K. Sato unpublished cDNA li... 35 1.1
gb|CA015599.1|CA015599 HT14M24r HT Hordeum vulgare subsp. v... 31 1.1
gb|CA006589.1|CA006589 HU05B23r HU Hordeum vulgare subsp. v... 31 1.2
gb|BG414735.1|BG414735 HVSMEk0003H19f Hordeum vulgare testa... 27 1.2
gb|BG415687.1|BG415687 HVSMEk0007H02f Hordeum vulgare testa... 26 1.2
gb|CK123892.1|CK123892 BES1824105p01 BES1824 Hordeum vulgar... 31 1.3
gb|BF065887.2|BF065887 HV_CEb0014E07f Hordeum vulgare seedl... 31 1.4
gb|BF065908.2|BF065908 HV_CEb0014F07f Hordeum vulgare seedl... 31 1.4
gb|BI955181.1|BI955181 HVSMEm0021M07f Hordeum vulgare green... 35 1.5
gb|BM376116.1|BM376116 EBma01_SQ002_G11_R maternal, 4 DPA, ... 29 1.7
gb|BI957026.1|BI957026 HVSMEn0007B01f Hordeum vulgare rachi... 34 2.0
gb|BF261472.2|BF261472 HV_CEa0001G01f Hordeum vulgare seedl... 34 2.0
gb|BQ467416.1|BQ467416 HS03K24r HS Hordeum vulgare subsp. v... 34 2.0
gb|BQ753586.1|BQ753586 EBan01_SQ004_K21_R anther, yellow st... 34 2.0
gb|BJ458842.1|BJ458842 BJ458842 K. Sato unpublished cDNA li... 26 2.2
gb|BJ451345.1|BJ451345 BJ451345 K. Sato unpublished cDNA li... 26 2.3
gb|CA002275.1|CA002275 HS06P18r HS Hordeum vulgare subsp. v... 26 2.3
gb|BU990047.1|BU990047 HF23N24r HF Hordeum vulgare subsp. v... 26 2.3
gb|CA001438.1|CA001438 HS17O13u HS Hordeum vulgare subsp. v... 26 2.3
gb|BF266457.3|BF266457 HV_CEa0015D01f Hordeum vulgare seedl... 34 2.8
gb|BM377903.2|BM377903 EBem04_SQ004_I14_R embryo, 12 DPA, n... 34 2.8
gb|BM375886.2|BM375886 EBem06_SQ004_L02_R embryo, 21 DPA, n... 34 2.8
gb|BM098016.2|BM098016 EBpi03_SQ002_F01_R pistil, 4 DPA, no... 34 2.8
gb|BQ767722.1|BQ767722 EBro08_SQ009_M16_R root, 3 week, dro... 34 2.8
gb|CA031727.1|CA031727 HX10P06r HX Hordeum vulgare subsp. v... 31 3.7
gb|BI957569.1|BI957569 HVSMEn0010D01f Hordeum vulgare rachi... 29 3.8
gb|BF625043.2|BF625043 HVSMEa0005J16f Hordeum vulgare seedl... 33 3.8
gb|BF619966.2|BF619966 HVSMEc0009N15f Hordeum vulgare seedl... 33 3.8
gb|BI952344.1|BI952344 HVSMEm0006A05f Hordeum vulgare green... 33 3.8
gb|BF264034.2|BF264034 HV_CEa0008F17f Hordeum vulgare seedl... 33 3.8
gb|BF264463.2|BF264463 HV_CEa0009H22f Hordeum vulgare seedl... 33 3.8
gb|BF268052.2|BF268052 HV_CEa0019L10f Hordeum vulgare seedl... 33 3.8
gb|AV916039.1|AV916039 AV916039 K. Sato unpublished cDNA li... 33 3.8
gb|BJ452324.1|BJ452324 BJ452324 K. Sato unpublished cDNA li... 33 3.8
gb|BJ465519.1|BJ465519 BJ465519 K. Sato unpublished cDNA li... 33 3.8
gb|BJ467580.1|BJ467580 BJ467580 K. Sato unpublished cDNA li... 33 3.8
gb|BQ463226.1|BQ463226 HI04H02r HI Hordeum vulgare subsp. v... 33 3.8
gb|BQ661983.1|BQ661983 HR01B14u HR Hordeum vulgare subsp. v... 33 3.8
gb|BU994663.1|BU994663 HM07M14r HM Hordeum vulgare subsp. v... 33 3.8
gb|BU996599.1|BU996599 HM14C06r HM Hordeum vulgare subsp. v... 33 3.8
gb|BU996773.1|BU996773 HM14L09r HM Hordeum vulgare subsp. v... 33 3.8
gb|CA018755.1|CA018755 HV09J01r HV Hordeum vulgare subsp. v... 33 3.8
gb|CA019956.1|CA019956 HV13O16r HV Hordeum vulgare subsp. v... 33 3.8
gb|BI949265.1|BI949265 HVSMEl0013B06f Hordeum vulgare spike... 31 3.9
gb|BE194788.1|BE194788 HVSMEh0086O15f Hordeum vulgare 5-45 ... 25 4.0
gb|BI957698.1|BI957698 HVSMEn0010L15f Hordeum vulgare rachi... 28 5.2
gb|BF258970.2|BF258970 HVSMEf0017D19f Hordeum vulgare seedl... 33 5.3
gb|BI957506.1|BI957506 HVSMEn0009O15f Hordeum vulgare rachi... 33 5.3
gb|BF267125.3|BF267125 HV_CEa0017A10f Hordeum vulgare seedl... 33 5.3
gb|AV914540.1|AV914540 AV914540 K. Sato unpublished cDNA li... 33 5.3
gb|AV932124.1|AV932124 AV932124 K. Sato unpublished cDNA li... 33 5.3
gb|AV934968.1|AV934968 AV934968 K. Sato unpublished cDNA li... 33 5.3
gb|BJ449536.1|BJ449536 BJ449536 K. Sato unpublished cDNA li... 33 5.3
gb|BJ456970.1|BJ456970 BJ456970 K. Sato unpublished cDNA li... 33 5.3
gb|BJ460115.1|BJ460115 BJ460115 K. Sato unpublished cDNA li... 33 5.3
gb|BJ469599.1|BJ469599 BJ469599 K. Sato unpublished cDNA li... 33 5.3
gb|BJ472095.1|BJ472095 BJ472095 K. Sato unpublished cDNA li... 33 5.3
gb|BJ473300.1|BJ473300 BJ473300 K. Sato unpublished cDNA li... 33 5.3
gb|BJ476647.1|BJ476647 BJ476647 K. Sato unpublished cDNA li... 33 5.3
gb|BJ477483.1|BJ477483 BJ477483 K. Sato unpublished cDNA li... 33 5.3
gb|BM442172.2|BM442172 EBan01_SQ002_G21_R anther, yellow st... 33 5.3
gb|BM440894.2|BM440894 EBca01_SQ001_L10_R carpel, pre-anthe... 33 5.3
gb|CA028111.1|CA028111 HZ61A12r HZ Hordeum vulgare subsp. v... 33 5.3
gb|BF616994.2|BF616994 HVSMEc0014D12f Hordeum vulgare seedl... 27 5.4
gb|BF628717.2|BF628717 HVSMEb0007G17f Hordeum vulgare seedl... 28 5.5
gb|CV060055.1|CV060055 BNEL53h4 Barley EST endosperm librar... 27 5.5
>gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_F23 5', mRNA sequence
Length = 657
Score = 296 bits (640), Expect(2) = e-103
Identities = 116/154 (75%), Positives = 129/154 (83%)
Frame = +3 / +1
Query: 222 VKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVF 401
VKRLL+KGYTVRGTVRNPVDPKNDHLRA DG P++L EAF+GC+G+F
Sbjct: 1 VKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRADLMEPETLVEAFTGCEGIF 180
Query: 402 HAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDT 581
HAASPVTDDPE MIEPAIRGT+YV+ AA D G+KRVVFTS+IGTVYMNP+RDPSKPVDDT
Sbjct: 181 HAASPVTDDPEKMIEPAIRGTKYVITAAADMGIKRVVFTSTIGTVYMNPHRDPSKPVDDT 360
Query: 582 CWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
CWSDL+YCK T NWYCYAKTVAEQ A E AR+RG
Sbjct: 361 CWSDLDYCKKTANWYCYAKTVAEQDALETARQRG 462
Score = 244 bits (528), Expect(2) = 7e-071
Identities = 117/174 (67%), Positives = 120/174 (68%)
Frame = -2 / -2
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXXXXXXXXX 698
CA GAS TRTCASATSLTCTYACAAFT V+ADPVRYFIT SVLAFTVGC
Sbjct: 656 CASGAS*TRTCASATSLTCTYACAAFTYVLADPVRYFITCSVLAFTVGCSSGPSTSTRFT 477
Query: 697 XXXXXXXXXXXSHAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMED 518
S A CSATVLA*QYQF VFLQ SRSLQQVSSTGLLGS GFMYTVPM D
Sbjct: 476 TTSSMPRCRAVSSASCSATVLA*QYQFAVFLQ*SRSLQQVSSTGLLGSLWGFMYTVPMVD 297
Query: 517 VNTTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARLCG 356
V TTR P S+AA IT VPR SVTGEAAWK PSQP KAS R+ G
Sbjct: 296 VKTTRLMPMSAAAVITYLVPRIAGSIIFSGSSVTGEAAWKMPSQPVKASTRVSG 135
Score = 132 bits (283), Expect(2) = 9e-032
Identities = 61/125 (48%), Positives = 76/125 (60%)
Frame = -1 / -1
Query: 596 EVAPAGVVHRLXXXXXXXXXXXXXXGREHDALHSGXXXXXXXXXXAPDRWLDHHLRVIGD 417
+VAPAGV+ L RE+ L + PDR LDH LRV+GD
Sbjct: 375 KVAPAGVIDGLAGVPVGVHVHRADGRRENHTLDAHVRGCSDHVLGPPDRRLDHLLRVVGD 196
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALL 237
G GVEDA+ AGEGL + W+ ++GAEEDE V GAVKG QV+VLWI+RV + A+ V LL
Sbjct: 195 GGSGVEDALAAGEGLDEGFWLHKIGAEEDEAVGGAVKGSQVIVLWINRVANGASHGVPLL 16
Query: 236 QEALD 222
+EALD
Sbjct: 15 EEALD 1
Score = 100 bits (214), Expect(2) = e-103
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAH 878
NAST+HVMKYLTGSA TYVNAAQAYVHV+DVAEAHVRVYEAP AH
Sbjct: 523 NASTEHVMKYLTGSAKTYVNAAQAYVHVKDVAEAHVRVYEAPDAH 657
Score = 44.6 bits (91), Expect(3) = 7e-015
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +2 / +3
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
EP PQQA HLLERP +LQ+ ELVLLRQD
Sbjct: 321 EPPQGPQQARR*HLLERP*LLQKDSELVLLRQD 419
Score = 44.1 bits (90), Expect(2) = 7e-071
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRL 224
SFFGSTG TVPRTV PF RRRL
Sbjct: 71 SFFGSTGLRTVPRTVYPFWRRRL 3
Score = 40.0 bits (81), Expect(3) = 7e-015
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 749 QHGPRDEVPDGVGHDLRE 802
+HG RDEVPDGVG D+RE
Sbjct: 528 EHGARDEVPDGVGQDVRE 581
Score = 38.6 bits (78), Expect(3) = 7e-015
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2 / +3
Query: 224 QAPPGEGLHSPRHGQEPCGSKE 289
QAPP EG+H RH +PC SKE
Sbjct: 3 QAPPPEGVHRARHRSQPC*SKE 68
Score = 38.2 bits (77), Expect = 0.12
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3 / -3
Query: 606 CNTRGRSSRCRPQACWGHGRGS 541
C+++GRSSRC +ACWG GS
Sbjct: 385 CSSQGRSSRCHRRACWGPCGGS 320
Score = 35.4 bits (71), Expect = 0.78
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +1 / +2
Query: 223 SSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTHR 363
SSAS RR T A TL IQRT T* PL W+ +
Sbjct: 2 SSASSRRGTPCEAPFATLLIQRTIT*EPLTAPPTASSSSAPILWSQK 142
Score = 28.6 bits (56), Expect(2) = 9e-032
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 878 VRVGRLVHPDVRLGH 834
VRVG LV DVRLGH
Sbjct: 657 VRVGGLVDADVRLGH 613
>gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07C05V 5', mRNA sequence
Length = 610
Score = 330 bits (716), Expect = 8e-090
Identities = 130/171 (76%), Positives = 143/171 (83%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G GRTVCVTGAGGFIASWLVKRLL+KGYTVRGTVRNPVDPKNDHLRA DG
Sbjct: 70 GHGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRA 249
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
P++L EAF+GC+G+FHAASPVTDDPE MIEPAIRGT+YV+ AA D G+KRVVFTS+
Sbjct: 250 DLMEPETLVEAFTGCEGIFHAASPVTDDPEKMIEPAIRGTKYVITAAADMGIKRVVFTST 429
Query: 525 IGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
IGTVYMNP+RDPSKPVDDTCWSDL+YCK T NW CYAKTVAEQ A E R+
Sbjct: 430 IGTVYMNPHRDPSKPVDDTCWSDLDYCKKTANWXCYAKTVAEQDALETGRQ 582
Score = 147 bits (316), Expect = 1e-034
Identities = 67/139 (48%), Positives = 86/139 (61%)
Frame = -1 / -2
Query: 596 EVAPAGVVHRLXXXXXXXXXXXXXXGREHDALHSGXXXXXXXXXXAPDRWLDHHLRVIGD 417
+VAPAGV+ L RE+ L + PDR LDH LRV+GD
Sbjct: 501 KVAPAGVIDGLAGVPVGVHVHRADGRRENHTLDAHVRGCSDHVLGPPDRRLDHLLRVVGD 322
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALL 237
G GVEDA+ AGEGL + W+ ++GAEEDE V GAVKG QV+VLWI+RV + A+ V LL
Sbjct: 321 GGSGVEDALAAGEGLDEGFWLHKIGAEEDEAVGGAVKGSQVIVLWINRVANGASHGVPLL 142
Query: 236 QEALDEPGGNEPSSSGHAN 180
+EALDEP G+E + +G A+
Sbjct: 141 EEALDEPRGDEAAGAGDAH 85
Score = 146 bits (314), Expect(2) = 6e-053
Identities = 71/101 (70%), Positives = 73/101 (72%)
Frame = -2 / -3
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAA 479
A CSATVLA*Q QF VFLQ SRSLQQVSSTGLLGS GFMYTVPM DV TTR P S+AA
Sbjct: 563 ASCSATVLA*QXQFAVFLQ*SRSLQQVSSTGLLGSLWGFMYTVPMVDVKTTRLMPMSAAA 384
Query: 478 AIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARLCG 356
IT VPR SVTGEAAWK PSQP KAS R+ G
Sbjct: 383 VITYLVPRIAGSIIFSGSSVTGEAAWKMPSQPVKASTRVSG 261
Score = 82.2 bits (173), Expect(2) = 6e-053
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
SFFGSTG TVPRTV PF RRRLTS EAM PPAPVT TVRP P
Sbjct: 197 SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPWP 69
Score = 50.1 bits (103), Expect(2) = 2e-011
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
R+H L+ARQAPP EG+H RH +PC SKE
Sbjct: 105 RLHRLVARQAPPPEGVHRARHRSQPC*SKE 194
Score = 44.1 bits (90), Expect = 0.002
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +1 / +2
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTHR 363
P S P GSSSAS RR T A TL IQRT T* PL W+ +
Sbjct: 95 PAPAASSPRGSSSASSRRGTPCEAPFATLLIQRTIT*EPLTAPPTASSSSAPILWSQK 268
Score = 42.3 bits (86), Expect(2) = 2e-011
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +2 / +3
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
EP PQQA HLLERP +LQ+ EL LLRQD
Sbjct: 447 EPPQGPQQARR*HLLERP*LLQKDSELXLLRQD 545
Score = 38.2 bits (77), Expect = 0.12
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3 / -1
Query: 606 CNTRGRSSRCRPQACWGHGRGS 541
C+++GRSSRC +ACWG GS
Sbjct: 511 CSSQGRSSRCHRRACWGPCGGS 446
>gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0022M03f, mRNA sequence
Length = 828
Score = 282 bits (610), Expect = 4e-075
Identities = 109/155 (70%), Positives = 125/155 (80%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G GRTVCVTGAGGFIASWLVKRLL+KGYTVRGTVRNPVDPKNDHLRA DG
Sbjct: 71 GHGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRA 250
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
P++L EAF+GC+G+FHAASPVTDDPE MIEPAIRGT+ V+ AA D G+KRVVFT +
Sbjct: 251 DLMEPETLVEAFTGCEGIFHAASPVTDDPEKMIEPAIRGTKCVITAAADMGIKRVVFTLT 430
Query: 525 IGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYC 629
IG +MNP+RDP +PVDD CWSDL+YC+ T +W C
Sbjct: 431 IGAGFMNPHRDPGEPVDDACWSDLDYCEKTGDWCC 535
Score = 135 bits (289), Expect(2) = 7e-032
Identities = 56/93 (60%), Positives = 71/93 (76%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
PDR LDH LRV+G G GVEDA+ AGEGL + W+ ++GAEEDE V GAVKG QV+VLWI
Sbjct: 364 PDRRLDHLLRVVGHGGSGVEDALAAGEGLDEGFWLHKIGAEEDEAVGGAVKGSQVIVLWI 185
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+RV + A+ V LL+EALDEP G+E + +G A+
Sbjct: 184 NRVANGASHGVPLLEEALDEPRGDEAAGAGDAH 86
Score = 105 bits (223), Expect(2) = 2e-040
Identities = 53/91 (58%), Positives = 57/91 (62%)
Frame = -2 / -1
Query: 628 QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPRXX 449
Q+Q VF Q SRSLQQ SSTG GS GFM PM +V TTR P S+AA IT VPR
Sbjct: 534 QHQSPVFSQ*SRSLQQASSTGSPGSLWGFMNPAPMVNVKTTRLMPMSAAAVITHLVPRIA 355
Query: 448 XXXXXXXXSVTGEAAWKTPSQPEKASARLCG 356
SVTGEAAWK PSQP KAS R+ G
Sbjct: 354 GSIIFSGSSVTGEAAWKMPSQPVKASTRVSG 262
Score = 82.2 bits (173), Expect(2) = 2e-040
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
SFFGSTG TVPRTV PF RRRLTS EAM PPAPVT TVRP P
Sbjct: 198 SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPWP 70
Score = 50.1 bits (103), Expect(2) = 3e-006
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
R+H L+ARQAPP EG+H RH +PC SKE
Sbjct: 106 RLHRLVARQAPPPEGVHRARHRSQPC*SKE 195
Score = 44.1 bits (90), Expect(2) = 0.001
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTHR 363
P S P GSSSAS RR T A TL IQRT T* PL W+ +
Sbjct: 96 PAPAASSPRGSSSASSRRGTPCEAPFATLLIQRTIT*EPLTAPPTASSSSAPILWSQK 269
Score = 24.9 bits (48), Expect(2) = 3e-006
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVL 628
EP P++A G LLERP +L + LVL
Sbjct: 448 EPPQGPRRARG*RLLERPGLL*KDRGLVL 534
Score = 23.1 bits (44), Expect(2) = 7e-032
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 596 EVAPAGVVHRL 564
+VAPAGV+H L
Sbjct: 502 QVAPAGVIHGL 470
Score = 21.7 bits (41), Expect(2) = 0.001
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1 / +3
Query: 571 WTTPAGAT 594
W TPAGAT
Sbjct: 477 WMTPAGAT 500
>gb|AL503986.1|AL503986 AL503986 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01C19V 5', mRNA sequence
Length = 614
Score = 251 bits (543), Expect(2) = 3e-071
Identities = 100/134 (74%), Positives = 112/134 (83%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G GRTVCVTGAGGFIASWLVKRLL+KGYTVRGTVRNPVDPKNDHLRA DG
Sbjct: 64 GHGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRA 243
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
P++L EAF+GC+G+FHAASPVTDDPE MIEPAIRGT+YV+ AA D G+KRVVFTS+
Sbjct: 244 DLMEPETLVEAFTGCEGIFHAASPVTDDPEKMIEPAIRGTKYVITAAADMGIKRVVFTST 423
Query: 525 IGTVYMNPYRDPSK 566
IGTVYMNP+RDP +
Sbjct: 424 IGTVYMNPHRDPKQ 465
Score = 138 bits (296), Expect(2) = 6e-033
Identities = 57/93 (61%), Positives = 72/93 (77%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
PDR LDH LRV+GD G GVEDA+ AGEGL + W+ ++GAEEDE V GAVKG QV+VLWI
Sbjct: 357 PDRRLDHLLRVVGDGGSGVEDALAAGEGLDEGFWLHKIGAEEDEAVGGAVKGSQVIVLWI 178
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+RV + A+ V LL+EALDEP G+E + +G A+
Sbjct: 177 NRVANGASHGVPLLEEALDEPRGDEAAGAGDAH 79
Score = 92.3 bits (195), Expect(3) = 3e-048
Identities = 43/69 (62%), Positives = 45/69 (65%)
Frame = -2 / -1
Query: 562 LGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQP 383
LGS GFMYTVPM DV TTR P S+AA IT VPR SVTGEAAWK PSQP
Sbjct: 461 LGSLWGFMYTVPMVDVKTTRLMPMSAAAVITYLVPRIAGSIIFSGSSVTGEAAWKMPSQP 282
Query: 382 EKASARLCG 356
KAS R+ G
Sbjct: 281 VKASTRVSG 255
Score = 82.2 bits (173), Expect(3) = 3e-048
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
SFFGSTG TVPRTV PF RRRLTS EAM PPAPVT TVRP P
Sbjct: 191 SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPWP 63
Score = 74.8 bits (157), Expect(2) = 5e-021
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +3 / +3
Query: 534 VYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
V+ P + P DTCWSDL+YCK T NWYCYAKTVAEQG
Sbjct: 435 VHEPPQGPQASPSMDTCWSDLDYCKKTANWYCYAKTVAEQG 557
Score = 57.4 bits (119), Expect(3) = 3e-048
Identities = 27/31 (87%), Positives = 27/31 (87%)
Frame = -2 / -2
Query: 655 PCSATVLA*QYQFWVFLQYSRSLQQVSSTGL 563
PCSATVLA*QYQF VFLQ SRSLQQVS GL
Sbjct: 556 PCSATVLA*QYQFAVFLQ*SRSLQQVSIDGL 464
Score = 50.1 bits (103), Expect(2) = 5e-021
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
R+H L+ARQAPP EG+H RH +PC SKE
Sbjct: 99 RLHRLVARQAPPPEGVHRARHRSQPC*SKE 188
Score = 44.1 bits (90), Expect = 0.002
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +1 / +2
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTHR 363
P S P GSSSAS RR T A TL IQRT T* PL W+ +
Sbjct: 89 PAPAASSPRGSSSASSRRGTPCEAPFATLLIQRTIT*EPLTAPPTASSSSAPILWSQK 262
Score = 38.6 bits (78), Expect(2) = 3e-071
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / +2
Query: 557 PQQACGRHLLERPRVLQEHPELVLLRQD 640
P + HLLERP +LQ+ ELVLLRQD
Sbjct: 458 PSKPVDGHLLERP*LLQKDSELVLLRQD 541
Score = 23.5 bits (45), Expect(2) = 6e-033
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 606 CNTRGRSSRC 577
C+++GRSSRC
Sbjct: 507 CSSQGRSSRC 478
>gb|BM375203.2|BM375203 EBem06_SQ002_K13_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ002_K13 5', mRNA sequence
Length = 546
Score = 121 bits (259), Expect(4) = 2e-067
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +3 / +2
Query: 882 RYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
RY+CAE TLHRG+LCR+LA LFPEYP+PT+CKD+VNPP GYK+TNQ LKDL M F PV
Sbjct: 326 RYVCAERTLHRGELCRILAGLFPEYPIPTRCKDEVNPPKKGYKYTNQPLKDLSMKFTPV 502
Score = 103 bits (220), Expect(2) = 5e-039
Identities = 54/106 (50%), Positives = 58/106 (54%)
Frame = -2 / -1
Query: 883 RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXXXXXXX 704
RP A GA T TCASA SLTCT AC + T +A PVRY VL F +GC
Sbjct: 324 RPPALGAWSTLTCASAASLTCT*ACDSLTYALASPVRYLSMCLVLVFILGCSSSPSVTTG 145
Query: 703 XXXXXXXXXXXXXSHAPCSATVLA*QYQFWVFLQYSRSLQQVSSTG 566
SHAP SA VLA*QYQF V LQ SRSLQ SS+G
Sbjct: 144 ITTARSSPSDRAASHAPRSAIVLA*QYQFLVCLQ*SRSLQHESSSG 7
Score = 90.0 bits (190), Expect(4) = 2e-067
Identities = 29/39 (74%), Positives = 35/39 (89%)
Frame = +3 / +2
Query: 567 PVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
P+DD+CWSDL+YCK T+NWYCYAKT+AE+GAWE AR G
Sbjct: 8 PLDDSCWSDLDYCKQTKNWYCYAKTIAERGAWEAARSLG 124
Score = 80.3 bits (169), Expect(4) = 2e-067
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGR 884
N ST H++KYLTG A YVN + AYVHV+D AEAHVRV +AP+A GR
Sbjct: 185 NTSTKHILKYLTGEAKAYVNESHAYVHVKDAAEAHVRVLQAPNAGGR 325
Score = 78.5 bits (165), Expect(2) = 5e-039
Identities = 38/59 (64%), Positives = 39/59 (66%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*R 881
TG + RSL W V L P GG T SLHLVG GYSGK AR RQ SPRC VLSAQ *R
Sbjct: 501 TGVNFMLRSLRGWFVYL*PFFGGFTSSLHLVGMGYSGKRPARIRQSSPRCSVLSAQT*R 325
Score = 72.5 bits (152), Expect(2) = 4e-015
Identities = 37/59 (62%), Positives = 43/59 (72%)
Frame = -1 / -3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAA 879
R E+H +LE LV LV+ R++LVLA G GVLREE GED AE+AAVQ LGADVAA
Sbjct: 499 RGELHA*VLERLVRVLVTLLWRIHLVLASCGNGVLREEAGEDPAELAAVQRPLGADVAA 323
Score = 39.1 bits (79), Expect(3) = 2e-007
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +2 / +1
Query: 560 QQACGRHLLERPRVLQEHPELVLLRQD 640
++A R +LERPR+LQ + ELVLLRQD
Sbjct: 1 RRAARRLVLERPRLLQANQELVLLRQD 81
Score = 35.9 bits (72), Expect(3) = 2e-007
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 950 GVPRTHQVQGPG*PSGGRIQVHQPEAQG 1033
GVP +H++QG G + +QVH+P +QG
Sbjct: 394 GVPHSHKMQGRGESAKEGLQVHEPASQG 477
Score = 29.5 bits (58), Expect(2) = 4e-015
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -3
Query: 884 AAVRVGRLVHPDVRLG 837
A+ VGRL HPDVRLG
Sbjct: 325 ASPGVGRLEHPDVRLG 278
Score = 22.6 bits (43), Expect(4) = 2e-067
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 1067 LYETVTSLQEK 1099
LYE V SLQEK
Sbjct: 512 LYEAVNSLQEK 544
Score = 21.7 bits (41), Expect(3) = 2e-007
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / +3
Query: 838 PRRTSGC 858
PRRTSGC
Sbjct: 279 PRRTSGC 299
>gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. vulgare cDNA clone HM12I01
5-PRIME, mRNA sequence
Length = 482
Score = 238 bits (515), Expect = 4e-062
Identities = 96/157 (61%), Positives = 111/157 (70%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R DPKN HL ALDG
Sbjct: 11 VCVTGAGGFIGSWIVKLLLARGYAVRGTSRRADDPKNAHLWALDGAAERLTMVQVDLLDR 190
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVY 539
SL AF GCDGV H ASP+ D PE +IEP I GT V+ A AGV+RVV +S+IGT+Y
Sbjct: 191 ASLRAAFHGCDGVIHTASPMHDTPEEIIEPVITGTLNVVEMAAGAGVRRVVLSSTIGTMY 370
Query: 540 MNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAE 650
MNP+RDP P+DD+CWSDL+YCK T+NWYCYAKT+AE
Sbjct: 371 MNPHRDPDAPLDDSCWSDLDYCKQTKNWYCYAKTIAE 481
Score = 150 bits (323), Expect = 1e-035
Identities = 79/157 (50%), Positives = 89/157 (56%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VLA*QYQF V LQ SRSLQ SS+G GSR GFMY VPM + +TTR TPA +A + T
Sbjct: 480 SAIVLA*QYQFLVCLQ*SRSLQHESSSGASGSRWGFMYMVPMVEDSTTRRTPAPAAISTT 301
Query: 469 *RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXXXRWS 290
VP S G+A W TPSQP KA+ RL R +
Sbjct: 300 LSVPVITGSMISSGVSCIGDAVWMTPSQPWKAARRLARSSRSTCTMVSRSAAPSSAHRCA 121
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
F GS+ VPRT *P +RR LT QE M PPAPVTQT
Sbjct: 120 FLGSSARREVPRTA*PRARRSLTIQEPMKPPAPVTQT 10
Score = 68.0 bits (142), Expect = 1e-010
Identities = 42/112 (37%), Positives = 55/112 (49%)
Frame = -1 / -2
Query: 515 EHDALHSGXXXXXXXXXXAPDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAE 336
+H A G D LD L + RG GV+DAV A EG +A V+QV
Sbjct: 346 QHHAPDPGAGGHLHDVERPRDHRLDDLLGRVVHRGCGVDDAVAAVEGGAEAGPVEQVDLH 167
Query: 335 EDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
E + AV+ PQV VL + AD VA +E LD+PG NE + +G A+
Sbjct: 166 HGEPLRRAVERPQVRVLGVICAAGGTADGVAAGEEELDDPGANEAAGAGDAD 11
Score = 47.8 bits (98), Expect(2) = 4e-007
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
EP P P++A R +LERPR+LQ + ELVLLRQD
Sbjct: 373 EPPPRPRRAARRLVLERPRLLQANQELVLLRQD 471
Score = 29.5 bits (58), Expect(2) = 4e-007
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
R+H LL RQAPP L PR+
Sbjct: 31 RLHWLLDRQAPPRPRLRRPRY 93
>gb|BG310404.1|BG310404 HVSMEc0018H08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018H08f, mRNA sequence
Length = 832
Score = 234 bits (505), Expect = 1e-060
Identities = 98/168 (58%), Positives = 113/168 (67%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK +GY VRGT R DPKN HL ALDG
Sbjct: 122 VCVTGAGGFIGSWIVKLGGGRGYAVRGTSRRADDPKNAHLWALDGAAERLTMVQVDLLDR 301
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVY 539
SL AF GCDGV H ASP+ D PE +IEP I GT V+ A AGV+RVV +S+IGT+Y
Sbjct: 302 ASLRAAFHGCDGVIHTASPMHDTPEEIIEPVITGTLNVVEMAAGAGVRRVVLSSTIGTMY 481
Query: 540 MNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
MNP+RDP P+DD+CWSDL YCK T+NWYCYAKT+AE+G E A G
Sbjct: 482 MNPHRDPDAPLDDSCWSDLCYCKQTKNWYCYAKTIAERGP*EAAPSLG 625
Score = 146 bits (314), Expect = 2e-034
Identities = 78/161 (48%), Positives = 87/161 (54%)
Frame = -2 / -2
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
H P SA VLA*QYQF V LQ RSLQ SS+G GSR GFMY VPM + +TTR TPA +A
Sbjct: 603 HGPRSAIVLA*QYQFLVCLQ*HRSLQHESSSGASGSRWGFMYMVPMVEDSTTRRTPAPAA 424
Query: 481 AAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARLCGXXXXXXXXXXXXXXXXXX 302
+ T VP S G+A W TPSQP KA+ RL
Sbjct: 423 ISTTLSVPVITGSMISSGVSCIGDAVWMTPSQPWKAARRLARSSRSTCTMVSRSAAPSSA 244
Query: 301 XRWSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
R +F GS+ VPRT *P LT QE M PPAPVTQT
Sbjct: 243 HRCAFLGSSARREVPRTA*PRPPPSLTIQEPMKPPAPVTQT 121
Score = 67.0 bits (140), Expect = 2e-010
Identities = 42/112 (37%), Positives = 54/112 (48%)
Frame = -1 / -1
Query: 515 EHDALHSGXXXXXXXXXXAPDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAE 336
+H A G D LD L + RG GV+DAV A EG +A V+QV
Sbjct: 457 QHHAPDPGAGGHLHDVERPRDHRLDDLLGRVVHRGCGVDDAVAAVEGGAEAGPVEQVDLH 278
Query: 335 EDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
E + AV+ PQV VL + AAD VA LD+PG NE + +G A+
Sbjct: 277 HGEPLRRAVERPQVRVLGVICAAGGAADGVAAAAPQLDDPGANEAAGAGDAD 122
Score = 44.1 bits (90), Expect(2) = 3e-005
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2 / +1
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
EP P P++A R +LERP +LQ + ELVLLRQD
Sbjct: 484 EPPPRPRRAARRLVLERPVLLQANQELVLLRQD 582
Score = 27.6 bits (54), Expect(2) = 3e-005
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*G 303
P SL PGSSS AT SAA RT T G
Sbjct: 132 PAPAASLAPGSSSWGAAAATPSAAPPAAQMTPRTRTCG 245
>gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_J04 5', mRNA sequence
Length = 598
Score = 173 bits (372), Expect(2) = 9e-060
Identities = 71/114 (62%), Positives = 81/114 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 128 GHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 307
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKR 506
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA DAG R
Sbjct: 308 DLLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVR 469
Score = 90.0 bits (190), Expect = 3e-017
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -1 / -1
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GD GGGVE AV A +G + V++VG ED+ + GAV+ QV +L +
Sbjct: 421 PHRRLHHLLRVVGDGGGGVEHAVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRV 242
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A D VA LQE LDEP + P +G A+
Sbjct: 241 IWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAH 143
Score = 78.5 bits (165), Expect(2) = 9e-060
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = +3 / +3
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYC 629
VVFTSSIG V M+P R P VD++CWSDLE+CK T+NWYC
Sbjct: 474 VVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYC 596
Score = 73.9 bits (155), Expect(3) = 6e-034
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR LTS +AM P APVT TV PCP
Sbjct: 255 AFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCPCP 127
Score = 62.5 bits (130), Expect(3) = 6e-034
Identities = 30/42 (71%), Positives = 31/42 (73%)
Frame = -2 / -1
Query: 631 *QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTT 506
*QYQF VFLQ SRSLQQ SST G R G M T PM+DVNTT
Sbjct: 598 *QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMDDVNTT 473
Score = 46.9 bits (96), Expect(3) = 6e-034
Identities = 22/45 (48%), Positives = 25/45 (55%)
Frame = -2 / -2
Query: 505 RFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
R PAS+AA+IT VP SVTGEA W TP QP A+
Sbjct: 468 RTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAA 334
Score = 42.8 bits (87), Expect(2) = 1e-005
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++ARQA PGEGLH H +EP
Sbjct: 163 RVHRVVARQAAPGEGLHRQGHSEEP 237
Score = 33.6 bits (67), Expect = 2.8
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSSS SWR AT S A+ GT +R T*
Sbjct: 153 PAPPGTSRRGSSSCSWRGATPSRAQ*GTQMTRRMHT* 263
Score = 29.5 bits (58), Expect(2) = 1e-005
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLL 631
P P ++ R LLER VLQE+ ELVLL
Sbjct: 512 PQPRARRGRRRVLLERS*VLQENQELVLL 598
>gb|BI958620.1|BI958620 HVSMEn0015P02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015P02f, mRNA sequence
Length = 643
Score = 169 bits (363), Expect(3) = 1e-057
Identities = 67/90 (74%), Positives = 72/90 (80%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G GRTVCVTGAGGFIASWLVKRLL+KGYTVRGTVRNPVDPKNDHLRA DG
Sbjct: 213 GHGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRA 392
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPE 434
P++L EAF+GC G+FHAASPVTDDPE
Sbjct: 393 DLMEPETLVEAFTGCKGIFHAASPVTDDPE 482
Score = 121 bits (259), Expect(2) = 1e-033
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = -1 / -3
Query: 434 LRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAA 255
LRV+G G GVEDA+ AGEGL + W+ ++GAEEDE V GAVKG QV+VLWI+RV + A+
Sbjct: 482 LRVVGHGGSGVEDALAAGEGLDEGFWLHKIGAEEDEAVGGAVKGSQVIVLWINRVANGAS 303
Query: 254 DCVALLQEALDEPGGNEPSSSGHAN 180
V LL+EALDEP G+E + +G A+
Sbjct: 302 HGVPLLEEALDEPRGDEAAGAGDAH 228
Score = 82.2 bits (173), Expect(2) = 3e-021
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
SFFGSTG TVPRTV PF RRRLTS EAM PPAPVT TVRP P
Sbjct: 340 SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPWP 212
Score = 70.3 bits (147), Expect(3) = 1e-057
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 441 IEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPV 572
IEPAIRGT+YV+ AA D +KR+V TS++GT YMN +RDP PV
Sbjct: 488 IEPAIRGTKYVITAAXDMXIKRLVCTSNMGTGYMNAHRDPGXPV 619
Score = 50.1 bits (103), Expect = 3e-005
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
R+H L+ARQAPP EG+H RH +PC SKE
Sbjct: 248 RLHRLVARQAPPPEGVHRARHRSQPC*SKE 337
Score = 44.1 bits (90), Expect = 0.002
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +1 / +1
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTHR 363
P S P GSSSAS RR T A TL IQRT T* PL W+ +
Sbjct: 238 PAPAASSPRGSSSASSRRGTPCEAPFATLLIQRTIT*EPLTAPPTASSSSAPILWSQK 411
Score = 42.8 bits (87), Expect(2) = 1e-033
Identities = 22/39 (56%), Positives = 22/39 (56%)
Frame = -2 / -2
Query: 571 TGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPR 455
TG GS FMY VPM DV T R S AA IT VPR
Sbjct: 618 TGXPGSLWAFMYPVPMLDVQTKRLMXMSXAAVITYLVPR 502
Score = 40.5 bits (82), Expect(2) = 3e-021
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASARLCG 356
VTGEAAWK P QP KAS R+ G
Sbjct: 469 VTGEAAWKMPLQPVKASTRVSG 404
Score = 24.0 bits (46), Expect(3) = 1e-057
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3 / +1
Query: 558 PSKPVDDTCWSD 593
P P DTCWS+
Sbjct: 604 PRXPRQDTCWSE 639
>gb|BI950770.1|BI950770 HVSMEl0023C06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0023C06f, mRNA sequence
Length = 994
Score = 205 bits (442), Expect(2) = 2e-055
Identities = 83/116 (71%), Positives = 92/116 (79%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G GRTVCVTGAGGFIASWLVKRLL+KGYTVRGTVRNPVDPKNDHLRA DG
Sbjct: 213 GHGRTVCVTGAGGFIASWLVKRLLQKGYTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRA 392
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVV 512
P++L EAF+GC+G+FHAA PVTDDPE MIEPAI GT+YV+ AA D G+KR V
Sbjct: 393 DLMEPETLVEAFTGCEGIFHAAFPVTDDPEKMIEPAIPGTKYVITAAADMGIKRGV 560
Score = 129 bits (277), Expect = 3e-029
Identities = 54/92 (58%), Positives = 70/92 (76%)
Frame = -1 / -3
Query: 455 DRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIH 276
DR LDH LRV+GD GVEDA+ AGEGL + W+ ++GAEE+E V GAVKG QV+VLWI+
Sbjct: 503 DRGLDHLLRVVGDGESGVEDALAAGEGLDEGFWLHKIGAEENEAVGGAVKGSQVIVLWIN 324
Query: 275 RVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
RV + A+ V LL+EALDEP G+E + +G A+
Sbjct: 323 RVANGASHGVPLLEEALDEPRGDEAAGAGDAH 228
Score = 82.2 bits (173), Expect(2) = 7e-026
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
SFFGSTG TVPRTV PF RRRLTS EAM PPAPVT TVRP P
Sbjct: 340 SFFGSTGLRTVPRTVYPFWRRRLTSHEAMKPPAPVTHTVRPWP 212
Score = 56.1 bits (116), Expect(2) = 7e-026
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARLCG 356
T R P S+AA IT VP SVTG+AAWK PSQP KAS R+ G
Sbjct: 559 TPRLMPMSAAAVITYFVPGIAGSIIFSGSSVTGKAAWKMPSQPVKASTRVSG 404
Score = 50.1 bits (103), Expect(2) = 1e-007
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEPCGSKE 289
R+H L+ARQAPP EG+H RH +PC SKE
Sbjct: 248 RLHRLVARQAPPPEGVHRARHRSQPC*SKE 337
Score = 43.7 bits (89), Expect = 0.003
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = +1 / +1
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*GPLXXXXXXXXXXXXXCWTHR 363
P S P GSSSAS RR T A TL IQRT T* PL W+ +
Sbjct: 238 PAPAASSPRGSSSASSRRGTPCEAPFATLLIQRTIT*EPLTAPPTASFSSAPILWSQK 411
Score = 32.2 bits (64), Expect(2) = 2e-055
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 543 NPYRDPSKPVDDTCWSDLEYCKNTQ 617
+P+R+PS+PVDDT + L K ++
Sbjct: 589 DPHRNPSRPVDDTAGATLTTAKESE 663
Score = 30.4 bits (60), Expect(2) = 1e-007
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3 / +3
Query: 546 PYRDPSKPVDDTCWSDLEYCK 608
P ++P + CWSDL+YCK
Sbjct: 591 PPQEPKQAGR*HCWSDLDYCK 653
>gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0015E11f,
mRNA sequence
Length = 620
Score = 163 bits (350), Expect(2) = 4e-053
Identities = 65/105 (61%), Positives = 77/105 (73%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS H++KYL GSA Y NA QAYV VRDVA AH+RV+EAP A GRY+CAE LHR D+
Sbjct: 154 NASAAHILKYLDGSARKYANAVQAYVDVRDVAGAHLRVFEAPQASGRYLCAERVLHRQDV 333
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+L+KLFP YPVPT+C D VNPP YK +N L+DLG+ F V
Sbjct: 334 FHILSKLFP*YPVPTRCSDDVNPPKHPYKMSNSNLQDLGLKFTSV 468
Score = 155 bits (333), Expect = 6e-037
Identities = 80/149 (53%), Positives = 84/149 (56%)
Frame = -2 / -1
Query: 1039 PRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGAS 860
PRS L L L GG T S HLVGTGY GKSL R + S RCR SAQ *RP AWGAS
Sbjct: 449 PRSCRLELDIL*GCFGGFTSSEHLVGTGY*GKSLERMWKTSWRCRTRSAQR*RPEAWGAS 270
Query: 859 YTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXXXXXXXXXXXXXXX 680
TR CA ATS T TYAC A +A+P RY + LAFTVGC
Sbjct: 269 KTRRCAPATSRTSTYACTALAYFLAEPSRYLRMCAALAFTVGCSSGPTTSTGFTTTRSTP 90
Query: 679 XXXXXSHAPCSATVLA*QYQFWVFLQYSR 593
SHA CSAT L *QYQF VFLQ SR
Sbjct: 89 RALAFSHAACSATALP*QYQFLVFLQNSR 3
Score = 73.5 bits (154), Expect = 3e-012
Identities = 39/73 (53%), Positives = 48/73 (65%)
Frame = -1 / -3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ +IL+ VG LV R V++V A GVL EELGED +V AVQ ALGA+VAA
Sbjct: 465 RSELEAKILQIRVGHLVRMLRWVHIVRAPCWDGVLGEELGEDVEDVLAVQDALGAEVAAG 286
Query: 875 RVGRLVHPDVRLG 837
+GRL P+VR G
Sbjct: 285 GLGRLEDPEVRAG 247
Score = 66.1 bits (138), Expect(2) = 4e-053
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +3 / +1
Query: 591 DLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
DLE+CK T+NWYCY K VAEQ AWE AR RG
Sbjct: 1 DLEFCKKTKNWYCYGKAVAEQAAWEKARARG 93
>gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_M20 5', mRNA sequence
Length = 626
Score = 100 bits (212), Expect(3) = 7e-052
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +3 / +1
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCY 632
+ AAAD ++RVV TSSIG VYM+P R P + D+TCWSDLE+CKNT+NWYCY
Sbjct: 463 INAAADVGSIRRVVMTSSIGAVYMDPRRSPDEEADETCWSDLEFCKNTKNWYCY 624
Score = 85.8 bits (181), Expect(3) = 7e-052
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+++G+GRTVCVTGAGGFIASWLVK LLEKGY V GTVRNP D
Sbjct: 141 VATGRGRTVCVTGAGGFIASWLVKLLLEKGYAVHGTVRNPDD 266
Score = 69.3 bits (145), Expect(3) = 5e-030
Identities = 34/54 (62%), Positives = 39/54 (72%)
Frame = -2 / -1
Query: 634 A*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAI 473
A*QYQF+VFLQ SRSLQ VSS G R G MYT P++DV TTR +SAAA+
Sbjct: 626 A*QYQFFVFLQNSRSLQHVSSASSSGLRRGSMYTAPIDDVITTRRMLPTSAAAL 465
Score = 68.4 bits (143), Expect(3) = 5e-030
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -2 / -2
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
S+GF TVP T *PFSRR LTS +AM PPAPVT TVRP P
Sbjct: 265 SSGFRTVPWTA*PFSRRSLTSHDAMKPPAPVTHTVRPRP 149
Score = 57.9 bits (120), Expect(3) = 7e-052
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDPE 434
+N HL+ L+G +SL AF GC GVFH A PVTDDPE
Sbjct: 273 RNAHLKGLEGAAERLTLFRVDLLDKESLVAAFRGCQGVFHTACPVTDDPE 422
Score = 41.8 bits (85), Expect(3) = 2e-012
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 551 P*PQQACGRHLLERPRVLQEHPELVLL 631
P P++ R +LERPRVLQEH ELVLL
Sbjct: 543 PQPRRGGRRDMLERPRVLQEHKELVLL 623
Score = 40.0 bits (81), Expect(3) = 2e-012
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQE 271
R+H ++A QAPPGEGL PRH E
Sbjct: 185 RLHRVMAGQAPPGEGLRRPRHRPE 256
Score = 38.6 bits (78), Expect(3) = 7e-007
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
I R+PD A D VALLQE LD+P +E + + H +
Sbjct: 266 IIRIPDGAVDGVALLQEELDQP*RDEAAGACHTH 165
Score = 33.1 bits (66), Expect(3) = 2e-012
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
MIEPA+ GTR V+ AA D G R V +S
Sbjct: 427 MIEPAVSGTRNVINAAADVGSIRRVVMTS 513
Score = 32.2 bits (64), Expect(3) = 5e-030
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -1 / -1
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDE 327
R+IGD G+E A+ + E +AL VQQV EE +
Sbjct: 419 RIIGDGTCGMEYALASSECSDEALLVQQVHPEEGQ 315
Score = 32.2 bits (64), Expect = 7.2
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 217 GSSSASWRRATQSAARSGTL 276
G SS+SWRRAT S A SG L
Sbjct: 202 GWSSSSWRRATPSTAPSGIL 261
Score = 30.4 bits (60), Expect(3) = 7e-007
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 421 VTGEAAWKTPSQPEKASARL 362
VTG A W TP P A+ RL
Sbjct: 409 VTGHAVWNTPWHPRNAATRL 350
Score = 26.3 bits (51), Expect(3) = 7e-007
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 612 CSCNTRGRSSRCR 574
CSC TRGRS+ R
Sbjct: 604 CSCRTRGRSNMSR 566
>gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020B01f, mRNA sequence
Length = 893
Score = 174 bits (375), Expect(3) = 2e-049
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 128 GHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 307
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA DAG R V +S
Sbjct: 308 DLLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTS 487
Score = 108 bits (231), Expect(2) = 9e-029
Identities = 42/66 (63%), Positives = 49/66 (74%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AAAD V+RVVFTSSIG V M+P R P VD++CWSDLE+CK T+NWYCY VA+
Sbjct: 443 AAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKITKNWYCYCNAVADHA 622
Query: 657 AWEVAR 674
AWE AR
Sbjct: 623 AWEKAR 640
Score = 90.0 bits (190), Expect(2) = 2e-034
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -1 / -2
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GD GGGVE AV A +G + V++VG ED+ + GAV+ QV +L +
Sbjct: 421 PHRRLHHLLRVVGDGGGGVEHAVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRV 242
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A D VA LQE LDEP + P +G A+
Sbjct: 241 IWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAH 143
Score = 76.7 bits (161), Expect(2) = 2e-034
Identities = 39/58 (67%), Positives = 41/58 (70%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAA 476
SAT L *QYQF V LQ SRSLQQ SST G R G M T PM+DVNTTR T +SAAA
Sbjct: 615 SATALQ*QYQFLVILQNSRSLQQDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAA 442
Score = 73.9 bits (155), Expect(2) = 3e-021
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR LTS +AM P APVT TV PCP
Sbjct: 255 AFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCPCP 127
Score = 48.7 bits (100), Expect(2) = 3e-021
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -2 / -3
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R PAS+AA+IT VP SVTGEA W TP QP A+
Sbjct: 474 TRRTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAA 334
Score = 42.8 bits (87), Expect(2) = 9e-029
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++ARQA PGEGLH H +EP
Sbjct: 163 RVHRVVARQAAPGEGLHRQGHSEEP 237
Score = 37.3 bits (75), Expect(3) = 2e-049
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3 / +3
Query: 801 NAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
+A QA++ +RD+A H+RV+ P A G C + L DL
Sbjct: 765 HAVQAFLDLRDIAGTHLRVFRGPKALGVTFCDKRVLVL*DL 887
Score = 33.6 bits (67), Expect = 2.8
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSSS SWR AT S A+ GT +R T*
Sbjct: 153 PAPPGTSRRGSSSCSWRGATPSRAQ*GTQMTRRMHT* 263
Score = 29.5 bits (58), Expect(3) = 2e-049
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2 / +1
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQ 637
P P ++ R LLER +LQ++ ELVLL Q
Sbjct: 511 PQPRARRGRRRVLLERS*ILQDYQELVLLLQ 603
>gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007G08f, mRNA sequence
Length = 819
Score = 169 bits (364), Expect(2) = 7e-048
Identities = 72/122 (59%), Positives = 84/122 (68%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXX 338
++G G+TVCVTGAGG+I SW+VK LLEKGY VRGTVRNP D KN HLRAL G
Sbjct: 49 ATGDGQTVCVTGAGGYIGSWIVKLLLEKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLC 228
Query: 339 XXXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFT 518
+L A +GC GVFH ASPVTDDPE M+EPA+RGTRYV+ AA +G R V
Sbjct: 229 KADLLDGDALRAAIAGCHGVFHTASPVTDDPEEMVEPAVRGTRYVIDAAAQSGTVRRVVL 408
Query: 519 SS 524
+S
Sbjct: 409 TS 414
Score = 103 bits (219), Expect(2) = 6e-026
Identities = 40/63 (63%), Positives = 48/63 (76%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AAA V+RVV TSSIG V M+P RDP VD++CWS+LE+CK T+NWYCY KTVAE+
Sbjct: 370 AAAQSGTVRRVVLTSSIGAVAMDPSRDPDAVVDESCWSNLEFCKKTKNWYCYGKTVAERE 549
Query: 657 AWE 665
A E
Sbjct: 550 ALE 558
Score = 92.7 bits (196), Expect(2) = 6e-034
Identities = 44/93 (47%), Positives = 61/93 (65%)
Frame = -1 / -1
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GDR GGVEDAV AG+G + + V+QVG + + + A + PQV VL +
Sbjct: 348 PHRRLHHLLRVVGDRRGGVEDAVAAGDGGAQRVAVEQVGLAQHQPLRRAGESPQVRVLRV 169
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A+ V LLQ+ LD+P + + +GHA+
Sbjct: 168 IWVPDGASHGVPLLQQELDDPRPDVAAGAGHAH 70
Score = 72.5 bits (152), Expect(2) = 6e-034
Identities = 38/58 (65%), Positives = 40/58 (68%)
Frame = -2 / -2
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAA 476
SATV *QYQF VFLQ SR LQQ SST GSR G M T PM+DV+TTR T AAA
Sbjct: 542 SATVFP*QYQFLVFLQNSRLLQQDSSTTASGSRLGSMATAPMDDVSTTRRTVPDWAAA 369
Score = 68.4 bits (143), Expect(3) = 4e-022
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FF S+GFLTVPRT PFS R LT Q+ M PPAPVT TV P P
Sbjct: 182 AFFASSGFLTVPRTAYPFSSRSLTIQDPM*PPAPVTHTVCPSP 54
Score = 49.2 bits (101), Expect(3) = 4e-022
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = -2 / -2
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R P +AA++T*RVP SVTGEA WKTP QP A+
Sbjct: 401 TRRTVPDWAAASMT*RVPLTAGSTISSGSSVTGEAVWKTPWQPAMAA 261
Score = 42.3 bits (86), Expect(2) = 7e-048
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +2 / +3
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
P P P + R LLE+PRVLQE ELVLLR+D
Sbjct: 438 PQPRPGRRRRRVLLEQPRVLQEDQELVLLRED 533
Score = 38.6 bits (78), Expect(2) = 6e-026
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H +L RQAP GEG+ RH QEP
Sbjct: 90 RLHRVLDRQAPAGEGVRRARHRQEP 164
Score = 38.2 bits (77), Expect = 0.12
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +1 / +2
Query: 184 A*PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*G 303
A*P + GSSS+ WRR T A SGT +RT T*G
Sbjct: 74 A*PAPAATSGLGSSSSCWRRGTPCEAPSGTQMTRRTRT*G 193
Score = 25.4 bits (49), Expect(3) = 4e-022
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCRPQACWGHGRG 544
SC TRG SSR R + G G G
Sbjct: 502 SCRTRGCSSRTRRRRRPGRGWG 437
>gb|AV925423.1|AV925423 AV925423 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24c05 5', mRNA sequence
Length = 567
Score = 189 bits (407), Expect = 4e-047
Identities = 82/162 (50%), Positives = 104/162 (64%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN +L L+G
Sbjct: 81 VCVTGAGGFIGSWVVKVLLLRGYRVRGTARDPADNKNSYLLDLEGAKERLSVCRADLLDR 260
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVY 539
+L F GC+GVFH ASP+ + ++ A+ GTR V+ AA DAGV+RVVFTSS G V+
Sbjct: 261 DNLNGVFRGCNGVFHIASPMFNTDPELMVVAVEGTRNVIHAAADAGVRRVVFTSSYGAVH 440
Query: 540 MNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWE 665
M+P R+ +D+TCWSD E+CK T N YC +K +AE A E
Sbjct: 441 MDPNRNLDAVLDETCWSDYEFCKQTGNMYCCSKMMAEITATE 566
Score = 71.2 bits (149), Expect(2) = 1e-018
Identities = 45/99 (45%), Positives = 49/99 (49%)
Frame = -2 / -3
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAA 479
A SA + QY V LQ S SLQ VSS+ R G M T P E+VNTTR TPAS+AA
Sbjct: 559 AVISAIIFEQQYILPVCLQNS*SLQHVSSSTASRFRLGSMCTAP*EEVNTTRRTPASAAA 380
Query: 478 AIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARL 362
IT VP GEA KTP P RL
Sbjct: 379 WITFLVPSTATTMSSGSVLNIGEAI*KTPLHPLNTPLRL 263
Score = 47.8 bits (98), Expect = 1e-004
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = -1 / -2
Query: 413 GGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQ 234
GG ++DAV + + K + VQ+VGA + +++ QV VL I R+ + + +A +
Sbjct: 314 GGDMKDAVASSKHPVKVVTVQEVGAAHG*PLLCSLQVKQVGVLVIRRISGSSPNTIATEE 135
Query: 233 EALDEPGGNEPSSSGHAN 180
E L P N+ S +GH N
Sbjct: 134 EHLHHP*TNKTSCTGHTN 81
Score = 42.8 bits (87), Expect(2) = 1e-018
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
F S G L VP T *P R T+ E + PPAPVTQT
Sbjct: 190 FLLSAGSLAVPLTR*PRRRSTFTTHEPIKPPAPVTQT 80
>gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013G15f, mRNA sequence
Length = 655
Score = 174 bits (375), Expect(2) = 5e-047
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 131 GHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 310
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA DAG R V +S
Sbjct: 311 DLLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTS 490
Score = 109 bits (232), Expect(2) = 5e-029
Identities = 41/62 (66%), Positives = 48/62 (77%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AAAD V+RVVFTSSIG V M+P R P VD++CWSDLE+CK T+NWYCY K VA+Q
Sbjct: 446 AAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYCYGKAVADQA 625
Query: 657 AW 662
AW
Sbjct: 626 AW 631
Score = 90.0 bits (190), Expect(2) = 4e-035
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -1 / -1
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GD GGGVE AV A +G + V++VG ED+ + GAV+ QV +L +
Sbjct: 424 PHRRLHHLLRVVGDGGGGVEHAVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRV 245
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A D VA LQE LDEP + P +G A+
Sbjct: 244 IWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAH 146
Score = 79.4 bits (167), Expect(2) = 4e-035
Identities = 41/61 (67%), Positives = 42/61 (68%)
Frame = -2 / -2
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAA 479
A SAT *QYQF VFLQ SRSLQQ SST G R G M T PMEDVNTTR T +SAA
Sbjct: 627 AAWSATAFP*QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMEDVNTTRRTVPASAA 448
Query: 478 A 476
A
Sbjct: 447 A 445
Score = 73.9 bits (155), Expect(3) = 3e-023
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR LTS +AM P APVT TV PCP
Sbjct: 258 AFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCPCP 130
Score = 48.7 bits (100), Expect(3) = 3e-023
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -2 / -2
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R PAS+AA+IT VP SVTGEA W TP QP A+
Sbjct: 477 TRRTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAA 337
Score = 42.8 bits (87), Expect(2) = 5e-029
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++ARQA PGEGLH H +EP
Sbjct: 166 RVHRVVARQAAPGEGLHRQGHSEEP 240
Score = 34.5 bits (69), Expect(2) = 5e-047
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQ 637
P P P++ R LLER VLQE+ +LVLLR+
Sbjct: 514 PQPRPRRGRRRVLLERS*VLQENQKLVLLRE 606
Score = 33.6 bits (67), Expect = 2.8
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSSS SWR AT S A+ GT +R T*
Sbjct: 156 PAPPGTSRRGSSSCSWRGATPSRAQ*GTQMTRRMHT* 266
Score = 24.4 bits (47), Expect(3) = 3e-023
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCRPQACWGHGRG 544
SC T+ RSSR R + G G G
Sbjct: 578 SCRTQDRSSRTRRRPRRGRGWG 513
>gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007N17f, mRNA sequence
Length = 796
Score = 174 bits (375), Expect(2) = 6e-047
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 132 GHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 311
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA DAG R V +S
Sbjct: 312 DLLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTS 491
Score = 120 bits (257), Expect(2) = 2e-032
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AAAD V+RVVFTSSIG V M+P R P VD++CWSDLE+CK T+NWYCY K VAEQ
Sbjct: 447 AAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYCYGKAVAEQA 626
Query: 657 AWEVARKRG 683
AWE AR RG
Sbjct: 627 AWEKARARG 653
Score = 90.0 bits (190), Expect(2) = 7e-038
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GD GGGVE AV A +G + V++VG ED+ + GAV+ QV +L +
Sbjct: 425 PHRRLHHLLRVVGDGGGGVEHAVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRV 246
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A D VA LQE LDEP + P +G A+
Sbjct: 245 IWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAH 147
Score = 88.6 bits (187), Expect(2) = 7e-038
Identities = 43/62 (69%), Positives = 45/62 (72%)
Frame = -2 / -1
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
HA CSAT L *QYQF VFLQ SRSLQQ SST G R G M T PM+DVNTTR T +SA
Sbjct: 631 HAACSATALP*QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASA 452
Query: 481 AA 476
AA
Sbjct: 451 AA 446
Score = 73.9 bits (155), Expect(2) = 3e-021
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR LTS +AM P APVT TV PCP
Sbjct: 259 AFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCPCP 131
Score = 48.7 bits (100), Expect(2) = 3e-021
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R PAS+AA+IT VP SVTGEA W TP QP A+
Sbjct: 478 TRRTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAA 338
Score = 42.8 bits (87), Expect(2) = 2e-032
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++ARQA PGEGLH H +EP
Sbjct: 167 RVHRVVARQAAPGEGLHRQGHSEEP 241
Score = 34.1 bits (68), Expect(2) = 6e-047
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2 / +2
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQ 637
P P ++ R LLER VLQE+ ELVLLRQ
Sbjct: 515 PQPRARRGRRRVLLERS*VLQENQELVLLRQ 607
Score = 33.6 bits (67), Expect = 2.8
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1 / +1
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSSS SWR AT S A+ GT +R T*
Sbjct: 157 PAPPGTSRRGSSSCSWRGATPSRAQ*GTQMTRRMHT* 267
>gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025A09f, mRNA sequence
Length = 669
Score = 174 bits (375), Expect(2) = 6e-047
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 134 GHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 313
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA DAG R V +S
Sbjct: 314 DLLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTS 493
Score = 113 bits (241), Expect(2) = 3e-030
Identities = 43/69 (62%), Positives = 52/69 (75%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AAAD V+RVVFTSSIG V M+P R P VD++CWSDLE+CK T+NWYCY K VA+Q
Sbjct: 449 AAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYCYGKAVADQA 628
Query: 657 AWEVARKRG 683
AW+ A+ G
Sbjct: 629 AWDKAKAPG 655
Score = 90.0 bits (190), Expect(2) = 4e-036
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GD GGGVE AV A +G + V++VG ED+ + GAV+ QV +L +
Sbjct: 427 PHRRLHHLLRVVGDGGGGVEHAVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRV 248
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A D VA LQE LDEP + P +G A+
Sbjct: 247 IWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAH 149
Score = 82.6 bits (174), Expect(2) = 4e-036
Identities = 42/62 (67%), Positives = 44/62 (70%)
Frame = -2 / -1
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
HA SAT L *QYQF VFLQ SRSLQQ SST G R G M T PM+DVNTTR T +SA
Sbjct: 633 HAA*SATALP*QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASA 454
Query: 481 AA 476
AA
Sbjct: 453 AA 448
Score = 73.9 bits (155), Expect(2) = 3e-021
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR LTS +AM P APVT TV PCP
Sbjct: 261 AFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCPCP 133
Score = 48.7 bits (100), Expect(2) = 3e-021
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R PAS+AA+IT VP SVTGEA W TP QP A+
Sbjct: 480 TRRTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAA 340
Score = 42.8 bits (87), Expect(2) = 3e-030
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++ARQA PGEGLH H +EP
Sbjct: 169 RVHRVVARQAAPGEGLHRQGHSEEP 243
Score = 34.1 bits (68), Expect(2) = 6e-047
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2 / +1
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQ 637
P P ++ R LLER VLQE+ ELVLLRQ
Sbjct: 517 PQPRARRGRRRVLLERS*VLQENQELVLLRQ 609
Score = 33.6 bits (67), Expect = 2.8
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSSS SWR AT S A+ GT +R T*
Sbjct: 159 PAPPGTSRRGSSSCSWRGATPSRAQ*GTQMTRRMHT* 269
>gb|CA021049.1|CA021049 HZ38P08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ38P08
5-PRIME, mRNA sequence
Length = 465
Score = 184 bits (396), Expect = 1e-045
Identities = 69/107 (64%), Positives = 84/107 (78%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYM 542
SL AF GCDGV H ASP+ D PE +IEP I GT V+ A AGV+RVV +S+IGT+YM
Sbjct: 61 SLRAAFHGCDGVIHTASPMHDTPEEIIEPVITGTLNVVEMAAGAGVRRVVLSSTIGTMYM 240
Query: 543 NPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
NP+RDP P+DD+CWSDL+YCK T+NWYCYAKT+AE+GAW+ AR G
Sbjct: 241 NPHRDPDAPLDDSCWSDLDYCKQTKNWYCYAKTIAERGAWDAARSLG 381
Score = 121 bits (259), Expect = 9e-027
Identities = 63/131 (48%), Positives = 71/131 (54%)
Frame = -2 / -2
Query: 754 VLAFTVGCXXXXXXXXXXXXXXXXXXXXXXSHAPCSATVLA*QYQFWVFLQYSRSLQQVS 575
VL F +GC SHAP SA VLA*QYQF V LQ SRSLQ S
Sbjct: 452 VLVFILGCSSSPSVTTGITTARSSPSDRAASHAPRSAIVLA*QYQFLVCLQ*SRSLQHES 273
Query: 574 STGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKT 395
S+G GSR GFMY VPM + +TTR TPA +A + T VP S G+A W T
Sbjct: 272 SSGASGSRWGFMYMVPMVEDSTTRRTPAPAAISTTLSVPVITGSMISSGVSCIGDAVWMT 93
Query: 394 PSQPEKASARL 362
PSQP KA+ RL
Sbjct: 92 PSQPWKAARRL 60
Score = 47.8 bits (98), Expect = 1e-004
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +2 / +3
Query: 542 EPLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
EP P P++A R +LERPR+LQ + ELVLLRQD
Sbjct: 240 EPPPRPRRAARRLVLERPRLLQANQELVLLRQD 338
>gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025O19f, mRNA sequence
Length = 661
Score = 165 bits (354), Expect(2) = 2e-044
Identities = 70/122 (57%), Positives = 84/122 (68%)
Frame = +3 / +2
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXX 338
S+G G+TVCVTGAGG+I SWLVK LL+KGY VRGTVRNP D KN HLRAL G
Sbjct: 74 STGHGQTVCVTGAGGYIGSWLVKLLLDKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLC 253
Query: 339 XXXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFT 518
+L +A +GC GVFH ASPVTDDPE M+EPA+RGT ++ AA ++G R V
Sbjct: 254 KADLLDGDALRQAIAGCHGVFHTASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVL 433
Query: 519 SS 524
+S
Sbjct: 434 TS 439
Score = 100 bits (214), Expect(2) = 2e-025
Identities = 41/89 (46%), Positives = 52/89 (58%)
Frame = +3 / +2
Query: 405 AASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTC 584
A+ D EM+ + AAA+ V+RVV TSSIG + M+P R VD++C
Sbjct: 323 ASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTSSIGAIAMDPNRGADAVVDESC 502
Query: 585 WSDLEYCKNTQNWYCYAKTVAEQGAWEVA 671
WSDLE+CK T+NWYCY K A AWE A
Sbjct: 503 WSDLEFCKKTKNWYCYGKAAAXXAAWEAA 589
Score = 92.7 bits (196), Expect(2) = 2e-033
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -1 / -1
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LR++GDR GVEDAV AG+GL + + V+QVG + + + A + PQV VL +
Sbjct: 373 PHRRLHHLLRIVGDRRRGVEDAVAAGDGLAQRVAVEQVGLAQHQPLRRAGESPQVRVLRV 194
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A+ V L++E LDEP + + +GHA+
Sbjct: 193 IGVPDGASHGVPLVEEELDEPRPDVAAGAGHAH 95
Score = 70.7 bits (148), Expect(2) = 2e-033
Identities = 37/62 (59%), Positives = 39/62 (62%)
Frame = -2 / -2
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
HA SA *QYQF VFLQ SRSLQQ SST R G M PM+DV+TTR T SA
Sbjct: 579 HAAXSAAAFP*QYQFLVFLQNSRSLQQDSSTTASAPRLGSMAIAPMDDVSTTRRTVPDSA 400
Query: 481 AA 476
AA
Sbjct: 399 AA 394
Score = 70.3 bits (147), Expect(3) = 5e-021
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPED 158
+FF S+GFLTVPRT P SRR LTS + M PPAPVT TV P P D
Sbjct: 207 AFFASSGFLTVPRTAYPLSRRSLTSHDPM*PPAPVTHTVCPWPVD 73
Score = 42.8 bits (87), Expect(3) = 5e-021
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2 / -2
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKA 374
T R P S+AA++ VP SVTG+A WKTP QP A
Sbjct: 426 TRRTVPDSAAASMMLSVPLTAGSTISSGSSVTGDAVWKTPWQPAMA 289
Score = 38.6 bits (78), Expect(2) = 2e-025
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H ++ARQAPP +G+ RH QEP
Sbjct: 115 RLHRVVARQAPPRQGVRRARHRQEP 189
Score = 35.4 bits (71), Expect(2) = 2e-044
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2 / +1
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLL 631
P P ++ R LLERPRVLQE ELVLL
Sbjct: 463 PQPRRRRRRRRVLLERPRVLQEDQELVLL 549
Score = 26.3 bits (51), Expect(3) = 5e-021
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCR 574
SC TRGRSSR R
Sbjct: 527 SCRTRGRSSRTR 492
>gb|BI956546.1|BI956546 HVSMEn0004B08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004B08f, mRNA sequence
Length = 793
Score = 95.9 bits (203), Expect(3) = 4e-044
Identities = 42/82 (51%), Positives = 50/82 (60%)
Frame = +3 / +3
Query: 279 DPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIR 458
D KN HLRAL G +L A +GC GVFH ASPVTDDPE M+EPA+R
Sbjct: 192 DAKNAHLRALAGAAERLVLCKADLLDADALRAAIAGCHGVFHTASPVTDDPEEMVEPAVR 371
Query: 459 GTRYVMAAADDAGVKRVVFTSS 524
GTRYV+ AA ++G R V +S
Sbjct: 372 GTRYVIDAAAESGTVRRVLLTS 437
Score = 73.9 bits (155), Expect(3) = 4e-044
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVR 269
++G G+TVCVTGAGG+I SW+VK LLEKGY VRGTVR
Sbjct: 70 ATGHGQTVCVTGAGGYIGSWIVKLLLEKGYAVRGTVR 180
Score = 65.7 bits (137), Expect(4) = 3e-031
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GDR GGVEDAV AG+G + + V+QVG + + + A + PQV VL +
Sbjct: 371 PHRRLHHLLRVVGDRRGGVEDAVAAGDGGAQRVGVEQVGLAQHQPLRRAGESPQVRVLGV 192
Score = 57.0 bits (118), Expect(4) = 3e-031
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = -2 / -3
Query: 268 LTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
LTVPRT PFS R LT + M PPAPVT TV PCP
Sbjct: 179 LTVPRTAYPFSSRSLTIHDPM*PPAPVTHTVCPCP 75
Score = 52.4 bits (108), Expect(2) = 6e-010
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R P S+AA++T*RVP SVTGEA WKTP QP A+
Sbjct: 424 TRRTVPDSAAASMT*RVPLTAGSTISSGSSVTGEAVWKTPWQPAMAA 284
Score = 47.8 bits (98), Expect(3) = 4e-044
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3 / +1
Query: 585 WSDLEYCKNTQNWYCYAKTVAE 650
WSDL +CK T+NW CY KTVA+
Sbjct: 502 WSDLGFCKKTENWCCYGKTVAD 567
Score = 37.7 bits (76), Expect(3) = 9e-011
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2 / +3
Query: 581 LLERPRVLQEHPELVLLRQD 640
L+ERPRVLQE ELVLLR+D
Sbjct: 498 LVERPRVLQEDRELVLLRED 557
Score = 37.7 bits (76), Expect(3) = 9e-011
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
AAA+ V+RV+ TSSIG V M+P R P D+
Sbjct: 393 AAAESGTVRRVLLTSSIGAVAMDPSRAPDAGGDE 494
Score = 35.4 bits (71), Expect(4) = 3e-031
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -2 / -1
Query: 577 SSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAA 476
SS G+R G M T PM+DV+ TR T SAAA
Sbjct: 493 SSPPASGARLGSMATAPMDDVSRTRRTVPDSAAA 392
Score = 34.1 bits (68), Expect(3) = 9e-011
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQE 271
R+H ++ RQAP GEG+ RH QE
Sbjct: 111 RLHRVVDRQAPAGEGVRRARHRQE 182
Score = 33.1 bits (66), Expect(4) = 3e-031
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQ 581
SATV *Q+QF VFLQ RSL Q
Sbjct: 566 SATVFP*QHQFSVFLQNPRSLHQ 498
Score = 31.8 bits (63), Expect(2) = 6e-010
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1 / -2
Query: 269 PDRAADCVALLQEALDEPGGNEPSSSGHAN 180
PD A+ V LLQ+ LD+P + + +GHA+
Sbjct: 180 PDGASHGVPLLQQELDDPRPDVAAGAGHAH 91
>gb|BQ763205.1|BQ763205 EBro02_SQ007_F14_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_F14 5', mRNA sequence
Length = 426
Score = 149 bits (320), Expect = 4e-035
Identities = 73/133 (54%), Positives = 78/133 (58%)
Frame = -2 / -2
Query: 874 AWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGCXXXXXXXXXXXX 695
AWGAS TR CA ATS T TYAC A +A+P RY + LAFTVGC
Sbjct: 425 AWGASKTRRCAPATSRTSTYACTALAYFLAEPSRYLRMCAALAFTVGCSSGPTTSTGFTT 246
Query: 694 XXXXXXXXXXSHAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDV 515
SHA CSAT L *QYQF VFLQ SRSLQQ SST G R G M T PM+DV
Sbjct: 245 TRSTPRALAFSHAACSATALP*QYQFLVFLQNSRSLQQDSSTTTSGPRLGSMVTAPMDDV 66
Query: 514 NTTRFTPASSAAA 476
NTTR T +SAAA
Sbjct: 65 NTTRRTVPASAAA 27
Score = 120 bits (257), Expect(2) = 1e-043
Identities = 47/69 (68%), Positives = 53/69 (76%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AAAD V+RVVFTSSIG V M+P R P VD++CWSDLE+CK T+NWYCY K VAEQ
Sbjct: 28 AAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKKTKNWYCYGKAVAEQA 207
Query: 657 AWEVARKRG 683
AWE AR RG
Sbjct: 208 AWEKARARG 234
Score = 77.1 bits (162), Expect(2) = 1e-043
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHA 875
NAS H++KYL GSA Y NA QAYV VRDVA AH+RV+EAPHA
Sbjct: 295 NASAAHILKYLDGSARKYANAVQAYVDVRDVAGAHLRVFEAPHA 426
Score = 34.1 bits (68), Expect(2) = 0.001
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2 / +3
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQ 637
P P ++ R LLER VLQE+ ELVLLRQ
Sbjct: 96 PQPRARRGRRRVLLERS*VLQENQELVLLRQ 188
Score = 29.0 bits (57), Expect(2) = 0.001
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 453 IRGTRYVMAAADDAGVKRVVFTSS 524
+RGT YV+ AA DAG R V +S
Sbjct: 1 VRGTEYVIDAAADAGTVRRVVFTS 72
>gb|BI958862.1|BI958862 HVSMEn0016O20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016O20f, mRNA sequence
Length = 670
Score = 174 bits (375), Expect = 9e-043
Identities = 73/120 (60%), Positives = 84/120 (70%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 135 GHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 314
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA DAG R V +S
Sbjct: 315 DLLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTS 494
Score = 90.0 bits (190), Expect(2) = 7e-029
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GD GGGVE AV A +G + V++VG ED+ + GAV+ QV +L +
Sbjct: 428 PHRRLHHLLRVVGDGGGGVEHAVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRV 249
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A D VA LQE LDEP + P +G A+
Sbjct: 248 IWVPHCALDGVAPLQEQLDEPRRDVPGGAGDAH 150
Score = 73.9 bits (155), Expect(2) = 3e-021
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR LTS +AM P APVT TV PCP
Sbjct: 262 AFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCPCP 134
Score = 62.5 bits (130), Expect(2) = 3e-015
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAK 638
AAAD V+RVVFTSSIG V M+P R P VD++C SDL + T+N Y K
Sbjct: 450 AAADAGTVRRVVFTSSIGAVTMDPNRGPDVVVDESC*SDL*FLAETKNLYLLRK 611
Score = 58.3 bits (121), Expect(2) = 7e-029
Identities = 29/51 (56%), Positives = 34/51 (66%)
Frame = -2 / -1
Query: 628 QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAA 476
+Y+F V + RSLQQ SST G R G M T PM+DVNTTR T +SAAA
Sbjct: 601 KYKFLVSARNQRSLQQDSSTTTSGPRLGSMVTAPMDDVNTTRRTVPASAAA 449
Score = 48.7 bits (100), Expect(2) = 3e-021
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R PAS+AA+IT VP SVTGEA W TP QP A+
Sbjct: 481 TRRTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAA 341
Score = 42.8 bits (87), Expect(2) = 3e-015
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++ARQA PGEGLH H +EP
Sbjct: 170 RVHRVVARQAAPGEGLHRQGHSEEP 244
Score = 33.6 bits (67), Expect = 2.8
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1 / +1
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSSS SWR AT S A+ GT +R T*
Sbjct: 160 PAPPGTSRRGSSSCSWRGATPSRAQ*GTQMTRRMHT* 270
>gb|BJ450530.1|BJ450530 BJ450530 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak30a24 5', mRNA sequence
Length = 439
Score = 161 bits (346), Expect(2) = 5e-042
Identities = 65/105 (61%), Positives = 77/105 (73%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS H +KYL GSA Y NA QA V VRDV AH+RV+EAP A GRY+CAE LHR D+
Sbjct: 9 NASAAHXLKYLDGSARKYANAVQAXVDVRDVXGAHLRVFEAPQASGRYLCAERVLHRQDV 188
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+LAKLFPEY VPT+C D+VNP YK +NQ+L+DLG+ F PV
Sbjct: 189 VHILAKLFPEYXVPTRCXDEVNPRKQPYKMSNQKLQDLGLKFTPV 323
Score = 119 bits (254), Expect(2) = 2e-027
Identities = 60/107 (56%), Positives = 63/107 (58%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG PRS S WL L G T S HLVGT YSGKSLAR S RCR SAQ *RP
Sbjct: 322 TGVNLRPRSCSFWLDIL*GCFRGFTSSXHLVGTXYSGKSLARMWTTSWRCRTRSAQR*RP 143
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTV 737
AWGAS TR CA TS T T AC A +A+P RY + LAFTV
Sbjct: 142 EAWGASKTRRCAPXTSRTSTXACTALAYFLAEPSRYLXMCAALAFTV 2
Score = 66.1 bits (138), Expect = 4e-010
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = -1 / -3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ +IL+ LVG LV V+LV A VL EELGE+ +V AVQ ALGA+VAA
Sbjct: 320 RSELEAKILQLLVGHLVRLLPWVHLVXAPCWDXVLGEELGENVDDVLAVQDALGAEVAAG 141
Query: 875 RVGRLVHPDVR 843
+GRL P+VR
Sbjct: 140 GLGRLEDPEVR 108
Score = 30.9 bits (61), Expect(2) = 5e-042
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 1067 LYETVTSLQEKGMLPV 1114
LYETV SLQEKG PV
Sbjct: 333 LYETVKSLQEKGHXPV 380
Score = 24.4 bits (47), Expect(2) = 2e-027
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 1113 TGSMPFSWRLVTVS*R 1066
TG PFS RL TVS R
Sbjct: 379 TGXCPFSXRLFTVSYR 332
>gb|BI957284.1|BI957284 HVSMEn0008K05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0008K05f, mRNA sequence
Length = 860
Score = 171 bits (368), Expect = 8e-042
Identities = 72/120 (60%), Positives = 83/120 (69%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLV LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 120 GHGQTVCVTGAAGYIASWLVGLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 299
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
++ A GC GVFH ASPVTDDPE M+EPA+RGT YV+ AA DAG R V +S
Sbjct: 300 DLLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAVRGTEYVIDAAADAGTVRRVVFTS 479
Score = 86.8 bits (183), Expect(2) = 5e-021
Identities = 44/93 (47%), Positives = 57/93 (61%)
Frame = -1 / -1
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GD GGGVE AV A +G + V++VG ED+ + GAV+ QV +L +
Sbjct: 413 PHRRLHHLLRVVGDGGGGVEHAVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRV 234
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A D VA LQE DEP + P +G A+
Sbjct: 233 IWVPHCALDGVAPLQEQPDEPRRDVPGGAGDAH 135
Score = 70.7 bits (148), Expect(2) = 3e-020
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR TS +AM P APVT TV PCP
Sbjct: 247 AFFGSSGFLTVPLTV*PLSRSSPTSHDAMYPAAPVTHTVCPCP 119
Score = 48.7 bits (100), Expect(2) = 3e-020
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = -2 / -2
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R PAS+AA+IT VP SVTGEA W TP QP A+
Sbjct: 466 TRRTVPASAAASITYSVPLTAGSTICSGSSVTGEAVWNTPWQPSTAA 326
Score = 40.9 bits (83), Expect(2) = 7e-007
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++AR+A PGEGLH H +EP
Sbjct: 155 RVHRVVARRAAPGEGLHRQGHSEEP 229
Score = 36.3 bits (73), Expect(2) = 7e-007
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPS 563
AAAD V+RVVFTS IG M+P R P+
Sbjct: 435 AAADAGTVRRVVFTSCIGGGTMDPNRGPT 521
Score = 35.0 bits (70), Expect(2) = 5e-021
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -2 / -2
Query: 562 LGSR*GFMYTVPMEDVNTTRFTPASSAAA 476
+G R G M PM DVNTTR T +SAAA
Sbjct: 520 VGPRLGSMVPPPMXDVNTTRRTVPASAAA 434
Score = 31.8 bits (63), Expect = 9.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1 / +1
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSS SWR AT S A+ GT +R T*
Sbjct: 145 PAPPGTSRRGSSGCSWRGATPSRAQ*GTQMTRRMHT* 255
>gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27a15 5', mRNA sequence
Length = 505
Score = 101 bits (215), Expect(2) = 1e-041
Identities = 44/81 (54%), Positives = 48/81 (59%)
Frame = +3 / +3
Query: 186 VTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQS 365
VTG GGFIASWLVK LL +GY V TVR+P D KN HL LDG +
Sbjct: 3 VTGGGGFIASWLVKLLLSRGYAVHATVRDPSDQKNAHLMQLDGAAENLRLFKADVLDSAA 182
Query: 366 LAEAFSGCDGVFHAASPVTDD 428
LA A GC+GVFH ASPV D
Sbjct: 183 LAAAVEGCEGVFHVASPVPAD 245
Score = 90.0 bits (190), Expect(2) = 1e-041
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +3 / +3
Query: 408 ASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
A + D ++ PA++GT + V++VV SS V NP KP D++CW
Sbjct: 240 ADKILDPESEVMVPAVKGTLNTLEVCSSLKVQKVVVVSSTAAVRYNPNWPLGKPKDESCW 419
Query: 588 SDLEYCKNTQNWYCYAKTVAEQGAWEVA 671
SD + CK+ + WYC AKTVAEQ WE A
Sbjct: 420 SDRKVCKDNEIWYCLAKTVAEQTVWEYA 503
Score = 62.0 bits (129), Expect(2) = 1e-015
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
D GG +EDA+ +G G+ V+ VG E+ + + V+ Q+ VL + V D D VA
Sbjct: 236 DGGGDMEDALAPLDGGGQRGAVEHVGLEQTQVLRRPVQLHQMRVLLVTGVADGGVDGVAP 57
Query: 239 LQEALDEPGGNEPSSSGH 186
+E LDEP G+EP+++GH
Sbjct: 56 GEEQLDEPRGDEPAAAGH 3
Score = 46.9 bits (96), Expect(2) = 8e-009
Identities = 22/36 (61%), Positives = 23/36 (63%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVT 185
+FF S G TV T *P R LTS EAMNPP PVT
Sbjct: 109 AFFWSLGSRTVAWTA*PRERSSLTSHEAMNPPPPVT 2
Score = 41.4 bits (84), Expect(2) = 1e-015
Identities = 23/49 (46%), Positives = 28/49 (57%)
Frame = -2 / -1
Query: 652 CSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTT 506
CSATVLA QYQ + L S QQ+SS GL + G T ++D TT
Sbjct: 484 CSATVLARQYQISLSLHTFLSDQQLSSLGLPRGQLGL*RTAAVDDTTTT 338
Score = 35.4 bits (71), Expect = 0.78
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+ARQA P GL PRH P
Sbjct: 17 RVHRLVARQAAPLPGLRRPRHRPRP 91
Score = 33.6 bits (67), Expect(2) = 8e-009
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASA 368
TGEA WKTPS P A+A
Sbjct: 235 TGEATWKTPSHPSTAAA 185
>gb|BU975402.1|BU975402 HB31A09r BC Hordeum vulgare subsp. vulgare cDNA clone HB31A09
5-PRIME, mRNA sequence
Length = 557
Score = 89.0 bits (188), Expect(3) = 2e-041
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYIC 893
NAS HV+KYL GSA TY NA QAYVHVRD A AHV V+EAP A GRY+C
Sbjct: 61 NASLTHVLKYLDGSAKTYANAVQAYVHVRDTAAAHVLVFEAPAAAGRYLC 210
Score = 79.9 bits (168), Expect(3) = 2e-041
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +3 / +1
Query: 900 STLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+ LHR D+ +L K FPEYP+P++C D VNP YK +NQRL++LG++F PV
Sbjct: 223 AVLHREDVVTILRKFFPEYPIPSRCSDSVNPRKRPYKMSNQRLRELGLEFTPV 381
Score = 75.3 bits (158), Expect(3) = 6e-029
Identities = 33/52 (63%), Positives = 36/52 (69%)
Frame = -2 / -1
Query: 886 *RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
*RP A GAS TRTCA+A S TCTYAC A V+A+P RY T LAFT GC
Sbjct: 203 *RPAAAGASKTRTCAAAVSRTCTYACTALAYVLAEPSRYLSTCVRLAFTAGC 48
Score = 46.4 bits (95), Expect(3) = 6e-029
Identities = 24/49 (48%), Positives = 26/49 (53%)
Frame = -2 / -1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPR 911
TG S P S S W LY G T S HL+G GYSGK+L R S R
Sbjct: 380 TGVNSRPSSRSRWFDILYGRFLGFTESEHLLGMGYSGKNLRRMVTTSSR 234
Score = 44.6 bits (91), Expect(3) = 6e-029
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 1119 GSTGSMPFSWRLVTVS*RHC 1060
G TG MPFSW+L TVS*RHC
Sbjct: 443 GGTGRMPFSWKLTTVS*RHC 384
Score = 44.1 bits (90), Expect(2) = 2e-005
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = -1 / -3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQ 906
R E+ Q+ EPLV LV RV+ V A G GVL EEL ED V V+
Sbjct: 378 RRELEAQLTEPLVRHLVRPLPRVHRVRAPAGDGVLGEELAEDGDHVLPVE 229
Score = 40.0 bits (81), Expect(3) = 2e-041
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVLP 1120
QCLY+TV S QEKG+LPV P
Sbjct: 385 QCLYDTVVSFQEKGILPVPP 444
Score = 24.4 bits (47), Expect(2) = 2e-005
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2 / -3
Query: 1120 RKHGQHAFLLEAGDRLVEAL 1061
R+ + A LLEA D +VEAL
Sbjct: 444 RRDREDALLLEADDGVVEAL 385
>gb|BU975696.1|BU975696 HB32A09r BC Hordeum vulgare subsp. vulgare cDNA clone HB32A09
5-PRIME, mRNA sequence
Length = 559
Score = 89.0 bits (188), Expect(3) = 2e-041
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYIC 893
NAS HV+KYL GSA TY NA QAYVHVRD A AHV V+EAP A GRY+C
Sbjct: 61 NASLTHVLKYLDGSAKTYANAVQAYVHVRDTAAAHVLVFEAPAAAGRYLC 210
Score = 79.9 bits (168), Expect(3) = 2e-041
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +3 / +1
Query: 900 STLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+ LHR D+ +L K FPEYP+P++C D VNP YK +NQRL++LG++F PV
Sbjct: 223 AVLHREDVVTILRKFFPEYPIPSRCSDSVNPRKRPYKMSNQRLRELGLEFTPV 381
Score = 75.3 bits (158), Expect(3) = 6e-029
Identities = 33/52 (63%), Positives = 36/52 (69%)
Frame = -2 / -3
Query: 886 *RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
*RP A GAS TRTCA+A S TCTYAC A V+A+P RY T LAFT GC
Sbjct: 203 *RPAAAGASKTRTCAAAVSRTCTYACTALAYVLAEPSRYLSTCVRLAFTAGC 48
Score = 46.4 bits (95), Expect(3) = 6e-029
Identities = 24/49 (48%), Positives = 26/49 (53%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPR 911
TG S P S S W LY G T S HL+G GYSGK+L R S R
Sbjct: 380 TGVNSRPSSRSRWFDILYGRFLGFTESEHLLGMGYSGKNLRRMVTTSSR 234
Score = 44.6 bits (91), Expect(3) = 6e-029
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -3
Query: 1119 GSTGSMPFSWRLVTVS*RHC 1060
G TG MPFSW+L TVS*RHC
Sbjct: 443 GGTGRMPFSWKLTTVS*RHC 384
Score = 44.1 bits (90), Expect(2) = 2e-005
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = -1 / -2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQ 906
R E+ Q+ EPLV LV RV+ V A G GVL EEL ED V V+
Sbjct: 378 RRELEAQLTEPLVRHLVRPLPRVHRVRAPAGDGVLGEELAEDGDHVLPVE 229
Score = 40.0 bits (81), Expect(3) = 2e-041
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 1061 QCLYETVTSLQEKGMLPVLP 1120
QCLY+TV S QEKG+LPV P
Sbjct: 385 QCLYDTVVSFQEKGILPVPP 444
Score = 24.4 bits (47), Expect(2) = 2e-005
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 1120 RKHGQHAFLLEAGDRLVEAL 1061
R+ + A LLEA D +VEAL
Sbjct: 444 RRDREDALLLEADDGVVEAL 385
>gb|BF263684.3|BF263684 HV_CEa0007G07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007G07f, mRNA sequence
Length = 437
Score = 165 bits (355), Expect = 5e-040
Identities = 71/122 (58%), Positives = 82/122 (67%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXX 338
++G TVCVTGAGG+I SW+VK LLEKGY VRGTVRNP D KN HLRAL G
Sbjct: 49 ATGDWHTVCVTGAGGYIGSWIVKLLLEKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLC 228
Query: 339 XXXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFT 518
+L A +GC GVFH ASPVTDDPE M+EPA+RGTRYV+ AA +G R V
Sbjct: 229 KADLLDGDALRAAIAGCHGVFHTASPVTDDPEEMVEPAVRGTRYVIDAAAQSGTVRRVVL 408
Query: 519 SS 524
+S
Sbjct: 409 TS 414
Score = 88.6 bits (187), Expect(2) = 1e-019
Identities = 43/93 (46%), Positives = 60/93 (64%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GDR GGVE AV AG+G + + V+QVG + + + A + PQV VL +
Sbjct: 348 PHRRLHHLLRVVGDRRGGVEYAVAAGDGGAQRVAVEQVGLAQHQPLRRAGESPQVRVLRV 169
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A+ V LLQ+ LD+P + + +GHA+
Sbjct: 168 IWVPDGASHGVPLLQQELDDPRPDVAAGAGHAH 70
Score = 64.8 bits (135), Expect(2) = 5e-018
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FF S+GFLTVPRT PFS R LT Q+ M PPAPVT TV P
Sbjct: 182 AFFASSGFLTVPRTAYPFSSRSLTIQDPM*PPAPVTHTVCQSP 54
Score = 46.9 bits (96), Expect(2) = 5e-018
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
T R P +AA++T*RVP SVTGEA W TP QP A+
Sbjct: 401 TRRTVPDWAAASMT*RVPLTAGSTISSGSSVTGEAVWNTPWQPAMAA 261
Score = 38.6 bits (78), Expect(2) = 1e-004
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H +L RQAP GEG+ RH QEP
Sbjct: 90 RLHRVLDRQAPAGEGVRRARHRQEP 164
Score = 38.2 bits (77), Expect = 0.12
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +1 / +2
Query: 184 A*PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT*G 303
A*P + GSSS+ WRR T A SGT +RT T*G
Sbjct: 74 A*PAPAATSGLGSSSSCWRRGTPCEAPSGTQMTRRTRT*G 193
Score = 29.9 bits (59), Expect(2) = 1e-004
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYM 542
AAA V+RVV TSSIG V M
Sbjct: 370 AAAQSGTVRRVVLTSSIGAVAM 435
Score = 28.6 bits (56), Expect(2) = 1e-019
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAA 476
M T PM+DV+TTR T AAA
Sbjct: 434 MATAPMDDVSTTRRTVPDWAAA 369
>gb|BI957975.1|BI957975 HVSMEn0012L23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012L23f, mRNA sequence
Length = 455
Score = 165 bits (354), Expect = 7e-040
Identities = 70/122 (57%), Positives = 84/122 (68%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXX 338
S+G G+TVCVTGAGG+I SWLVK LL+KGY VRGTVRNP D KN HLRAL G
Sbjct: 67 STGHGQTVCVTGAGGYIGSWLVKLLLDKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLC 246
Query: 339 XXXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFT 518
+L +A +GC GVFH ASPVTDDPE M+EPA+RGT ++ AA ++G R V
Sbjct: 247 KADLLDGDALRQAIAGCHGVFHTASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVL 426
Query: 519 SS 524
+S
Sbjct: 427 TS 432
Score = 92.7 bits (196), Expect(2) = 5e-021
Identities = 43/93 (46%), Positives = 61/93 (65%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LR++GDR GVEDAV AG+GL + + V+QVG + + + A + PQV VL +
Sbjct: 366 PHRRLHHLLRIVGDRRRGVEDAVAAGDGLAQRVAVEQVGLAQHQPLRRAGESPQVRVLRV 187
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD A+ V L++E LDEP + + +GHA+
Sbjct: 186 IGVPDGASHGVPLVEEELDEPRPDVAAGAGHAH 88
Score = 70.3 bits (147), Expect(2) = 2e-018
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPED 158
+FF S+GFLTVPRT P SRR LTS + M PPAPVT TV P P D
Sbjct: 200 AFFASSGFLTVPRTAYPLSRRSLTSHDPM*PPAPVTHTVCPWPVD 66
Score = 42.8 bits (87), Expect(2) = 2e-018
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKA 374
T R P S+AA++ VP SVTG+A WKTP QP A
Sbjct: 419 TRRTVPDSAAASMMLSVPLTAGSTISSGSSVTGDAVWKTPWQPAMA 282
Score = 38.6 bits (78), Expect(2) = 5e-005
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H ++ARQAPP +G+ RH QEP
Sbjct: 108 RLHRVVARQAPPRQGVRRARHRQEP 182
Score = 31.3 bits (62), Expect(2) = 5e-005
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3 / +1
Query: 405 AASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYM 542
A+ D EM+ + AAA+ V+RVV TSSIG + M
Sbjct: 316 ASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTSSIGAIAM 453
Score = 29.0 bits (57), Expect(2) = 5e-021
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAA 476
M PM+DV+TTR T SAAA
Sbjct: 452 MAIAPMDDVSTTRRTVPDSAAA 387
>gb|BI959591.1|BI959591 HVSMEn0020F03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020F03f, mRNA sequence
Length = 646
Score = 165 bits (354), Expect = 7e-040
Identities = 68/111 (61%), Positives = 77/111 (69%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IA WLVK LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 130 GHGQTVCVTGAAGYIAWWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 309
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAG 497
++ A GC GVFH ASPVTDDPE M+EPA RGT YV+ A DAG
Sbjct: 310 DLLDYDAICAAVEGCHGVFHTASPVTDDPEQMVEPAARGTEYVIDAGADAG 462
Score = 89.5 bits (189), Expect = 4e-017
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = -1 / -2
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LRV+GD GGGVE AV A +G + V++VG ED+ + GAV+ QV +L +
Sbjct: 423 PRRRLHHLLRVVGDGGGGVEHAVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRV 244
Query: 278 HRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VP A D VA LQE LDEP + P +G A+
Sbjct: 243 IWVPHCALDGVAPLQEQLDEPPRDVPGGAGDAH 145
Score = 73.0 bits (153), Expect(2) = 2e-019
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR LTS AM P APVT TV PCP
Sbjct: 257 AFFGSSGFLTVPLTV*PLSRSSLTSHHAMYPAAPVTHTVCPCP 129
Score = 43.2 bits (88), Expect(2) = 2e-019
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -2 / -3
Query: 496 PASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKAS 371
PAS+ A+IT VP SVTGEA W TP QP A+
Sbjct: 461 PASAPASITYSVPLAAGSTICSGSSVTGEAVWNTPWQPSTAA 336
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++ARQA PGEGLH H +EP
Sbjct: 165 RVHRVVARQAAPGEGLHRQGHSEEP 239
Score = 33.6 bits (67), Expect = 2.8
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1 / +2
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSSS SWR AT S A+ GT +R T*
Sbjct: 155 PAPPGTSRGGSSSCSWRGATPSRAQ*GTQMTRRMHT* 265
>gb|BQ467661.1|BQ467661 HS04H17r HS Hordeum vulgare subsp. vulgare cDNA clone HS04H17
5-PRIME, mRNA sequence
Length = 486
Score = 124 bits (266), Expect(2) = 2e-039
Identities = 49/100 (49%), Positives = 66/100 (66%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S+ HV +YLTG+ + Y NA AY VRDVA AHV VYE P A GRY+C + LHR
Sbjct: 186 NFSSSHVARYLTGAKSIYPNAVAAYTDVRDVARAHVLVYEHPDARGRYLCIGAVLHRTHF 365
Query: 924 CRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGM 1043
++L LFP+Y + KC++ P YKF+N+RL++LG+
Sbjct: 366 LQLLGDLFPQYHITAKCEEDGKPMAKPYKFSNRRLRELGL 485
Score = 72.1 bits (151), Expect(2) = 7e-013
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = -1 / -2
Query: 1037 QILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLV 858
Q+ +P VGELV + ++ ALGGY VLREE+ E+ EV AVQ A+VAA RVG LV
Sbjct: 479 QLPQPSVGELVRLRHGLAVLFALGGYVVLREEVAEELKEVGAVQHGADAEVAAARVGVLV 300
Query: 857 HPDVRLG 837
DV G
Sbjct: 299 DEDVGAG 279
Score = 70.7 bits (148), Expect(2) = 6e-016
Identities = 45/103 (43%), Positives = 50/103 (48%)
Frame = -2 / -3
Query: 1039 PRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGAS 860
P SLSL L NLY GL S HL Y GK R+ ++ RC Q *RP A G S
Sbjct: 481 PSSLSLRLENLYGFAMGLPSSSHLAVMWYCGKRSPRS*RKWVRCSTAPMQR*RPRASGCS 302
Query: 859 YTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
TRT A ATS T A A *+ PVR TW +L C
Sbjct: 301 *TRTWARATSRTSV*AATALG*IDLAPVR*RATWLLLKLRDCC 173
Score = 58.8 bits (122), Expect(2) = 2e-039
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +3 / +3
Query: 561 SKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
++ +D+ CWSD ++CKNT N YC AK +AE A E A KRG
Sbjct: 3 ARGLDEACWSDYDFCKNTGNLYCCAKMMAEITATEEAAKRG 125
Score = 35.4 bits (71), Expect(2) = 0.007
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 575 RHLLERPRVLQEHPELVLLRQD 640
R LLER R+LQEH + VLLRQD
Sbjct: 17 RGLLERLRLLQEHRQPVLLRQD 82
Score = 34.1 bits (68), Expect(2) = 6e-016
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A SA +LA QY+ VFLQ S SLQQ SS+
Sbjct: 100 AVISAIILAQQYRLPVFLQKS*SLQQASSS 11
Score = 27.2 bits (53), Expect(2) = 0.007
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2 / +2
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSG 1039
VP QV+ G +QV QP+A+G+G
Sbjct: 395 VPHNRQVRRGRQAHGEAVQVLQPKAEGAG 481
Score = 24.9 bits (48), Expect(2) = 7e-013
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -1
Query: 612 CSCNTRGRSSRCR 574
CSC +R RSSR R
Sbjct: 54 CSCRSRSRSSRPR 16
>gb|BE230902.1|BE230902 HVSMEg0001E18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0001E18f, mRNA sequence
Length = 618
Score = 83.5 bits (176), Expect(3) = 2e-039
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +3 / +3
Query: 759 HVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYIC 893
HV+KYL GSA TY NA QAYVHVRD A AHV V+EAP A GRY+C
Sbjct: 3 HVLKYLDGSAKTYANAVQAYVHVRDTAAAHVLVFEAPAAAGRYLC 137
Score = 78.0 bits (164), Expect(3) = 2e-039
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +3 / +3
Query: 900 STLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+ LHR D+ +L K FPEYP+P++C D VNP YK +N+RL++LG++F PV
Sbjct: 150 AVLHREDVVTILRKFFPEYPIPSRCSDSVNPRKRPYKMSNRRLRELGLEFTPV 308
Score = 57.9 bits (120), Expect(3) = 3e-022
Identities = 26/42 (61%), Positives = 29/42 (69%)
Frame = -2 / -3
Query: 886 *RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFIT 761
*RP A GAS TRTCA+A S TCTYA A V+A+P RY T
Sbjct: 130 *RPAAAGASKTRTCAAAVSRTCTYAWTALAYVLAEPSRYLST 5
Score = 44.6 bits (91), Expect(3) = 3e-022
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3 / -3
Query: 1119 GSTGSMPFSWRLVTVS*RHC 1060
G TG MPFSW+L TVS*RHC
Sbjct: 370 GGTGRMPFSWKLTTVS*RHC 311
Score = 40.9 bits (83), Expect(3) = 3e-022
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = -1 / -2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQ 906
R E+ Q+ EP V LV RV+ V A G GVL EEL ED V V+
Sbjct: 305 RRELEAQLTEPPVRHLVRPLPRVHRVRAPAGDGVLGEELAEDGDHVLPVE 156
Score = 40.0 bits (81), Expect(2) = 4e-004
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPR 911
TG S P S S LY G T S HL+G GYSGK+L R S R
Sbjct: 307 TGVNSRPSSRSRRFDILYGRFLGFTESEHLLGMGYSGKNLRRMVTTSSR 161
Score = 40.0 bits (81), Expect(3) = 2e-039
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / +3
Query: 1061 QCLYETVTSLQEKGMLPVLP 1120
QCLY+TV S QEKG+LPV P
Sbjct: 312 QCLYDTVVSFQEKGILPVPP 371
Score = 24.4 bits (47), Expect(2) = 4e-004
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2 / -2
Query: 1120 RKHGQHAFLLEAGDRLVEAL 1061
R+ + A LLEA D +VEAL
Sbjct: 371 RRDREDALLLEADDGVVEAL 312
>gb|BI958460.1|BI958460 HVSMEn0015C07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015C07f, mRNA sequence
Length = 656
Score = 125 bits (267), Expect = 7e-028
Identities = 64/125 (51%), Positives = 68/125 (54%)
Frame = -2 / -1
Query: 967 VGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VV 788
VGT +S KS R R S R R SAQ *RP AWGAS TR CA ATS T TYAC A +
Sbjct: 377 VGTRHSRKSSPRMRNTSCR*RTRSAQR*RPEAWGASKTRRCAPATSRTSTYACTALAYFL 198
Query: 787 ADPVRYFITWSVLAFTVGCXXXXXXXXXXXXXXXXXXXXXXSHAPCSATVLA*QYQFWVF 608
A+P RY AFTVGC SHA CSAT L *QYQF VF
Sbjct: 197 AEPSRYLRMCPPPAFTVGCSSGPTTSTGFTTTRSTPRALAFSHAACSATALP*QYQFLVF 18
Query: 607 LQYSR 593
LQ+SR
Sbjct: 17 LQHSR 3
Score = 116 bits (249), Expect(2) = 1e-038
Identities = 49/83 (59%), Positives = 58/83 (69%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NA H++KYL GSA Y NA QAYV VRDVA AH+RV+EAP A GRY+CA+ LHR D+
Sbjct: 154 NAGGGHILKYLDGSARKYANAVQAYVDVRDVAGAHLRVFEAPQASGRYLCADRVLHRQDV 333
Query: 924 CRVLAKLFPEYPVPTKCKDQVNP 992
+L +LF E VPT QVNP
Sbjct: 334 FLILGELFRECRVPTGGSGQVNP 402
Score = 63.8 bits (133), Expect(2) = 1e-038
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +3 / +1
Query: 591 DLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
DLE CK T+NWYCY K VAEQ AWE AR RG
Sbjct: 1 DLECCKKTKNWYCYGKAVAEQAAWEKARARG 93
Score = 49.2 bits (101), Expect = 6e-005
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = -1 / -3
Query: 992 RVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRVGRLVHPDVRLG 837
RV+L A + L EEL ED V V+ A+GA+VAA +GRL P+VR G
Sbjct: 402 RVHLSRAPRWHAALPEELAEDEEHVLPVKDAIGAEVAAGGLGRLEDPEVRAG 247
>gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. vulgare cDNA clone HX11M09
5-PRIME, mRNA sequence
Length = 647
Score = 73.5 bits (154), Expect(3) = 1e-038
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +3 / +2
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A +A VKRVV SS+ V NP K D+ WSD +
Sbjct: 413 TNPEEEVIAPAVTGTLNVLKACYEAKVKRVVMVSSVAAVSNNPNWPKGKFFDEDSWSDED 592
Query: 600 YCKNTQNWYCYAKTVAEQ 653
C+ ++WY +KT+AE+
Sbjct: 593 LCRKGEDWYFLSKTLAER 646
Score = 71.2 bits (149), Expect(3) = 1e-038
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = +3 / +2
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GCDGVFH ASPV
Sbjct: 224 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLNYDSIASAVAGCDGVFHVASPV 397
Score = 54.2 bits (112), Expect(3) = 1e-038
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGY 248
+TVCVTGAGGFIASWLVK LL KG+
Sbjct: 149 KTVCVTGAGGFIASWLVKLLLSKGH 223
Score = 42.3 bits (86), Expect(3) = 4e-014
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RR LTS EAM PPAPVT TV
Sbjct: 219 PLERRSLTSHEAMKPPAPVTHTV 151
Score = 40.5 bits (82), Expect(3) = 4e-014
Identities = 29/64 (45%), Positives = 33/64 (51%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA+VL +YQ FLQ S S Q SS L + G + T ED TTR T AS A T
Sbjct: 642 SASVLERKYQSSPFLQRSSSDQLSSSKNLPLGQLGLLDTAATEDTMTTRLTFAS*QAFKT 463
Query: 469 *RVP 458
VP
Sbjct: 462 FSVP 451
Score = 32.7 bits (65), Expect(3) = 4e-014
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 396 TGLATWKTPSQPATADAML 340
Score = 31.8 bits (63), Expect(2) = 0.002
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEE 333
DR +ED +TA A+ VQQVGAE+
Sbjct: 397 DRASNMEDPITASNR*RNAVVVQQVGAEQ 311
Score = 29.9 bits (59), Expect(2) = 0.002
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1 / -2
Query: 248 VALLQEALDEPGGNEPSSSGHAN 180
V+L +E LDEP G+E S + HA+
Sbjct: 223 VSLGEEELDEPRGDEASCASHAH 155
>gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 5', mRNA sequence
Length = 578
Score = 78.5 bits (165), Expect(3) = 2e-038
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3 / +2
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 311 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 490
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 491 LCRKGEDWYLLSKTRAEREAFAYAAKTG 574
Score = 69.3 bits (145), Expect(3) = 2e-038
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +2
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 122 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 295
Score = 50.6 bits (104), Expect(3) = 2e-038
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGY 248
G+ VCVTGAGGF+ASWLVK LL K +
Sbjct: 38 GEXSVVCVTGAGGFVASWLVKLLLSKAH 121
Score = 35.4 bits (71), Expect(3) = 2e-011
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 235 RRRLTSQEAMNPPAPVTQTVRPCP 164
RR LTS EA PPAPVT T P
Sbjct: 108 RRSLTSHEATKPPAPVTHTTLXSP 37
Score = 35.4 bits (71), Expect(3) = 2e-011
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 295 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 116
Query: 239 LQE 231
L E
Sbjct: 115 LGE 107
Score = 35.0 bits (70), Expect(3) = 2e-011
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 540 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 361
Query: 469 *RVP 458
VP
Sbjct: 360 FSVP 349
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 294 TGLATWKTPSQPATADAML 238
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 133 ADSVVGLGEEELDEP*GDEASCAGHAH 53
>gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_E16 5', mRNA sequence
Length = 601
Score = 85.8 bits (181), Expect(3) = 5e-038
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+++G+GRTVCVTGAGGFIASWLVK LLEKGY V GTVRNP D
Sbjct: 125 VATGRGRTVCVTGAGGFIASWLVKLLLEKGYAVHGTVRNPDD 250
Score = 83.5 bits (176), Expect(3) = 5e-038
Identities = 38/80 (47%), Positives = 45/80 (56%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGT 464
+N HLR L+G +SL AF GC GVFH A PVTDDPE MIEPA+ GT
Sbjct: 257 RNAHLRGLEGAAERLTLFRVDLLDKESLVAAFRGCQGVFHTACPVTDDPEKMIEPAVSGT 436
Query: 465 RYVMAAADDAGVKRVVFTSS 524
R V+ AA + R V +S
Sbjct: 437 RNVINAAAEVDGIRRVVMTS 496
Score = 75.8 bits (159), Expect(2) = 2e-018
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +3 / +2
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCK 608
+ AAA+ G++RVV TSSIG +YM+P R P + D+TCWSDLE+CK
Sbjct: 446 INAAAEVDGIRRVVMTSSIGAIYMDPRRSPDEEADETCWSDLEFCK 583
Score = 68.4 bits (143), Expect(3) = 1e-028
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -2 / -2
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
S+GF TVP T *PFSRR LTS +AM PPAPVT TVRP P
Sbjct: 249 SSGFRTVPWTA*PFSRRSLTSHDAMKPPAPVTHTVRPRP 133
Score = 54.2 bits (112), Expect(3) = 1e-028
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = -2 / -2
Query: 607 LQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAI 473
LQ SRSLQ VSS G R G MY P++DV TTR P++SAAA+
Sbjct: 582 LQNSRSLQHVSSASSSGLRRGSMYMAPIDDVITTRRMPSTSAAAL 448
Score = 43.7 bits (89), Expect(3) = 5e-011
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = -2 / -2
Query: 517 VNTTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKASARL 362
+ T R S+AA IT VP SVTG A W TP P A+ RL
Sbjct: 489 ITTRRMPSTSAAALITFLVPLTAGSIIFSGSSVTGHAVWNTPWHPRNAATRL 334
Score = 42.3 bits (86), Expect(3) = 1e-028
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -1 / -1
Query: 452 RWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
R LDH R+IGD G+E A+ + E +AL VQQV EE + + + QV
Sbjct: 424 RRLDHFFRIIGDGTCGMEYALASSECSDEALLVQQVHPEEGQPLRRPFQASQV 266
Score = 40.0 bits (81), Expect(2) = 2e-018
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQE 271
R+H ++A QAPPGEGL PRH E
Sbjct: 169 RLHRVMAGQAPPGEGLRRPRHRPE 240
Score = 39.1 bits (79), Expect(3) = 5e-011
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
I R+PD A D VALLQE LD+P +E + + H +
Sbjct: 250 IIRIPDGAVDGVALLQEELDQP*RDEAAGARHTH 149
Score = 32.2 bits (64), Expect = 7.2
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 217 GSSSASWRRATQSAARSGTL 276
G SS+SWRRAT S A SG L
Sbjct: 186 GWSSSSWRRATPSTAPSGIL 245
Score = 27.6 bits (54), Expect(3) = 5e-038
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 551 P*PQQACGRHLLERPRVLQE 610
P P++ R +LERPRVLQ+
Sbjct: 526 PQPRRGGRRDMLERPRVLQD 585
Score = 22.1 bits (42), Expect(3) = 5e-011
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3 / -3
Query: 609 SCNTRGRSSRCR 574
SC TRGRS+ R
Sbjct: 584 SCRTRGRSNMSR 549
>gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F12f, mRNA sequence
Length = 697
Score = 78.5 bits (165), Expect(3) = 1e-037
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 337 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 516
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 517 LCRKGEDWYLLSKTRAEREAFAYAAKTG 600
Score = 69.3 bits (145), Expect(3) = 1e-037
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 148 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 321
Score = 47.8 bits (98), Expect(3) = 1e-037
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGAGGF+ASWLVK LL K +
Sbjct: 79 VCVTGAGGFVASWLVKLLLSKAH 147
Score = 35.4 bits (71), Expect(4) = 8e-013
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 321 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 142
Query: 239 LQE 231
L E
Sbjct: 141 LGE 133
Score = 35.0 bits (70), Expect(4) = 8e-013
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 566 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 387
Query: 469 *RVP 458
VP
Sbjct: 386 FSVP 375
Score = 34.5 bits (69), Expect(4) = 8e-013
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA PPAPVT T
Sbjct: 134 RRSLTSHEATKPPAPVTHT 78
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 320 TGLATWKTPSQPATADAML 264
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 159 ADSVVGLGEEELDEP*GDEASCAGHAH 79
Score = 22.6 bits (43), Expect(4) = 8e-013
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 778 VRYFITWSVLAFTVGC 731
+RY +LAFTVGC
Sbjct: 695 LRYLRRILLLAFTVGC 648
>gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 5', mRNA sequence
Length = 662
Score = 78.5 bits (165), Expect(3) = 1e-037
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 310 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 489
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 490 LCRKGEDWYLLSKTRAEREAFAYAAKTG 573
Score = 69.3 bits (145), Expect(3) = 1e-037
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 121 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 294
Score = 47.8 bits (98), Expect(3) = 1e-037
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGAGGF+ASWLVK LL K +
Sbjct: 52 VCVTGAGGFVASWLVKLLLSKAH 120
Score = 35.4 bits (71), Expect(3) = 5e-011
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 294 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 115
Query: 239 LQE 231
L E
Sbjct: 114 LGE 106
Score = 35.0 bits (70), Expect(3) = 5e-011
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -1
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 539 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 360
Query: 469 *RVP 458
VP
Sbjct: 359 FSVP 348
Score = 34.5 bits (69), Expect(3) = 5e-011
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA PPAPVT T
Sbjct: 107 RRSLTSHEATKPPAPVTHT 51
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 293 TGLATWKTPSQPATADAML 237
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 132 ADSVVGLGEEELDEP*GDEASCAGHAH 52
>gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 5', mRNA sequence
Length = 663
Score = 78.5 bits (165), Expect(3) = 1e-037
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 328 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 507
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 508 LCRKGEDWYLLSKTRAEREAFAYAAKTG 591
Score = 69.3 bits (145), Expect(3) = 1e-037
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 139 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 312
Score = 47.8 bits (98), Expect(3) = 1e-037
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGAGGF+ASWLVK LL K +
Sbjct: 70 VCVTGAGGFVASWLVKLLLSKAH 138
Score = 35.4 bits (71), Expect(3) = 5e-011
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 312 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 133
Query: 239 LQE 231
L E
Sbjct: 132 LGE 124
Score = 35.0 bits (70), Expect(3) = 5e-011
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -2
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 557 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 378
Query: 469 *RVP 458
VP
Sbjct: 377 FSVP 366
Score = 34.5 bits (69), Expect(3) = 5e-011
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA PPAPVT T
Sbjct: 125 RRSLTSHEATKPPAPVTHT 69
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 311 TGLATWKTPSQPATADAML 255
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 150 ADSVVGLGEEELDEP*GDEASCAGHAH 70
>gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04A23T 5',
mRNA sequence
Length = 619
Score = 78.5 bits (165), Expect(3) = 1e-037
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3 / +2
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 275 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 454
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 455 LCRKGEDWYLLSKTRAEREAFAYAAKTG 538
Score = 69.3 bits (145), Expect(3) = 1e-037
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +2
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 86 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 259
Score = 47.8 bits (98), Expect(3) = 1e-037
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGAGGF+ASWLVK LL K +
Sbjct: 17 VCVTGAGGFVASWLVKLLLSKAH 85
Score = 35.4 bits (71), Expect(3) = 5e-011
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 259 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 80
Query: 239 LQE 231
L E
Sbjct: 79 LGE 71
Score = 35.0 bits (70), Expect(3) = 5e-011
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -2
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 504 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 325
Query: 469 *RVP 458
VP
Sbjct: 324 FSVP 313
Score = 34.5 bits (69), Expect(3) = 5e-011
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA PPAPVT T
Sbjct: 72 RRSLTSHEATKPPAPVTHT 16
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 258 TGLATWKTPSQPATADAML 202
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 97 ADSVVGLGEEELDEP*GDEASCAGHAH 17
>gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB01C06_T3.ab1 similar to Aldehyde reductase,Hydrogen
dehydrogenase,Alcohol dehydrogenase,Cinnamyl-alcohol
dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,Cinnamoyl-CoA reductase,Transferred entry:
1.18.99.1,Carbonyl reductase (NADPH),Dihydrokaempferol
4-reductase,, mRNA sequence
Length = 847
Score = 79.9 bits (168), Expect(4) = 3e-037
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 61 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 192
Score = 56.1 bits (116), Expect(3) = 5e-017
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 194 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 66
Score = 55.6 bits (115), Expect(4) = 3e-037
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3 / +1
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+V +S Y R P VD+T +S E C+ + WY +KT+AE+ AW+ A+ G
Sbjct: 430 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNG 606
Score = 47.8 bits (98), Expect(4) = 3e-037
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHA 875
N S + ++K + GS++TY + +V+V+DVA AH+ YE P A
Sbjct: 667 NTSAEAILKXINGSSSTYAHFCFGWVNVKDVALAHILAYEDPSA 798
Score = 46.0 bits (94), Expect(3) = 5e-017
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -2 / -3
Query: 874 AWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
A G+SY R CA ATSLT T+ + V DP F S L F+VGC
Sbjct: 797 AEGSSYARICARATSLTFTHPKQKWAYVEDDPFIXFNIASALVFSVGC 654
Score = 40.5 bits (82), Expect(2) = 1e-006
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 337 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 507
Score = 40.0 bits (81), Expect(2) = 1e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 192 LGVGGVPDGGADSVAAVEEELDEPGGDVARGAGDAH 85
Score = 35.9 bits (72), Expect(2) = 1e-006
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 108 LHRLLARQAPPPPRLHCPRH 167
Score = 29.5 bits (58), Expect(2) = 1e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 312 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 202
Score = 29.5 bits (58), Expect(3) = 5e-017
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 323 GEAVWKTQSQPAMAASKV 270
Score = 28.6 bits (56), Expect(4) = 3e-037
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 283 AIAGCDCVFHTASP 324
>gb|BM444997.2|BM444997 EBem09_SQ007_C03_R embryo, 1 Day germination, no treatment, cv Optic,
EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ007_C03 5', mRNA sequence
Length = 322
Score = 124 bits (265), Expect(3) = 3e-037
Identities = 47/53 (88%), Positives = 51/53 (96%)
Frame = +3 / +1
Query: 900 STLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+TLHRG+LCRVL KLFPEYPVPTKCKD+VNPPV GYKFTNQRLKDLGM+FVPV
Sbjct: 25 TTLHRGELCRVLGKLFPEYPVPTKCKDEVNPPVKGYKFTNQRLKDLGMEFVPV 183
Score = 103 bits (219), Expect(3) = 3e-028
Identities = 44/53 (83%), Positives = 45/53 (84%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVL 899
TGT SIPRSLSLWLVNLYP TGG T SLHLVGTGYSGKSL RTRQ SPR V+
Sbjct: 182 TGTNSIPRSLSLWLVNLYPFTGGFTSSLHLVGTGYSGKSLPRTRQSSPRWSVV 24
Score = 94.1 bits (199), Expect(2) = 9e-020
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = -1 / -2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQ 906
RHE+HPQ+LEPLV ELV +HR V+LVLALGGYG+L EEL EDAAE+AAV+
Sbjct: 180 RHELHPQVLEPLVSELVPFHRWVHLVLALGGYGILGEELAEDAAELAAVE 31
Score = 64.3 bits (134), Expect(2) = 8e-014
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2 / +3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
V RTHQVQG G P+G R+QVH PEAQG GDG+RAG
Sbjct: 78 VSRTHQVQGRGEPTGERVQVH*PEAQGPGDGVRAG 182
Score = 46.4 bits (95), Expect(3) = 3e-037
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +2 / +1
Query: 1058 LQCLYETVTSLQEKGMLPVLPTKQD 1132
LQ +YETV SLQEKGMLPVLP D
Sbjct: 184 LQSIYETVKSLQEKGMLPVLPPSDD 258
Score = 40.0 bits (81), Expect = 0.033
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 1006 TSSPTRGSRIWGWTSCR 1056
TSS TRGSR WGW+SCR
Sbjct: 131 TSSLTRGSRTWGWSSCR 181
Score = 38.6 bits (78), Expect = 0.085
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / -1
Query: 1020 GW*TCILPPEG*PGPCTWWV 961
G *TC L P G P PCTWWV
Sbjct: 145 G**TCTLSPVGSPRPCTWWV 86
Score = 37.3 bits (75), Expect(3) = 3e-028
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -3 / -3
Query: 1119 GSTGSMPFSWRLVTVS 1072
GSTGS+PFSWRL TVS
Sbjct: 245 GSTGSIPFSWRLFTVS 198
Score = 35.9 bits (72), Expect = 0.57
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = -2 / -2
Query: 1114 HGQHAFLLEAGDRLVEALQTGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLA 935
H QH FLLEA RLV LQ + P+ L + L P + L L G G G+ LA
Sbjct: 240 HRQHPFLLEALHRLVYTLQHRHELHPQVLEPLVSELVPFHRWVHLVLALGGYGILGEELA 61
Score = 33.1 bits (66), Expect(2) = 8e-014
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1 / +3
Query: 1069 LRDGHQPPGERHAARASDKTR 1131
+RDG +PPGER AA A+ K R
Sbjct: 195 IRDGEEPPGERDAAGATTK*R 257
Score = 23.5 bits (45), Expect(3) = 3e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 917 AAVQGALGADVAA 879
A +GALGADVAA
Sbjct: 39 AVERGALGADVAA 1
Score = 23.5 bits (45), Expect(2) = 9e-020
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 1115 ARAACLSPGGW*PSR 1071
A AA LSPGG PSR
Sbjct: 241 APAASLSPGGSSPSR 197
Score = 23.5 bits (45), Expect(3) = 3e-037
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +1
Query: 879 GRYICAEST 905
GRYICAE T
Sbjct: 1 GRYICAEGT 27
>gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002I06f, mRNA sequence
Length = 757
Score = 79.9 bits (168), Expect(3) = 4e-036
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALD 311
R VCVTG GGFIASWLVK LL +GY V TVR+P DPK+ HL+ +D
Sbjct: 73 RRVCVTGGGGFIASWLVKLLLSRGYAVNATVRDPSDPKSVHLKQMD 210
Score = 72.1 bits (151), Expect(3) = 4e-036
Identities = 30/89 (33%), Positives = 48/89 (53%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
+ D ++ PA +GT V+ A V++V+ SS V NP K D++CWSD
Sbjct: 331 IGDPESEVLAPAGKGTSNVLKACSAMKVQKVIGLSSTAAVDFNPNWPQDKLKDESCWSDK 510
Query: 597 EYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
++C+ ++W AK VAEQ ++ + K G
Sbjct: 511 DFCQKNEDWCSVAKIVAEQASFRYSEKNG 597
Score = 55.6 bits (115), Expect = 7e-007
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = -1 / -2
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALL 237
R G VED +T + + + V+ VG E+ + + G V +V L + V D D VA
Sbjct: 315 RSGEVEDPLTPLKRTCQRVVVEHVGPEQVQILPGLVHLLEVDTLGVTWVADGGVDGVAAG 136
Query: 236 QEALDEPGGNEPSSSGHAN 180
+E LDEP G+EP+S+G A+
Sbjct: 135 EEQLDEPRGDEPASAGDAH 79
Score = 53.8 bits (111), Expect(2) = 3e-009
Identities = 24/41 (58%), Positives = 25/41 (60%)
Frame = -2 / -3
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVR 173
W+ GS G TV T *P R LTS EAMNPP PVT T R
Sbjct: 194 WTLLGSLGSRTVALTA*PRERSSLTSHEAMNPPPPVTHTRR 72
Score = 38.6 bits (78), Expect(3) = 4e-036
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
+L AF GC+GVFH A+PV +D
Sbjct: 262 TLTRAFEGCEGVFHLATPVPED 327
Score = 28.1 bits (55), Expect(2) = 3e-009
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKA 374
TG A WKTPS P A
Sbjct: 317 TGVARWKTPSHPSNA 273
>gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. vulgare cDNA clone HX10G17
5-PRIME, mRNA sequence
Length = 622
Score = 71.2 bits (149), Expect(3) = 6e-036
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GCDGVFH ASPV
Sbjct: 223 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLNYDSIASAVAGCDGVFHVASPV 396
Score = 64.8 bits (135), Expect(3) = 6e-036
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A +A VKRVV SS+ V NP K D+ WSD +
Sbjct: 412 TNPEEEVIAPAVTGTLNVLKACYEAKVKRVVMVSSVAAVSNNPNWPKGKFFDEDSWSDED 591
Query: 600 YCKNTQNWY 626
C+ ++WY
Sbjct: 592 LCRKGEDWY 618
Score = 54.2 bits (112), Expect(3) = 6e-036
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGY 248
+TVCVTGAGGFIASWLVK LL KG+
Sbjct: 148 KTVCVTGAGGFIASWLVKLLLSKGH 222
Score = 42.3 bits (86), Expect(3) = 2e-012
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RR LTS EAM PPAPVT TV
Sbjct: 218 PLERRSLTSHEAMKPPAPVTHTV 150
Score = 35.0 bits (70), Expect(3) = 2e-012
Identities = 25/57 (43%), Positives = 28/57 (49%)
Frame = -2 / -3
Query: 628 QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
+YQ FLQ S S Q SS L + G + T ED TTR T AS A T VP
Sbjct: 620 KYQSSPFLQRSSSDQLSSSKNLPLGQLGLLDTAATEDTMTTRLTFAS*QAFKTFSVP 450
Score = 32.7 bits (65), Expect(3) = 2e-012
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 395 TGLATWKTPSQPATADAML 339
Score = 31.8 bits (63), Expect(2) = 0.002
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEE 333
DR +ED +TA A+ VQQVGAE+
Sbjct: 396 DRASNMEDPITASNR*RNAVVVQQVGAEQ 310
Score = 29.9 bits (59), Expect(2) = 0.002
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1 / -2
Query: 248 VALLQEALDEPGGNEPSSSGHAN 180
V+L +E LDEP G+E S + HA+
Sbjct: 222 VSLGEEELDEPRGDEASCASHAH 154
>gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. vulgare cDNA clone HU08J12
5-PRIME, mRNA sequence
Length = 511
Score = 72.1 bits (151), Expect(3) = 1e-035
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 277 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 456
Query: 600 YCKNTQNWYCYAKTVAEQ 653
C+ ++WY +KT AE+
Sbjct: 457 LCRKGEDWYLLSKTRAER 510
Score = 69.3 bits (145), Expect(3) = 1e-035
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 88 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 261
Score = 47.8 bits (98), Expect(3) = 1e-035
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGAGGF+ASWLVK LL K +
Sbjct: 19 VCVTGAGGFVASWLVKLLLSKAH 87
Score = 35.4 bits (71), Expect(3) = 5e-011
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 261 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 82
Query: 239 LQE 231
L E
Sbjct: 81 LGE 73
Score = 35.0 bits (70), Expect(3) = 5e-011
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 506 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 327
Query: 469 *RVP 458
VP
Sbjct: 326 FSVP 315
Score = 34.5 bits (69), Expect(3) = 5e-011
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -3
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA PPAPVT T
Sbjct: 74 RRSLTSHEATKPPAPVTHT 18
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 260 TGLATWKTPSQPATADAML 204
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 99 ADSVVGLGEEELDEP*GDEASCAGHAH 19
>gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100H17f, mRNA sequence
Length = 505
Score = 69.3 bits (145), Expect(3) = 3e-035
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 91 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 264
Score = 68.9 bits (144), Expect(3) = 3e-035
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 280 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 459
Query: 600 YCKNTQNWYCYAKT 641
C+ ++WY +KT
Sbjct: 460 LCRKGEDWYLLSKT 501
Score = 49.6 bits (102), Expect(3) = 3e-035
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGY 248
G+ VCVTGAGGF+ASWLVK LL K +
Sbjct: 7 GEEDVVCVTGAGGFVASWLVKLLLSKAH 90
Score = 36.3 bits (73), Expect(3) = 1e-010
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = -2 / -3
Query: 235 RRRLTSQEAMNPPAPVTQTVRPCP 164
RR LTS EA PPAPVT T P
Sbjct: 77 RRSLTSHEATKPPAPVTHTTSSSP 6
Score = 35.4 bits (71), Expect(3) = 1e-010
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 264 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 85
Query: 239 LQE 231
L E
Sbjct: 84 LGE 76
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 263 TGLATWKTPSQPATADAML 207
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 102 ADSVVGLGEEELDEP*GDEASCAGHAH 22
Score = 31.8 bits (63), Expect(3) = 1e-010
Identities = 25/61 (40%), Positives = 28/61 (45%)
Frame = -2 / -3
Query: 640 VLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RV 461
VL +YQ FL S S Q S L + G + T ED TTR T AS A T V
Sbjct: 500 VLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSV 321
Query: 460 P 458
P
Sbjct: 320 P 318
>gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092C03f, mRNA sequence
Length = 975
Score = 82.2 bits (173), Expect(3) = 4e-035
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALD 311
R VCVTG GGFIASWLVK LL +GY V TVR+P DPKN HL+ +D
Sbjct: 73 RRVCVTGGGGFIASWLVKLLLSRGYAVNATVRDPSDPKNVHLKQMD 210
Score = 66.6 bits (139), Expect(3) = 4e-035
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
+ D ++ PA++GT V+ A V++V+ SS V NP K D++CWSD
Sbjct: 331 IVDPESEVLAPAVKGTSNVLKACSAMKVQKVIVLSSTAAVDFNPNWPQDKLKDESCWSDK 510
Query: 597 EYCKNTQNWYCYAKTVAEQ 653
++C+ ++W AK VA +
Sbjct: 511 DFCQKNEDWVFCAKIVANR 567
Score = 56.5 bits (117), Expect(2) = 5e-010
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -2 / -2
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVR 173
W+F GS G TV T *P R LTS EAMNPP PVT T R
Sbjct: 194 WTFLGSLGSRTVALTA*PRERSSLTSHEAMNPPPPVTHTRR 72
Score = 55.6 bits (115), Expect = 7e-007
Identities = 29/79 (36%), Positives = 46/79 (58%)
Frame = -1 / -1
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALL 237
R G VED +T + + + V+ VG E+ + + G V +V +L + V D D VA
Sbjct: 315 RSGEVEDPLTPLKRTCQRVVVEHVGPEQVQILPGLVHLLEVDILGVTWVADGGVDGVAAG 136
Query: 236 QEALDEPGGNEPSSSGHAN 180
+E LDEP G+EP+++G A+
Sbjct: 135 EEQLDEPRGDEPAAAGDAH 79
Score = 38.6 bits (78), Expect(3) = 4e-035
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
+L AF GC+GVFH A+PV +D
Sbjct: 262 TLTRAFEGCEGVFHLATPVPED 327
Score = 28.1 bits (55), Expect(2) = 5e-010
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKA 374
TG A WKTPS P A
Sbjct: 317 TGVARWKTPSHPSNA 273
>gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ006_N19 5', mRNA sequence
Length = 546
Score = 85.8 bits (181), Expect(3) = 4e-035
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+++G+GRTVCVTGAGGFIASWLVK LLEKGY V GTVRNP D
Sbjct: 141 VATGRGRTVCVTGAGGFIASWLVKLLLEKGYAVHGTVRNPDD 266
Score = 68.4 bits (143), Expect(3) = 5e-021
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
S+GF TVP T *PFSRR LTS +AM PPAPVT TVRP P
Sbjct: 265 SSGFRTVPWTA*PFSRRSLTSHDAMKPPAPVTHTVRPRP 149
Score = 59.3 bits (123), Expect(3) = 4e-035
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDPE 434
+N HLR L+G +SL AF GC GVFH A PVTDDPE
Sbjct: 273 RNAHLRGLEGAAERLTLFRVDLLDKESLVAAFRGCQGVFHTACPVTDDPE 422
Score = 42.3 bits (86), Expect(3) = 4e-035
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3 / +1
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYR 554
+ AAA+ G++RVV TSSIG VYM+P R
Sbjct: 463 INAAAEVGGIRRVVMTSSIGAVYMDPRR 546
Score = 40.0 bits (81), Expect(2) = 3e-005
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQE 271
R+H ++A QAPPGEGL PRH E
Sbjct: 185 RLHRVMAGQAPPGEGLRRPRHRPE 256
Score = 39.1 bits (79), Expect(2) = 1e-005
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
I R+PD A D VALLQE LD+P +E + + H +
Sbjct: 266 IIRIPDGAVDGVALLQEELDQP*RDEAAGARHTH 165
Score = 37.3 bits (75), Expect(3) = 5e-021
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = -2 / -2
Query: 553 R*GFMYTVPMEDVNTTRFTPASSAAAI 473
R G MYT P++DV TTR P +SAAA+
Sbjct: 545 RRGSMYTAPIDDVITTRRMPPTSAAAL 465
Score = 33.6 bits (67), Expect(3) = 5e-021
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -1 / -2
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
R+IGD G+E A+ + E +AL VQQV EE + + + QV
Sbjct: 419 RIIGDGTCGMEYALASSECSDEALLVQQVHPEEGQPLRRPFQASQV 282
Score = 32.2 bits (64), Expect = 7.2
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1 / +1
Query: 217 GSSSASWRRATQSAARSGTL 276
G SS+SWRRAT S A SG L
Sbjct: 202 GWSSSSWRRATPSTAPSGIL 261
Score = 30.9 bits (61), Expect(2) = 3e-005
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
MIEPA+ GTR V+ AA + G R V +S
Sbjct: 427 MIEPAVSGTRNVINAAAEVGGIRRVVMTS 513
Score = 30.4 bits (60), Expect(2) = 1e-005
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKASARL 362
VTG A W TP P A+ RL
Sbjct: 409 VTGHAVWNTPWHPRNAATRL 350
>gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014O07f, mRNA sequence
Length = 821
Score = 101 bits (216), Expect(3) = 2e-034
Identities = 43/90 (47%), Positives = 54/90 (60%)
Frame = +3 / +2
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXX 338
++G G+TVCVTGAGG+IASWLVK LL +GY V GTVR+ K HLR L+
Sbjct: 59 NAGSGKTVCVTGAGGYIASWLVKLLLSRGYAVHGTVRHLGVEKTGHLRRLENASENLRLF 238
Query: 339 XXXXXXPQSLAEAFSGCDGVFHAASPVTDD 428
++A A GC GVFH A+PV +
Sbjct: 239 KADLLDYDAMAAAIVGCQGVFHVATPVPSE 328
Score = 57.0 bits (118), Expect(2) = 9e-010
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = -2 / -3
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
W F + + TVP T *P RR TS EAM PPAPVT TV P P
Sbjct: 195 WPVFSTPRWRTVPWTA*PRERRSFTSHEAMYPPAPVTHTVFPLP 64
Score = 51.0 bits (105), Expect(3) = 2e-034
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3 / +1
Query: 573 DDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
D++CWSD E+C++ Q+WY AK AE A E R+
Sbjct: 619 DESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRE 723
Score = 37.7 bits (76), Expect(3) = 2e-034
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
M+ PA+ GT V+ AA A RVV SS+ V +NP P + D
Sbjct: 481 MLGPAVSGTTNVLKAASAANAVRVVVVSSMVAVEINPKDWPQGKIRD 621
Score = 33.6 bits (67), Expect(2) = 0.44
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+AR+APP L PRH P
Sbjct: 100 RVHRLVAREAPPLPRLRRPRHRPPP 174
Score = 26.7 bits (52), Expect(2) = 9e-010
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASA 368
TG A WKTP P A+A
Sbjct: 318 TGVATWKTPWHPTMAAA 268
Score = 23.5 bits (45), Expect(2) = 0.44
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 581 LLERPRVLQEHPELV 625
LL R+LQE PELV
Sbjct: 627 LLVGQRILQEQPELV 671
>gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014P07f, mRNA sequence
Length = 821
Score = 101 bits (216), Expect(3) = 2e-034
Identities = 43/90 (47%), Positives = 54/90 (60%)
Frame = +3 / +2
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXX 338
++G G+TVCVTGAGG+IASWLVK LL +GY V GTVR+ K HLR L+
Sbjct: 59 NAGSGKTVCVTGAGGYIASWLVKLLLSRGYAVHGTVRHLGVEKTGHLRRLENASENLRLF 238
Query: 339 XXXXXXPQSLAEAFSGCDGVFHAASPVTDD 428
++A A GC GVFH A+PV +
Sbjct: 239 KADLLDYDAMAAAIVGCQGVFHVATPVPSE 328
Score = 57.0 bits (118), Expect(2) = 9e-010
Identities = 25/44 (56%), Positives = 27/44 (61%)
Frame = -2 / -3
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
W F + + TVP T *P RR TS EAM PPAPVT TV P P
Sbjct: 195 WPVFSTPRWRTVPWTA*PRERRSFTSHEAMYPPAPVTHTVFPLP 64
Score = 51.0 bits (105), Expect(3) = 2e-034
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3 / +1
Query: 573 DDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
D++CWSD E+C++ Q+WY AK AE A E R+
Sbjct: 619 DESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRE 723
Score = 37.7 bits (76), Expect(3) = 2e-034
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
M+ PA+ GT V+ AA A RVV SS+ V +NP P + D
Sbjct: 481 MLGPAVSGTTNVLKAASAANAVRVVVVSSMVAVEINPKDWPQGKIRD 621
Score = 33.6 bits (67), Expect(2) = 0.44
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+AR+APP L PRH P
Sbjct: 100 RVHRLVAREAPPLPRLRRPRHRPPP 174
Score = 26.7 bits (52), Expect(2) = 9e-010
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASA 368
TG A WKTP P A+A
Sbjct: 318 TGVATWKTPWHPTMAAA 268
Score = 23.5 bits (45), Expect(2) = 0.44
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 581 LLERPRVLQEHPELV 625
LL R+LQE PELV
Sbjct: 627 LLVGQRILQEQPELV 671
>gb|BI948507.1|BI948507 HVSMEl0009O08f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0009O08f, mRNA sequence
Length = 1042
Score = 105 bits (224), Expect(2) = 3e-034
Identities = 47/92 (51%), Positives = 52/92 (56%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTG GGFIASWLVK LL +GY V TVR+P D KN HL LDG
Sbjct: 81 VCVTGGGGFIASWLVKLLLSRGYAVHTTVRDPCDQKNAHLMQLDGAAESLSLFKADMLDR 260
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAI 455
+LA A +GC GVFH SPV D + E I
Sbjct: 261 AALAAAAAGCQGVFHVTSPVPADKTVYPESEI 356
Score = 61.6 bits (128), Expect(2) = 8e-012
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = -1 / -3
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVA 243
G+RGG +EDA+ G G G+ V+ VG E+ + V+ Q+ VL + V D D VA
Sbjct: 323 GNRGGDMEDALATGGGGGERGAVEHVGLEQAQAFRRPVQLHQMRVLLVTWVADGGVDGVA 144
Query: 242 LLQEALDEPGGNEPSSSGHAN 180
+E LDEP +E +++GHA+
Sbjct: 143 PGEEQLDEPRCDESAATGHAH 81
Score = 60.6 bits (126), Expect(2) = 3e-034
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3 / +3
Query: 447 PAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
PA++GT ++ V++VV SS V+ NP KP D++ W+D + C + Y
Sbjct: 363 PAVKGTLNILEVGASLKVQKVVVVSSTADVHYNPNWPWGKPKDESFWADKKICMEKEALY 542
Query: 627 CYAKTVAEQ 653
+AKTVAE+
Sbjct: 543 TFAKTVAEE 569
Score = 46.9 bits (96), Expect(2) = 7e-008
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+FF S G TV T *P R LTS +AMNPP PVT T
Sbjct: 193 AFFWSHGSRTVVWTA*PRERSSLTSHDAMNPPPPVTHT 80
Score = 31.8 bits (63), Expect = 9.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H ++ARQA P GL P H P
Sbjct: 101 RIHRIVARQAAPLPGLRRPHHRPRP 175
Score = 30.4 bits (60), Expect(2) = 7e-008
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASA 368
TGE WKTP QP A+A
Sbjct: 319 TGEVTWKTPWQPAAAAA 269
Score = 29.0 bits (57), Expect(2) = 8e-012
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -2 / -1
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTT 506
SATVLA Y+ + S Q++SS GL + G T +ED TT
Sbjct: 565 SATVLAKVYKASFSMHIFLSAQKLSSLGLPQGQLGL**TSAVEDTTTT 422
>gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017M21f, mRNA sequence
Length = 646
Score = 130 bits (279), Expect(2) = 3e-034
Identities = 58/111 (52%), Positives = 71/111 (63%)
Frame = +3 / +3
Query: 192 GAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLA 371
GAGG++ +VK LL+KGY VRGTVRNP D KN HLRAL G +L
Sbjct: 3 GAGGYMGWGVVKLLLDKGYAVRGTVRNPDDAKNAHLRALAGAAERLVLCKADLLDGDALR 182
Query: 372 EAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
A +GC GVFH ASPVTDDPE M+EPA+RGT ++ AA ++G R V +S
Sbjct: 183 GAIAGCHGVFHTASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTS 335
Score = 100 bits (212), Expect(2) = 7e-024
Identities = 41/93 (44%), Positives = 53/93 (56%)
Frame = +3 / +3
Query: 405 AASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTC 584
A+ D EM+ + AAA+ V+RVV TSSIG + M+P R VD++C
Sbjct: 219 ASPVTDDPEEMVEPAVRGTLNIIDAAAESGTVRRVVLTSSIGAIAMDPNRGADAVVDESC 398
Query: 585 WSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
WSDLE+CK T+NWYCY K A + AW A G
Sbjct: 399 WSDLEFCKKTKNWYCYGKAAAXRAAWXAAPXXG 497
Score = 81.7 bits (172), Expect(3) = 3e-030
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = -1 / -3
Query: 458 PDRWLDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWI 279
P R L H LR++GDR GVEDAV AG+G + + V+QVG + + + A + PQV VL +
Sbjct: 269 PHRRLHHLLRIVGDRRRGVEDAVAAGDGSAQRVAVEQVGLAQHQPLRRAGESPQVRVLRV 90
Query: 278 HRVPDRAADCVALLQEALDEP 216
VPD A+ V L++E LD+P
Sbjct: 89 IGVPDGASHGVPLVEEELDDP 27
Score = 70.3 bits (147), Expect(3) = 3e-030
Identities = 37/62 (59%), Positives = 39/62 (62%)
Frame = -2 / -1
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSA 482
HA SA *QYQF VFLQ SRSLQQ SST R G M PM+DV+TTR T SA
Sbjct: 475 HAARSAAAFP*QYQFLVFLQNSRSLQQDSSTTASAPRLGSMAIAPMDDVSTTRRTVPDSA 296
Query: 481 AA 476
AA
Sbjct: 295 AA 290
Score = 53.3 bits (110), Expect(3) = 4e-016
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAP 191
+FF S+GFLTVPRT P SRR LT+ M PPAP
Sbjct: 103 AFFASSGFLTVPRTAYPLSRRSLTTPHPM*PPAP 2
Score = 42.8 bits (87), Expect(3) = 4e-016
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2 / -1
Query: 511 TTRFTPASSAAAIT*RVPRXXXXXXXXXXSVTGEAAWKTPSQPEKA 374
T R P S+AA++ VP SVTG+A WKTP QP A
Sbjct: 322 TRRTVPDSAAASMMLSVPLTAGSTISSGSSVTGDAVWKTPWQPAMA 185
Score = 35.4 bits (71), Expect(2) = 3e-034
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2 / +2
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLL 631
P P ++ R LLERPRVLQE ELVLL
Sbjct: 359 PQPRRRRRRRRVLLERPRVLQEDQELVLL 445
Score = 34.5 bits (69), Expect(2) = 7e-024
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H + RQAPP +G+ RH QEP
Sbjct: 11 RLHGVGGRQAPPRQGVRRARHRQEP 85
Score = 26.3 bits (51), Expect(3) = 4e-016
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 609 SCNTRGRSSRCR 574
SC TRGRSSR R
Sbjct: 423 SCRTRGRSSRTR 388
Score = 24.0 bits (46), Expect(3) = 3e-030
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / -1
Query: 1002 LPPEG*PGPC 973
+PP G PGPC
Sbjct: 559 VPPRGRPGPC 530
>gb|BF254781.2|BF254781 HVSMEf0005A11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0005A11f, mRNA sequence
Length = 586
Score = 131 bits (281), Expect(2) = 8e-034
Identities = 50/83 (60%), Positives = 63/83 (75%)
Frame = +3 / -1
Query: 810 QAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVN 989
QAYV +RD + AH+ +EAP A GRY+CAE LHR D+ +LAKLFPEYPVPT+C D+VN
Sbjct: 523 QAYVTLRDFSGAHIGFFEAPQASGRYLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVN 344
Query: 990 PPVVGYKFTNQRLKDLGMDFVPV 1058
P YK +NQ+L+DLG+ F PV
Sbjct: 343 PRKQPYKMSNQKLQDLGLKFTPV 275
Score = 93.2 bits (197), Expect(2) = 2e-021
Identities = 47/86 (54%), Positives = 48/86 (55%)
Frame = -2 / +3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG PRS S WL L G T S HLVGTGYSGKSLAR S RCR SA *RP
Sbjct: 276 TGVNLRPRSCSFWLDIL*GCLRGFTSSEHLVGTGYSGKSLARMWTTSWRCRTRSAHR*RP 455
Query: 877 CAWGASYTRTCASATSLTCTYACAAF 800
AWGAS CA S TYAC +
Sbjct: 456 EAWGASKNPMCAPEKSRNVTYACTGW 533
Score = 74.8 bits (157), Expect = 1e-012
Identities = 41/71 (57%), Positives = 47/71 (66%)
Frame = -1 / +2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ +IL+ LVG LV RV+LV A GVL EELGED +V AVQ ALGA VAA
Sbjct: 278 RSELEAKILQLLVGHLVRLLTRVHLVRAPCWDGVLGEELGEDVDDVLAVQDALGA*VAAG 457
Query: 875 RVGRLVHPDVR 843
+GRL PDVR
Sbjct: 458 GLGRLKEPDVR 490
Score = 33.1 bits (66), Expect(2) = 8e-034
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 1067 LYETVTSLQEKGMLPV 1114
LYETV SLQEKG LPV
Sbjct: 265 LYETVKSLQEKGHLPV 218
Score = 29.9 bits (59), Expect(2) = 2e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3 / +3
Query: 1113 TGSMPFSWRLVTVS*R 1066
TG PFSWRL TVS R
Sbjct: 219 TGRCPFSWRLFTVSYR 266
Score = 26.7 bits (52), Expect(2) = 3.0
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2 / -3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGS 1036
VPR ++V G PS +Q QPEA GS
Sbjct: 380 VPRPNKVL*RGEPS*AALQDVQPEAAGS 297
Score = 24.0 bits (46), Expect(2) = 3.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1 / -3
Query: 1036 WGWTSCRSAVPLRDGHQPPGE 1098
W + +RDG +PPGE
Sbjct: 296 WPQVHSCERLSVRDGEEPPGE 234
>gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 5', mRNA sequence
Length = 514
Score = 69.3 bits (145), Expect(3) = 2e-033
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +2
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 113 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 286
Score = 64.8 bits (135), Expect(3) = 2e-033
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +3 / +2
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 302 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 481
Query: 600 YCKNTQNWY 626
C+ ++WY
Sbjct: 482 LCRKGEDWY 508
Score = 47.8 bits (98), Expect(3) = 2e-033
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGAGGF+ASWLVK LL K +
Sbjct: 44 VCVTGAGGFVASWLVKLLLSKAH 112
Score = 35.4 bits (71), Expect(3) = 1e-009
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 286 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 107
Query: 239 LQE 231
L E
Sbjct: 106 LGE 98
Score = 34.5 bits (69), Expect(3) = 1e-009
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA PPAPVT T
Sbjct: 99 RRSLTSHEATKPPAPVTHT 43
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 285 TGLATWKTPSQPATADAML 229
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 124 ADSVVGLGEEELDEP*GDEASCAGHAH 44
Score = 30.4 bits (60), Expect(3) = 1e-009
Identities = 23/57 (40%), Positives = 26/57 (45%)
Frame = -2 / -2
Query: 628 QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
+YQ FL S S Q S L + G + T ED TTR T AS A T VP
Sbjct: 510 KYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVP 340
>gb|CA015399.1|CA015399 HT14D04r HT Hordeum vulgare subsp. vulgare cDNA clone HT14D04
5-PRIME, mRNA sequence
Length = 576
Score = 116 bits (249), Expect(2) = 2e-033
Identities = 51/103 (49%), Positives = 61/103 (59%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 167 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTMCRADVLDY 346
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
L AF GC GVFH ASPV++DP+++ + AAAD
Sbjct: 347 DGLGAAFHGCHGVFHVASPVSNDPDLVPVAVEGTRNVIRAAAD 475
Score = 71.6 bits (150), Expect(2) = 1e-016
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1 / -3
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+GDR G V+DAV A EG +A+ V+ VGA E + ++G QV VL + +
Sbjct: 427 HEVGVVGDRRGDVKDAVAAVEGGAEAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGG 248
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
++D VA +E L PG +E S + HA+
Sbjct: 247 SSDAVAAEEELLHHPGADEASRTRHAD 167
Score = 46.9 bits (96), Expect(2) = 2e-033
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3 / +3
Query: 504 RVVFTSSIGTVYMNPYRDPSKPVDDTCWS 590
RVVFTSS G V+M+P R P +D+ CWS
Sbjct: 489 RVVFTSSYGAVHMDPNRSPDAVLDEACWS 575
Score = 45.5 bits (93), Expect(2) = 1e-006
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 279 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 166
Score = 35.4 bits (71), Expect(2) = 1e-016
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -2 / -3
Query: 589 LQQVSSTGLLGSR*GFMYTVPMEDVNTTR 503
LQQ SS+ G R G M T P +DVNTTR
Sbjct: 574 LQQASSSTASGLRLGSMCTAP*DDVNTTR 488
Score = 27.2 bits (53), Expect(2) = 1e-006
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA KTP QP KA+ R
Sbjct: 405 TGEAT*KTPWQPWKAAPR 352
>gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 5', mRNA sequence
Length = 518
Score = 78.5 bits (165), Expect(3) = 3e-033
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3 / +2
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 251 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 430
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 431 LCRKGEDWYLLSKTRAEREAFAYAAKTG 514
Score = 69.3 bits (145), Expect(3) = 3e-033
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +2
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 62 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 235
Score = 35.4 bits (71), Expect(3) = 6e-008
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 235 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 56
Query: 239 LQE 231
L E
Sbjct: 55 LGE 47
Score = 35.0 bits (70), Expect(3) = 6e-008
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 480 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 301
Query: 469 *RVP 458
VP
Sbjct: 300 FSVP 289
Score = 33.1 bits (66), Expect(3) = 3e-033
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 198 GGFIASWLVKRLLEKGY 248
GGF+ASWLVK LL K +
Sbjct: 11 GGFVASWLVKLLLSKAH 61
Score = 32.7 bits (65), Expect(2) = 1.7
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 234 TGLATWKTPSQPATADAML 178
Score = 23.5 bits (45), Expect(3) = 6e-008
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2 / -3
Query: 235 RRRLTSQEAMNPPA 194
RR LTS EA PP+
Sbjct: 48 RRSLTSHEATKPPS 7
Score = 21.7 bits (41), Expect(2) = 1.7
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPP 197
+F G TVPRTV* RR + P
Sbjct: 108 AFLALPGSRTVPRTV*WALERRSLTSHEATKP 13
>gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008J14f, mRNA sequence
Length = 910
Score = 87.7 bits (185), Expect(2) = 1e-032
Identities = 38/82 (46%), Positives = 46/82 (56%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTG GFI S LVK LL +GY V TVR+P DPKN L LDG
Sbjct: 74 VCVTGGNGFIGSCLVKLLLSRGYAVHATVRDPRDPKNAFLTELDGAPANLRLFKADVLDY 253
Query: 360 QSLAEAFSGCDGVFHAASPVTD 425
++ AF+GC+GV H +PV +
Sbjct: 254 DTVTAAFAGCEGVLHVNTPVPE 319
Score = 73.0 bits (153), Expect(2) = 1e-032
Identities = 32/89 (35%), Positives = 47/89 (52%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
+ D + M+EPA++GT V+ A V +++ S I T NP P K D++CWSD
Sbjct: 326 MVDPQKEMMEPAVKGTMNVLKACSATKVHKLIVVSFIDTSCYNPDWTPDKIKDESCWSDK 505
Query: 597 EYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
E + +NW AKT A + A + K G
Sbjct: 506 ELFEQRENWCSLAKTEAHEMALGIGEKNG 592
Score = 40.9 bits (83), Expect = 0.017
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+FFGS G TV T *P R LT E M P PVT T
Sbjct: 186 AFFGSRGSRTVAWTA*PRERSSLTRHEPMKPLPPVTHT 73
>gb|AV930574.1|AV930574 AV930574 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd24c05 3', mRNA sequence
Length = 699
Score = 136 bits (292), Expect(2) = 3e-032
Identities = 54/103 (52%), Positives = 68/103 (66%)
Frame = +3 / -1
Query: 750 STDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCR 929
ST H+ +YLTG+ T N AYV VRDVA AH+ VYE P A GRY+C LHR +
Sbjct: 663 STVHISRYLTGAKKTCPNVVTAYVDVRDVARAHILVYERPDARGRYLCICDVLHRAHFLQ 484
Query: 930 VLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+L LFP YP+ KC+D P V Y+F+NQRL+DLG+DF P+
Sbjct: 483 LLRDLFPYYPITDKCEDDGKPMVKPYRFSNQRLRDLGLDFTPL 355
Score = 76.2 bits (160), Expect = 4e-013
Identities = 46/102 (45%), Positives = 52/102 (50%)
Frame = -2 / +2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
+G KS PRSLSLWL NLY T GL S HL G GK + ++ RC Q RP
Sbjct: 356 SGVKSNPRSLSLWLENLYGLTIGLPSSSHLSVMG*YGKRSRSSWRKWARCSTSQMQRYRP 535
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSV 752
A G S TR A ATS T T A V PVR + W+V
Sbjct: 536 RASGRS*TRMWARATSRTST*AVTTLGQVFLAPVR*RLMWTV 661
Score = 64.8 bits (135), Expect = 1e-009
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = -1 / +1
Query: 1049 EVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRV 870
EV PQ+ EPLVGE V R+ ++L L G G++ EE+ + +V AVQ A+V+A +
Sbjct: 364 EVQPQVPEPLVGEPVWLDHRLAVILTLVGNGIVWEEVSKQLEKVGAVQHVADAEVSAACI 543
Query: 869 GRLVHPDVRLG 837
G LV DV G
Sbjct: 544 GALVDKDVGTG 576
Score = 35.0 bits (70), Expect = 1.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / -2
Query: 1006 TSSPTRGSRIWGWTS 1050
T SPTRGS WGWTS
Sbjct: 407 TGSPTRGSGTWGWTS 363
Score = 23.1 bits (44), Expect(2) = 3e-032
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 1061 QCLYETVTSLQEKGML 1108
+ L+ETV SLQ++G L
Sbjct: 351 ESLHETVLSLQQQGHL 304
>gb|AV929667.1|AV929667 AV929667 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd16b10 3', mRNA sequence
Length = 682
Score = 136 bits (292), Expect(2) = 3e-032
Identities = 54/103 (52%), Positives = 68/103 (66%)
Frame = +3 / -2
Query: 750 STDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCR 929
ST H+ +YLTG+ T N AYV VRDVA AH+ VYE P A GRY+C LHR +
Sbjct: 654 STVHISRYLTGAKKTCPNVVTAYVDVRDVARAHILVYERPDARGRYLCICDVLHRAHFLQ 475
Query: 930 VLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+L LFP YP+ KC+D P V Y+F+NQRL+DLG+DF P+
Sbjct: 474 LLRDLFPYYPITDKCEDDGKPMVKPYRFSNQRLRDLGLDFTPL 346
Score = 76.2 bits (160), Expect = 4e-013
Identities = 46/102 (45%), Positives = 52/102 (50%)
Frame = -2 / +2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
+G KS PRSLSLWL NLY T GL S HL G GK + ++ RC Q RP
Sbjct: 347 SGVKSNPRSLSLWLENLYGLTIGLPSSSHLSVMG*YGKRSRSSWRKWARCSTSQMQRYRP 526
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSV 752
A G S TR A ATS T T A V PVR + W+V
Sbjct: 527 RASGRS*TRMWARATSRTST*AVTTLGQVFLAPVR*RLMWTV 652
Score = 64.8 bits (135), Expect = 1e-009
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = -1 / +1
Query: 1049 EVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRV 870
EV PQ+ EPLVGE V R+ ++L L G G++ EE+ + +V AVQ A+V+A +
Sbjct: 355 EVQPQVPEPLVGEPVWLDHRLAVILTLVGNGIVWEEVSKQLEKVGAVQHVADAEVSAACI 534
Query: 869 GRLVHPDVRLG 837
G LV DV G
Sbjct: 535 GALVDKDVGTG 567
Score = 35.0 bits (70), Expect = 1.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 1006 TSSPTRGSRIWGWTS 1050
T SPTRGS WGWTS
Sbjct: 398 TGSPTRGSGTWGWTS 354
Score = 23.1 bits (44), Expect(2) = 3e-032
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 1061 QCLYETVTSLQEKGML 1108
+ L+ETV SLQ++G L
Sbjct: 342 ESLHETVLSLQQQGHL 295
>gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o15 5', mRNA sequence
Length = 521
Score = 72.5 bits (152), Expect(3) = 2e-031
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRV S V+ NP K + W D +
Sbjct: 250 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVXIVXSCAAVFNNPNWPKGKVFTEDSWXDED 429
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 430 LCRKGEDWYLLSKTRAEREAFAYAAKTG 513
Score = 69.3 bits (145), Expect(3) = 2e-031
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 61 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 234
Score = 35.4 bits (71), Expect(3) = 1e-006
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 234 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 55
Query: 239 LQE 231
L E
Sbjct: 54 LGE 46
Score = 33.1 bits (66), Expect(3) = 2e-031
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3 / +1
Query: 198 GGFIASWLVKRLLEKGY 248
GGF+ASWLVK LL K +
Sbjct: 10 GGFVASWLVKLLLSKAH 60
Score = 32.7 bits (65), Expect(2) = 1.7
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 233 TGLATWKTPSQPATADAML 177
Score = 30.9 bits (61), Expect(3) = 1e-006
Identities = 25/64 (39%), Positives = 28/64 (43%)
Frame = -2 / -1
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T E TR T AS A T
Sbjct: 479 SARVLESKYQSSPFLHRSSSXQLSSVNTLPLGQLGLLNTAAHEXTMXTRLTFASLQAFNT 300
Query: 469 *RVP 458
VP
Sbjct: 299 FSVP 288
Score = 23.5 bits (45), Expect(3) = 1e-006
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2 / -1
Query: 235 RRRLTSQEAMNPPA 194
RR LTS EA PP+
Sbjct: 47 RRSLTSHEATKPPS 6
Score = 21.7 bits (41), Expect(2) = 1.7
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPP 197
+F G TVPRTV* RR + P
Sbjct: 107 AFLALPGSRTVPRTV*WALERRSLTSHEATKP 12
>gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak37l05 5', mRNA sequence
Length = 637
Score = 88.1 bits (186), Expect(2) = 2e-031
Identities = 37/89 (41%), Positives = 51/89 (57%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
+ D + M+EPA++GT V+ A V +++ SSI T NP K D++CWSD
Sbjct: 203 MVDPQKEMMEPAVKGTMNVLKACSATKVHKLIVVSSIATSCFNPDWPRDKIKDESCWSDK 382
Query: 597 EYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
E CK ++NWY AKT AE+ A E K G
Sbjct: 383 ELCKQSENWYSLAKTEAEEMALEYGEKNG 469
Score = 68.9 bits (144), Expect(2) = 2e-031
Identities = 29/65 (44%), Positives = 36/65 (55%)
Frame = +3 / +2
Query: 231 LLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAA 410
LL +GY V TVR+P DPKN L LDG ++ AF+GC+GVFH A
Sbjct: 2 LLSRGYAVHATVRDPRDPKNAFLTELDGAPANLRLFKADVLDYDTVTAAFAGCEGVFHVA 181
Query: 411 SPVTD 425
+PV D
Sbjct: 182 TPVPD 196
Score = 42.3 bits (86), Expect = 0.007
Identities = 24/65 (36%), Positives = 35/65 (53%)
Frame = -1 / -1
Query: 425 IGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCV 246
+G R G +EDA+ AGEG + V+ V E+ + G+V+ Q VL + V D D V
Sbjct: 196 VGHRSGDMEDALAAGEGGRHGVVVEHVRLEQPQVRRGSVQLRQERVLRVTWVADGGVDGV 17
Query: 245 ALLQE 231
A +E
Sbjct: 16 AAGEE 2
Score = 33.1 bits (66), Expect = 3.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKAS 371
TG A WKTPSQP KA+
Sbjct: 189 TGVATWKTPSQPAKAA 142
>gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. vulgare cDNA clone HT11I05
5-PRIME, mRNA sequence
Length = 654
Score = 114 bits (244), Expect(2) = 2e-031
Identities = 50/103 (48%), Positives = 60/103 (58%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 168 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTLCRADVLDY 347
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
L AF GC GVFH ASPV++DP+++ + A AD
Sbjct: 348 DGLRAAFCGCHGVFHVASPVSNDPDLVPVAVEGTRNVIRAVAD 476
Score = 102 bits (218), Expect = 4e-021
Identities = 41/76 (53%), Positives = 53/76 (69%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ A+ GTR V+ A DAGV+RVVFTSS G V+M+P R P +D+ CWSD ++CKNT
Sbjct: 423 LVPVAVEGTRNVIRAVADAGVRRVVFTSSYGAVHMDPNRSPDAVLDEACWSDYDFCKNTG 602
Query: 618 NWYCYAKTVAEQGAWE 665
N YC AK +AE A E
Sbjct: 603 NLYCCAKMMAEITATE 650
Score = 72.1 bits (151), Expect(2) = 6e-027
Identities = 39/67 (58%), Positives = 44/67 (65%)
Frame = -2 / -3
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAA 479
A SA +LA QY+ VFLQ S SLQQ SS+ G R G M T P +DVNTTR TPAS+ A
Sbjct: 643 AVISAIILAQQYRLPVFLQKS*SLQQASSSTASGLRLGSMCTAP*DDVNTTRRTPASATA 464
Query: 478 AIT*RVP 458
IT VP
Sbjct: 463 LITFLVP 443
Score = 69.8 bits (146), Expect(2) = 6e-027
Identities = 35/87 (40%), Positives = 50/87 (57%)
Frame = -1 / -2
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+G R G VEDAV A EG +A+ V+ VGA + E GA++ QV VL + +
Sbjct: 428 HEVGVVGHRRGDVEDAVAAAEGGAEAVVVEDVGAAQGEPFLGALQRQQVRVLAVSGISGG 249
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
+ D VA +E L +PG +E S A+
Sbjct: 248 SPDAVAAEEELLHDPGADEASGPRDAD 168
Score = 45.5 bits (93), Expect(3) = 2e-010
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 280 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 167
Score = 41.8 bits (85), Expect(2) = 2e-031
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2 / +2
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
P P P++ R LLER R+LQEH + VLLRQD
Sbjct: 530 PQPQPRRRARRGLLERLRLLQEHRQPVLLRQD 625
Score = 36.3 bits (73), Expect(3) = 2e-010
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTP QP+KA+ R
Sbjct: 406 TGEATWKTPWQPQKAARR 353
Score = 25.8 bits (50), Expect(3) = 2e-010
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3 / -1
Query: 612 CSCNTRGRSSRCRPQACWGHGRG 544
CSC +R RSSR R G G G
Sbjct: 597 CSCRSRSRSSRPRRARRRGCGWG 529
>gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34g17 5', mRNA sequence
Length = 647
Score = 78.5 bits (165), Expect(3) = 8e-031
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3 / +2
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 131 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 310
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 311 LCRKGEDWYLLSKTRAEREAFAYAAKTG 394
Score = 57.4 bits (119), Expect(3) = 8e-031
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 455 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 634
Query: 924 CRVL 935
+L
Sbjct: 635 INIL 646
Score = 51.0 bits (105), Expect(3) = 5e-015
Identities = 28/54 (51%), Positives = 31/54 (57%)
Frame = -2 / -3
Query: 892 QM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
QM RP A G SY R ASATS T T F+ V P+RY +LAFTVGC
Sbjct: 603 QMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCSPLRYLRRILLLAFTVGC 442
Score = 36.8 bits (74), Expect(3) = 8e-031
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A A +GC+GVFH ASPV
Sbjct: 59 SIASAVAGCEGVFHVASPV 115
Score = 35.0 bits (70), Expect(3) = 5e-015
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 360 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 181
Query: 469 *RVP 458
VP
Sbjct: 180 FSVP 169
Score = 32.7 bits (65), Expect(3) = 5e-015
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 114 TGLATWKTPSQPATADAML 58
>gb|BM442873.2|BM442873 EBro02_SQ001_K13_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_K13 5', mRNA sequence
Length = 480
Score = 85.8 bits (181), Expect(3) = 1e-030
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+++G+GRTVCVTGAGGFIASWLVK LLEKGY V GTVRNP D
Sbjct: 145 VATGRGRTVCVTGAGGFIASWLVKLLLEKGYAVHGTVRNPDD 270
Score = 68.4 bits (143), Expect(2) = 4e-015
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -2 / -2
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
S+GF TVP T *PFSRR LTS +AM PPAPVT TVRP P
Sbjct: 269 SSGFRTVPWTA*PFSRRSLTSHDAMKPPAPVTHTVRPRP 153
Score = 59.3 bits (123), Expect(3) = 1e-030
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +3 / +1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDPE 434
+N HLR L+G +SL AF GC GVFH A PVTDDPE
Sbjct: 277 RNAHLRGLEGAAERLTLFRVDLLDKESLVAAFRGCQGVFHTACPVTDDPE 426
Score = 40.0 bits (81), Expect = 0.033
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQE 271
R+H ++A QAPPGEGL PRH E
Sbjct: 189 RLHRVMAGQAPPGEGLRRPRHRPE 260
Score = 39.1 bits (79), Expect(2) = 1e-005
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
I R+PD A D VALLQE LD+P +E + + H +
Sbjct: 270 IIRIPDGAVDGVALLQEELDQP*RDEAAGARHTH 169
Score = 33.6 bits (67), Expect(2) = 4e-015
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 431 RVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
R+IGD G+E A+ + E +AL VQQV EE + + + QV
Sbjct: 423 RIIGDGTCGMEYALASSECSDEALLVQQVHPEEGQPLRRPFQASQV 286
Score = 32.2 bits (64), Expect = 7.2
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 217 GSSSASWRRATQSAARSGTL 276
G SS+SWRRAT S A SG L
Sbjct: 206 GWSSSSWRRATPSTAPSGIL 265
Score = 30.4 bits (60), Expect(2) = 1e-005
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2 / -2
Query: 421 VTGEAAWKTPSQPEKASARL 362
VTG A W TP P A+ RL
Sbjct: 413 VTGHAVWNTPWHPRNAATRL 354
Score = 26.7 bits (52), Expect(3) = 1e-030
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAA 485
MIEPA+ GTR V+ AA
Sbjct: 431 MIEPAVSGTRNVINAA 478
>gb|AV931426.1|AV931426 AV931426 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd19l24 3', mRNA sequence
Length = 655
Score = 129 bits (276), Expect(2) = 4e-030
Identities = 51/97 (52%), Positives = 64/97 (65%)
Frame = +3 / -3
Query: 768 KYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLF 947
+YLTG+ T N AYV VRDVA AH+ VYE P A GRY+C LHR ++L LF
Sbjct: 644 RYLTGAKKTCPNVVTAYVDVRDVARAHILVYERPDARGRYLCICDVLHRAHFLQLLRDLF 465
Query: 948 PEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
P YP+ KC+D P V Y+F+NQRL+DLG+DF P+
Sbjct: 464 PYYPITDKCEDDGKPMVKPYRFSNQRLRDLGLDFTPL 354
Score = 71.6 bits (150), Expect = 1e-011
Identities = 44/95 (46%), Positives = 48/95 (50%)
Frame = -2 / +1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
+G KS PRSLSLWL NLY T GL S HL G GK + ++ RC Q RP
Sbjct: 355 SGVKSNPRSLSLWLENLYGLTIGLPSSSHLSVMG*YGKRSRSSWRKWARCSTSQMQRYRP 534
Query: 877 CAWGASYTRTCASATSLTCTYACAAFT*VVADPVR 773
A G S TR A ATS T T A V PVR
Sbjct: 535 RASGRS*TRMWARATSRTST*AVTTLGQVFLAPVR 639
Score = 64.8 bits (135), Expect = 1e-009
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = -1 / +3
Query: 1049 EVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAVRV 870
EV PQ+ EPLVGE V R+ ++L L G G++ EE+ + +V AVQ A+V+A +
Sbjct: 363 EVQPQVPEPLVGEPVWLDHRLAVILTLVGNGIVWEEVSKQLEKVGAVQHVADAEVSAACI 542
Query: 869 GRLVHPDVRLG 837
G LV DV G
Sbjct: 543 GALVDKDVGTG 575
Score = 35.0 bits (70), Expect = 1.1
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / -1
Query: 1006 TSSPTRGSRIWGWTS 1050
T SPTRGS WGWTS
Sbjct: 406 TGSPTRGSGTWGWTS 362
Score = 23.1 bits (44), Expect(2) = 4e-030
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 1061 QCLYETVTSLQEKGML 1108
+ L+ETV SLQ++G L
Sbjct: 350 ESLHETVLSLQQQGHL 303
>gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59M02
5-PRIME, mRNA sequence
Length = 464
Score = 98.7 bits (209), Expect(2) = 4e-030
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 224 NTSAEAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 403
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ +++PE+PVP KC D
Sbjct: 404 VKIIHEMYPEFPVPDKCAD 460
Score = 63.4 bits (132), Expect = 3e-009
Identities = 37/83 (44%), Positives = 40/83 (48%)
Frame = -2 / -3
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 459 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 280
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP F S L F+VGC
Sbjct: 279 AYVEDDPFINFNIASALVFSVGC 211
Score = 53.8 bits (111), Expect(2) = 4e-030
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3 / +2
Query: 537 YMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
Y R P VD+T +S E C+ Q WY +KT+AE+ AW+ A+ G
Sbjct: 17 YNGKPRTPDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAKDNG 163
>gb|BQ464700.1|BQ464700 HU01A05T HU Hordeum vulgare subsp. vulgare cDNA clone HU01A05
5-PRIME, mRNA sequence
Length = 661
Score = 116 bits (249), Expect(2) = 6e-030
Identities = 51/103 (49%), Positives = 61/103 (59%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 209 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTMCRADVLDY 388
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
L AF GC GVFH ASPV++DP+++ + AAAD
Sbjct: 389 DGLGAAFHGCHGVFHVASPVSNDPDLVPVAVEGTRNVIRAAAD 517
Score = 97.3 bits (206), Expect = 2e-019
Identities = 37/66 (56%), Positives = 48/66 (72%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ A+ GTR V+ AA DAGV+RVVFTSS G V+M+P R P +D+ CWSD ++CKNT
Sbjct: 464 LVPVAVEGTRNVIRAAADAGVRRVVFTSSYGAVHMDPNRSPDAVLDEACWSDYDFCKNTG 643
Query: 618 NWYCYA 635
N YC A
Sbjct: 644 NLYCCA 661
Score = 71.6 bits (150), Expect(2) = 5e-026
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1 / -1
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+GDR G V+DAV A EG +A+ V+ VGA E + ++G QV VL + +
Sbjct: 469 HEVGVVGDRRGDVKDAVAAVEGGAEAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGG 290
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
++D VA +E L PG +E S + HA+
Sbjct: 289 SSDAVAAEEELLHHPGADEASRTRHAD 209
Score = 67.0 bits (140), Expect(2) = 5e-026
Identities = 35/57 (61%), Positives = 39/57 (68%)
Frame = -2 / -2
Query: 628 QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
QY+ VFLQ S SLQQ SS+ G R G M T P +DVNTTR TPAS+AA IT VP
Sbjct: 654 QYRLPVFLQKS*SLQQASSSTASGLRLGSMCTAP*DDVNTTRRTPASAAALITFLVP 484
Score = 45.5 bits (93), Expect(3) = 4e-007
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 321 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 208
Score = 35.0 bits (70), Expect(2) = 6e-030
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2 / +1
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLR 634
P P P++ R LLER R+LQ+H + VLLR
Sbjct: 571 PQPQPRRRARRGLLERLRLLQKHRQPVLLR 660
Score = 27.2 bits (53), Expect(3) = 4e-007
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA KTP QP KA+ R
Sbjct: 447 TGEAT*KTPWQPWKAAPR 394
Score = 23.5 bits (45), Expect(3) = 4e-007
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3 / -3
Query: 615 GCSCNTRGRSSRCRPQACWGHGRG 544
GC C R RS RP+ G G
Sbjct: 647 GCLCFCRSRSRSSRPRRARRRGCG 576
>gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. vulgare cDNA clone HV13C06
5-PRIME, mRNA sequence
Length = 495
Score = 67.0 bits (140), Expect(4) = 6e-030
Identities = 26/55 (47%), Positives = 35/55 (63%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
+I PA+ GT V+ A +A VKRVV SS+ V NP KP+D+ CWSD++Y
Sbjct: 331 LIAPAVTGTMNVLKACSEAKVKRVVMVSSVAAVMTNPSWPEGKPMDEDCWSDVDY 495
Score = 61.1 bits (127), Expect = 1e-008
Identities = 34/73 (46%), Positives = 41/73 (56%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
D G VED V AG+G A VQQVG E+ + + GAV+ QV VL + V D AAD VA
Sbjct: 297 DGAGDVEDDVAAGDGRRHAAVVQQVGLEQPQPLRGAVQRRQVRVLGVAEVTDGAADGVAA 118
Query: 239 LQEALDEPGGNEP 201
A E +EP
Sbjct: 117 AAAAAGEEQLDEP 79
Score = 50.6 bits (104), Expect(4) = 6e-030
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKG 245
++G T CVTGAGGF+ASWLVK LL +G
Sbjct: 22 AAGTTTTACVTGAGGFVASWLVKLLLSRG 108
Score = 37.3 bits (75), Expect(4) = 6e-030
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDG 314
Y VRGTVR+ D KN HL ALDG
Sbjct: 124 YAVRGTVRDLGDAKNAHLPALDG 192
Score = 33.6 bits (67), Expect = 2.8
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
P R LTS EA PPAPVT V P
Sbjct: 107 PRERSSLTSHEATKPPAPVTHAVVVVP 27
Score = 32.2 bits (64), Expect(4) = 6e-030
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A A +GCD VFH A PV
Sbjct: 241 SMAAAIAGCDVVFHVACPV 297
Score = 31.8 bits (63), Expect(2) = 0.001
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKT SQP A+A L
Sbjct: 296 TGQATWKTTSQPAMAAAML 240
Score = 31.3 bits (62), Expect(2) = 0.001
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / -1
Query: 260 AADCVALLQEALDEPGGNEPSSSGHA 183
AA A +E LDEP G+E + +GHA
Sbjct: 123 AAAAAAAGEEQLDEPRGHEAAGAGHA 46
>gb|BG344412.1|BG344412 HVSMEg0009D04f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009D04f, mRNA sequence
Length = 850
Score = 111 bits (238), Expect(3) = 2e-029
Identities = 42/66 (63%), Positives = 51/66 (77%)
Frame = +3 / -2
Query: 861 EAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLG 1040
EAP A GRY+CAE LHR D+ +LAKLFPEYPVPT+C D+VNP YK +NQ+L+DLG
Sbjct: 483 EAPQASGRYLCAERVLHRQDVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLG 304
Query: 1041 MDFVPV 1058
+ F PV
Sbjct: 303 LKFTPV 286
Score = 80.3 bits (169), Expect(3) = 3e-019
Identities = 41/66 (62%), Positives = 41/66 (62%)
Frame = -2 / +2
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RP 878
TG PRS S WL L G T S HLVGTGYSGKSLAR S RCR SAQ *RP
Sbjct: 287 TGVNLRPRSCSFWLDIL*GCFRGFTSSEHLVGTGYSGKSLARMWTTSWRCRTRSAQR*RP 466
Query: 877 CAWGAS 860
AWGAS
Sbjct: 467 EAWGAS 484
Score = 62.9 bits (131), Expect = 4e-009
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = -1 / +1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ +IL+ LVG LV V+LV A GVL EELGED +V AVQ ALGA VAA
Sbjct: 289 RSELEAKILQLLVGHLVRLLPWVHLVRAPCWDGVLGEELGEDVDDVLAVQDALGAKVAAG 468
Query: 875 RVGRL 861
+GRL
Sbjct: 469 GLGRL 483
Score = 33.1 bits (66), Expect(3) = 2e-029
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 1067 LYETVTSLQEKGMLPV 1114
LYETV SLQEKG LPV
Sbjct: 276 LYETVKSLQEKGHLPV 229
Score = 29.9 bits (59), Expect(3) = 3e-019
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3 / +2
Query: 1113 TGSMPFSWRLVTVS*R 1066
TG PFSWRL TVS R
Sbjct: 230 TGRCPFSWRLFTVSYR 277
Score = 26.3 bits (51), Expect(2) = 4.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2 / -1
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGS 1036
VPR ++V G P+ +Q QPEA GS
Sbjct: 391 VPRPNKVL*RGEPTEAALQDVQPEAAGS 308
Score = 24.0 bits (46), Expect(2) = 4.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1 / -1
Query: 1036 WGWTSCRSAVPLRDGHQPPGE 1098
W + +RDG +PPGE
Sbjct: 307 WPQVHSCERLSVRDGEEPPGE 245
Score = 23.1 bits (44), Expect(3) = 3e-019
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = -2 / +3
Query: 868 GASYTRTCASATSLTCTYACAAF 800
GA C ATS T YAC +
Sbjct: 474 GAPRDPECPPATSPTSPYACTGW 542
Score = 23.1 bits (44), Expect(3) = 2e-029
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3 / -2
Query: 759 HVMKYLTGSATTYVN 803
H++K L GSA Y N
Sbjct: 582 HILKSLEGSARKYAN 538
>gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0007P02f, mRNA sequence
Length = 837
Score = 79.9 bits (168), Expect(4) = 5e-029
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 83 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 214
Score = 56.1 bits (116), Expect(3) = 4e-012
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 216 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 88
Score = 55.6 bits (115), Expect(4) = 5e-029
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3 / +2
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+V +S Y R P VD+T +S E C+ + WY +KT+AE+ AW+ A+ G
Sbjct: 452 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNG 628
Score = 40.5 bits (82), Expect(2) = 1e-006
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 359 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 529
Score = 39.1 bits (79), Expect(2) = 2e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -3
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 214 LGVGGVPDGGADGVAAVEEELDEPGGDVARGAGDAH 107
Score = 35.9 bits (72), Expect(2) = 1e-006
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 130 LHRLLARQAPPPPRLHRPRH 189
Score = 29.5 bits (58), Expect(2) = 2e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 334 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 224
Score = 29.5 bits (58), Expect(3) = 4e-012
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 345 GEAVWKTQSQPAMAASKV 292
Score = 29.0 bits (57), Expect(3) = 4e-012
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 868 GASYTRTCASATSLTCTY 815
G+S R CASATSLT T+
Sbjct: 811 GSSNARKCASATSLTFTH 758
Score = 28.6 bits (56), Expect(4) = 5e-029
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 305 AIAGCDCVFHTASP 346
Score = 27.2 bits (53), Expect(4) = 5e-029
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3 / +3
Query: 816 YVHVRDVAEAHVRVYEAPHAH 878
+V+V+DVA AH +E P+A+
Sbjct: 759 WVNVKDVALAHFLAFEDPYAN 821
>gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. vulgare cDNA clone HF12C17
5-PRIME, mRNA sequence
Length = 683
Score = 79.9 bits (168), Expect(3) = 8e-029
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 54 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 185
Score = 57.4 bits (119), Expect(3) = 8e-029
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3 / +3
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+V +S Y R P VD+T +S E C+ Q WY +KT+AE+ AW+ A+ G
Sbjct: 423 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAKDNG 599
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 187 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 59
Score = 40.5 bits (82), Expect(2) = 9e-008
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 330 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 500
Score = 39.6 bits (80), Expect(2) = 9e-008
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 101 LHRLLARQAPPPPGLHRPRH 160
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 185 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 78
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 305 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 195
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 316 GEAVWKTQSQPAMAASKV 263
Score = 28.6 bits (56), Expect(3) = 8e-029
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 276 AIAGCDCVFHTASP 317
>gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. vulgare cDNA clone HX03O06
5-PRIME, mRNA sequence
Length = 667
Score = 79.9 bits (168), Expect(3) = 8e-029
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 38 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 169
Score = 57.4 bits (119), Expect(3) = 8e-029
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3 / +2
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+V +S Y R P VD+T +S E C+ Q WY +KT+AE+ AW+ A+ G
Sbjct: 407 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAKDNG 583
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 171 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 43
Score = 40.5 bits (82), Expect(2) = 9e-008
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 314 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 484
Score = 39.6 bits (80), Expect(2) = 9e-008
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 85 LHRLLARQAPPPPGLHRPRH 144
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 169 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 62
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 289 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 179
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 300 GEAVWKTQSQPAMAASKV 247
Score = 28.6 bits (56), Expect(3) = 8e-029
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 260 AIAGCDCVFHTASP 301
>gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. vulgare cDNA clone HT09N23
5-PRIME, mRNA sequence
Length = 636
Score = 80.3 bits (169), Expect(2) = 9e-029
Identities = 36/88 (40%), Positives = 51/88 (57%)
Frame = +3 / +3
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A +A VKRVV SS+ V NP K D+ WSD +
Sbjct: 57 TNPEEEVIAPAVTGTLNVLKACYEAKVKRVVMVSSVAAVSNNPNWPKGKFFDEDSWSDED 236
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT+AE+ A+ A K G
Sbjct: 237 LCRKGEDWYFLSKTLAEREAFAYAEKTG 320
Score = 67.5 bits (141), Expect(2) = 9e-029
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S++ ++ YL G T N + V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 381 NTSSNILINYLKGERDTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDM 560
Query: 924 CRVLAKLFPEYPVP 965
VL L+P Y P
Sbjct: 561 ISVLKTLYPTYTYP 602
Score = 42.3 bits (86), Expect(2) = 2e-009
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -2 / -3
Query: 892 QM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSVLAFTVGC 731
QM RP A G SY ASATS T T + F+ V P+R + +L FTV C
Sbjct: 529 QMYRPDASGFSYANRRASATSRTSTRFLSLFSTVSRSPLR*LMRILLLVFTVDC 368
Score = 40.5 bits (82), Expect(2) = 2e-009
Identities = 29/64 (45%), Positives = 33/64 (51%)
Frame = -2 / -3
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA+VL +YQ FLQ S S Q SS L + G + T ED TTR T AS A T
Sbjct: 286 SASVLERKYQSSPFLQRSSSDQLSSSKNLPLGQLGLLDTAATEDTMTTRLTFAS*QAFKT 107
Query: 469 *RVP 458
VP
Sbjct: 106 FSVP 95
>gb|CA001150.1|CA001150 HS05E05u HS Hordeum vulgare subsp. vulgare cDNA clone HS05E05
3-PRIME, mRNA sequence
Length = 566
Score = 116 bits (249), Expect(2) = 9e-029
Identities = 45/94 (47%), Positives = 62/94 (65%)
Frame = +3 / -2
Query: 777 TGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEY 956
TG+ + Y NA AY VRDVA AHV VYE P A GRY+C + LHR ++L LFP+Y
Sbjct: 565 TGAKSIYPNAVAAYTDVRDVARAHVLVYEHPDARGRYLCIGAVLHRTHFLQLLGDLFPQY 386
Query: 957 PVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+ KC++ P YKF+N+RL++LG++F P+
Sbjct: 385 HITAKCEEDGKPMAKPYKFSNRRLRELGLEFTPL 284
Score = 76.2 bits (160), Expect = 4e-013
Identities = 37/73 (50%), Positives = 46/73 (63%)
Frame = -1 / +2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P VGELV + ++ ALGGY VLREE+ E+ EV AVQ A+VAA
Sbjct: 287 RSELQSQLPQPSVGELVRLRHGLAVLFALGGYVVLREEVAEELKEVGAVQHGADAEVAAA 466
Query: 875 RVGRLVHPDVRLG 837
RVG LV DV G
Sbjct: 467 RVGVLVDEDVGAG 505
Score = 66.1 bits (138), Expect = 4e-010
Identities = 42/93 (45%), Positives = 46/93 (49%)
Frame = -2 / +3
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL L NLY GL S HL Y GK R+ ++ RC Q *RP
Sbjct: 288 GVNSNPSSLSLRLENLYGFAMGLPSSSHLAVMWYCGKRSPRS*RKWVRCSTAPMQR*RPR 467
Query: 874 AWGASYTRTCASATSLTCTYACAAFT*VVADPV 776
A G S TRT A ATS T A A *+ PV
Sbjct: 468 ASGCS*TRTWARATSRTSV*AATALG*IDLAPV 566
Score = 30.9 bits (61), Expect(2) = 9e-029
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / -2
Query: 1061 QCLYETVTSLQEKGMLPV 1114
+ LYETVT LQ+KG LP+
Sbjct: 280 ESLYETVTCLQKKGHLPL 227
>gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baaln14 5', mRNA sequence
Length = 611
Score = 70.3 bits (147), Expect(3) = 3e-028
Identities = 26/38 (68%), Positives = 32/38 (84%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDP 284
G+ VCVTGA G+IASW+VK LL++GYTV GTVR+ DP
Sbjct: 77 GKLVCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADP 190
Score = 52.8 bits (109), Expect(3) = 3e-028
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +3 / +2
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEV 668
V+ +S + R P VD+T +S E CK Q WY +KT+AE+ AWEV
Sbjct: 431 VITSSMASVIVNGKPRTPDVIVDETWFSLPELCKKNQQWYTLSKTLAEEAAWEV 592
Score = 52.4 bits (108), Expect(3) = 8e-010
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -2 / -3
Query: 286 FGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FGS TVP TV*P SRR LT Q+AM P APVTQT P
Sbjct: 192 FGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQTSFP 76
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+W+ VPD A D VA ++E LD+PG + P +G A+
Sbjct: 193 IWVSGVPDGAMDGVAAVEEELDDPGRDVPGRAGDAD 86
Score = 40.9 bits (83), Expect(3) = 3e-028
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HLRALDG S A GC+ VFHAASPV
Sbjct: 194 KTLHLRALDGANDRLHLFNANLLEEGSFDAAIDGCECVFHAASPV 328
Score = 37.3 bits (75), Expect(2) = 1e-004
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3 / +2
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
D +++ A+ GT V+ + A V+RVV TSS+ +V +N + D W L
Sbjct: 344 DPKAELLDSAVSGTLNVLRSCKKASVRRVVITSSMASVIVNGKPRTPDVIVDETWFSL 517
Score = 31.8 bits (63), Expect(2) = 1e-004
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQAPP LH P H
Sbjct: 106 RVHRVLDRQAPPRPRLHRPWH 168
Score = 30.9 bits (61), Expect(3) = 8e-010
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEAAW T SQP A+++
Sbjct: 327 TGEAAWNTHSQPSMAASK 274
Score = 22.1 bits (42), Expect(3) = 8e-010
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2 / -3
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A SA VL Y FLQ S S VSST
Sbjct: 582 AASSARVLDKVYHC*FFLQSSGSENHVSST 493
>gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003N13f, mRNA sequence
Length = 1042
Score = 79.9 bits (168), Expect(3) = 4e-028
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 7 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 138
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 140 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 12
Score = 55.1 bits (114), Expect(3) = 4e-028
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +3 / +1
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+V +S Y R P VD+T +S E C+ + WY +KT+AE+ AW+ A+ G
Sbjct: 376 IVTSSMAACAYNGKPRTPDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNG 552
Score = 39.1 bits (79), Expect(2) = 2e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 138 LGVGGVPDGGADGVAAVEEELDEPGGDVARGAGDAH 31
Score = 36.3 bits (73), Expect(2) = 3e-005
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++P + GT V+ + A +KRV+ TSS+ N V D W
Sbjct: 283 VKDPKAELLDPTVNGTLNVLRSCKKASIKRVIVTSSMAACAYNGKPRTPDVVVDETW 453
Score = 35.9 bits (72), Expect(2) = 3e-005
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 54 LHRLLARQAPPPPRLHRPRH 113
Score = 29.5 bits (58), Expect(2) = 2e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 258 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 148
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 269 GEAVWKTQSQPAMAASKV 216
Score = 28.6 bits (56), Expect(3) = 4e-028
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 229 AIAGCDCVFHTASP 270
>gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I24V 5', mRNA sequence
Length = 700
Score = 78.0 bits (164), Expect(3) = 7e-028
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+I SWLVK LL +GYTVR TVR+ DPK
Sbjct: 79 MSSGMGKVVCVTGASGYIXSWLVKLLLHRGYTVRATVRDTADPK 210
Score = 56.1 bits (116), Expect(3) = 7e-028
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3 / +1
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+V +S Y R P VD+T +S E C+ Q WY +KT+AE+ AW+ A G
Sbjct: 448 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWYVLSKTLAEEAAWKFAXDNG 624
Score = 54.2 bits (112), Expect(2) = 9e-010
Identities = 27/43 (62%), Positives = 27/43 (62%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQE M P APVT T P PE
Sbjct: 212 FLGSAVSRTVARTV*PRWRRSLTSQEXM*PEAPVTHTTFPIPE 84
Score = 40.5 bits (82), Expect(2) = 9e-008
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 355 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 525
Score = 39.6 bits (80), Expect(2) = 9e-008
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 126 LHRLLARQAPPPPGLHRPRH 185
Score = 35.0 bits (70), Expect(2) = 4e-004
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPG + +G A+
Sbjct: 210 LGVGGVPDGGADGVAPVEEELDEPGXDVARGAGDAH 103
Score = 29.5 bits (58), Expect(2) = 4e-004
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 330 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 220
Score = 29.5 bits (58), Expect(2) = 9e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 341 GEAVWKTQSQPAMAASKV 288
Score = 28.6 bits (56), Expect(3) = 7e-028
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 301 AIAGCDCVFHTASP 342
>gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. vulgare cDNA clone HF22F21
5-PRIME, mRNA sequence
Length = 537
Score = 74.8 bits (157), Expect(2) = 8e-028
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3 / +3
Query: 480 AADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGA 659
A D GV+RVV TSS+ V +P + +D+ CW+D++YC WY +KT+AE+ A
Sbjct: 3 AKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLAEKAA 182
Query: 660 WEVARKRG 683
W+ A + G
Sbjct: 183 WKFAEENG 206
Score = 69.8 bits (146), Expect(2) = 8e-028
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS ++ L G Y + VHV DVA AH+ ++E P A GR++C E H D
Sbjct: 267 NASMAMFLRLLEGCTEEYKDFFIGPVHVEDVALAHITLFEKPSASGRHLCVEPICHWSDF 446
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+A+L+P Y VP KD
Sbjct: 447 ASKVAELYPNYKVPKFPKD 503
>gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092C06f, mRNA sequence
Length = 941
Score = 79.9 bits (168), Expect(4) = 1e-027
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 119 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 250
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 252 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 124
Score = 40.0 bits (81), Expect(4) = 1e-027
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V ++ V D W
Sbjct: 395 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVXLHGKPRTPDVVVDETW 565
Score = 39.1 bits (79), Expect(2) = 2e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 250 LGVGGVPDGGADGVAAVEEELDEPGGDVARGAGDAH 143
Score = 35.9 bits (72), Expect(2) = 0.001
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 166 LHRLLARQAPPPPRLHRPRH 225
Score = 30.9 bits (61), Expect(4) = 1e-027
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3 / +1
Query: 606 KNTQNWYCYAKTVAEQGAWEVAR 674
+ + WY +KT+AE AW VA+
Sbjct: 586 RKDKQWYVLSKTLAEGAAWXVAK 654
Score = 30.4 bits (60), Expect(2) = 0.001
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3 / +2
Query: 552 RDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQ 653
R P VD+T +S E C+ N CY + + +
Sbjct: 533 RTPDVVVDETWFSSAEVCEKISNGMCYPRPLPRE 634
Score = 29.5 bits (58), Expect(2) = 2e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 370 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 260
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 381 GEAVWKTQSQPAMAASKV 328
Score = 28.6 bits (56), Expect(4) = 1e-027
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 341 AIAGCDCVFHTASP 382
>gb|AL505753.1|AL505753 AL505753 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G19V 5', mRNA sequence
Length = 491
Score = 124 bits (265), Expect = 1e-027
Identities = 47/58 (81%), Positives = 53/58 (91%)
Frame = +3 / +3
Query: 441 IEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNT 614
I PAIRGT+YV+ AA D G+KRVVFTS+IGTVYMNP+RDPSKPVDDTCWSDL+YCK T
Sbjct: 3 IXPAIRGTKYVITAAADMGIKRVVFTSTIGTVYMNPHRDPSKPVDDTCWSDLDYCKKT 176
Score = 86.3 bits (182), Expect = 4e-016
Identities = 41/53 (77%), Positives = 42/53 (79%)
Frame = -2 / -2
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVPR 455
VFLQ SRSLQQVSSTGLLGS GFMYTVPM DV TTR P S+AA IT VPR
Sbjct: 175 VFLQ*SRSLQQVSSTGLLGSLWGFMYTVPMVDVKTTRLMPMSAAAVITYLVPR 17
Score = 38.2 bits (77), Expect = 0.12
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -3 / -3
Query: 606 CNTRGRSSRCRPQACWGHGRGS 541
C+++GRSSRC +ACWG GS
Sbjct: 168 CSSQGRSSRCHRRACWGPCGGS 103
>gb|AV936403.1|AV936403 AV936403 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11d04 3', mRNA sequence
Length = 647
Score = 89.5 bits (189), Expect(3) = 2e-027
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +3 / -2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS + V+ + GS+ T N A +V+VRDVA AH+ YE P A+GRY E H +L
Sbjct: 397 NASVEAVLNLINGSSPTCPNYAHGWVNVRDVALAHILAYEVPSANGRYCIVERVAHYSEL 218
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ K++P P+P KC D
Sbjct: 217 VKIICKMYPNIPLPDKCAD 161
Score = 56.1 bits (116), Expect(2) = 4e-008
Identities = 36/83 (43%), Positives = 39/83 (46%)
Frame = -2 / +3
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL G+G G L S LS P A G SY R CA ATSLT T A
Sbjct: 162 SAHLSGSGMFGYILHMILTSSE**ATLSTMQYLPFAEGTSYARICARATSLTFTQPWA*L 341
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP+ F T S LA +VGC
Sbjct: 342 GHVGDDPLIRFKTASTLALSVGC 410
Score = 48.3 bits (99), Expect(3) = 2e-027
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / -2
Query: 552 RDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVAR 674
R P VD+T +S E CK Q WY +KT+AE+ AW+ ++
Sbjct: 589 RTPDVIVDETWFSLPELCKKNQQWYTLSKTLAEEAAWKFSK 467
Score = 23.1 bits (44), Expect(3) = 2e-027
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 498 VKRVVFTSSIGTVYMN 545
V+RVV TSS+ +V +N
Sbjct: 647 VRRVVITSSMASVIVN 600
Score = 22.1 bits (42), Expect(2) = 4e-008
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2 / +3
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A SA VL Y FLQ S S VSST
Sbjct: 483 AASSARVLDKVYHC*FFLQSSGSENHVSST 572
>gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd16h21, mRNA
sequence
Length = 566
Score = 56.1 bits (116), Expect(4) = 1e-026
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +3 / +3
Query: 189 TGAGGFIASWLVKRLLEKGYTVRGTVRN 272
TGAGG+IASWLV LL +GYTVRGTVR+
Sbjct: 3 TGAGGYIASWLVXLLLSRGYTVRGTVRD 86
Score = 45.5 bits (93), Expect(2) = 6e-007
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = -2 / -2
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPV 188
TVPRTV*P RR TS EAM PPAPV
Sbjct: 79 TVPRTV*PRERRXXTSHEAMYPPAPV 2
Score = 44.6 bits (91), Expect(4) = 1e-026
Identities = 23/54 (42%), Positives = 31/54 (57%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
VTD ++ PA GTR V+ AA A V+R+V SSI V +NP P+ + D
Sbjct: 247 VTDPEVEVLGPAATGTRNVLEAASAAKVRRLVVVSSIVAVDINPKDWPADKIKD 408
Score = 40.9 bits (83), Expect(4) = 1e-026
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3 / +1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HLR+L+ ++A A GC GVFH ASPV
Sbjct: 100 KTGHLRSLENASENLKLIKADLLDNDAMAAAIEGCQGVFHVASPV 234
Score = 34.5 bits (69), Expect = 1.5
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+AR PP LH PRH P
Sbjct: 14 RVHRLVARXXPPLPRLHRPRHRPRP 88
Score = 34.1 bits (68), Expect(4) = 1e-026
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 573 DDTCWSDLEYCKNTQ 617
D+TCWSD E+C+N +
Sbjct: 406 DETCWSDREFCRNNE 450
Score = 28.6 bits (56), Expect(2) = 6e-007
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2 / -1
Query: 460 PRXXXXXXXXXXSVTGEAAWKTPSQPEKASA 368
PR TG A WKTP P A+A
Sbjct: 275 PRTSTSGSVTSPVGTGLATWKTPWHPSMAAA 183
>gb|CA000262.1|CA000262 HS09C23u HS Hordeum vulgare subsp. vulgare cDNA clone HS09C23
3-PRIME, mRNA sequence
Length = 541
Score = 109 bits (233), Expect(2) = 1e-026
Identities = 42/86 (48%), Positives = 57/86 (66%)
Frame = +3 / -3
Query: 801 NAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKD 980
NA AY VRDVA AHV VYE P A GRY+C + LHR ++L LFP+Y + KC++
Sbjct: 539 NAVAAYTDVRDVARAHVLVYEHPDARGRYLCIGAVLHRTHFLQLLGDLFPQYHITAKCEE 360
Query: 981 QVNPPVVGYKFTNQRLKDLGMDFVPV 1058
P YKF+N+RL++LG++F P+
Sbjct: 359 DGKPMAKPYKFSNRRLRELGLEFTPL 282
Score = 76.2 bits (160), Expect = 4e-013
Identities = 37/73 (50%), Positives = 46/73 (63%)
Frame = -1 / +3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P VGELV + ++ ALGGY VLREE+ E+ EV AVQ A+VAA
Sbjct: 285 RSELQSQLPQPSVGELVRLRHGLAVLFALGGYVVLREEVAEELKEVGAVQHGADAEVAAA 464
Query: 875 RVGRLVHPDVRLG 837
RVG LV DV G
Sbjct: 465 RVGVLVDEDVGAG 503
Score = 62.9 bits (131), Expect = 4e-009
Identities = 39/84 (46%), Positives = 42/84 (50%)
Frame = -2 / +1
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL L NLY GL S HL Y GK R+ ++ RC Q *RP
Sbjct: 286 GVNSNPSSLSLRLENLYGFAMGLPSSSHLAVMWYCGKRSPRS*RKWVRCSTAPMQR*RPR 465
Query: 874 AWGASYTRTCASATSLTCTYACAA 803
A G S TRT A ATS T A A
Sbjct: 466 ASGCS*TRTWARATSRTSV*AATA 537
Score = 30.9 bits (61), Expect(2) = 1e-026
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / -3
Query: 1061 QCLYETVTSLQEKGMLPV 1114
+ LYETVT LQ+KG LP+
Sbjct: 278 ESLYETVTCLQKKGHLPL 225
>gb|AV936300.1|AV936300 AV936300 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10n14 3', mRNA sequence
Length = 604
Score = 89.5 bits (189), Expect(2) = 3e-026
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS + V+ + GS+ T N A +V+VRDVA AH+ YE P A+GRY E H +L
Sbjct: 365 NASVEAVLNLINGSSPTCPNYAHGWVNVRDVALAHILAYEVPSANGRYCIVERVAHYSEL 186
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ K++P P+P KC D
Sbjct: 185 VKIICKMYPNIPLPDKCAD 129
Score = 56.1 bits (116), Expect(2) = 4e-008
Identities = 36/83 (43%), Positives = 39/83 (46%)
Frame = -2 / +1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL G+G G L S LS P A G SY R CA ATSLT T A
Sbjct: 130 SAHLSGSGMFGYILHMILTSSE**ATLSTMQYLPFAEGTSYARICARATSLTFTQPWA*L 309
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP+ F T S LA +VGC
Sbjct: 310 GHVGDDPLIRFKTASTLALSVGC 378
Score = 50.1 bits (103), Expect(2) = 3e-026
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3 / -3
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVAR 674
V+ +S + R P VD+T +S E CK Q WY +KT+AE+ AW+ ++
Sbjct: 602 VITSSMASVIVNGKPRTPDVIVDETWFSLPELCKKNQQWYTLSKTLAEEAAWKFSK 435
Score = 22.1 bits (42), Expect(2) = 4e-008
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2 / +1
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A SA VL Y FLQ S S VSST
Sbjct: 451 AASSARVLDKVYHC*FFLQSSGSENHVSST 540
>gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. vulgare cDNA clone HU06K19
5-PRIME, mRNA sequence
Length = 459
Score = 78.5 bits (165), Expect(2) = 7e-026
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLE 599
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD +
Sbjct: 190 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDED 369
Query: 600 YCKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ ++WY +KT AE+ A+ A K G
Sbjct: 370 LCRKGEDWYLLSKTRAEREAFAYAAKTG 453
Score = 59.7 bits (124), Expect(2) = 7e-026
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +3 / +1
Query: 258 GTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
GTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 13 GTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 174
Score = 35.0 bits (70), Expect(2) = 4e-005
Identities = 27/64 (42%), Positives = 30/64 (46%)
Frame = -2 / -2
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A T
Sbjct: 419 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNT 240
Query: 469 *RVP 458
VP
Sbjct: 239 FSVP 228
Score = 32.7 bits (65), Expect(2) = 4e-005
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 173 TGLATWKTPSQPATADAML 117
>gb|BM369883.2|BM369883 EBem07_SQ004_O04_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_O04 5', mRNA sequence
Length = 432
Score = 66.6 bits (139), Expect(3) = 7e-026
Identities = 28/58 (48%), Positives = 35/58 (60%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+ S+A A +GC+GVFH ASPV
Sbjct: 85 YTVRGTVRDPGNAKNAHLKALESAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 258
Score = 45.1 bits (92), Expect(3) = 7e-026
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNP 548
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP
Sbjct: 274 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNP 402
Score = 44.1 bits (90), Expect(3) = 7e-026
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGA GF+ASWLVK LL K +
Sbjct: 16 VCVTGARGFVASWLVKLLLSKAH 84
Score = 34.5 bits (69), Expect(2) = 4e-004
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 258 DRASNMEDAFTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 79
Query: 239 LQE 231
L E
Sbjct: 78 LGE 70
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 257 TGLATWKTPSQPATADAML 201
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -1
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 96 ADSVVGLGEEELDEP*GDEASCAGHAH 16
Score = 29.9 bits (59), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA P APVT T
Sbjct: 71 RRSLTSHEATKPLAPVTHT 15
>gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A21f, mRNA sequence
Length = 919
Score = 83.5 bits (176), Expect(2) = 9e-026
Identities = 32/89 (35%), Positives = 51/89 (57%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
+ D ++ PA++GT V+ A V++V+ SS V NP K D++CWSD
Sbjct: 38 IVDPESEVLAPAVKGTSNVLKACSAMKVQKVIVLSSTAAVDFNPNWPQDKLKDESCWSDK 217
Query: 597 EYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
++C+ ++WY AK VAEQ ++E + K G
Sbjct: 218 DFCQKNEDWYSVAKIVAEQASFEYSEKNG 304
Score = 54.2 bits (112), Expect(2) = 9e-026
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S+ ++ G N V VRDVA+A + VYE ++GRYIC + + DL
Sbjct: 365 NTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDL 544
Query: 924 CRVLAKLFPEY 956
+L K+ P+Y
Sbjct: 545 VDLLKKMHPQY 577
Score = 40.5 bits (82), Expect(2) = 0.007
Identities = 26/65 (40%), Positives = 33/65 (50%)
Frame = -2 / -2
Query: 652 CSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAI 473
CSAT+LA +YQ F Q S S QQ+SS L + G T ++D T T + A
Sbjct: 273 CSATILATEYQSSFFWQKSLSDQQLSSLSLS*GQFGLKSTAAVDDKTITF*TFIAEQAFS 94
Query: 472 T*RVP 458
T VP
Sbjct: 93 TFEVP 79
Score = 23.1 bits (44), Expect(2) = 0.007
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2 / -2
Query: 904 VLSAQM*RPCAWGASYTRTCASATSLTCT 818
+ QM P SYT + ASATS T T
Sbjct: 525 LFGVQMYLPYDSAFSYTSSKASATSRTST 439
>gb|AV936413.1|AV936413 AV936413 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11d16 3', mRNA sequence
Length = 606
Score = 89.5 bits (189), Expect(2) = 9e-026
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS + V+ + GS+ T N A +V+VRDVA AH+ YE P A+GRY E H +L
Sbjct: 370 NASVEAVLNLINGSSPTCPNYAHGWVNVRDVALAHILAYEVPSANGRYCIVERVAHYSEL 191
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ K++P P+P KC D
Sbjct: 190 VKIICKMYPNIPLPDKCAD 134
Score = 56.1 bits (116), Expect(2) = 4e-008
Identities = 36/83 (43%), Positives = 39/83 (46%)
Frame = -2 / +3
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL G+G G L S LS P A G SY R CA ATSLT T A
Sbjct: 135 SAHLSGSGMFGYILHMILTSSE**ATLSTMQYLPFAEGTSYARICARATSLTFTQPWA*L 314
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP+ F T S LA +VGC
Sbjct: 315 GHVGDDPLIRFKTASTLALSVGC 383
Score = 48.3 bits (99), Expect(2) = 9e-026
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3 / -3
Query: 552 RDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVAR 674
R P VD+T +S E CK Q WY +KT+AE+ AW+ ++
Sbjct: 562 RTPDVIVDETWFSLPELCKKNQQWYTLSKTLAEEAAWKFSK 440
Score = 22.1 bits (42), Expect(2) = 4e-008
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2 / +3
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A SA VL Y FLQ S S VSST
Sbjct: 456 AASSARVLDKVYHC*FFLQSSGSENHVSST 545
>gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL107f1 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 721
Score = 74.8 bits (157), Expect(3) = 2e-025
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA D GV+RVV TSS+ V +P + +D+ CW+D++YC WY +KT+ E+
Sbjct: 429 AAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLTEKA 608
Query: 657 AWEVARKRG 683
AW+ A + G
Sbjct: 609 AWKFAEENG 635
Score = 48.3 bits (99), Expect(3) = 2e-025
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+G TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 96 KGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 209
Score = 40.5 bits (82), Expect(2) = 3e-006
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
S+G T T *P +RRR T E M P APVT TV P
Sbjct: 208 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSP 98
Score = 31.8 bits (63), Expect(2) = 4.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 366 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 473
Score = 31.3 bits (62), Expect(2) = 3e-006
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA WKTP QP A++
Sbjct: 355 VQGEARWKTPEQPRAAAS 302
Score = 31.3 bits (62), Expect(3) = 2e-025
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 297 AMLAAARGCSGVFHLASPCTVD 362
Score = 21.7 bits (41), Expect(2) = 4.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H L R PP L PR +P
Sbjct: 128 RLHRLRDRAPPPRPRLLRPRRRPQP 202
>gb|CA023572.1|CA023572 HZ46L02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46L02
5-PRIME, mRNA sequence
Length = 421
Score = 70.7 bits (148), Expect(3) = 2e-025
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +3 / +1
Query: 234 LEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAAS 413
L+ YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH AS
Sbjct: 40 LQAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVAS 219
Query: 414 PV 419
PV
Sbjct: 220 PV 225
Score = 51.9 bits (107), Expect(3) = 2e-025
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +3 / +1
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSD 593
T+ E +I PA+ GT V+ A ++A VKRVV SS V+ NP K + WSD
Sbjct: 241 TNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSD 414
Score = 35.0 bits (70), Expect(2) = 0.026
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 225 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 46
Query: 239 LQ 234
L+
Sbjct: 45 LE 40
Score = 32.7 bits (65), Expect = 5.3
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 224 TGLATWKTPSQPATADAML 168
Score = 31.8 bits (63), Expect(3) = 2e-025
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 198 GGFIASWLVKRLLEKGYTV 254
GGF+ASWLVK LL + T+
Sbjct: 2 GGFVASWLVKLLLSRPTTL 58
Score = 23.1 bits (44), Expect(2) = 0.026
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / -2
Query: 235 RRRLTSQEAMNPP 197
RR LTS EA PP
Sbjct: 39 RRSLTSHEATKPP 1
>gb|BQ464838.1|BQ464838 HU01M14T HU Hordeum vulgare subsp. vulgare cDNA clone HU01M14
5-PRIME, mRNA sequence
Length = 561
Score = 116 bits (249), Expect = 2e-025
Identities = 51/103 (49%), Positives = 61/103 (59%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 199 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTMCRADVLDY 378
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
L AF GC GVFH ASPV++DP+++ + AAAD
Sbjct: 379 DGLGAAFHGCHGVFHVASPVSNDPDLVPVAVEGTRNVIRAAAD 507
Score = 71.6 bits (150), Expect(2) = 3e-018
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1 / -1
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+GDR G V+DAV A EG +A+ V+ VGA E + ++G QV VL + +
Sbjct: 459 HEVGVVGDRRGDVKDAVAAVEGGAEAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGG 280
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
++D VA +E L PG +E S + HA+
Sbjct: 279 SSDAVAAEEELLHHPGADEASRTRHAD 199
Score = 50.6 bits (104), Expect = 2e-005
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +3 / +1
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMN 545
++ A+ GTR V+ AA DAGV+RVVFTSS G V+M+
Sbjct: 454 LVPVAVEGTRNVIRAAADAGVRRVVFTSSYGAVHMD 561
Score = 45.5 bits (93), Expect(2) = 1e-006
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 311 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 198
Score = 40.9 bits (83), Expect(2) = 3e-018
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAIT*RVP 458
M T P +DVNTTR TPAS+AA IT VP
Sbjct: 557 MCTAP*DDVNTTRRTPASAAALITFLVP 474
Score = 27.2 bits (53), Expect(2) = 1e-006
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA KTP QP KA+ R
Sbjct: 437 TGEAT*KTPWQPWKAAPR 384
>gb|CA007861.1|CA007861 HU09D12r HU Hordeum vulgare subsp. vulgare cDNA clone HU09D12
5-PRIME, mRNA sequence
Length = 533
Score = 116 bits (249), Expect = 2e-025
Identities = 51/103 (49%), Positives = 61/103 (59%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 209 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTMCRADVLDY 388
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
L AF GC GVFH ASPV++DP+++ + AAAD
Sbjct: 389 DGLGAAFHGCHGVFHVASPVSNDPDLVPVAVEGTRNVIRAAAD 517
Score = 71.6 bits (150), Expect = 1e-011
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -1 / -2
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+GDR G V+DAV A EG +A+ V+ VGA E + ++G QV VL + +
Sbjct: 469 HEVGVVGDRRGDVKDAVAAVEGGAEAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGG 290
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
++D VA +E L PG +E S + HA+
Sbjct: 289 SSDAVAAEEELLHHPGADEASRTRHAD 209
Score = 45.5 bits (93), Expect(2) = 1e-006
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 321 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 208
Score = 27.2 bits (53), Expect(2) = 1e-006
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA KTP QP KA+ R
Sbjct: 447 TGEAT*KTPWQPWKAAPR 394
>gb|BI960410.1|BI960410 HVSMEn0024I04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024I04f, mRNA sequence
Length = 675
Score = 98.7 bits (209), Expect(2) = 2e-025
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 179 NTSAEAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 358
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ +++PE+PVP KC D
Sbjct: 359 VKIIHEMYPEFPVPDKCAD 415
Score = 60.6 bits (126), Expect = 2e-008
Identities = 36/83 (43%), Positives = 39/83 (46%)
Frame = -2 / -1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+
Sbjct: 414 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKL 235
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP F S L F+VGC
Sbjct: 234 AYVEDDPFINFNIASALVFSVGC 166
Score = 37.7 bits (76), Expect(2) = 2e-025
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3 / +2
Query: 603 CKNTQNWYCYAKTVAEQGAWEVARKRG 683
C+ + WY +KT+AE+ AW+ A+ G
Sbjct: 38 CEKNKQWYVLSKTLAEEAAWKFAKDNG 118
>gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86c3 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 715
Score = 74.8 bits (157), Expect(3) = 2e-025
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA D GV+RVV TSS+ V +P + +D+ CW+D++YC WY +KT+ E+
Sbjct: 387 AAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLTEKA 566
Query: 657 AWEVARKRG 683
AW+ A + G
Sbjct: 567 AWKFAEENG 593
Score = 48.3 bits (99), Expect(3) = 2e-025
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+G TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 54 KGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 167
Score = 40.5 bits (82), Expect(2) = 3e-006
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
S+G T T *P +RRR T E M P APVT TV P
Sbjct: 166 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSP 56
Score = 31.8 bits (63), Expect(2) = 4.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 324 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 431
Score = 31.3 bits (62), Expect(2) = 3e-006
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA WKTP QP A++
Sbjct: 313 VQGEARWKTPEQPRAAAS 260
Score = 30.9 bits (61), Expect(3) = 2e-025
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 375 AFSGCDGVFHAASPVTDD 428
A GC GVFH ASP T D
Sbjct: 267 AARGCSGVFHLASPCTVD 320
Score = 21.7 bits (41), Expect(2) = 4.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H L R PP L PR +P
Sbjct: 86 RLHRLRDRAPPPRPRLLRPRRRPQP 160
>gb|AV931570.1|AV931570 AV931570 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23e18 3', mRNA sequence
Length = 605
Score = 98.7 bits (209), Expect(3) = 3e-025
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3 / -2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 481 NTSAEAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 302
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ +++PE+PVP KC D
Sbjct: 301 VKIIHEMYPEFPVPDKCAD 245
Score = 60.6 bits (126), Expect = 2e-008
Identities = 36/83 (43%), Positives = 39/83 (46%)
Frame = -2 / +3
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+
Sbjct: 246 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKL 425
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP F S L F+VGC
Sbjct: 426 AYVEDDPFINFNIASALVFSVGC 494
Score = 32.7 bits (65), Expect(3) = 3e-025
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 621 WYCYAKTVAEQGAWEVARKRG 683
WY +KT+AE+ AW+ A+ G
Sbjct: 604 WYVLSKTLAEEAAWKFAKDNG 542
Score = 22.6 bits (43), Expect(3) = 3e-025
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 160 LKETIESLKEKGFL 119
>gb|AV934152.1|AV934152 AV934152 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11d04 5', mRNA sequence
Length = 590
Score = 71.6 bits (150), Expect(3) = 3e-025
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3 / +2
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDP 284
S G+ VCVTGA G+IASW+VK LL++GYTV GTVR+ DP
Sbjct: 80 SGAAGKLVCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADP 205
Score = 52.4 bits (108), Expect(2) = 1e-009
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -2 / -3
Query: 286 FGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FGS TVP TV*P SRR LT Q+AM P APVTQT P
Sbjct: 207 FGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQTSFP 91
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+W+ VPD A D VA ++E LD+PG + P +G A+
Sbjct: 208 IWVSGVPDGAMDGVAAVEEELDDPGRDVPGRAGDAD 101
Score = 40.9 bits (83), Expect(3) = 3e-025
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3 / +2
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAE 650
V+ +S + R P VD+T +S E CK Q WY +KT+AE
Sbjct: 446 VITSSMASVIVNGKPRTPDVIVDETWFSLPELCKKNQQWYTLSKTLAE 589
Score = 40.9 bits (83), Expect(3) = 3e-025
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HLRALDG S A GC+ VFHAASPV
Sbjct: 209 KTLHLRALDGANDRLHLFNANLLEEGSFDAAIDGCECVFHAASPV 343
Score = 37.3 bits (75), Expect(2) = 1e-004
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3 / +2
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
D +++ A+ GT V+ + A V+RVV TSS+ +V +N + D W L
Sbjct: 359 DPKAELLDSAVSGTLNVLRSCKKASVRRVVITSSMASVIVNGKPRTPDVIVDETWFSL 532
Score = 31.8 bits (63), Expect(2) = 1e-004
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQAPP LH P H
Sbjct: 121 RVHRVLDRQAPPRPRLHRPWH 183
Score = 30.9 bits (61), Expect(2) = 1e-009
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEAAW T SQP A+++
Sbjct: 342 TGEAAWNTHSQPSMAASK 289
>gb|AV911222.1|AV911222 AV911222 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12h02 3', mRNA sequence
Length = 652
Score = 90.0 bits (190), Expect(2) = 4e-025
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +3 / -2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS + V+ + GS+ T N A +V+VRDVA AH+ YE P A+GRY E H +L
Sbjct: 468 NASVEAVLNLINGSSPTCPNYAHGWVNVRDVALAHILAYEIPSANGRYCIVERVAHYSEL 289
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ K++P P+P KC+D
Sbjct: 288 VKIICKMYPNIPLPDKCED 232
Score = 55.1 bits (114), Expect(2) = 7e-008
Identities = 36/83 (43%), Positives = 39/83 (46%)
Frame = -2 / +2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL G+G G L S LS P A G SY R CA ATSLT T A
Sbjct: 233 SSHLSGSGMFGYILHMILTSSE**ATLSTMQYLPFAEGISYARICARATSLTFTQPWA*L 412
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP+ F T S LA +VGC
Sbjct: 413 GHVGDDPLIRFKTASTLALSVGC 481
Score = 45.5 bits (93), Expect(2) = 4e-025
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3 / -2
Query: 570 VDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVAR 674
VD+T +S E CK Q WY +KT+AE+ AW+ ++
Sbjct: 642 VDETWFSLPELCKKNQQWYTLSKTLAEEAAWKFSK 538
Score = 22.1 bits (42), Expect(2) = 7e-008
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2 / +2
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSST 569
A SA VL Y FLQ S S VSST
Sbjct: 554 AASSARVLDKVYHC*FFLQSSGSENHVSST 643
>gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. vulgare cDNA clone HF15O20
5-PRIME, mRNA sequence
Length = 493
Score = 80.8 bits (170), Expect(2) = 8e-025
Identities = 31/76 (40%), Positives = 46/76 (60%)
Frame = +3 / +3
Query: 456 RGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYA 635
RG + AA D GV+RVV TSS+ V +P + +D+ CW+D++YC WY +
Sbjct: 6 RGLNVLRAAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPAS 185
Query: 636 KTVAEQGAWEVARKRG 683
KT+AE+ AW+ A + G
Sbjct: 186 KTLAEKAAWKFAEENG 233
Score = 53.8 bits (111), Expect(2) = 8e-025
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS ++ L G Y + VHV DVA AH+ ++E P A GR++C E H D
Sbjct: 294 NASMAMFLRLLEGCTEEYKDFFIGPVHVEDVALAHITLFEKPSASGRHLCVEPICHWSDF 473
Query: 924 CRVLAK 941
+A+
Sbjct: 474 ASKVAE 491
>gb|AL450961.1|AL450961 AL450961 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05K15u 5', mRNA sequence
Length = 679
Score = 41.8 bits (85), Expect(5) = 9e-025
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3 / +3
Query: 159 SSGQGRTVCVTGAGGFIASWLVK 227
S G+ VCVTGA G+IASW+VK
Sbjct: 72 SGAAGKLVCVTGASGYIASWIVK 140
Score = 38.2 bits (77), Expect(5) = 9e-025
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3 / +1
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDP 560
D +++ A+ GT V+ + A V+RVV TSS+ +V +N ++P
Sbjct: 349 DPKAELLDSAVSGTLNVLRSCKKASVRRVVITSSMASVIVNGNQEP 486
Score = 37.3 bits (75), Expect(5) = 9e-025
Identities = 19/44 (43%), Positives = 20/44 (45%)
Frame = +3 / +1
Query: 288 NDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
N LRALDG S A GC+ VFHAASPV
Sbjct: 202 NIALRALDGANDRLHLFNANLLEEGSFDAAIDGCECVFHAASPV 333
Score = 36.8 bits (74), Expect(5) = 9e-025
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / +1
Query: 597 EYCKNTQNWYCYAKTVAEQGAWEV 668
E CK Q WY +K +A + AWEV
Sbjct: 526 ELCKKNQQWYTLSKDLAXEAAWEV 597
Score = 31.8 bits (63), Expect(5) = 9e-025
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 234 LEKGYTVRGTVRNPVDP 284
L++GYTV GTVR+ DP
Sbjct: 146 LDRGYTVHGTVRDTADP 196
Score = 30.9 bits (61), Expect(3) = 2e-005
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEAAW T SQP A+++
Sbjct: 332 TGEAAWNTHSQPSMAASK 279
Score = 29.9 bits (59), Expect(3) = 2e-005
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 226 LTSQEAMNPPAPVTQTVRP 170
LT Q+AM P APVTQT P
Sbjct: 139 LTIQDAMYPDAPVTQTSFP 83
Score = 24.4 bits (47), Expect(3) = 2e-005
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEAL 225
+W+ VPD A D VA ++ +L
Sbjct: 199 IWVSGVPDGAMDGVAAVEGSL 137
>gb|BQ467242.1|BQ467242 HS03C04r HS Hordeum vulgare subsp. vulgare cDNA clone HS03C04
5-PRIME, mRNA sequence
Length = 561
Score = 114 bits (244), Expect = 1e-024
Identities = 50/103 (48%), Positives = 60/103 (58%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 165 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTLCRADVLDY 344
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
L AF GC GVFH ASPV++DP+++ + A AD
Sbjct: 345 DGLRAAFCGCHGVFHVASPVSNDPDLVPVAVEGTRNVIRAVAD 473
Score = 69.8 bits (146), Expect(2) = 6e-019
Identities = 35/87 (40%), Positives = 50/87 (57%)
Frame = -1 / -2
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+G R G VEDAV A EG +A+ V+ VGA + E GA++ QV VL + +
Sbjct: 425 HEVGVVGHRRGDVEDAVAAAEGGAEAVVVEDVGAAQGEPFLGALQRQQVRVLAVSGISGG 246
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
+ D VA +E L +PG +E S A+
Sbjct: 245 SPDAVAAEEELLHDPGADEASGPRDAD 165
Score = 59.3 bits (123), Expect = 5e-008
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
++ A+ GTR V+ A DAGV+RVVFTSS G V+M+P R P +D+
Sbjct: 420 LVPVAVEGTRNVIRAVADAGVRRVVFTSSYGAVHMDPNRSPDAVLDE 560
Score = 45.5 bits (93), Expect(2) = 3e-009
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 277 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 164
Score = 45.1 bits (92), Expect(2) = 6e-019
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = -2 / -3
Query: 577 SSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
SS+ G R G M T P +DVNTTR TPAS+ A IT VP
Sbjct: 559 SSSTASGLRLGSMCTAP*DDVNTTRRTPASATALITFLVP 440
Score = 36.3 bits (73), Expect(2) = 3e-009
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTP QP+KA+ R
Sbjct: 403 TGEATWKTPWQPQKAARR 350
>gb|CA001675.1|CA001675 HS05E05r HS Hordeum vulgare subsp. vulgare cDNA clone HS05E05
5-PRIME, mRNA sequence
Length = 496
Score = 114 bits (244), Expect = 1e-024
Identities = 50/103 (48%), Positives = 60/103 (58%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 158 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTLCRADVLDY 337
Query: 360 QSLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
L AF GC GVFH ASPV++DP+++ + A AD
Sbjct: 338 DGLRAAFCGCHGVFHVASPVSNDPDLVPVAVEGTRNVIRAVAD 466
Score = 69.8 bits (146), Expect(2) = 2e-015
Identities = 35/87 (40%), Positives = 50/87 (57%)
Frame = -1 / -1
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+G R G VEDAV A EG +A+ V+ VGA + E GA++ QV VL + +
Sbjct: 418 HEVGVVGHRRGDVEDAVAAAEGGAEAVVVEDVGAAQGEPFLGALQRQQVRVLAVSGISGG 239
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
+ D VA +E L +PG +E S A+
Sbjct: 238 SPDAVAAEEELLHDPGADEASGPRDAD 158
Score = 45.5 bits (93), Expect(2) = 3e-009
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 270 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 157
Score = 39.1 bits (79), Expect = 0.062
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTS 521
++ A+ GTR V+ A DAGV+RVVFTS
Sbjct: 413 LVPVAVEGTRNVIRAVADAGVRRVVFTS 496
Score = 36.3 bits (73), Expect(2) = 3e-009
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA WKTP QP+KA+ R
Sbjct: 396 TGEATWKTPWQPQKAARR 343
Score = 33.1 bits (66), Expect(2) = 2e-015
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -2 / -2
Query: 520 DVNTTRFTPASSAAAIT*RVP 458
DVNTTR TPAS+ A IT VP
Sbjct: 495 DVNTTRRTPASATALITFLVP 433
>gb|BE454559.2|BE454559 HVSMEh0094E03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094E03f, mRNA sequence
Length = 894
Score = 71.6 bits (150), Expect(3) = 2e-024
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDP 284
S G+ VCVTGA G+IASW+VK LL++GYTV GTVR+ DP
Sbjct: 79 SGAAGKLVCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADP 204
Score = 52.4 bits (108), Expect(2) = 1e-009
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -2 / -2
Query: 286 FGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FGS TVP TV*P SRR LT Q+AM P APVTQT P
Sbjct: 206 FGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQTSFP 90
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+W+ VPD A D VA ++E LD+PG + P +G A+
Sbjct: 207 IWVSGVPDGAMDGVAAVEEELDDPGRDVPGRAGDAD 100
Score = 40.9 bits (83), Expect(3) = 2e-024
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +3 / +1
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HLRALDG S A GC+ VFHAASPV
Sbjct: 208 KTLHLRALDGANDRLHLFNANLLEEGSFDAAIDGCECVFHAASPV 342
Score = 38.6 bits (78), Expect(3) = 2e-024
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +3 / +1
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDP 560
D +++ A+ GT V+ + A V+RVV TSS+ +V +N ++P
Sbjct: 358 DPKAELLDSAVSGTLNVLRSCKKASVRRVVITSSMASVIVNGXQEP 495
Score = 31.8 bits (63), Expect = 9.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQAPP LH P H
Sbjct: 120 RVHRVLDRQAPPRPRLHRPWH 182
Score = 30.9 bits (61), Expect(2) = 1e-009
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEAAW T SQP A+++
Sbjct: 341 TGEAAWNTHSQPSMAASK 288
>gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. vulgare cDNA clone HT08G10
5-PRIME, mRNA sequence
Length = 535
Score = 100 bits (214), Expect(2) = 2e-024
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
+I PA+ GT V+ A +A VKRVV SS+ V NP KP+D+ CWSD++YC+ T+
Sbjct: 197 LIAPAVTGTMNVLKACSEAKVKRVVMVSSVAAVMTNPSWPEGKPMDEDCWSDVDYCRTTE 376
Query: 618 NWYCYAKTVAEQGAWEVARKRG 683
NWY +KT+AE A++ A++ G
Sbjct: 377 NWYNLSKTLAELQAFDYAKRSG 442
Score = 50.1 bits (103), Expect(2) = 3e-009
Identities = 32/64 (50%), Positives = 35/64 (54%)
Frame = -2 / -2
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA+VL YQF V LQ S S QQ SS GL + GF+ T ED TT T AS A T
Sbjct: 408 SASVLERLYQFSVVLQ*STSDQQSSSMGLPSGQLGFVMTAATEDTITTLLTLASEQAFRT 229
Query: 469 *RVP 458
VP
Sbjct: 228 FIVP 217
Score = 32.2 bits (64), Expect(2) = 2e-024
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A A +GCD VFH A PV
Sbjct: 107 SMAAAIAGCDVVFHVACPV 163
Score = 31.8 bits (63), Expect = 9.9
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVG 342
D G VED V AG+G A VQQVG
Sbjct: 163 DGAGDVEDDVAAGDGRRHAAVVQQVG 86
Score = 31.8 bits (63), Expect(2) = 3e-009
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG+A WKT SQP A+A L
Sbjct: 162 TGQATWKTTSQPAMAAAML 106
>gb|BG343487.1|BG343487 HVSMEg0005O08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005O08f, mRNA sequence
Length = 949
Score = 65.7 bits (137), Expect(3) = 3e-024
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +3 / +3
Query: 501 KRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKR 680
+RVVFTSS V + ++++ WSD +YC+ WY YAKTVAE+ AW +A +
Sbjct: 372 RRVVFTSSCSCVRYRHHGGGPPTLNESHWSDADYCRTYGLWYAYAKTVAEKEAWRLATEH 551
Query: 681 G 683
G
Sbjct: 552 G 554
Score = 51.5 bits (106), Expect(3) = 3e-024
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +3 / +3
Query: 183 CVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
CVTG GFIAS L++ LL G+TVR TVR+P D
Sbjct: 24 CVTGGTGFIASHLIRALLAAGHTVRATVRDPSD 122
Score = 33.1 bits (66), Expect(3) = 3e-024
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPV 419
S A SG DGVFHAASPV
Sbjct: 207 SFDAAVSGVDGVFHAASPV 263
Score = 31.8 bits (63), Expect(3) = 2e-004
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASAR 365
TG+AAWKTPS P A+++
Sbjct: 262 TGDAAWKTPSTPLTAASK 209
Score = 31.3 bits (62), Expect(3) = 2e-004
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQ 182
S G TV RTV P + +AMNP PVTQ
Sbjct: 121 SLGSRTVARTVCPAANSARIRCDAMNPVPPVTQ 23
Score = 29.0 bits (57), Expect(2) = 0.15
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1 / -3
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQ 297
VEDAV A + QQVGA++ + + GA++ PQ
Sbjct: 248 VEDAVDAAHRRVEGALHQQVGAQQLQPLVGALQLPQ 141
Score = 26.3 bits (51), Expect(2) = 0.15
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1 / -3
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGHA 183
+ RVP R A V Q+ D+ +EP +GHA
Sbjct: 122 VARVPHRGAHRVPGGQQRPDQVRRDEPRPAGHA 24
Score = 24.9 bits (48), Expect(3) = 2e-004
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2 / -1
Query: 661 HAPCSATVLA*QYQFWVFLQYSRSLQ 584
HA SATVLA YQ Q S SLQ
Sbjct: 532 HASFSATVLAYAYQSPYVRQ*SASLQ 455
>gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 5', mRNA sequence
Length = 593
Score = 68.0 bits (142), Expect(2) = 4e-024
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 288 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 467
Query: 924 CRVLAKLFPEYPVP 965
+L L+P Y P
Sbjct: 468 INILKTLYPTYTYP 509
Score = 64.3 bits (134), Expect(2) = 4e-024
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +3 / +3
Query: 471 VMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAE 650
V+ A ++A VKRVV SS V+ NP K + WSD + C+ ++WY +KT AE
Sbjct: 15 VLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAE 194
Query: 651 QGAWEVARKRG 683
+ A+ A K G
Sbjct: 195 REAFAYAAKTG 227
Score = 52.8 bits (109), Expect(2) = 4e-010
Identities = 34/83 (40%), Positives = 40/83 (48%)
Frame = -2 / -2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S+ +G Y G + R S QM RP A G SY R ASATS T T F
Sbjct: 523 SVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLF 344
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
+ V P+RY +LAFTVGC
Sbjct: 343 STVSCSPLRYLRRILLLAFTVGC 275
Score = 32.2 bits (64), Expect(2) = 4e-010
Identities = 24/57 (42%), Positives = 27/57 (47%)
Frame = -2 / -2
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAA 479
SA VL +YQ FL S S Q S L + G + T ED TTR T AS A
Sbjct: 193 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQA 23
>gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005I17f, mRNA sequence
Length = 622
Score = 69.3 bits (145), Expect(3) = 5e-024
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +3
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 153 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 326
Score = 47.8 bits (98), Expect(3) = 5e-024
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGAGGF+ASWLVK LL K +
Sbjct: 84 VCVTGAGGFVASWLVKLLLSKAH 152
Score = 37.3 bits (75), Expect(3) = 5e-024
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3 / +3
Query: 543 NPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
NP K + W+D + C+ ++WY +KT A++G + + + G
Sbjct: 462 NPNWPKGKVFTEDSWADEDLCQKGEDWYLLSKTPAKRGGFCLCHETG 602
Score = 34.5 bits (69), Expect(2) = 3e-005
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA PPAPVT T
Sbjct: 139 RRSLTSHEATKPPAPVTHT 83
Score = 33.6 bits (67), Expect(2) = 3e-005
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR ++DA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 326 DRASNMKDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 147
Query: 239 LQE 231
L E
Sbjct: 146 LGE 138
Score = 31.8 bits (63), Expect(2) = 0.034
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 164 ADSVVGLGEEELDEP*GDEASCAGHAH 84
Score = 25.8 bits (50), Expect(2) = 0.034
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A KTPSQP A A L
Sbjct: 325 TGLAT*KTPSQPATADAML 269
>gb|CA006616.1|CA006616 HU05D06r HU Hordeum vulgare subsp. vulgare cDNA clone HU05D06
5-PRIME, mRNA sequence
Length = 459
Score = 112 bits (239), Expect = 5e-024
Identities = 46/82 (56%), Positives = 58/82 (70%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ A+ GTR V+ AA DAGV+RVVFTSS G V+M+P R P +D+ CWSD ++CKNT
Sbjct: 198 LVPVAVEGTRNVIRAAADAGVRRVVFTSSYGAVHMDPNRSPDAVLDEACWSDYDFCKNTG 377
Query: 618 NWYCYAKTVAEQGAWEVARKRG 683
N YC AK +AE A E A KRG
Sbjct: 378 NLYCCAKMMAEITATEEAAKRG 443
Score = 72.1 bits (151), Expect(2) = 2e-021
Identities = 39/67 (58%), Positives = 44/67 (65%)
Frame = -2 / -3
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAA 479
A SA + A QY+ VFLQ S SLQQ SS+ G R G M T P +DVNTTR TPAS+AA
Sbjct: 418 AVISAIIFAQQYRLPVFLQKS*SLQQASSSTASGLRLGSMCTAP*DDVNTTRRTPASAAA 239
Query: 478 AIT*RVP 458
IT VP
Sbjct: 238 LITFLVP 218
Score = 72.1 bits (151), Expect(2) = 1e-017
Identities = 33/79 (41%), Positives = 41/79 (51%)
Frame = +3 / +3
Query: 252 VRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
VRGT R+P D KN HL AL+G L AF GC GVFH ASPV++DP
Sbjct: 15 VRGTARDPADRKNAHLLALEGAEERLTMCRADVLDYDGLGAAFHGCHGVFHVASPVSNDP 194
Query: 432 EMMIEPAIRGTRYVMAAAD 488
+++ + AAAD
Sbjct: 195 DLVPVAVEGTRNVIRAAAD 251
Score = 51.0 bits (105), Expect(2) = 2e-021
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = -1 / -2
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+GDR G V+DAV A EG +A+ V+ VGA E + ++G QV VL + +
Sbjct: 203 HEVGVVGDRRGDVKDAVAAVEGGAEAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGG 24
Query: 260 AADCVA 243
++D +
Sbjct: 23 SSDAAS 6
Score = 38.6 bits (78), Expect(2) = 1e-017
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2 / +2
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
P P P++ R LLER R+LQ+H + VLLR+D
Sbjct: 305 PQPQPRRRARRGLLERLRLLQKHRQPVLLRED 400
>gb|CA020044.1|CA020044 HV14C19r HV Hordeum vulgare subsp. vulgare cDNA clone HV14C19
5-PRIME, mRNA sequence
Length = 585
Score = 112 bits (239), Expect = 5e-024
Identities = 46/82 (56%), Positives = 58/82 (70%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ A+ GTR V+ AA DAGV+RVVFTSS G V+M+P R P +D+ CWSD ++CKNT
Sbjct: 95 LVPVAVEGTRNVIRAAADAGVRRVVFTSSYGAVHMDPNRSPDAVLDEACWSDYDFCKNTG 274
Query: 618 NWYCYAKTVAEQGAWEVARKRG 683
N YC AK +AE A E A KRG
Sbjct: 275 NLYCCAKMMAEITATEEAAKRG 340
Score = 72.1 bits (151), Expect(2) = 9e-017
Identities = 39/67 (58%), Positives = 44/67 (65%)
Frame = -2 / -1
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAA 479
A SA + A QY+ VFLQ S SLQQ SS+ G R G M T P +DVNTTR TPAS+AA
Sbjct: 315 AVISAIIFAQQYRLPVFLQKS*SLQQASSSTASGLRLGSMCTAP*DDVNTTRRTPASAAA 136
Query: 478 AIT*RVP 458
IT VP
Sbjct: 135 LITFLVP 115
Score = 46.0 bits (94), Expect(2) = 5e-010
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3 / +2
Query: 366 LAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
L AF GC GVFH ASPV++DP+++ + AAAD
Sbjct: 26 LGAAFHGCHGVFHVASPVSNDPDLVPVAVEGTRNVIRAAAD 148
Score = 38.6 bits (78), Expect(2) = 5e-010
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2 / +1
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
P P P++ R LLER R+LQ+H + VLLR+D
Sbjct: 202 PQPQPRRRARRGLLERLRLLQKHRQPVLLRED 297
Score = 35.4 bits (71), Expect(2) = 9e-017
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -1 / -3
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQ 351
H + V+GDR G V+DAV A EG +A+ V+
Sbjct: 100 HEVGVVGDRRGDVKDAVAAVEGGAEAIVVE 11
>gb|BF265665.2|BF265665 HV_CEa0013A06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013A06f, mRNA sequence
Length = 770
Score = 71.6 bits (150), Expect(3) = 7e-024
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3 / +2
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDP 284
S G+ VCVTGA G+IASW+VK LL++GYTV GTVR+ DP
Sbjct: 68 SGAAGKLVCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADP 193
Score = 52.4 bits (108), Expect(2) = 1e-009
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -2 / -3
Query: 286 FGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FGS TVP TV*P SRR LT Q+AM P APVTQT P
Sbjct: 195 FGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQTSFP 79
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+W+ VPD A D VA ++E LD+PG + P +G A+
Sbjct: 196 IWVSGVPDGAMDGVAAVEEELDDPGRDVPGRAGDAD 89
Score = 40.9 bits (83), Expect(3) = 7e-024
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HLRALDG S A GC+ VFHAASPV
Sbjct: 197 KTLHLRALDGANDRLHLFNANLLEEGSFDAAIDGCECVFHAASPV 331
Score = 36.3 bits (73), Expect(3) = 7e-024
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3 / +2
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
D +++ A+ GT V+ + A V+RVV TSS+ +V +N + D W
Sbjct: 347 DPKAELLDSAVSGTLNVLRSCKKASVRRVVITSSMASVIVNGKPRTPDVIVDETW 511
Score = 31.8 bits (63), Expect = 9.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQAPP LH P H
Sbjct: 109 RVHRVLDRQAPPRPRLHRPWH 171
Score = 30.9 bits (61), Expect(2) = 1e-009
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEAAW T SQP A+++
Sbjct: 330 TGEAAWNTHSQPSMAASK 277
>gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002I16f, mRNA sequence
Length = 609
Score = 79.9 bits (168), Expect(3) = 8e-024
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 67 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 198
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 200 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 72
Score = 40.5 bits (82), Expect(3) = 8e-024
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 343 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 513
Score = 39.1 bits (79), Expect(2) = 2e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 198 LGVGGVPDGGADGVAAVEEELDEPGGDVARGAGDAH 91
Score = 35.9 bits (72), Expect(2) = 2e-004
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 114 LHRLLARQAPPPPRLHRPRH 173
Score = 32.7 bits (65), Expect(2) = 2e-004
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3 / +1
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAK 638
+V +S Y R P VD+T +S E C+ ++ CY +
Sbjct: 436 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKHGMCYPR 567
Score = 29.5 bits (58), Expect(2) = 2e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 318 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 208
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 329 GEAVWKTQSQPAMAASKV 276
Score = 28.6 bits (56), Expect(3) = 8e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 289 AIAGCDCVFHTASP 330
>gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i12 5', mRNA sequence
Length = 585
Score = 79.9 bits (168), Expect(3) = 8e-024
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 87 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 218
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 220 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 92
Score = 40.5 bits (82), Expect(3) = 8e-024
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 363 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 533
Score = 40.0 bits (81), Expect(2) = 1e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 218 LGVGGVPDGGADSVAAVEEELDEPGGDVARGAGDAH 111
Score = 35.9 bits (72), Expect(2) = 7e-005
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 134 LHRLLARQAPPPPRLHCPRH 193
Score = 34.1 bits (68), Expect(2) = 7e-005
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3 / +3
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
+V +S Y R P VD+T +S E C+ + WY
Sbjct: 456 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKQWY 575
Score = 29.5 bits (58), Expect(2) = 1e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 338 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 228
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 349 GEAVWKTQSQPAMAASKV 296
Score = 28.6 bits (56), Expect(3) = 8e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 309 AIAGCDCVFHTASP 350
>gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23e18 5', mRNA sequence
Length = 584
Score = 79.9 bits (168), Expect(3) = 8e-024
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 87 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 218
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 220 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 92
Score = 40.5 bits (82), Expect(3) = 8e-024
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 363 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 533
Score = 40.0 bits (81), Expect(2) = 1e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 218 LGVGGVPDGGADSVAAVEEELDEPGGDVARGAGDAH 111
Score = 35.9 bits (72), Expect(2) = 7e-005
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 134 LHRLLARQAPPPPRLHCPRH 193
Score = 34.1 bits (68), Expect(2) = 7e-005
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3 / +3
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
+V +S Y R P VD+T +S E C+ + WY
Sbjct: 456 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNKQWY 575
Score = 29.5 bits (58), Expect(2) = 1e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 338 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 228
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 349 GEAVWKTQSQPAMAASKV 296
Score = 28.6 bits (56), Expect(3) = 8e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 309 AIAGCDCVFHTASP 350
>gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. vulgare cDNA clone HA07C19
5-PRIME, mRNA sequence
Length = 579
Score = 79.9 bits (168), Expect(3) = 8e-024
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 86 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 217
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 219 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 91
Score = 40.5 bits (82), Expect(3) = 8e-024
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 362 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 532
Score = 39.6 bits (80), Expect(2) = 2e-006
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 133 LHRLLARQAPPPPGLHRPRH 192
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -3
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 217 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 110
Score = 35.9 bits (72), Expect(2) = 2e-006
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3 / +2
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
+V +S Y R P VD+T +S E C+ Q WY
Sbjct: 455 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWY 574
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 337 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 227
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 348 GEAVWKTQSQPAMAASKV 295
Score = 28.6 bits (56), Expect(3) = 8e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 308 AIAGCDCVFHTASP 349
>gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. vulgare cDNA clone HF11K09
5-PRIME, mRNA sequence
Length = 571
Score = 79.9 bits (168), Expect(3) = 8e-024
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 80 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 211
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 213 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 85
Score = 40.5 bits (82), Expect(3) = 8e-024
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 356 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 526
Score = 39.6 bits (80), Expect(2) = 2e-006
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 127 LHRLLARQAPPPPGLHRPRH 186
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 211 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 104
Score = 35.9 bits (72), Expect(2) = 2e-006
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3 / +2
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
+V +S Y R P VD+T +S E C+ Q WY
Sbjct: 449 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWY 568
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 331 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 221
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 342 GEAVWKTQSQPAMAASKV 289
Score = 28.6 bits (56), Expect(3) = 8e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 302 AIAGCDCVFHTASP 343
>gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14G15
5-PRIME, mRNA sequence
Length = 568
Score = 79.9 bits (168), Expect(3) = 8e-024
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 100 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 231
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 233 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 105
Score = 40.5 bits (82), Expect(3) = 8e-024
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 376 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 546
Score = 39.6 bits (80), Expect(2) = 0.002
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 147 LHRLLARQAPPPPGLHRPRH 206
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 231 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 124
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 351 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 241
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 362 GEAVWKTQSQPAMAASKV 309
Score = 28.6 bits (56), Expect(3) = 8e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 322 AIAGCDCVFHTASP 363
Score = 24.9 bits (48), Expect(2) = 0.002
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3 / +1
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYC 605
+V +S Y R P VD+T +S E C
Sbjct: 469 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVC 567
>gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. vulgare cDNA clone HS04D07
5-PRIME, mRNA sequence
Length = 563
Score = 79.9 bits (168), Expect(3) = 8e-024
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 70 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 201
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 203 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 75
Score = 40.5 bits (82), Expect(3) = 8e-024
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 346 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 516
Score = 39.6 bits (80), Expect(2) = 2e-006
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 117 LHRLLARQAPPPPGLHRPRH 176
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -3
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 201 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 94
Score = 35.9 bits (72), Expect(2) = 2e-006
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3 / +1
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
+V +S Y R P VD+T +S E C+ Q WY
Sbjct: 439 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWY 558
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 321 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 211
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 332 GEAVWKTQSQPAMAASKV 279
Score = 28.6 bits (56), Expect(3) = 8e-024
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 292 AIAGCDCVFHTASP 333
>gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL86g1 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 711
Score = 69.3 bits (145), Expect(3) = 1e-023
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA D GV+RVV TSS+ V +P + + + CW+D++YC WY KT+ E+
Sbjct: 429 AAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLHERCWTDIDYCDKNGVWYPA*KTLTEKA 608
Query: 657 AWEVARKRG 683
AW+ A + G
Sbjct: 609 AWKFAEENG 635
Score = 48.3 bits (99), Expect(3) = 1e-023
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+G TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 96 KGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 209
Score = 40.5 bits (82), Expect(2) = 8e-005
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
S+G T T *P +RRR T E M P APVT TV P
Sbjct: 208 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSP 98
Score = 31.8 bits (63), Expect(2) = 4.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 366 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 473
Score = 30.9 bits (61), Expect(3) = 1e-023
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / +3
Query: 375 AFSGCDGVFHAASPVTDD 428
A GC GVFH ASP T D
Sbjct: 309 AARGCSGVFHLASPCTVD 362
Score = 26.3 bits (51), Expect(2) = 8e-005
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA W TP P A++
Sbjct: 355 VQGEARWXTPEHPRAAAS 302
Score = 21.7 bits (41), Expect(2) = 4.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H L R PP L PR +P
Sbjct: 128 RLHRLRDRAPPPRPRLLRPRRRPQP 202
>gb|CA006217.1|CA006217 HU05D06u HU Hordeum vulgare subsp. vulgare cDNA clone HU05D06
3-PRIME, mRNA sequence
Length = 548
Score = 79.9 bits (168), Expect(3) = 1e-023
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3 / -3
Query: 867 PHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMD 1046
P A GRY+C + LHR ++L LFP+Y V KC+D P YKF+N+RL++LG++
Sbjct: 456 PDARGRYLCIGAVLHRAHFLQLLGDLFPQYHVTAKCEDDGKPMEKPYKFSNRRLRELGLE 277
Query: 1047 FVPV 1058
F P+
Sbjct: 276 FTPL 265
Score = 64.3 bits (134), Expect(2) = 3e-012
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = -1 / +1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P V ELV + +V ALGGY VLREE+ E+ EV AVQ A VAA
Sbjct: 268 RSELQSQLPQPSVRELVRLLHGLAIVFALGGYVVLREEVAEELEEVGAVQHGADAKVAAA 447
Query: 875 RVG 867
RVG
Sbjct: 448 RVG 456
Score = 49.6 bits (102), Expect = 4e-005
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -2 / +2
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL NLY + GL S HL T Y GK R+ ++ RC Q *RP
Sbjct: 269 GVNSNPSSLSLRFENLYGFSMGLPSSSHLAVTWYCGKRSPRSWRKWARCNTAPMQR*RPR 448
Query: 874 AWG 866
A G
Sbjct: 449 ASG 457
Score = 41.4 bits (84), Expect(3) = 1e-023
Identities = 18/27 (66%), Positives = 18/27 (66%)
Frame = +3 / -2
Query: 789 TTYVNAAQAYVHVRDVAEAHVRVYEAP 869
TT NA AY VRDVA AHV VYE P
Sbjct: 535 TTLPNAVAAYTDVRDVARAHVLVYEHP 455
Score = 27.6 bits (54), Expect(2) = 3e-012
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -2 / +3
Query: 868 GASYTRTCASATSLTCTYACAAFT*VV 788
G S TRTCA ATS T A A VV
Sbjct: 456 GCS*TRTCARATSRTSV*AATALGRVV 536
Score = 27.2 bits (53), Expect(3) = 1e-023
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 1061 QCLYETVTSLQEKGML 1108
+ LYETVT LQ+KG L
Sbjct: 261 ESLYETVTCLQKKGHL 214
>gb|BM097482.2|BM097482 EBro05_SQ003_L07_R root, 3 week, reduced light, cv Optic, EBro05
Hordeum vulgare subsp. vulgare cDNA clone
EBro05_SQ003_L07 5', mRNA sequence
Length = 353
Score = 110 bits (235), Expect = 2e-023
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G+G TVCVTGAGG+IASWLVK LL +GYTVRGTVR+ + K HLR+L+
Sbjct: 43 GKGETVCVTGAGGYIASWLVKLLLSRGYTVRGTVRDLGEKKTGHLRSLENASENLKLIKA 222
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPV 419
++A A GC GVFH ASPV
Sbjct: 223 DLLDNDAMAAAIEGCQGVFHVASPV 297
Score = 61.6 bits (128), Expect(2) = 1e-011
Identities = 28/44 (63%), Positives = 28/44 (63%)
Frame = -2 / -1
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
W F S TVPRTV*P RR TS EAM PPAPVT TV P P
Sbjct: 173 WPVFFSPRSRTVPRTV*PRERRSFTSHEAMYPPAPVTHTVSPFP 42
Score = 49.2 bits (101), Expect = 6e-005
Identities = 25/80 (31%), Positives = 46/80 (57%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
+R G +E+++ + G + ++Q+G ++ E + PQ+ L + +V D AAD VA
Sbjct: 297 NRAGDMENSLASLYGSRHRVIIEQIGLDKLEIFRCVL*RPQMAGLLLAKVADGAADGVAA 118
Query: 239 LQEALDEPGGNEPSSSGHAN 180
+E L EP G+ P+ +G A+
Sbjct: 117 GEEELHEPRGDVPAGAGDAH 58
Score = 37.7 bits (76), Expect = 0.16
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH L+AR+APP LH PRH P
Sbjct: 78 RVHRLVAREAPPLPRLHRPRHRPRP 152
Score = 28.6 bits (56), Expect(2) = 1e-011
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2 / -1
Query: 460 PRXXXXXXXXXXSVTGEAAWKTPSQPEKASA 368
PR TG A WKTP P A+A
Sbjct: 338 PRTSTSGSVTSPVGTGLATWKTPWHPSMAAA 246
>gb|BG415622.2|BG415622 HVSMEk0007D09f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007D09f, mRNA sequence
Length = 644
Score = 83.5 bits (176), Expect(3) = 2e-023
Identities = 36/88 (40%), Positives = 49/88 (55%)
Frame = +3 / +2
Query: 414 PVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSD 593
P D ++ PA+ G V+ AA D+GVKRVV SS + NP K +DD W+D
Sbjct: 119 PAQDPENELLLPAVNGALNVLRAAKDSGVKRVVMVSSQTAMCPNPDWPADKVIDDDSWAD 298
Query: 594 LEYCKNTQNWYCYAKTVAEQGAWEVARK 677
E K + WY +KT+AE+ AW+ RK
Sbjct: 299 PEILKKLELWYNVSKTLAEKAAWDFVRK 382
Score = 38.2 bits (77), Expect(3) = 2e-023
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3 / +2
Query: 819 VHVRDVAEAHVRVYEAPHAHGRYICAE 899
V VRDVA + V +YE+P A GR++C E
Sbjct: 524 VDVRDVAHSLVVLYESPSAQGRHLCME 604
Score = 30.9 bits (61), Expect(3) = 2e-023
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3 / +2
Query: 357 PQSLAEAFSGCDGVFHAASPVTDDP 431
P S+ A G GVFH ASPV P
Sbjct: 47 PASVRPAIEGVHGVFHLASPVILQP 121
Score = 27.6 bits (54), Expect(2) = 2.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKA 374
+TGEA WKTP P A
Sbjct: 111 ITGEARWKTPWTPSIA 64
Score = 26.7 bits (52), Expect(2) = 2.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -3
Query: 883 RPCAWGASYTRTCASATSLTCT 818
RPCA G S + T ATSLT T
Sbjct: 588 RPCADGLS*STTRECATSLTST 523
>gb|BF628107.2|BF628107 HVSMEb0003C11f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0003C11f, mRNA sequence
Length = 495
Score = 79.9 bits (168), Expect(3) = 2e-023
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 66 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 197
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 199 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 71
Score = 39.1 bits (79), Expect(3) = 2e-023
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMN 545
V D +++PA+ GT V+ + A +KRV+ TSS+ V N
Sbjct: 342 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYN 470
Score = 39.1 bits (79), Expect(2) = 2e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 197 LGVGGVPDGGADGVAAVEEELDEPGGDVARGAGDAH 90
Score = 35.9 bits (72), Expect = 0.57
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 113 LHRLLARQAPPPPRLHRPRH 172
Score = 29.5 bits (58), Expect(2) = 2e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -2
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 317 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 207
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 328 GEAVWKTQSQPAMAASKV 275
Score = 28.6 bits (56), Expect(3) = 2e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 288 AIAGCDCVFHTASP 329
>gb|BU980008.1|BU980008 HA18D04r HA Hordeum vulgare subsp. vulgare cDNA clone HA18D04
5-PRIME, mRNA sequence
Length = 459
Score = 95.0 bits (201), Expect(2) = 3e-023
Identities = 41/82 (50%), Positives = 48/82 (58%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTG GFI S LVK LL +GY V TVR+P DPKN L LDG
Sbjct: 86 VCVTGGNGFIGSCLVKLLLSRGYAVHATVRDPRDPKNAFLTELDGAPANLRLFKADVLDY 265
Query: 360 QSLAEAFSGCDGVFHAASPVTD 425
++ AF+GC+GVFH A+PV D
Sbjct: 266 DTVTAAFAGCEGVFHVATPVPD 331
Score = 52.8 bits (109), Expect = 4e-006
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = -1 / -3
Query: 425 IGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCV 246
+G R G +EDA+ AGEG + V+ V E+ + G+V+ Q VL + V D D V
Sbjct: 331 VGHRSGDMEDALAAGEGGRHGVVVEHVRLEQPQVRRGSVQLRQERVLRVTWVADGGVDGV 152
Query: 245 ALLQEALDEPGGNEPSSSGHAN 180
A +E LDE E ++G A+
Sbjct: 151 AAGEEQLDEARAYEAVAAGDAH 86
Score = 40.9 bits (83), Expect(2) = 3e-006
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+FFGS G TV T *P R LT E M P PVT T
Sbjct: 198 AFFGSRGSRTVAWTA*PRERSSLTRHEPMKPLPPVTHT 85
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGT 533
+ D + M+EPA++GT V+ A V +++ SSI T
Sbjct: 338 MVDPQKEMMEPAVKGTMNVLKACSATKVHKLIVVSSIAT 454
Score = 33.1 bits (66), Expect(2) = 3e-006
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKAS 371
TG A WKTPSQP KA+
Sbjct: 324 TGVATWKTPSQPAKAA 277
>gb|CA003151.1|CA003151 HS09J04r HS Hordeum vulgare subsp. vulgare cDNA clone HS09J04
5-PRIME, mRNA sequence
Length = 417
Score = 95.0 bits (201), Expect(2) = 3e-023
Identities = 41/82 (50%), Positives = 48/82 (58%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTG GFI S LVK LL +GY V TVR+P DPKN L LDG
Sbjct: 44 VCVTGGNGFIGSCLVKLLLSRGYAVHATVRDPRDPKNAFLTELDGAPANLRLFKADVLDY 223
Query: 360 QSLAEAFSGCDGVFHAASPVTD 425
++ AF+GC+GVFH A+PV D
Sbjct: 224 DTVTAAFAGCEGVFHVATPVPD 289
Score = 52.8 bits (109), Expect = 4e-006
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = -1 / -3
Query: 425 IGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCV 246
+G R G +EDA+ AGEG + V+ V E+ + G+V+ Q VL + V D D V
Sbjct: 289 VGHRSGDMEDALAAGEGGRHGVVVEHVRLEQPQVRRGSVQLRQERVLRVTWVADGGVDGV 110
Query: 245 ALLQEALDEPGGNEPSSSGHAN 180
A +E LDE E ++G A+
Sbjct: 109 AAGEEQLDEARAYEAVAAGDAH 44
Score = 40.9 bits (83), Expect(2) = 3e-006
Identities = 20/38 (52%), Positives = 21/38 (55%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+FFGS G TV T *P R LT E M P PVT T
Sbjct: 156 AFFGSRGSRTVAWTA*PRERSSLTRHEPMKPLPPVTHT 43
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGT 533
+ D + M+EPA++GT V+ A V +++ SSI T
Sbjct: 296 MVDPQKEMMEPAVKGTMNVLKACSATKVHKLIVVSSIAT 412
Score = 33.1 bits (66), Expect(2) = 3e-006
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKAS 371
TG A WKTPSQP KA+
Sbjct: 282 TGVATWKTPSQPAKAA 235
>gb|BF259786.2|BF259786 HVSMEf0020E05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020E05f, mRNA sequence
Length = 534
Score = 79.0 bits (166), Expect(3) = 4e-023
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+I SWLVK LL +GYTVR TVR+ VDPK
Sbjct: 94 MSSGMGKVVCVTGASGYIDSWLVKLLLHRGYTVRATVRDTVDPK 225
Score = 57.0 bits (118), Expect(2) = 1e-010
Identities = 28/43 (65%), Positives = 29/43 (67%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GST TV RTV*P RR LTSQE+M P APVT T P PE
Sbjct: 227 FLGSTVSRTVARTV*PRWRRSLTSQESM*PEAPVTHTTFPIPE 99
Score = 39.1 bits (79), Expect(3) = 4e-023
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMN 545
V D +++PA+ GT V+ + A +KRV+ TSS+ V N
Sbjct: 370 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYN 498
Score = 35.9 bits (72), Expect = 0.57
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 141 LHRLLARQAPPPPRLHRPRH 200
Score = 35.4 bits (71), Expect(2) = 3e-004
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPG + +G A+
Sbjct: 225 LGVDGVPDGGADGVAAVEEELDEPGVDVARGAGDAH 118
Score = 29.5 bits (58), Expect(2) = 3e-004
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 345 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 235
Score = 29.5 bits (58), Expect(2) = 1e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 356 GEAVWKTQSQPAMAASKV 303
Score = 28.6 bits (56), Expect(3) = 4e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 316 AIAGCDCVFHTASP 357
>gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N22f, mRNA sequence
Length = 873
Score = 67.0 bits (140), Expect(3) = 5e-023
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
VCVTGA GF+ASWLVKRLLE GY V GTVR+P + K
Sbjct: 37 VCVTGASGFVASWLVKRLLESGYHVLGTVRDPGNQK 144
Score = 55.1 bits (114), Expect(3) = 5e-023
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +3 / +1
Query: 558 PSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
P+ +D+T WS +E+C++ Q WY AK +AE+ AWE A++
Sbjct: 436 PNVLLDETSWSSVEFCESIQIWYAVAKILAEKSAWEFAKE 555
Score = 51.9 bits (107), Expect(2) = 3e-009
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
+FF G LTVPRT P SR RLTSQEA P APVT T+
Sbjct: 149 TFF*LPGSLTVPRT*YPDSRSRLTSQEATKPEAPVTHTL 33
Score = 37.7 bits (76), Expect = 0.16
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2 / +3
Query: 557 PQQACGRHLLERPRVLQEHPELVLLRQD 640
PQ+A G +++E RVL++HP++V RQD
Sbjct: 435 PQRAAG*NIMELRRVLRKHPDMVRCRQD 518
Score = 29.9 bits (59), Expect(2) = 3e-009
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G+A WKTPSQ AS++L
Sbjct: 275 GDAVWKTPSQAITASSKL 222
Score = 29.9 bits (59), Expect(3) = 5e-023
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A C+GVFH ASP+
Sbjct: 223 SFDDAVMACEGVFHTASPI 279
>gb|BJ544054.1|BJ544054 BJ544054 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak18h07 5', mRNA sequence
Length = 521
Score = 71.6 bits (150), Expect(3) = 5e-023
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3 / +2
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDP 284
S G+ VCVTGA G+IASW+VK LL++GYTV GTVR+ DP
Sbjct: 35 SGAAGKLVCVTGASGYIASWIVKLLLDRGYTVHGTVRDTADP 160
Score = 52.4 bits (108), Expect(2) = 1e-009
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -2 / -3
Query: 286 FGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FGS TVP TV*P SRR LT Q+AM P APVTQT P
Sbjct: 162 FGSAVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQTSFP 46
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+W+ VPD A D VA ++E LD+PG + P +G A+
Sbjct: 163 IWVSGVPDGAMDGVAAVEEELDDPGRDVPGRAGDAD 56
Score = 40.9 bits (83), Expect(3) = 5e-023
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HLRALDG S A GC+ VFHAASPV
Sbjct: 164 KTLHLRALDGANDRLHLFNANLLEEGSFDAAIDGCECVFHAASPV 298
Score = 33.6 bits (67), Expect(3) = 5e-023
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3 / +2
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
VV +S ++ R P VD+T +S E CK Q WY
Sbjct: 401 VVTSSMSSALFTGKPRTPDVIVDETWFSLPELCKKNQQWY 520
Score = 31.8 bits (63), Expect(2) = 0.004
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3 / +2
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDL 596
D +++ A+ GT V+ + A V+RVV TSS+ + + D W L
Sbjct: 314 DPKAELLDSAVSGTLNVLRSCKKASVRRVVVTSSMSSALFTGKPRTPDVIVDETWFSL 487
Score = 31.8 bits (63), Expect(2) = 0.004
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQAPP LH P H
Sbjct: 76 RVHRVLDRQAPPRPRLHRPWH 138
Score = 30.9 bits (61), Expect(2) = 1e-009
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEAAW T SQP A+++
Sbjct: 297 TGEAAWNTHSQPSMAASK 244
>gb|CA021911.1|CA021911 HZ41I09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ41I09
5-PRIME, mRNA sequence
Length = 414
Score = 79.9 bits (168), Expect(3) = 5e-023
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 13 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 144
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 146 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 18
Score = 39.6 bits (80), Expect = 0.045
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 60 LHRLLARQAPPPPGLHRPRH 119
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 144 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 37
Score = 37.7 bits (76), Expect(3) = 5e-023
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTV 536
V D +++PA+ GT V+ + A +KRV+ TSS+ V
Sbjct: 289 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAV 408
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 264 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 154
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 275 GEAVWKTQSQPAMAASKV 222
Score = 28.6 bits (56), Expect(3) = 5e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 235 AIAGCDCVFHTASP 276
>gb|BQ767762.1|BQ767762 EBro08_SQ009_D21 _R root, 3 week, drought-stressed, cv Optic,
EBro08 Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_D21 5', mRNA sequence
Length = 434
Score = 109 bits (232), Expect = 5e-023
Identities = 45/78 (57%), Positives = 52/78 (66%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G G+TVCVTGA G+IASWLVK LLE+GYTV+GTVRNP DPKN HL+ALDG
Sbjct: 113 GHGQTVCVTGAAGYIASWLVKLLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKA 292
Query: 345 XXXXPQSLAEAFSGCDGV 398
++ A GC GV
Sbjct: 293 DLLDYDAICAAVEGCHGV 346
Score = 73.9 bits (155), Expect = 2e-012
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
+FFGS+GFLTVP TV*P SR LTS +AM P APVT TV PCP
Sbjct: 240 AFFGSSGFLTVPLTV*PLSRSSLTSHDAMYPAAPVTHTVCPCP 112
Score = 58.8 bits (122), Expect = 7e-008
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = -1 / -2
Query: 395 AVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEP 216
AV A +G + V++VG ED+ + GAV+ QV +L + VP A D VA LQE LDEP
Sbjct: 343 AVAALDGGADGVVVEEVGLAEDQPLGGAVQRLQVCILRVIWVPHCALDGVAPLQEQLDEP 164
Query: 215 GGNEPSSSGHAN 180
+ P +G A+
Sbjct: 163 RRDVPGGAGDAH 128
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
RVH ++ARQA PGEGLH H +EP
Sbjct: 148 RVHRVVARQAAPGEGLHRQGHSEEP 222
Score = 33.6 bits (67), Expect = 2.8
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGTLWIQRTTT* 300
P G+ GSSS SWR AT S A+ GT +R T*
Sbjct: 138 PAPPGTSRRGSSSCSWRGATPSRAQ*GTQMTRRMHT* 248
>gb|CA004585.1|CA004585 HS18B01r HS Hordeum vulgare subsp. vulgare cDNA clone HS18B01
5-PRIME, mRNA sequence
Length = 456
Score = 109 bits (232), Expect = 5e-023
Identities = 46/83 (55%), Positives = 52/83 (62%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 207 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEGAEERLTMCRADVLDY 386
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
L AF GC GVFH ASPV++D
Sbjct: 387 DGLGAAFHGCHGVFHVASPVSND 455
Score = 68.4 bits (143), Expect = 9e-011
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = -1 / -2
Query: 428 VIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADC 249
V+GDR G V+DAV A EG +A+ V+ VGA E + ++G QV VL + + ++D
Sbjct: 455 VVGDRRGDVKDAVAAVEGGAEAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGGSSDA 276
Query: 248 VALLQEALDEPGGNEPSSSGHAN 180
VA +E L PG +E S + HA+
Sbjct: 275 VAAEEELLHHPGADEASRTRHAD 207
Score = 45.5 bits (93), Expect(2) = 1e-006
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 319 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 206
Score = 27.2 bits (53), Expect(2) = 1e-006
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEA KTP QP KA+ R
Sbjct: 445 TGEAT*KTPWQPWKAAPR 392
>gb|BQ663162.1|BQ663162 HU01A05w HU Hordeum vulgare subsp. vulgare cDNA clone HU01A05
3-PRIME, mRNA sequence
Length = 599
Score = 79.9 bits (168), Expect(3) = 9e-023
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3 / -3
Query: 867 PHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMD 1046
P A GRY+C + LHR ++L LFP+Y V KC+D P YKF+N+RL++LG++
Sbjct: 456 PDARGRYLCIGAVLHRAHFLQLLGDLFPQYHVTAKCEDDGKPMEKPYKFSNRRLRELGLE 277
Query: 1047 FVPV 1058
F P+
Sbjct: 276 FTPL 265
Score = 64.3 bits (134), Expect(2) = 6e-012
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = -1 / +1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P V ELV + +V ALGGY VLREE+ E+ EV AVQ A VAA
Sbjct: 268 RSELQSQLPQPSVRELVRLLHGLAIVFALGGYVVLREEVAEELEEVGAVQHGADAKVAAA 447
Query: 875 RVG 867
RVG
Sbjct: 448 RVG 456
Score = 49.2 bits (101), Expect = 6e-005
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -2 / +2
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL NLY + GL S HL T Y GK R+ ++ RC Q *RP
Sbjct: 269 GVNSNPSSLSLRFENLYGFSMGLPSSSHLAVTWYCGKRSPRSWRKWARCSTAPMQR*RPR 448
Query: 874 AWG 866
A G
Sbjct: 449 ASG 457
Score = 38.2 bits (77), Expect(3) = 9e-023
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 801 NAAQAYVHVRDVAEAHVRVYEAP 869
NA AY VRDVA AHV VYE P
Sbjct: 523 NAVAAYTDVRDVARAHVLVYEHP 455
Score = 27.2 bits (53), Expect(3) = 9e-023
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 1061 QCLYETVTSLQEKGML 1108
+ LYETVT LQ+KG L
Sbjct: 261 ESLYETVTCLQKKGHL 214
Score = 26.7 bits (52), Expect(2) = 6e-012
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / +3
Query: 868 GASYTRTCASATSLTCTYACAA 803
G S TRTCA ATS T A A
Sbjct: 456 GCS*TRTCARATSRTSV*AATA 521
>gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021K17f, mRNA sequence
Length = 592
Score = 62.0 bits (129), Expect(3) = 9e-023
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +3 / +2
Query: 255 RGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
RGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 122 RGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 286
Score = 42.8 bits (87), Expect(3) = 9e-023
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3 / +3
Query: 543 NPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
NP +K + WSD + CK ++WY +KT A++ A+ A K G
Sbjct: 426 NPNWPKAKVFTEDSWSDKDLCKKGEDWYLLSKTRAKREAFAYAAKTG 566
Score = 40.5 bits (82), Expect(3) = 9e-023
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3 / +2
Query: 420 TDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVY 539
T+ E +I PA+ GT V+ A ++A VKRVV SS V+
Sbjct: 302 TNPEEEVIAPAVTGTLNVLKACNEAXVKRVVIVSSCAAVF 421
Score = 32.7 bits (65), Expect = 5.3
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 285 TGLATWKTPSQPATADAML 229
>gb|BQ663264.1|BQ663264 HU01M14w HU Hordeum vulgare subsp. vulgare cDNA clone HU01M14
3-PRIME, mRNA sequence
Length = 585
Score = 79.9 bits (168), Expect(3) = 9e-023
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3 / -1
Query: 867 PHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMD 1046
P A GRY+C + LHR ++L LFP+Y V KC+D P YKF+N+RL++LG++
Sbjct: 462 PDARGRYLCIGAVLHRAHFLQLLGDLFPQYHVTAKCEDDGKPMEKPYKFSNRRLRELGLE 283
Query: 1047 FVPV 1058
F P+
Sbjct: 282 FTPL 271
Score = 65.7 bits (137), Expect(2) = 2e-012
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = -1 / +1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P V ELV + +V ALGGY VLREE+ E+ EV AVQ A+VAA
Sbjct: 274 RSELQSQLPQPSVRELVRLLHGLAIVFALGGYVVLREEVAEELEEVGAVQHGADAEVAAA 453
Query: 875 RVG 867
RVG
Sbjct: 454 RVG 462
Score = 49.2 bits (101), Expect = 6e-005
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -2 / +2
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL NLY + GL S HL T Y GK R+ ++ RC Q *RP
Sbjct: 275 GVNSNPSSLSLRFENLYGFSMGLPSSSHLAVTWYCGKRSPRSWRKWARCSTAPMQR*RPR 454
Query: 874 AWG 866
A G
Sbjct: 455 ASG 463
Score = 38.2 bits (77), Expect(3) = 9e-023
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +3 / -3
Query: 801 NAAQAYVHVRDVAEAHVRVYEAP 869
NA AY VRDVA AHV VYE P
Sbjct: 529 NAVAAYTDVRDVARAHVLVYEHP 461
Score = 27.2 bits (53), Expect(3) = 9e-023
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 1061 QCLYETVTSLQEKGML 1108
+ LYETVT LQ+KG L
Sbjct: 267 ESLYETVTCLQKKGHL 220
Score = 26.7 bits (52), Expect(2) = 2e-012
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / +3
Query: 868 GASYTRTCASATSLTCTYACAA 803
G S TRTCA ATS T A A
Sbjct: 462 GCS*TRTCARATSRTSV*AATA 527
>gb|CA010747.1|CA010747 HT08M24u HT Hordeum vulgare subsp. vulgare cDNA clone HT08M24
3-PRIME, mRNA sequence
Length = 554
Score = 79.9 bits (168), Expect(3) = 9e-023
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3 / -3
Query: 867 PHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMD 1046
P A GRY+C + LHR ++L LFP+Y V KC+D P YKF+N+RL++LG++
Sbjct: 456 PDARGRYLCIGAVLHRAHFLQLLGDLFPQYHVTAKCEDDGKPMEKPYKFSNRRLRELGLE 277
Query: 1047 FVPV 1058
F P+
Sbjct: 276 FTPL 265
Score = 65.7 bits (137), Expect(2) = 2e-012
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = -1 / +1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P V ELV + +V ALGGY VLREE+ E+ EV AVQ A+VAA
Sbjct: 268 RSELQSQLPQPSVRELVRLLHGLAIVFALGGYVVLREEVAEELEEVGAVQHGADAEVAAA 447
Query: 875 RVG 867
RVG
Sbjct: 448 RVG 456
Score = 49.2 bits (101), Expect = 6e-005
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -2 / +2
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL NLY + GL S HL T Y GK R+ ++ RC Q *RP
Sbjct: 269 GVNSNPSSLSLRFENLYGFSMGLPSSSHLAVTWYCGKRSPRSWRKWARCSTAPMQR*RPR 448
Query: 874 AWG 866
A G
Sbjct: 449 ASG 457
Score = 38.2 bits (77), Expect(3) = 9e-023
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 801 NAAQAYVHVRDVAEAHVRVYEAP 869
NA AY VRDVA AHV VYE P
Sbjct: 523 NAVAAYTDVRDVARAHVLVYEHP 455
Score = 27.2 bits (53), Expect(3) = 9e-023
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 1061 QCLYETVTSLQEKGML 1108
+ LYETVT LQ+KG L
Sbjct: 261 ESLYETVTCLQKKGHL 214
Score = 26.7 bits (52), Expect(2) = 2e-012
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / +3
Query: 868 GASYTRTCASATSLTCTYACAA 803
G S TRTCA ATS T A A
Sbjct: 456 GCS*TRTCARATSRTSV*AATA 521
>gb|CA000392.1|CA000392 HS08M20u HS Hordeum vulgare subsp. vulgare cDNA clone HS08M20
3-PRIME, mRNA sequence
Length = 545
Score = 79.9 bits (168), Expect(3) = 9e-023
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3 / -3
Query: 867 PHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMD 1046
P A GRY+C + LHR ++L LFP+Y V KC+D P YKF+N+RL++LG++
Sbjct: 456 PDARGRYLCIGAVLHRAHFLQLLGDLFPQYHVTAKCEDDGKPMEKPYKFSNRRLRELGLE 277
Query: 1047 FVPV 1058
F P+
Sbjct: 276 FTPL 265
Score = 64.3 bits (134), Expect(2) = 6e-012
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = -1 / +1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P V ELV + +V ALGGY VLREE+ E+ EV AVQ A VAA
Sbjct: 268 RSELQSQLPQPSVRELVRLLHGLAIVFALGGYVVLREEVAEELEEVGAVQHGADAKVAAA 447
Query: 875 RVG 867
RVG
Sbjct: 448 RVG 456
Score = 49.6 bits (102), Expect = 4e-005
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -2 / +2
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL NLY + GL S HL T Y GK R+ ++ RC Q *RP
Sbjct: 269 GVNSNPSSLSLRFENLYGFSMGLPSSSHLAVTWYCGKRSPRSWRKWARCNTAPMQR*RPR 448
Query: 874 AWG 866
A G
Sbjct: 449 ASG 457
Score = 38.2 bits (77), Expect(3) = 9e-023
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 801 NAAQAYVHVRDVAEAHVRVYEAP 869
NA AY VRDVA AHV VYE P
Sbjct: 523 NAVAAYTDVRDVARAHVLVYEHP 455
Score = 27.2 bits (53), Expect(3) = 9e-023
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 1061 QCLYETVTSLQEKGML 1108
+ LYETVT LQ+KG L
Sbjct: 261 ESLYETVTCLQKKGHL 214
Score = 26.7 bits (52), Expect(2) = 6e-012
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / +3
Query: 868 GASYTRTCASATSLTCTYACAA 803
G S TRTCA ATS T A A
Sbjct: 456 GCS*TRTCARATSRTSV*AATA 521
>gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. vulgare cDNA clone HA08A23
5-PRIME, mRNA sequence
Length = 497
Score = 79.9 bits (168), Expect(3) = 2e-022
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 105 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 236
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 238 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 110
Score = 39.6 bits (80), Expect = 0.045
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 152 LHRLLARQAPPPPGLHRPRH 211
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 236 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 129
Score = 35.9 bits (72), Expect(3) = 2e-022
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSI 527
V D +++PA+ GT V+ + A +KRV+ TSS+
Sbjct: 381 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSM 491
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 356 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 246
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 367 GEAVWKTQSQPAMAASKV 314
Score = 28.6 bits (56), Expect(3) = 2e-022
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +3
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 327 AIAGCDCVFHTASP 368
>gb|CA013550.1|CA013550 HT08M24r HT Hordeum vulgare subsp. vulgare cDNA clone HT08M24
5-PRIME, mRNA sequence
Length = 544
Score = 79.9 bits (168), Expect(3) = 2e-022
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3 / +2
Query: 867 PHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMD 1046
P A GRY+C + LHR ++L LFP+Y V KC+D P YKF+N+RL++LG++
Sbjct: 89 PDARGRYLCIGAVLHRAHFLQLLGDLFPQYHVTAKCEDDGKPMEKPYKFSNRRLRELGLE 268
Query: 1047 FVPV 1058
F P+
Sbjct: 269 FTPL 280
Score = 65.7 bits (137), Expect(2) = 1e-012
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = -1 / -1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P V ELV + +V ALGGY VLREE+ E+ EV AVQ A+VAA
Sbjct: 277 RSELQSQLPQPSVRELVRLLHGLAIVFALGGYVVLREEVAEELEEVGAVQHGADAEVAAA 98
Query: 875 RVG 867
RVG
Sbjct: 97 RVG 89
Score = 49.2 bits (101), Expect = 6e-005
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -2 / -2
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL NLY + GL S HL T Y GK R+ ++ RC Q *RP
Sbjct: 276 GVNSNPSSLSLRFENLYGFSMGLPSSSHLAVTWYCGKRSPRSWRKWARCSTAPMQR*RPR 97
Query: 874 AWG 866
A G
Sbjct: 96 ASG 88
Score = 36.8 bits (74), Expect(3) = 2e-022
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3 / +1
Query: 792 TYVNAAQAYVHVRDVAEAHVRVYEAP 869
T +A AY VRDVA AHV VYE P
Sbjct: 13 TPTHAVAAYTDVRDVARAHVLVYEHP 90
Score = 27.6 bits (54), Expect(2) = 1e-012
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2 / -3
Query: 868 GASYTRTCASATSLTCTYACAAFT*VVA 785
G S TRTCA ATS T A A+ V +
Sbjct: 89 GCS*TRTCARATSRTSV*AATAWVGVTS 6
Score = 27.2 bits (53), Expect(3) = 2e-022
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 1061 QCLYETVTSLQEKGML 1108
+ LYETVT LQ+KG L
Sbjct: 284 ESLYETVTCLQKKGHL 331
>gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. vulgare cDNA clone HB24O01
5-PRIME, mRNA sequence
Length = 478
Score = 68.9 bits (144), Expect(3) = 2e-022
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 12 VCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 119
Score = 49.6 bits (102), Expect(2) = 2e-008
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F GS TV RTV*P RR LTSQEAM P APVT T+
Sbjct: 121 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTL 8
Score = 40.5 bits (82), Expect(3) = 2e-022
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 264 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGKPRTPDVVVDETW 434
Score = 39.6 bits (80), Expect(2) = 1e-006
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +2
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 35 LHRLLARQAPPPPGLHRPRH 94
Score = 38.2 bits (77), Expect(2) = 8e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -3
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 119 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 12
Score = 35.9 bits (72), Expect(2) = 1e-006
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3 / +3
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWY 626
+V +S Y R P VD+T +S E C+ Q WY
Sbjct: 357 IVTSSMAAVAYNGKPRTPDVVVDETWFSSAEVCEKNQQWY 476
Score = 34.5 bits (69), Expect(3) = 2e-022
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASP 416
K HL+AL+G + A +GCD VFH ASP
Sbjct: 120 KTLHLQALEGAKERLHLFKASLLEEGTXDAAIAGCDCVFHTASP 251
Score = 29.5 bits (58), Expect(2) = 2e-008
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 250 GEAVWKTQSQPAMAASKV 197
Score = 28.6 bits (56), Expect(2) = 8e-005
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1 / -3
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G + + QQ E+ + + G+ +G QV
Sbjct: 239 VEDTVAAGDGSIXSAFFQQACFEQVQPLLGSFQGLQV 129
>gb|CA002692.1|CA002692 HS08E02r HS Hordeum vulgare subsp. vulgare cDNA clone HS08E02
5-PRIME, mRNA sequence
Length = 453
Score = 79.9 bits (168), Expect(3) = 2e-022
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 70 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 201
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 203 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 75
Score = 39.6 bits (80), Expect = 0.045
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 117 LHRLLARQAPPPPGLHRPRH 176
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 201 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 94
Score = 35.4 bits (71), Expect(3) = 2e-022
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D +++PA+ GT V+ + A +KRV+ TSS
Sbjct: 346 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSS 453
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 321 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 211
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 332 GEAVWKTQSQPAMAASKV 279
Score = 28.6 bits (56), Expect(3) = 2e-022
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 292 AIAGCDCVFHTASP 333
>gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20a13 3', mRNA sequence
Length = 767
Score = 68.0 bits (142), Expect(2) = 3e-022
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 474 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 295
Query: 924 CRVLAKLFPEYPVP 965
+L L+P Y P
Sbjct: 294 INILKTLYPTYTYP 253
Score = 57.9 bits (120), Expect(2) = 3e-022
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +3 / -3
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
VKRVV SS V+ NP K + WSD + C+ ++WY +KT AE+ A+ A K
Sbjct: 720 VKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAK 541
Query: 678 RG 683
G
Sbjct: 540 TG 535
Score = 52.8 bits (109), Expect(2) = 2e-009
Identities = 34/83 (40%), Positives = 40/83 (48%)
Frame = -2 / +2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S+ +G Y G + R S QM RP A G SY R ASATS T T F
Sbjct: 239 SVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLF 418
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
+ V P+RY +LAFTVGC
Sbjct: 419 STVSCSPLRYLRRILLLAFTVGC 487
Score = 29.9 bits (59), Expect(2) = 2e-009
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = -2 / +2
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFT 497
SA VL +YQ FL S S Q S L + G + T ED TTR T
Sbjct: 569 SARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLT 721
>gb|BM442891.2|BM442891 EBro02_SQ001_L17_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_L17 5', mRNA sequence
Length = 438
Score = 79.4 bits (167), Expect(2) = 3e-022
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3 / +3
Query: 960 VPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
VPTKCKD+VNPPV GYKFTNQRLKDLGM+FVPV
Sbjct: 3 VPTKCKDEVNPPVKGYKFTNQRLKDLGMEFVPV 101
Score = 70.3 bits (147), Expect(2) = 9e-017
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = -2 / -3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGT 959
TGT SIPRSLSLWLVNLYP TGG T SLHLVGT
Sbjct: 100 TGTNSIPRSLSLWLVNLYPFTGGFTSSLHLVGT 2
Score = 64.8 bits (135), Expect(2) = 4e-011
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1 / -2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGY 960
RHE+HPQ+LEPLV ELV +HR V+LVLALGGY
Sbjct: 98 RHELHPQVLEPLVSELVPFHRWVHLVLALGGY 3
Score = 62.9 bits (131), Expect(2) = 2e-013
Identities = 25/33 (75%), Positives = 28/33 (84%)
Frame = +2 / +2
Query: 959 RTHQVQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
RTHQVQG G P+G R+QVH PEAQG GDG+RAG
Sbjct: 2 RTHQVQGRGEPTGERVQVH*PEAQGPGDGVRAG 100
Score = 46.4 bits (95), Expect(2) = 3e-022
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +2 / +3
Query: 1058 LQCLYETVTSLQEKGMLPVLPTKQD 1132
LQ +YETV SLQEKGMLPVLP D
Sbjct: 102 LQSIYETVKSLQEKGMLPVLPPSDD 176
Score = 40.0 bits (81), Expect = 0.033
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 1006 TSSPTRGSRIWGWTSCR 1056
TSS TRGSR WGW+SCR
Sbjct: 49 TSSLTRGSRTWGWSSCR 99
Score = 38.6 bits (78), Expect(2) = 2e-005
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -3 / -1
Query: 1020 GW*TCILPPEG*PGPCTWWV 961
G *TC L P G P PCTWWV
Sbjct: 63 G**TCTLSPVGSPRPCTWWV 4
Score = 37.3 bits (75), Expect(2) = 9e-017
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -3 / -3
Query: 1119 GSTGSMPFSWRLVTVS 1072
GSTGS+PFSWRL TVS
Sbjct: 163 GSTGSIPFSWRLFTVS 116
Score = 33.1 bits (66), Expect(2) = 2e-013
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1 / +2
Query: 1069 LRDGHQPPGERHAARASDKTR 1131
+RDG +PPGER AA A+ K R
Sbjct: 113 IRDGEEPPGERDAAGATTK*R 175
Score = 30.4 bits (60), Expect(2) = 2e-005
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2 / -2
Query: 1114 HGQHAFLLEAGDRLVEALQTGTKSIPRSLSLWLVNLYP 1001
H QH FLLEA RLV LQ + P+ L + L P
Sbjct: 158 HRQHPFLLEALHRLVYTLQHRHELHPQVLEPLVSELVP 45
Score = 23.5 bits (45), Expect(2) = 4e-011
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 1115 ARAACLSPGGW*PSR 1071
A AA LSPGG PSR
Sbjct: 159 APAASLSPGGSSPSR 115
>gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002H13f, mRNA sequence
Length = 942
Score = 63.4 bits (132), Expect(3) = 4e-022
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA D GV+RVV TSS+ V +P + +D+ CW+D++YC W +KT+AE+
Sbjct: 367 AAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWDPASKTLAEKA 546
Query: 657 AWEVARKRG 683
+ A + G
Sbjct: 547 T*KFAEENG 573
Score = 48.3 bits (99), Expect(3) = 4e-022
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3 / +1
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+G TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 34 KGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 147
Score = 40.5 bits (82), Expect(2) = 3e-006
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -2
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
S+G T T *P +RRR T E M P APVT TV P
Sbjct: 146 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSP 36
Score = 31.8 bits (63), Expect(2) = 5.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 304 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 411
Score = 31.3 bits (62), Expect(2) = 3e-006
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA WKTP QP A++
Sbjct: 293 VQGEARWKTPEQPRAAAS 240
Score = 31.3 bits (62), Expect(3) = 4e-022
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 235 AMLAAARGCSGVFHLASPCTVD 300
Score = 21.7 bits (41), Expect(2) = 5.4
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H L R PP L PR +P
Sbjct: 66 RLHRLRDRAPPPRPRLLRPRRRPQP 140
>gb|BU985911.1|BU985911 HF08P24r HF Hordeum vulgare subsp. vulgare cDNA clone HF08P24
5-PRIME, mRNA sequence
Length = 401
Score = 71.2 bits (149), Expect(2) = 4e-022
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = +3 / +2
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GCDGVFH ASPV
Sbjct: 134 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLNYDSIASAVAGCDGVFHVASPV 307
Score = 54.2 bits (112), Expect(2) = 4e-022
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGY 248
+TVCVTGAGGFIASWLVK LL KG+
Sbjct: 59 KTVCVTGAGGFIASWLVKLLLSKGH 133
Score = 42.3 bits (86), Expect(2) = 3e-007
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RR LTS EAM PPAPVT TV
Sbjct: 129 PLERRSLTSHEAMKPPAPVTHTV 61
Score = 32.7 bits (65), Expect(2) = 3e-007
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 306 TGLATWKTPSQPATADAML 250
Score = 31.8 bits (63), Expect(2) = 0.002
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1 / -2
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEE 333
DR +ED +TA A+ VQQVGAE+
Sbjct: 307 DRASNMEDPITASNR*RNAVVVQQVGAEQ 221
Score = 29.9 bits (59), Expect(2) = 0.002
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1 / -2
Query: 248 VALLQEALDEPGGNEPSSSGHAN 180
V+L +E LDEP G+E S + HA+
Sbjct: 133 VSLGEEELDEPRGDEASCASHAH 65
>gb|CA009680.1|CA009680 HU14N01r HU Hordeum vulgare subsp. vulgare cDNA clone HU14N01
5-PRIME, mRNA sequence
Length = 613
Score = 67.5 bits (141), Expect(3) = 5e-022
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +3 / +2
Query: 540 MNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
M+P R P +D+ CWSD ++CKNT N YC AK +AE A E A KRG
Sbjct: 11 MDPNRSPDAVLDEACWSDYDFCKNTGNLYCCAKMMAEITATEEAAKRG 154
Score = 44.1 bits (90), Expect(3) = 6e-010
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = -1 / -1
Query: 965 GYGVLREELGEDAAEVAAVQGALGADVAAVRVG 867
GY VLREE+ E+ EV AVQ A+VAA RVG
Sbjct: 613 GYVVLREEVAEELEEVGAVQHGADAEVAAARVG 515
Score = 41.8 bits (85), Expect(3) = 5e-022
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3 / +2
Query: 867 PHAHGRYICAESTLHRGDLCRVLAKLFPEYPV 962
P A GRY+C + LHR ++L LFP+Y V
Sbjct: 515 PDARGRYLCIGAVLHRAHFLQLLGDLFPQYHV 610
Score = 38.6 bits (78), Expect = 0.085
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2 / +1
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
P P P++ R LLER R+LQ+H + VLLR+D
Sbjct: 16 PQPQPRRRARRGLLERLRLLQKHRQPVLLRED 111
Score = 38.2 bits (77), Expect(3) = 5e-022
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +3 / +1
Query: 801 NAAQAYVHVRDVAEAHVRVYEAP 869
NA AY VRDVA AHV VYE P
Sbjct: 448 NAVAAYTDVRDVARAHVLVYEHP 516
Score = 35.0 bits (70), Expect(3) = 6e-010
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 658 APCSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*G 545
A SA + A QY+ VFLQ S SLQQ SS+ G R G
Sbjct: 129 AVISAIIFAQQYRLPVFLQKS*SLQQASSSTASGLRLG 16
Score = 26.7 bits (52), Expect(3) = 6e-010
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2 / -3
Query: 868 GASYTRTCASATSLTCTYACAA 803
G S TRTCA ATS T A A
Sbjct: 515 GCS*TRTCARATSRTSV*AATA 450
>gb|BE214863.2|BE214863 HV_CEb0004O14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0004O14f, mRNA sequence
Length = 636
Score = 105 bits (224), Expect = 6e-022
Identities = 45/83 (54%), Positives = 48/83 (57%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXP 359
VCVTG GGFIASWLVK LL +GY V TVR+P D KN HL LDG
Sbjct: 43 VCVTGGGGFIASWLVKLLLSRGYAVHATVRDPCDQKNAHLMQLDGAAESLSLFKADVLDR 222
Query: 360 QSLAEAFSGCDGVFHAASPVTDD 428
+LA GC GVFH ASPV D
Sbjct: 223 AALAXVVXGCQGVFHVASPVPAD 291
Score = 56.1 bits (116), Expect = 5e-007
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
+RGG +EDA+ + G+ V+ VG E+ + + V+ Q+ VL + V D D VA
Sbjct: 282 NRGGDMEDALATXDDXGERGAVEHVGLEQAQALRRPVQLHQMRVLLVTWVXDGGVDGVAP 103
Query: 239 LQEALDEPGGNEPSSSGHAN 180
+E LDEP +E +++GHA+
Sbjct: 102 GEEQLDEPRCDESAATGHAH 43
Score = 47.3 bits (97), Expect(2) = 7e-008
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+FF S G TV T *P R LTS +AMNPP PVT T
Sbjct: 155 AFFWSHGSRTVAWTA*PRERSSLTSHDAMNPPPPVTHT 42
Score = 33.6 bits (67), Expect = 2.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H ++ARQA P GL PRH P
Sbjct: 63 RIHRIVARQAAPLPGLRRPRHRPXP 137
Score = 29.9 bits (59), Expect(2) = 7e-008
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASA 368
TGEA WKTP QP A
Sbjct: 281 TGEATWKTPWQPXTTXA 231
>gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0023N15f, mRNA sequence
Length = 678
Score = 72.5 bits (152), Expect(3) = 8e-022
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWL+K +L + YTVR TVR+ DPK
Sbjct: 89 MSSGMGKVVCVTGASGYIASWLIKGVLGRXYTVRATVRDTDDPK 220
Score = 44.6 bits (91), Expect(2) = 6e-007
Identities = 24/43 (55%), Positives = 25/43 (58%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS+ TV RTV* L SQEAM P APVT T P PE
Sbjct: 222 FLGSSVSRTVARTV*XRPSTPLMSQEAM*PEAPVTHTTFPIPE 94
Score = 40.9 bits (83), Expect(3) = 8e-022
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
V D +++PA+ GT V+ + A +KRV+ TSS+ V N V D W
Sbjct: 365 VKDPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYNGRPKTPDVVIDETW 535
Score = 40.5 bits (82), Expect(2) = 1e-005
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3 / +2
Query: 507 VVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
+V +S Y + P +D+T +S C+ +WY ++T+AE+G EV ++
Sbjct: 458 IVTSSMAAVAYNGRPKTPDVVIDETWFSSGRVCEKR*HWYVLSQTLAEEGCVEVPKR 628
Score = 35.9 bits (72), Expect(2) = 5e-004
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -1 / -3
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD AD VA Q LDEPGG+ +G A+
Sbjct: 205 VPDGGADGVAAPQHPLDEPGGDVARGAGDAH 113
Score = 32.2 bits (64), Expect(2) = 1e-005
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1 / +3
Query: 190 PELEGSLPPGSSSASWRRATQSAARSGT 273
P + PPGSS W AT SA SGT
Sbjct: 123 PAPRATSPPGSSRGCWGAATPSAPPSGT 206
Score = 29.5 bits (58), Expect(2) = 6e-007
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 351 GEAVWKTQSQPAMAASKV 298
Score = 28.6 bits (56), Expect(3) = 8e-022
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 311 AIAGCDCVFHTASP 352
Score = 28.1 bits (55), Expect(2) = 5e-004
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1 / -3
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G +G QV
Sbjct: 340 VEDTVAAGDGSIESAFFQQACFEQVQPLLGYFQGLQV 230
>gb|AL503005.1|AL503005 AL503005 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09G19u 3', mRNA sequence
Length = 640
Score = 70.7 bits (148), Expect(3) = 1e-021
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3 / -1
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+CKD+VNPPV GYKFTNQRLKDLGM+FVPV
Sbjct: 451 RCKDEVNPPVKGYKFTNQRLKDLGMEFVPV 362
Score = 63.4 bits (132), Expect(3) = 7e-017
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = -2 / +3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
TGT SIPRSLSLWLVNLYP TGG T SLHL
Sbjct: 363 TGTNSIPRSLSLWLVNLYPFTGGFTSSLHL 452
Score = 54.2 bits (112), Expect(3) = 2e-008
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1 / +2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLA 972
RHE+HPQ+LEPLV ELV +HR V+LVLA
Sbjct: 365 RHELHPQVLEPLVSELVPFHRWVHLVLA 448
Score = 52.4 bits (108), Expect(2) = 3e-010
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2 / -3
Query: 971 VQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VQG G P+G R+QVH PEAQG GDG+RAG
Sbjct: 449 VQGRGEPTGERVQVH*PEAQGPGDGVRAG 363
Score = 46.4 bits (95), Expect(3) = 1e-021
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +2 / -1
Query: 1058 LQCLYETVTSLQEKGMLPVLPTKQD 1132
LQ +YETV SLQEKGMLPVLP D
Sbjct: 361 LQSIYETVKSLQEKGMLPVLPPSDD 287
Score = 40.0 bits (81), Expect = 0.033
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / -2
Query: 1006 TSSPTRGSRIWGWTSCR 1056
TSS TRGSR WGW+SCR
Sbjct: 414 TSSLTRGSRTWGWSSCR 364
Score = 37.3 bits (75), Expect(3) = 7e-017
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -3 / +3
Query: 1119 GSTGSMPFSWRLVTVS 1072
GSTGS+PFSWRL TVS
Sbjct: 300 GSTGSIPFSWRLFTVS 347
Score = 33.1 bits (66), Expect(2) = 3e-010
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1 / -3
Query: 1069 LRDGHQPPGERHAARASDKTR 1131
+RDG +PPGER AA A+ K R
Sbjct: 350 IRDGEEPPGERDAAGATTK*R 288
Score = 30.4 bits (60), Expect(3) = 0.015
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2 / +2
Query: 1114 HGQHAFLLEAGDRLVEALQTGTKSIPRSLSLWLVNLYP 1001
H QH FLLEA RLV LQ + P+ L + L P
Sbjct: 305 HRQHPFLLEALHRLVYTLQHRHELHPQVLEPLVSELVP 418
Score = 29.5 bits (58), Expect(3) = 7e-017
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / +1
Query: 964 GTGYSGKSLARTRQRSPR 911
GTGYSG+ LA R+PR
Sbjct: 580 GTGYSGEELAEDAARAPR 633
Score = 27.6 bits (54), Expect(3) = 0.015
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3 / +1
Query: 1020 GW*TCILPPEG*PGPCTW 967
G *TC L P G P PCT+
Sbjct: 400 G**TCTLSPVGSPRPCTY 453
Score = 24.0 bits (46), Expect(3) = 1e-021
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3 / -3
Query: 912 RGDLCRVLAKLFPEYPVPTKCK 977
RG L A PEYPVP + +
Sbjct: 632 RGALAASSASSSPEYPVPPQVR 567
Score = 23.5 bits (45), Expect(3) = 2e-008
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / +1
Query: 1115 ARAACLSPGGW*PSR 1071
A AA LSPGG PSR
Sbjct: 304 APAASLSPGGSSPSR 348
Score = 23.1 bits (44), Expect(3) = 2e-008
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / +1
Query: 968 GGYGVLREELGEDAA 924
GG G EEL EDAA
Sbjct: 577 GGTGYSGEELAEDAA 621
Score = 21.7 bits (41), Expect(3) = 0.015
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -1 / +3
Query: 971 LGGYGVLR 948
LGGYG+LR
Sbjct: 573 LGGYGILR 596
>gb|BQ465481.1|BQ465481 HU03M08r HU Hordeum vulgare subsp. vulgare cDNA clone HU03M08
5-PRIME, mRNA sequence
Length = 415
Score = 103 bits (220), Expect = 2e-021
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +3 / +3
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
++ A+ GTR V+ AA DAGV+RVVFTSS G V+M+P R P +D+ CWSD ++CKNT
Sbjct: 198 LVPVAVEGTRNVIRAAADAGVRRVVFTSSYGAVHMDPNRSPDAVLDEACWSDYDFCKNTG 377
Query: 618 NWYCYAKTVAE 650
N YC AK +AE
Sbjct: 378 NLYCCAKMMAE 410
Score = 71.6 bits (150), Expect(2) = 3e-021
Identities = 38/64 (59%), Positives = 43/64 (67%)
Frame = -2 / -1
Query: 649 SATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT 470
SA + A QY+ VFLQ S SLQQ SS+ G R G M T P +DVNTTR TPAS+AA IT
Sbjct: 409 SAIIFAQQYRLPVFLQKS*SLQQASSSTASGLRLGSMCTAP*DDVNTTRRTPASAAALIT 230
Query: 469 *RVP 458
VP
Sbjct: 229 FLVP 218
Score = 68.9 bits (144), Expect(2) = 9e-017
Identities = 32/79 (40%), Positives = 40/79 (50%)
Frame = +3 / +3
Query: 252 VRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPVTDDP 431
VRGT R+P D KN HL AL+G L AF GC GVFH A PV++DP
Sbjct: 15 VRGTARDPADRKNAHLLALEGAEERLTMCRADVLDYDGLGAAFHGCHGVFHVAWPVSNDP 194
Query: 432 EMMIEPAIRGTRYVMAAAD 488
+++ + AAAD
Sbjct: 195 DLVPVAVEGTRNVIRAAAD 251
Score = 51.0 bits (105), Expect(2) = 3e-021
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = -1 / -3
Query: 440 HHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDR 261
H + V+GDR G V+DAV A EG +A+ V+ VGA E + ++G QV VL + +
Sbjct: 203 HEVGVVGDRPGDVKDAVAAVEGGAEAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGG 24
Query: 260 AADCVA 243
++D +
Sbjct: 23 SSDAAS 6
Score = 38.6 bits (78), Expect(2) = 9e-017
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2 / +2
Query: 545 PLP*PQQACGRHLLERPRVLQEHPELVLLRQD 640
P P P++ R LLER R+LQ+H + VLLR+D
Sbjct: 305 PQPQPRRRARRGLLERLRLLQKHRQPVLLRED 400
>gb|AL502063.1|AL502063 AL502063 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06F22u 3', mRNA sequence
Length = 690
Score = 98.7 bits (209), Expect(2) = 7e-021
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3 / -2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 548 NTSAEAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 369
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ +++PE+PVP KC D
Sbjct: 368 VKIIHEMYPEFPVPDKCAD 312
Score = 54.2 bits (112), Expect = 2e-006
Identities = 34/79 (43%), Positives = 36/79 (45%)
Frame = -2 / +1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 313 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 492
Query: 799 T*VVADPVRYFITWSVLAF 743
V DP F S L F
Sbjct: 493 AYVEDDPFINFNIASALVF 549
Score = 22.6 bits (43), Expect(2) = 7e-021
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 227 LKETIESLKEKGFL 186
>gb|BU976322.1|BU976322 HA03I06u HA Hordeum vulgare subsp. vulgare cDNA clone HA03I06
3-PRIME, mRNA sequence
Length = 607
Score = 98.7 bits (209), Expect(2) = 7e-021
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 587 NTSAEAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 408
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ +++PE+PVP KC D
Sbjct: 407 VKIIHEMYPEFPVPDKCAD 351
Score = 63.4 bits (132), Expect = 3e-009
Identities = 37/83 (44%), Positives = 40/83 (48%)
Frame = -2 / +1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 352 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 531
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP F S L F+VGC
Sbjct: 532 AYVEDDPFINFNIASALVFSVGC 600
Score = 22.6 bits (43), Expect(2) = 7e-021
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 266 LKETIESLKEKGFL 225
>gb|CA000510.1|CA000510 HS08E02u HS Hordeum vulgare subsp. vulgare cDNA clone HS08E02
3-PRIME, mRNA sequence
Length = 547
Score = 98.7 bits (209), Expect(2) = 7e-021
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3 / -2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 528 NTSAEAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 349
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ +++PE+PVP KC D
Sbjct: 348 VKIIHEMYPEFPVPDKCAD 292
Score = 63.4 bits (132), Expect = 3e-009
Identities = 37/83 (44%), Positives = 40/83 (48%)
Frame = -2 / +2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 293 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 472
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP F S L F+VGC
Sbjct: 473 AYVEDDPFINFNIASALVFSVGC 541
Score = 22.6 bits (43), Expect(2) = 7e-021
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 207 LKETIESLKEKGFL 166
>gb|AJ463296.1|AJ463296 AJ463296 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200081G02F1, mRNA sequence
Length = 420
Score = 98.7 bits (209), Expect(2) = 7e-021
Identities = 34/79 (43%), Positives = 54/79 (68%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 19 NTSAEAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 198
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ +++PE+PVP KC D
Sbjct: 199 VKIIHEMYPEFPVPDKCAD 255
Score = 63.4 bits (132), Expect = 3e-009
Identities = 37/83 (44%), Positives = 40/83 (48%)
Frame = -2 / -2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 254 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 75
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP F S L F+VGC
Sbjct: 74 AYVEDDPFINFNIASALVFSVGC 6
Score = 22.6 bits (43), Expect(2) = 7e-021
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 340 LKETIESLKEKGFL 381
>gb|BF064595.2|BF064595 HV_CEb0016A19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016A19f, mRNA sequence
Length = 591
Score = 101 bits (215), Expect = 1e-020
Identities = 45/86 (52%), Positives = 53/86 (61%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXX 344
G+G TVCVTGAGG+I SWLVK LL +GY+VRGTVR + K HLR+L+
Sbjct: 88 GKGETVCVTGAGGYIVSWLVKLLLCRGYSVRGTVRYLGEKKTVHLRSLENASENLKLIKA 267
Query: 345 XXXXPQSLAEAFSGCDGVFHAASPVT 422
+A A GC GVFH ASPVT
Sbjct: 268 DLLDYDPMAAAI*GCHGVFHVASPVT 345
Score = 52.8 bits (109), Expect(2) = 9e-010
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 265 TVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
TVPRT *P RR TS E M PPAPVT TV P P
Sbjct: 188 TVPRTE*PRQRRSFTSHETMYPPAPVTHTVSPFP 87
Score = 46.0 bits (94), Expect = 5e-004
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = -1 / -1
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
+R G +E+++ + G + +QQ+G ++ E + + PQ+ L++ +V D A D V
Sbjct: 342 NRAGNMENSMASLYGSRHRVIIQQIGLDKLEILRCVL*RPQMNGLFLAKVADGATDGVTS 163
Query: 239 LQEALDEPGGNEPSSSGHAN 180
+E L EP + P+ +G A+
Sbjct: 162 AEEELHEPRDDVPAGAGDAH 103
Score = 30.9 bits (61), Expect(2) = 9e-010
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2 / -2
Query: 460 PRXXXXXXXXXXSVTGEAAWKTPSQPEKASA 368
PR +VTG A WKTP P A+A
Sbjct: 383 PRTSTYGSVTSPAVTGLATWKTPWHPYMAAA 291
>gb|BE455566.2|BE455566 HVSMEg0017N13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N13f, mRNA sequence
Length = 584
Score = 68.4 bits (143), Expect(2) = 1e-020
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +3 / +2
Query: 816 YVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPP 995
YVH+ DVA H+ VYE A GRYIC + L +L +LAK FP +P+P +
Sbjct: 377 YVHIDDVASCHILVYETADAKGRYICNSAVLGSDELVALLAKRFPSFPIPKSLPNIYGEQ 556
Query: 996 VVGY 1007
GY
Sbjct: 557 TYGY 568
Score = 55.1 bits (114), Expect(2) = 1e-020
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
P+ +D+T WS +E+C++ Q WY AK +AE+ AWE A++
Sbjct: 116 PNVLLDETSWSSVEFCESIQIWYAVAKILAEKSAWEFAKE 235
Score = 37.7 bits (76), Expect = 0.16
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +2 / +1
Query: 557 PQQACGRHLLERPRVLQEHPELVLLRQD 640
PQ+A G +++E RVL++HP++V RQD
Sbjct: 115 PQRAAG*NIMELRRVLRKHPDMVRCRQD 198
>gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0013N24f, mRNA sequence
Length = 896
Score = 67.0 bits (140), Expect(3) = 1e-020
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
VCVTGA GF+ASWLVKRLLE GY V GTVR+P + K
Sbjct: 36 VCVTGASGFVASWLVKRLLESGYHVLGTVRDPGNQK 143
Score = 51.9 bits (107), Expect(2) = 3e-009
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
+FF G LTVPRT P SR RLTSQEA P APVT T+
Sbjct: 148 TFF*LPGSLTVPRT*YPDSRSRLTSQEATKPEAPVTHTL 32
Score = 46.9 bits (96), Expect(3) = 1e-020
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARK 677
P+ +D+T WS +E+C++ Q Y AK +AE+ WE A++
Sbjct: 435 PNVLLDETSWSSVEFCESIQILYACAKILAEKSTWEFAKE 554
Score = 40.0 bits (81), Expect = 0.033
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2 / +2
Query: 557 PQQACGRHLLERPRVLQEHPELVLLRQD 640
PQ+A G +++E RVL++HP++V LRQD
Sbjct: 434 PQRAAG*NIMELRRVLRKHPDIVRLRQD 517
Score = 29.9 bits (59), Expect(2) = 3e-009
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G+A WKTPSQ AS++L
Sbjct: 274 GDAVWKTPSQAITASSKL 221
Score = 29.9 bits (59), Expect(3) = 1e-020
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPV 419
S +A C+GVFH ASP+
Sbjct: 222 SFDDAVMACEGVFHTASPI 278
>gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF18P19
5-PRIME, mRNA sequence
Length = 529
Score = 65.2 bits (136), Expect(2) = 3e-020
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3 / +2
Query: 504 RVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+V+ SS V NP K D++CWSD ++C+ ++WY AK VAEQ ++E + K G
Sbjct: 2 KVIVLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNG 181
Score = 54.2 bits (112), Expect(2) = 3e-020
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S+ ++ G N V VRDVA+A + VYE ++GRYIC + + DL
Sbjct: 242 NTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDL 421
Query: 924 CRVLAKLFPEY 956
+L K+ P+Y
Sbjct: 422 VDLLKKMHPQY 454
Score = 38.2 bits (77), Expect(2) = 0.019
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = -2 / -2
Query: 652 CSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTT 506
CSAT+LA +YQ F Q S S QQ+SS L + G T ++D T
Sbjct: 150 CSATILATEYQSSFFWQKSLSDQQLSSLSLS*GQFGLKSTAAVDDKTIT 4
Score = 23.1 bits (44), Expect(2) = 0.019
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2 / -2
Query: 904 VLSAQM*RPCAWGASYTRTCASATSLTCT 818
+ QM P SYT + ASATS T T
Sbjct: 402 LFGVQMYLPYDSAFSYTSSKASATSRTST 316
>gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF19P19
5-PRIME, mRNA sequence
Length = 518
Score = 65.2 bits (136), Expect(2) = 3e-020
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = +3 / +2
Query: 504 RVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
+V+ SS V NP K D++CWSD ++C+ ++WY AK VAEQ ++E + K G
Sbjct: 2 KVIVLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNG 181
Score = 54.2 bits (112), Expect(2) = 3e-020
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S+ ++ G N V VRDVA+A + VYE ++GRYIC + + DL
Sbjct: 242 NTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDL 421
Query: 924 CRVLAKLFPEY 956
+L K+ P+Y
Sbjct: 422 VDLLKKMHPQY 454
Score = 38.2 bits (77), Expect(2) = 0.019
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = -2 / -3
Query: 652 CSATVLA*QYQFWVFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTT 506
CSAT+LA +YQ F Q S S QQ+SS L + G T ++D T
Sbjct: 150 CSATILATEYQSSFFWQKSLSDQQLSSLSLS*GQFGLKSTAAVDDKTIT 4
Score = 23.1 bits (44), Expect(2) = 0.019
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2 / -3
Query: 904 VLSAQM*RPCAWGASYTRTCASATSLTCT 818
+ QM P SYT + ASATS T T
Sbjct: 402 LFGVQMYLPYDSAFSYTSSKASATSRTST 316
>gb|BI957985.1|BI957985 HVSMEn0012J23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012J23f, mRNA sequence
Length = 464
Score = 99.6 bits (211), Expect = 4e-020
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
S+G G+TVCVTGAGG+I SWLVK LL+KGY VRGTVRNP D KN HLRAL G
Sbjct: 67 STGHGQTVCVTGAGGYIGSWLVKLLLDKGYAVRGTVRNPDDAKNAHLRALTG 222
Score = 70.3 bits (147), Expect = 3e-011
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = -2 / -1
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPED 158
+FF S+GFLTVPRT P SRR LTS + M PPAPVT TV P P D
Sbjct: 200 AFFASSGFLTVPRTAYPLSRRSLTSHDPM*PPAPVTHTVCPWPVD 66
Score = 43.2 bits (88), Expect = 0.004
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = -1 / -3
Query: 356 VQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
V V + + + A + PQV VL + VPD A+ V L++E LDEP + + +GHA+
Sbjct: 264 VYHVSLVKHQPLHRAGESPQVRVLRVIGVPDGASHGVPLVEEELDEPRPDVAAGAGHAH 88
Score = 38.6 bits (78), Expect = 0.085
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H ++ARQAPP +G+ RH QEP
Sbjct: 108 RLHRVVARQAPPRQGVRRARHRQEP 182
>gb|CV057862.1|CV057862 BNEL31f4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL31f4 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 634
Score = 74.8 bits (157), Expect(3) = 8e-020
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA D GV+RVV TSS+ V +P + +D+ CW+D++YC WY +KT+ E+
Sbjct: 388 AAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLTEKA 567
Query: 657 AWEVARKRG 683
AW+ A + G
Sbjct: 568 AWKFAEENG 594
Score = 31.8 bits (63), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +1
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 325 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 432
Score = 31.3 bits (62), Expect(3) = 8e-020
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 256 AMLAAARGCSGVFHLASPCTVD 321
Score = 29.0 bits (57), Expect(3) = 8e-020
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +3 / +3
Query: 177 TVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
TV VT A GFI S LL +GY+V P
Sbjct: 63 TVLVTRASGFIRSGTRAPLLARGYSVHARRPQP 161
>gb|BM372782.2|BM372782 EBpi05_SQ003_O16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_O16 5', mRNA sequence
Length = 623
Score = 94.5 bits (200), Expect(2) = 1e-019
Identities = 33/79 (41%), Positives = 52/79 (65%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N + ++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 31 NTIAEAILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 210
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+ + +++PE+PVP KC D
Sbjct: 211 VKTIHEMYPEFPVPDKCAD 267
Score = 58.3 bits (121), Expect = 1e-007
Identities = 34/83 (40%), Positives = 38/83 (45%)
Frame = -2 / -1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATS T T+
Sbjct: 266 SAHLSGTGNSGYISCMVLTRSEW*MTLSTMQYLPFAEGSSYARICARATSFTFTHPKQKL 87
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP F S + F+VGC
Sbjct: 86 AYVEDDPFINFNIASAIVFSVGC 18
Score = 22.6 bits (43), Expect(2) = 1e-019
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +1
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 352 LKETIESLKEKGFL 393
>gb|AL502301.1|AL502301 AL502301 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07C05u 3', mRNA sequence
Length = 501
Score = 70.7 bits (148), Expect(2) = 1e-019
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3 / -3
Query: 969 KCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
+CKD+VNPPV GYKFTNQRLKDLGM+FVPV
Sbjct: 448 RCKDEVNPPVKGYKFTNQRLKDLGMEFVPV 359
Score = 63.4 bits (132), Expect(2) = 9e-015
Identities = 26/30 (86%), Positives = 26/30 (86%)
Frame = -2 / +3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHL 968
TGT SIPRSLSLWLVNLYP TGG T SLHL
Sbjct: 360 TGTNSIPRSLSLWLVNLYPFTGGFTSSLHL 449
Score = 54.2 bits (112), Expect(2) = 5e-008
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = -1 / +2
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLA 972
RHE+HPQ+LEPLV ELV +HR V+LVLA
Sbjct: 362 RHELHPQVLEPLVSELVPFHRWVHLVLA 445
Score = 52.4 bits (108), Expect(2) = 3e-010
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +2 / -2
Query: 971 VQGPG*PSGGRIQVHQPEAQGSGDGLRAG 1057
VQG G P+G R+QVH PEAQG GDG+RAG
Sbjct: 446 VQGRGEPTGERVQVH*PEAQGPGDGVRAG 360
Score = 46.4 bits (95), Expect(2) = 1e-019
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +2 / -3
Query: 1058 LQCLYETVTSLQEKGMLPVLPTKQD 1132
LQ +YETV SLQEKGMLPVLP D
Sbjct: 358 LQSIYETVKSLQEKGMLPVLPPSDD 284
Score = 40.0 bits (81), Expect = 0.033
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 1006 TSSPTRGSRIWGWTSCR 1056
TSS TRGSR WGW+SCR
Sbjct: 411 TSSLTRGSRTWGWSSCR 361
Score = 37.3 bits (75), Expect(2) = 9e-015
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -3 / +3
Query: 1119 GSTGSMPFSWRLVTVS 1072
GSTGS+PFSWRL TVS
Sbjct: 297 GSTGSIPFSWRLFTVS 344
Score = 33.1 bits (66), Expect(2) = 3e-010
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1 / -2
Query: 1069 LRDGHQPPGERHAARASDKTR 1131
+RDG +PPGER AA A+ K R
Sbjct: 347 IRDGEEPPGERDAAGATTK*R 285
Score = 30.4 bits (60), Expect(2) = 0.025
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2 / +2
Query: 1114 HGQHAFLLEAGDRLVEALQTGTKSIPRSLSLWLVNLYP 1001
H QH FLLEA RLV LQ + P+ L + L P
Sbjct: 302 HRQHPFLLEALHRLVYTLQHRHELHPQVLEPLVSELVP 415
Score = 27.6 bits (54), Expect(2) = 0.025
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3 / +1
Query: 1020 GW*TCILPPEG*PGPCTW 967
G *TC L P G P PCT+
Sbjct: 397 G**TCTLSPVGSPRPCTY 450
Score = 23.5 bits (45), Expect(2) = 5e-008
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / +1
Query: 1115 ARAACLSPGGW*PSR 1071
A AA LSPGG PSR
Sbjct: 301 APAASLSPGGSSPSR 345
>gb|CA011608.1|CA011608 HT03A12r HT Hordeum vulgare subsp. vulgare cDNA clone HT03A12
5-PRIME, mRNA sequence
Length = 371
Score = 69.3 bits (145), Expect(2) = 1e-019
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
YTVRGTVR+P + KN HL+AL+G S+A A +GC+GVFH ASPV
Sbjct: 97 YTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPV 270
Score = 47.8 bits (98), Expect(2) = 1e-019
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3 / +1
Query: 180 VCVTGAGGFIASWLVKRLLEKGY 248
VCVTGAGGF+ASWLVK LL K +
Sbjct: 28 VCVTGAGGFVASWLVKLLLSKAH 96
Score = 35.4 bits (71), Expect(2) = 9e-006
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = -1 / -3
Query: 419 DRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVAL 240
DR +EDA+TA A+ VQQV AE+ + ++ +L I + AAD V
Sbjct: 270 DRASNMEDALTASNRRRNAVVVQQVSAEQLQPFPSTF*RLEMSILSITGIAHGAADSVVG 91
Query: 239 LQE 231
L E
Sbjct: 90 LGE 82
Score = 34.5 bits (69), Expect(2) = 9e-006
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -2 / -1
Query: 235 RRRLTSQEAMNPPAPVTQT 179
RR LTS EA PPAPVT T
Sbjct: 83 RRSLTSHEATKPPAPVTHT 27
Score = 32.7 bits (65), Expect(2) = 4e-004
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2 / -1
Query: 418 TGEAAWKTPSQPEKASARL 362
TG A WKTPSQP A A L
Sbjct: 269 TGLATWKTPSQPATADAML 213
Score = 31.8 bits (63), Expect(2) = 4e-004
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -3
Query: 260 AADCVALLQEALDEPGGNEPSSSGHAN 180
A V L +E LDEP G+E S +GHA+
Sbjct: 108 ADSVVGLGEEELDEP*GDEASCAGHAH 28
>gb|AJ436475.1|AJ436475 AJ436475 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200084D07F1, mRNA sequence
Length = 595
Score = 94.1 bits (199), Expect(2) = 2e-019
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +3 / +2
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAK 941
++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL +++ +
Sbjct: 8 ILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHE 187
Query: 942 LFPEYPVPTKCKD 980
++PE+PVP KC D
Sbjct: 188 MYPEFPVPDKCAD 226
Score = 51.0 bits (105), Expect = 2e-005
Identities = 30/67 (44%), Positives = 32/67 (47%)
Frame = -2 / -2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 225 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 46
Query: 799 T*VVADP 779
V DP
Sbjct: 45 AYVEDDP 25
Score = 22.6 bits (43), Expect(2) = 2e-019
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 311 LKETIESLKEKGFL 352
>gb|BQ665501.1|BQ665501 HX03O06u HX Hordeum vulgare subsp. vulgare cDNA clone HX03O06
3-PRIME, mRNA sequence
Length = 581
Score = 94.1 bits (199), Expect(2) = 2e-019
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +3 / -1
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAK 941
++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL +++ +
Sbjct: 581 ILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHE 402
Query: 942 LFPEYPVPTKCKD 980
++PE+PVP KC D
Sbjct: 401 MYPEFPVPDKCAD 363
Score = 51.0 bits (105), Expect = 2e-005
Identities = 30/67 (44%), Positives = 32/67 (47%)
Frame = -2 / +1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 364 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 543
Query: 799 T*VVADP 779
V DP
Sbjct: 544 AYVEDDP 564
Score = 22.6 bits (43), Expect(2) = 2e-019
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 278 LKETIESLKEKGFL 237
>gb|CA017187.1|CA017187 HV14G15u HV Hordeum vulgare subsp. vulgare cDNA clone HV14G15
3-PRIME, mRNA sequence
Length = 575
Score = 94.1 bits (199), Expect(2) = 2e-019
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +3 / -2
Query: 762 VMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAK 941
++K++ GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL +++ +
Sbjct: 574 ILKFINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHE 395
Query: 942 LFPEYPVPTKCKD 980
++PE+PVP KC D
Sbjct: 394 MYPEFPVPDKCAD 356
Score = 51.0 bits (105), Expect = 2e-005
Identities = 30/67 (44%), Positives = 32/67 (47%)
Frame = -2 / +3
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 357 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 536
Query: 799 T*VVADP 779
V DP
Sbjct: 537 AYVEDDP 557
Score = 22.6 bits (43), Expect(2) = 2e-019
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 271 LKETIESLKEKGFL 230
>gb|BJ457952.1|BJ457952 BJ457952 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak30a24 3', mRNA sequence
Length = 362
Score = 83.1 bits (175), Expect(2) = 2e-019
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +3 / -1
Query: 906 LHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMDFVPV 1058
LHR + +LAKLFPEYPVPT+C D+VNP YK +NQ+L+DLG+ F PV
Sbjct: 356 LHRQXVVHILAKLFPEYPVPTRCSDEVNPRKQPYKMSNQKLQDLGLKFTPV 204
Score = 56.5 bits (117), Expect(2) = 1e-010
Identities = 29/51 (56%), Positives = 29/51 (56%)
Frame = -2 / +1
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCR 905
TG PRS S WL L G T S HLVGTGYSGKSLAR RCR
Sbjct: 205 TGVNLRPRSCSFWLDIL*GCFRGFTSSEHLVGTGYSGKSLARMWTTXWRCR 357
Score = 46.4 bits (95), Expect = 4e-004
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -1 / +3
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGA 900
R E+ +IL+ LVG LV V+LV A GVL EELGED +V AVQ A
Sbjct: 207 RSELEAKILQLLVGHLVRLLPWVHLVRAPCWDGVLGEELGEDVDDVLAVQDA 362
Score = 33.1 bits (66), Expect(2) = 2e-019
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2 / -1
Query: 1067 LYETVTSLQEKGMLPV 1114
LYETV SLQEKG LPV
Sbjct: 194 LYETVKSLQEKGHLPV 147
Score = 29.9 bits (59), Expect(2) = 1e-010
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -3 / +1
Query: 1113 TGSMPFSWRLVTVS*R 1066
TG PFSWRL TVS R
Sbjct: 148 TGRCPFSWRLFTVSYR 195
Score = 26.3 bits (51), Expect(2) = 4.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2 / -3
Query: 953 VPRTHQVQGPG*PSGGRIQVHQPEAQGS 1036
VPR ++V G P+ +Q QPEA GS
Sbjct: 309 VPRPNKVL*RGEPTEAALQDVQPEAAGS 226
Score = 24.0 bits (46), Expect(2) = 4.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1 / -3
Query: 1036 WGWTSCRSAVPLRDGHQPPGE 1098
W + +RDG +PPGE
Sbjct: 225 WPQVHSCERLSVRDGEEPPGE 163
>gb|AL502427.1|AL502427 AL502427 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07I24u 3', mRNA sequence
Length = 700
Score = 96.8 bits (205), Expect = 3e-019
Identities = 34/79 (43%), Positives = 53/79 (67%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S + ++K + GS++TY N +V+V+DVA AH+ YE P A+GRY E +H DL
Sbjct: 620 NTSAEAILKXINGSSSTYANFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDL 441
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ +++PE+PVP KC D
Sbjct: 440 VKIIHEMYPEFPVPDKCAD 384
Score = 54.7 bits (113), Expect = 1e-006
Identities = 34/79 (43%), Positives = 36/79 (45%)
Frame = -2 / +1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL GTG SG RS LS P A G+SY R CA ATSLT T+ F
Sbjct: 385 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTHPKQKF 564
Query: 799 T*VVADPVRYFITWSVLAF 743
V DP F S L F
Sbjct: 565 AYVEDDPFIXFNIASALVF 621
>gb|BI958316.1|BI958316 HVSMEn0014G04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014G04f, mRNA sequence
Length = 666
Score = 53.8 bits (111), Expect(3) = 3e-019
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA D GV+RVV TSS+ V +P + + CW+D++YC W +KT ++
Sbjct: 387 AAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLXXACWTDIDYCDQNXVWSPASKTWLKKP 566
Query: 657 AWEVARKRG 683
A++ G
Sbjct: 567 HGSFAKENG 593
Score = 48.3 bits (99), Expect(3) = 3e-019
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+G TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 54 KGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 167
Score = 40.5 bits (82), Expect(2) = 3e-006
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -3
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
S+G T T *P +RRR T E M P APVT TV P
Sbjct: 166 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSP 56
Score = 31.8 bits (63), Expect(2) = 3.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 324 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 431
Score = 31.3 bits (62), Expect(2) = 3e-006
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA WKTP QP A++
Sbjct: 313 VQGEARWKTPEQPRAAAS 260
Score = 31.3 bits (62), Expect(3) = 3e-019
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 255 AMLAAARGCSGVFHLASPCTVD 320
Score = 21.7 bits (41), Expect(2) = 3.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H L R PP L PR +P
Sbjct: 86 RLHRLRDRAPPPRPRLLRPRRRPQP 160
>gb|BG343982.1|BG343982 HVSMEg0007E19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007E19f, mRNA sequence
Length = 799
Score = 62.0 bits (129), Expect(2) = 1e-018
Identities = 22/59 (37%), Positives = 37/59 (62%)
Frame = +3 / +2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGD 920
N S + ++K++ GS++TY N +V+V+DVA H+ YE P ++G+Y E LH +
Sbjct: 221 NTSAEAILKFINGSSSTYTNFCFGWVNVKDVALTHMLAYENPSSNGKYCMVERDLHHSE 397
Score = 51.9 bits (107), Expect(2) = 1e-018
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3 / +2
Query: 537 YMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
Y R P VD+T +S E C+ + WY +KT+AE+ AW+ A+ G
Sbjct: 14 YNGKPRTPDVVVDETWFSSAEVCEKNKQWYVLSKTLAEEAAWKFAKDNG 160
Score = 43.7 bits (89), Expect = 0.003
Identities = 27/67 (40%), Positives = 30/67 (44%)
Frame = -2 / -2
Query: 931 TRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAFT*VVADPVRYFITWSV 752
+RQ S R LS P G SY C ATSLT T+ V DP F S
Sbjct: 408 SRQGSEW*RSLSTMQYFPLLEGFSYASICVRATSLTFTHPKQKLVYVEDDPFINFNIASA 229
Query: 751 LAFTVGC 731
L F+VGC
Sbjct: 228 LVFSVGC 208
>gb|BI776330.2|BI776330 EBem04_SQ001_K08_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_K08 5', mRNA sequence
Length = 585
Score = 51.5 bits (106), Expect(3) = 1e-018
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYC 605
AA D GV+RVV TSS+ V +P + +D+ CW+D++YC
Sbjct: 413 AAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYC 541
Score = 48.3 bits (99), Expect(3) = 1e-018
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3 / +2
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+G TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 80 KGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 193
Score = 40.5 bits (82), Expect(2) = 3e-006
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
S+G T T *P +RRR T E M P APVT TV P
Sbjct: 192 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSP 82
Score = 31.8 bits (63), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 350 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 457
Score = 31.3 bits (62), Expect(3) = 1e-018
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 281 AMLAAARGCSGVFHLASPCTVD 346
Score = 31.3 bits (62), Expect(2) = 3e-006
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA WKTP QP A++
Sbjct: 339 VQGEARWKTPEQPRAAAS 286
>gb|AV934159.1|AV934159 AV934159 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11d16 5', mRNA sequence
Length = 339
Score = 71.2 bits (149), Expect(2) = 4e-018
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +3 / +3
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDP 284
S G+ VCVTGA G+IASW+VK LL++GYTV GTVR+ DP
Sbjct: 36 SGAAGKLVCVTGASGYIASWIVKLLLDRGYTVHGTVRDTXDP 161
Score = 52.4 bits (108), Expect(2) = 1e-009
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -2 / -3
Query: 286 FGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FGS TVP TV*P SRR LT Q+AM P APVTQT P
Sbjct: 163 FGSXVSRTVPWTV*PRSRRSLTIQDAMYPDAPVTQTSFP 47
Score = 42.8 bits (87), Expect = 0.005
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+W+ VPD A D VA ++E LD+PG + P +G A+
Sbjct: 164 IWVXGVPDGAMDGVAAVEEELDDPGRDVPGRAGDAD 57
Score = 40.9 bits (83), Expect(2) = 4e-018
Identities = 20/45 (44%), Positives = 21/45 (46%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HLRALDG S A GC+ VFHAASPV
Sbjct: 165 KTLHLRALDGANDRLHLFNANLLEEGSFDAAIDGCECVFHAASPV 299
Score = 31.8 bits (63), Expect = 9.9
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2 / +2
Query: 200 RVHCLLARQAPPGEGLHSPRH 262
RVH +L RQAPP LH P H
Sbjct: 77 RVHRVLDRQAPPRPRLHRPWH 139
Score = 30.9 bits (61), Expect(2) = 1e-009
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGEAAW T SQP A+++
Sbjct: 298 TGEAAWNTHSQPSMAASK 245
>gb|BE194523.2|BE194523 HVSMEh0085O04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0085O04f, mRNA sequence
Length = 842
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 47 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 163
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 248 SFNEAIAGCTGVFHVATPMDFDSQ 319
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 156 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 61
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 300 GVATWKTPVQPAMASLKL 247
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 295 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 170
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 172 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 68
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 377 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 478
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 441 MLTLPAEEVKTMRFTVPASLHAL 373
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 452 PRPAYDQDNWSDIDYCRRVK 511
>gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0023C20f, mRNA sequence
Length = 843
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 35 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 151
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 236 SFNEAIAGCTGVFHVATPMDFDSQ 307
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 144 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 49
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 288 GVATWKTPVQPAMASLKL 235
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 283 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 158
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 160 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 56
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 365 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 466
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 429 MLTLPAEEVKTMRFTVPASLHAL 361
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 440 PRPAYDQDNWSDIDYCRRVK 499
>gb|BG418662.2|BG418662 HVSMEk0023M18f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0023M18f, mRNA sequence
Length = 816
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 48 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 164
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 249 SFNEAIAGCTGVFHVATPMDFDSQ 320
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 157 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 62
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 301 GVATWKTPVQPAMASLKL 248
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 296 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 171
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 173 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 69
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 378 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 479
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 442 MLTLPAEEVKTMRFTVPASLHAL 374
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 453 PRPAYDQDNWSDIDYCRRVK 512
>gb|BE455022.2|BE455022 HVSMEh0095O05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095O05f, mRNA sequence
Length = 717
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 46 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 162
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 247 SFNEAIAGCTGVFHVATPMDFDSQ 318
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 155 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 60
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 299 GVATWKTPVQPAMASLKL 246
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 294 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 169
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 171 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 67
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 376 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 477
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 440 MLTLPAEEVKTMRFTVPASLHAL 372
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +1
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 451 PRPAYDQDNWSDIDYCRRVK 510
>gb|AL508144.1|AL508144 AL508144 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07O14V 5',
mRNA sequence
Length = 700
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 38 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 154
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 239 SFNEAIAGCTGVFHVATPMDFDSQ 310
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 147 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 52
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 291 GVATWKTPVQPAMASLKL 238
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 286 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 161
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 163 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 59
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 368 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 469
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 432 MLTLPAEEVKTMRFTVPASLHAL 364
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 443 PRPAYDQDNWSDIDYCRRVK 502
>gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014A07f, mRNA sequence
Length = 697
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 39 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 155
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 240 SFNEAIAGCTGVFHVATPMDFDSQ 311
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 148 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 53
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 292 GVATWKTPVQPAMASLKL 239
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 287 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 162
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 164 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 60
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 369 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 470
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 433 MLTLPAEEVKTMRFTVPASLHAL 365
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 444 PRPAYDQDNWSDIDYCRRVK 503
>gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010D1710 5-PRIME, mRNA sequence
Length = 683
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 44 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 160
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 245 SFNEAIAGCTGVFHVATPMDFDSQ 316
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 153 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 58
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 297 GVATWKTPVQPAMASLKL 244
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 292 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 167
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 169 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 65
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 374 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 475
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 438 MLTLPAEEVKTMRFTVPASLHAL 370
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 449 PRPAYDQDNWSDIDYCRRVK 508
>gb|CK125597.1|CK125597 BES1824109c14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C149 5-PRIME, mRNA sequence
Length = 679
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 53 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 169
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 254 SFNEAIAGCTGVFHVATPMDFDSQ 325
Score = 32.2 bits (64), Expect(4) = 2e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 162 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 67
Score = 29.0 bits (57), Expect(4) = 2e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 306 GVATWKTPVQPAMASLKL 253
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 301 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 176
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 178 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 74
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 383 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 484
Score = 26.7 bits (52), Expect(4) = 2e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 447 MLTLPAEEVKTMRFTVPASLHAL 379
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 458 PRPAYDQDNWSDIDYCRRVK 517
Score = 23.1 bits (44), Expect(4) = 2e-006
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -1 / -2
Query: 1085 W*PSRRGTADRHEVHPQIL 1029
W PS G D +HP IL
Sbjct: 570 WRPSLPGPLDTKYIHPVIL 514
>gb|BG415143.1|BG415143 HVSMEk0005F01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005F01f, mRNA sequence
Length = 657
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 25 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 141
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 226 SFNEAIAGCTGVFHVATPMDFDSQ 297
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 134 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 39
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 278 GVATWKTPVQPAMASLKL 225
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 273 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 148
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 150 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 46
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 355 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 456
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 419 MLTLPAEEVKTMRFTVPASLHAL 351
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +1
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 430 PRPAYDQDNWSDIDYCRRVK 489
>gb|BG414757.2|BG414757 HVSMEk0003J21f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003J21f, mRNA sequence
Length = 625
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 48 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 164
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 249 SFNEAIAGCTGVFHVATPMDFDSQ 320
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 157 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 62
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 301 GVATWKTPVQPAMASLKL 248
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 296 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 171
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 173 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 69
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 378 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 479
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 442 MLTLPAEEVKTMRFTVPASLHAL 374
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 453 PRPAYDQDNWSDIDYCRRVK 512
>gb|BQ458877.1|BQ458877 HA02P13r HA Hordeum vulgare subsp. vulgare cDNA clone HA02P13
5-PRIME, mRNA sequence
Length = 622
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 48 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 164
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 249 SFNEAIAGCTGVFHVATPMDFDSQ 320
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 157 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 62
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 301 GVATWKTPVQPAMASLKL 248
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 296 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 171
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 173 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 69
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 378 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 479
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 442 MLTLPAEEVKTMRFTVPASLHAL 374
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 453 PRPAYDQDNWSDIDYCRRVK 512
>gb|BM373176.2|BM373176 EBma04_SQ003_G09_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ003_G09 5', mRNA sequence
Length = 575
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 43 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 159
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 244 SFNEAIAGCTGVFHVATPMDFDSQ 315
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 152 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 57
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 296 GVATWKTPVQPAMASLKL 243
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 291 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 166
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 168 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 64
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 373 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 474
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 437 MLTLPAEEVKTMRFTVPASLHAL 369
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +1
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 448 PRPAYDQDNWSDIDYCRRVK 507
>gb|BQ760073.1|BQ760073 EBpi07_SQ003_J03_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_J03 5', mRNA sequence
Length = 558
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 56 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 172
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 257 SFNEAIAGCTGVFHVATPMDFDSQ 328
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 165 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 70
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 309 GVATWKTPVQPAMASLKL 256
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 304 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 179
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 181 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 77
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 386 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 487
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 450 MLTLPAEEVKTMRFTVPASLHAL 382
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 461 PRPAYDQDNWSDIDYCRRVK 520
>gb|BM098777.2|BM098777 EBpi05_SQ002_A12_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_A12 5', mRNA sequence
Length = 532
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 43 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 159
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 244 SFNEAIAGCTGVFHVATPMDFDSQ 315
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 152 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 57
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 296 GVATWKTPVQPAMASLKL 243
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 291 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 166
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 168 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 64
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 373 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 474
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 437 MLTLPAEEVKTMRFTVPASLHAL 369
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +1
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 448 PRPAYDQDNWSDIDYCRRVK 507
>gb|BM373054.2|BM373054 EBma04_SQ002_O16_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_O16 5', mRNA sequence
Length = 504
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 15 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 131
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 216 SFNEAIAGCTGVFHVATPMDFDSQ 287
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 124 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 29
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 268 GVATWKTPVQPAMASLKL 215
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 263 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 138
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 140 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 36
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 345 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 446
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 409 MLTLPAEEVKTMRFTVPASLHAL 341
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 420 PRPAYDQDNWSDIDYCRRVK 479
>gb|BE454821.3|BE454821 HVSMEh0095D03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095D03f, mRNA sequence
Length = 502
Score = 58.3 bits (121), Expect(4) = 2e-017
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 35 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 151
Score = 33.1 bits (66), Expect(4) = 2e-017
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 236 SFNEAIAGCTGVFHVATPMDFDSQ 307
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 144 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 49
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 288 GVATWKTPVQPAMASLKL 235
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 283 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 158
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 160 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 56
Score = 27.2 bits (53), Expect(4) = 2e-017
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 365 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 466
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 429 MLTLPAEEVKTMRFTVPASLHAL 361
Score = 25.4 bits (49), Expect(4) = 2e-017
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 440 PRPAYDQDNWSDIDYCRRVK 499
>gb|AV918868.1|AV918868 AV918868 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i12 3', mRNA sequence
Length = 694
Score = 76.2 bits (160), Expect(3) = 2e-017
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +3 / -3
Query: 801 NAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKD 980
N +V+V+DVA AH+ YE P A+GRY E +H DL +++ +++PE+PVP KC D
Sbjct: 500 NFCFGWVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCAD 321
Score = 46.9 bits (96), Expect = 3e-004
Identities = 26/55 (47%), Positives = 28/55 (50%)
Frame = -2 / +1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTY 815
S HL GTG SG RS LS P A G+SY R CA ATSLT T+
Sbjct: 322 SAHLSGTGNSGYISCMILTRSEW*MTLSTMQYLPFAEGSSYARICARATSLTFTH 486
Score = 28.1 bits (55), Expect(3) = 2e-017
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3 / -1
Query: 618 NWYCYAKTVAEQGAWEVARKRG 683
N CY + AE+ AW+ A+ G
Sbjct: 685 NGMCYPRPFAEEAAWKFAKDNG 620
Score = 22.6 bits (43), Expect(3) = 2e-017
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 1067 LYETVTSLQEKGML 1108
L ET+ SL+EKG L
Sbjct: 236 LKETIESLKEKGFL 195
>gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29b22 3', mRNA sequence
Length = 633
Score = 56.1 bits (116), Expect(2) = 2e-017
Identities = 26/72 (36%), Positives = 40/72 (55%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S+ ++ +L G + V VRDVA+A + +YEAP A GR+ICA + +L
Sbjct: 460 NTSSQFLIYFLRGGPDETRDKLWHIVDVRDVADALLLLYEAPEATGRHICAPHFITAREL 281
Query: 924 CRVLAKLFPEYP 959
+L ++P YP
Sbjct: 280 LGLLKSMYPGYP 245
Score = 53.3 bits (110), Expect(2) = 2e-017
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / -3
Query: 573 DDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
D++CWSD E+C++ Q+WY AK AE A E R+ G
Sbjct: 631 DESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRETG 521
Score = 32.7 bits (65), Expect = 5.3
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = -2 / +3
Query: 958 GYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCT 818
GY G L S AQM P A GAS +R+ ASATS T T
Sbjct: 246 GYPGYMLLSRPSSSRAVMK*GAQMCLPVASGAS*SRSSASATSRTST 386
>gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29b22 5', mRNA sequence
Length = 548
Score = 56.1 bits (116), Expect(2) = 2e-017
Identities = 26/72 (36%), Positives = 40/72 (55%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S+ ++ +L G + V VRDVA+A + +YEAP A GR+ICA + +L
Sbjct: 247 NTSSQFLIYFLRGGPDETRDKLWHIVDVRDVADALLLLYEAPEATGRHICAPHFITAREL 426
Query: 924 CRVLAKLFPEYP 959
+L ++P YP
Sbjct: 427 LGLLKSMYPGYP 462
Score = 53.3 bits (110), Expect(2) = 2e-017
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3 / +1
Query: 573 DDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
D++CWSD E+C++ Q+WY AK AE A E R+ G
Sbjct: 76 DESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRETG 186
Score = 32.7 bits (65), Expect = 5.3
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = -2 / -1
Query: 958 GYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCT 818
GY G L S AQM P A GAS +R+ ASATS T T
Sbjct: 461 GYPGYMLLSRPSSSRAVMK*GAQMCLPVASGAS*SRSSASATSRTST 321
>gb|CA004617.1|CA004617 HS18C15r HS Hordeum vulgare subsp. vulgare cDNA clone HS18C15
5-PRIME, mRNA sequence
Length = 417
Score = 79.9 bits (168), Expect(2) = 5e-017
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 83 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 214
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 216 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 88
Score = 39.6 bits (80), Expect = 0.045
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 130 LHRLLARQAPPPPGLHRPRH 189
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -3
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 214 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 107
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 334 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 224
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 345 GEAVWKTQSQPAMAASKV 292
Score = 28.6 bits (56), Expect(2) = 5e-017
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 305 AIAGCDCVFHTASP 346
>gb|BU980158.1|BU980158 HA18N13r HA Hordeum vulgare subsp. vulgare cDNA clone HA18N13
5-PRIME, mRNA sequence
Length = 399
Score = 79.9 bits (168), Expect(2) = 5e-017
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 55 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 186
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 188 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 60
Score = 39.6 bits (80), Expect = 0.045
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 102 LHRLLARQAPPPPGLHRPRH 161
Score = 38.2 bits (77), Expect(2) = 4e-005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 186 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 79
Score = 29.5 bits (58), Expect(2) = 4e-005
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 306 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 196
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
GEA WKT SQP A++++
Sbjct: 317 GEAVWKTQSQPAMAASKV 264
Score = 28.6 bits (56), Expect(2) = 5e-017
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / +1
Query: 375 AFSGCDGVFHAASP 416
A +GCD VFH ASP
Sbjct: 277 AIAGCDCVFHTASP 318
>gb|CK122370.1|CK122370 BES1824103a12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A123 5-PRIME, mRNA sequence
Length = 463
Score = 76.7 bits (161), Expect(2) = 6e-017
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQNWYCYAKTVAEQG 656
AA D GV+RVV TSS+ V +P + +D+ CW+D++YC WY +KT+AE+
Sbjct: 254 AAKDAGGVRRVVVTSSVSAVVPSPGWPAGEVLDERCWTDIDYCDKNGVWYPASKTLAEKA 433
Query: 657 AWEVARKRG 683
AW+ A + G
Sbjct: 434 AWKFAEENG 460
Score = 31.8 bits (63), Expect = 9.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 191 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 298
Score = 31.3 bits (62), Expect(2) = 6e-017
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 122 AMLAAARGCSGVFHLASPCTVD 187
>gb|CA023175.1|CA023175 HZ45H08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45H08
5-PRIME, mRNA sequence
Length = 412
Score = 72.5 bits (152), Expect(2) = 6e-017
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ V TGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 98 MSSGMGKVVXXTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 229
Score = 53.3 bits (110), Expect(2) = 6e-009
Identities = 27/43 (62%), Positives = 27/43 (62%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APV T P PE
Sbjct: 231 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVXXTTFPIPE 103
Score = 39.6 bits (80), Expect = 0.045
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +1
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 145 LHRLLARQAPPPPGLHRPRH 204
Score = 38.2 bits (77), Expect(2) = 2e-004
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 229 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGXAH 122
Score = 35.4 bits (71), Expect(2) = 6e-017
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASP 416
K HL+AL+G + A +GCD VFH ASP
Sbjct: 230 KTLHLQALEGAKERLHLFKASLXEEGTXXAAIAGCDCVFHTASP 361
Score = 27.6 bits (54), Expect(2) = 6e-009
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKAS 371
GEA WKT SQP A+
Sbjct: 360 GEAVWKTQSQPAMAA 316
Score = 27.2 bits (53), Expect(2) = 2e-004
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G + + Q E+ + + G+ +G QV
Sbjct: 349 VEDTVAAGDGSXXSAFFXQACFEQVQPLLGSFQGLQV 239
>gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 3', mRNA sequence
Length = 681
Score = 68.0 bits (142), Expect(2) = 9e-017
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3 / -1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 492 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 313
Query: 924 CRVLAKLFPEYPVP 965
+L L+P Y P
Sbjct: 312 INILKTLYPTYTYP 271
Score = 52.8 bits (109), Expect = 4e-006
Identities = 34/83 (40%), Positives = 40/83 (48%)
Frame = -2 / +2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S+ +G Y G + R S QM RP A G SY R ASATS T T F
Sbjct: 257 SVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLF 436
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
+ V P+RY +LAFTVGC
Sbjct: 437 STVSCSPLRYLRRILLLAFTVGC 505
Score = 39.6 bits (80), Expect(2) = 9e-017
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3 / -1
Query: 564 KPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
K + WSD + C+ ++WY +KT AE+ A+ A K G
Sbjct: 672 KVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTG 553
>gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 3', mRNA sequence
Length = 662
Score = 68.0 bits (142), Expect(2) = 9e-017
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 474 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 295
Query: 924 CRVLAKLFPEYPVP 965
+L L+P Y P
Sbjct: 294 INILKTLYPTYTYP 253
Score = 52.8 bits (109), Expect = 4e-006
Identities = 34/83 (40%), Positives = 40/83 (48%)
Frame = -2 / +2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S+ +G Y G + R S QM RP A G SY R ASATS T T F
Sbjct: 239 SVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLF 418
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
+ V P+RY +LAFTVGC
Sbjct: 419 STVSCSPLRYLRRILLLAFTVGC 487
Score = 39.6 bits (80), Expect(2) = 9e-017
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3 / -3
Query: 564 KPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
K + WSD + C+ ++WY +KT AE+ A+ A K G
Sbjct: 654 KVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTG 535
>gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 3', mRNA sequence
Length = 663
Score = 68.0 bits (142), Expect(2) = 9e-017
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3 / -1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 474 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 295
Query: 924 CRVLAKLFPEYPVP 965
+L L+P Y P
Sbjct: 294 INILKTLYPTYTYP 253
Score = 52.8 bits (109), Expect = 4e-006
Identities = 34/83 (40%), Positives = 40/83 (48%)
Frame = -2 / +2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S+ +G Y G + R S QM RP A G SY R ASATS T T F
Sbjct: 239 SVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLF 418
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
+ V P+RY +LAFTVGC
Sbjct: 419 STVSCSPLRYLRRILLLAFTVGC 487
Score = 39.6 bits (80), Expect(2) = 9e-017
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3 / -1
Query: 564 KPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
K + WSD + C+ ++WY +KT AE+ A+ A K G
Sbjct: 654 KVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTG 535
>gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 3', mRNA sequence
Length = 661
Score = 68.0 bits (142), Expect(2) = 9e-017
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3 / -1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 475 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 296
Query: 924 CRVLAKLFPEYPVP 965
+L L+P Y P
Sbjct: 295 INILKTLYPTYTYP 254
Score = 52.8 bits (109), Expect = 4e-006
Identities = 34/83 (40%), Positives = 40/83 (48%)
Frame = -2 / +3
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S+ +G Y G + R S QM RP A G SY R ASATS T T F
Sbjct: 240 SVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLF 419
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
+ V P+RY +LAFTVGC
Sbjct: 420 STVSCSPLRYLRRILLLAFTVGC 488
Score = 39.6 bits (80), Expect(2) = 9e-017
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3 / -1
Query: 564 KPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
K + WSD + C+ ++WY +KT AE+ A+ A K G
Sbjct: 655 KVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTG 536
>gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 3', mRNA sequence
Length = 630
Score = 68.0 bits (142), Expect(2) = 9e-017
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3 / -1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 444 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 265
Query: 924 CRVLAKLFPEYPVP 965
+L L+P Y P
Sbjct: 264 INILKTLYPTYTYP 223
Score = 52.8 bits (109), Expect = 4e-006
Identities = 34/83 (40%), Positives = 40/83 (48%)
Frame = -2 / +2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S+ +G Y G + R S QM RP A G SY R ASATS T T F
Sbjct: 209 SVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLF 388
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
+ V P+RY +LAFTVGC
Sbjct: 389 STVSCSPLRYLRRILLLAFTVGC 457
Score = 39.6 bits (80), Expect(2) = 9e-017
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3 / -1
Query: 564 KPVDDTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
K + WSD + C+ ++WY +KT AE+ A+ A K G
Sbjct: 624 KVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTG 505
>gb|BG418101.2|BG418101 HVSMEk0021F02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0021F02f, mRNA sequence
Length = 671
Score = 58.3 bits (121), Expect(4) = 1e-016
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 35 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 151
Score = 33.1 bits (66), Expect(4) = 1e-016
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 236 SFNEAIAGCTGVFHVATPMDFDSQ 307
Score = 32.2 bits (64), Expect(3) = 8e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 144 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 49
Score = 29.0 bits (57), Expect(3) = 8e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 288 GVATWKTPVQPAMASLKL 235
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 283 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 158
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 160 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 56
Score = 25.4 bits (49), Expect(4) = 1e-016
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 440 PRPAYDQDNWSDIDYCRRVK 499
Score = 25.4 bits (49), Expect(3) = 8e-006
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2 / -3
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E V T RFT +S A+
Sbjct: 429 MLTLPAEKVKTMRFTVPASLHAL 361
Score = 24.4 bits (47), Expect(4) = 1e-016
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFT S G+V + P+ D+
Sbjct: 365 ACKEAGTVKRIVFTFSAGSVNIEERPRPAYDQDN 466
>gb|BE602882.1|BE602882 HVSMEh0100J05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100J05f, mRNA sequence
Length = 519
Score = 58.3 bits (121), Expect(4) = 1e-016
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 50 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 166
Score = 33.1 bits (66), Expect(4) = 1e-016
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 251 SFNEAIAGCTGVFHVATPMDFDSQ 322
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 159 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 64
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 303 GVATWKTPVQPAMASLKL 250
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 298 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 173
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 175 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 71
Score = 26.7 bits (52), Expect(4) = 1e-016
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 380 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYXPDN 481
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 444 MLTLPAEEVKTMRFTVPASLHAL 376
Score = 23.1 bits (44), Expect(4) = 1e-016
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 585 WSDLEYCKNTQ 617
WSD++YC+ +
Sbjct: 482 WSDIDYCRRVK 514
>gb|AV936412.1|AV936412 AV936412 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11d15 3', mRNA sequence
Length = 303
Score = 88.1 bits (186), Expect = 1e-016
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +3 / -2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS V+ + GS+ T N A +V+VRDVA AH+ YE P A+GRY E H +L
Sbjct: 296 NASVXAVLNLINGSSPTCPNYAHGWVNVRDVALAHILAYEVPSANGRYCIVERVAHYSEL 117
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ K++P P+P KC D
Sbjct: 116 VKIICKMYPNXPLPDKCAD 60
Score = 48.3 bits (99), Expect = 1e-004
Identities = 33/81 (40%), Positives = 36/81 (44%)
Frame = -2 / +1
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S HL G+G G L S LS P A G SY R CA ATSLT T A
Sbjct: 61 SAHLSGSGXFGYILHMILTSSE**ATLSTMQYLPFAEGTSYARICARATSLTFTQPWA*L 240
Query: 799 T*VVADPVRYFITWSVLAFTV 737
V DP+ F T LA +V
Sbjct: 241 GHVGDDPLIRFXTAXTLALSV 303
>gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0014B22f, mRNA sequence
Length = 867
Score = 54.2 bits (112), Expect(2) = 1e-016
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +3 / +1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N S+ ++ G N V VRDVA+A + VYE ++GRYIC + + DL
Sbjct: 169 NTSSKFLIYVTNGGPDVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDL 348
Query: 924 CRVLAKLFPEY 956
+L K+ P+Y
Sbjct: 349 VDLLKKMHPQY 381
Score = 52.8 bits (109), Expect(2) = 1e-016
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3 / +1
Query: 576 DTCWSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
++CWSD ++C+ ++WY AK VAEQ ++E + K G
Sbjct: 1 ESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNG 108
>gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 3', mRNA sequence
Length = 751
Score = 68.0 bits (142), Expect(2) = 1e-016
Identities = 31/74 (41%), Positives = 41/74 (55%)
Frame = +3 / -2
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS+ ++KYL G T N V VRDVA+A + YE P A GRYIC+ + D+
Sbjct: 477 NASSKILLKYLKGEHETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDV 298
Query: 924 CRVLAKLFPEYPVP 965
+L L+P Y P
Sbjct: 297 INILKTLYPTYTYP 256
Score = 52.8 bits (109), Expect = 4e-006
Identities = 34/83 (40%), Positives = 40/83 (48%)
Frame = -2 / +2
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S+ +G Y G + R S QM RP A G SY R ASATS T T F
Sbjct: 242 SVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLF 421
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
+ V P+RY +LAFTVGC
Sbjct: 422 STVSCSPLRYLRRILLLAFTVGC 490
Score = 39.1 bits (79), Expect(2) = 1e-016
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3 / -2
Query: 585 WSDLEYCKNTQNWYCYAKTVAEQGAWEVARKRG 683
WSD + C+ ++WY +KT AE+ A+ A K G
Sbjct: 636 WSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTG 538
>gb|CA001406.1|CA001406 HS18B01u HS Hordeum vulgare subsp. vulgare cDNA clone HS18B01
3-PRIME, mRNA sequence
Length = 481
Score = 79.9 bits (168), Expect(2) = 1e-016
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3 / -2
Query: 867 PHAHGRYICAESTLHRGDLCRVLAKLFPEYPVPTKCKDQVNPPVVGYKFTNQRLKDLGMD 1046
P A GRY+C + LHR ++L LFP+Y V KC+D P YKF+N+RL++LG++
Sbjct: 456 PDARGRYLCIGAVLHRAHFLQLLGDLFPQYHVTAKCEDDGKPMEKPYKFSNRRLRELGLE 277
Query: 1047 FVPV 1058
F P+
Sbjct: 276 FTPL 265
Score = 65.7 bits (137), Expect = 6e-010
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = -1 / +1
Query: 1055 RHEVHPQILEPLVGELVSYHRRVNLVLALGGYGVLREELGEDAAEVAAVQGALGADVAAV 876
R E+ Q+ +P V ELV + +V ALGGY VLREE+ E+ EV AVQ A+VAA
Sbjct: 268 RSELQSQLPQPSVRELVRLLHGLAIVFALGGYVVLREEVAEELEEVGAVQHGADAEVAAA 447
Query: 875 RVG 867
RVG
Sbjct: 448 RVG 456
Score = 49.2 bits (101), Expect = 6e-005
Identities = 28/63 (44%), Positives = 32/63 (50%)
Frame = -2 / +2
Query: 1054 GTKSIPRSLSLWLVNLYPTTGGLTWSLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPC 875
G S P SLSL NLY + GL S HL T Y GK R+ ++ RC Q *RP
Sbjct: 269 GVNSNPSSLSLRFENLYGFSMGLPSSSHLAVTWYCGKRSPRSWRKWARCSTAPMQR*RPR 448
Query: 874 AWG 866
A G
Sbjct: 449 ASG 457
Score = 27.2 bits (53), Expect(2) = 1e-016
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 1061 QCLYETVTSLQEKGML 1108
+ LYETVT LQ+KG L
Sbjct: 261 ESLYETVTCLQKKGHL 214
>gb|CA015542.1|CA015542 HT14K06r HT Hordeum vulgare subsp. vulgare cDNA clone HT14K06
5-PRIME, mRNA sequence
Length = 620
Score = 59.7 bits (124), Expect(3) = 1e-016
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKND 293
+T CVTG G+IAS L+K LLEKGY V+ TVRNP D + +
Sbjct: 112 KTACVTGGSGYIASALLKMLLEKGYAVKTTVRNPDDAEKN 231
Score = 40.5 bits (82), Expect(2) = 1e-006
Identities = 20/38 (52%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T PFS L+S +AM P PVT V
Sbjct: 227 FSASSGFLTVVFTAYPFSSSILSSADAMYPLPPVTHAV 114
Score = 35.9 bits (72), Expect(3) = 1e-016
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3 / +1
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQ 617
VKRVV T S V P +D+ WSD+E+ ++T+
Sbjct: 451 VKRVVLT*SAAAVSSRPLEGDGHVLDEEFWSDVEFLRSTK 570
Score = 32.2 bits (64), Expect(2) = 1e-006
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1 / -3
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEE 333
R G ED V AG+G+ +A Q+GAE+
Sbjct: 354 RSGDEEDVVAAGDGVVEAALFTQIGAED 271
Score = 28.6 bits (56), Expect(3) = 1e-016
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S A +GCD VF A+PV +PE
Sbjct: 301 SFDHAVAGCDYVFLVAAPVNLNPE 372
>gb|BE601965.2|BE601965 HVSMEh0100J12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100J12f, mRNA sequence
Length = 710
Score = 57.4 bits (119), Expect(4) = 3e-016
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNP 275
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P
Sbjct: 36 GNKGPVVVTGASGFVRSWLVMKLLQAGYTVRATVRDP 146
Score = 31.8 bits (63), Expect(2) = 0.16
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 145 GSRTVARTVYPA*RSFMTSHDLTKPDAPVTTT 50
Score = 29.5 bits (58), Expect(4) = 3e-016
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3 / +3
Query: 372 EAFSGCDGVFHAASPVTDDPE 434
+A +G DGVFH A+P+ D +
Sbjct: 246 QAIAGLDGVFHVATPMDFDSQ 308
Score = 27.2 bits (53), Expect(4) = 3e-016
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 366 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 467
Score = 26.7 bits (52), Expect(2) = 0.16
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 430 MLTLPAEEVKTMRFTVPASLHAL 362
Score = 25.4 bits (49), Expect(4) = 3e-016
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 441 PRPAYDQDNWSDIDYCRRVK 500
>gb|AL507235.1|AL507235 AL507235 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01F03V 5',
mRNA sequence
Length = 526
Score = 56.1 bits (116), Expect(4) = 4e-016
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V V GA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 32 GNKGPVVVXGASGFVGSWLVMKLLQAGYTVRATVRDPAN 148
Score = 33.1 bits (66), Expect(4) = 4e-016
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 233 SFNEAIAGCTGVFHVATPMDFDSQ 304
Score = 29.9 bits (59), Expect(3) = 1e-005
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P AP T T
Sbjct: 141 GSRTVARTVYPAWRSFMTSHDPTKPDAPXTTT 46
Score = 29.0 bits (57), Expect(3) = 1e-005
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 285 GVATWKTPVQPAMASLKL 232
Score = 26.7 bits (52), Expect(3) = 1e-005
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 426 MLTLPAEEVKTMRFTVPASLHAL 358
Score = 26.3 bits (51), Expect(4) = 4e-016
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTV 536
A + VKR+VFTSS G+V
Sbjct: 362 ACKEAGTVKRIVFTSSAGSV 421
Score = 26.3 bits (51), Expect(2) = 4.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VED A +GL +A + QVG + + + G+ K Q + L
Sbjct: 280 GDVEDXGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 155
Score = 24.0 bits (46), Expect(2) = 4.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1 / -1
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+ RV D D V L+E DEP E S H
Sbjct: 148 VGRVADGCPDGVPGLEELHDEPRPYETRRSXH 53
Score = 23.5 bits (45), Expect(4) = 4e-016
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3 / +3
Query: 564 KPVDDTCWSDLEYCKNTQN 620
+P WSD++YC Q+
Sbjct: 444 QPTTKDNWSDIDYCPPRQD 500
>gb|BM443024.2|BM443024 EBro02_SQ002_D15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_D15 5', mRNA sequence
Length = 276
Score = 85.8 bits (181), Expect = 5e-016
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+++G+GRTVCVTGAGGFIASWLVK LLEKGY V GTVRNP D
Sbjct: 130 VATGRGRTVCVTGAGGFIASWLVKLLLEKGYAVHGTVRNPDD 255
Score = 68.4 bits (143), Expect = 9e-011
Identities = 29/39 (74%), Positives = 31/39 (79%)
Frame = -2 / -2
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
S+GF TVP T *PFSRR LTS +AM PPAPVT TVRP P
Sbjct: 254 SSGFRTVPWTA*PFSRRSLTSHDAMKPPAPVTHTVRPRP 138
Score = 40.0 bits (81), Expect = 0.033
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQE 271
R+H ++A QAPPGEGL PRH E
Sbjct: 174 RLHRVMAGQAPPGEGLRRPRHRPE 245
Score = 39.1 bits (79), Expect = 0.062
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -1 / -1
Query: 281 IHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
I R+PD A D VALLQE LD+P +E + + H +
Sbjct: 255 IIRIPDGAVDGVALLQEELDQP*RDEAAGARHTH 154
Score = 32.2 bits (64), Expect = 7.2
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1 / +2
Query: 217 GSSSASWRRATQSAARSGTL 276
G SS+SWRRAT S A SG L
Sbjct: 191 GWSSSSWRRATPSTAPSGIL 250
>gb|BF265663.2|BF265663 HV_CEa0013A04f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013A04f, mRNA sequence
Length = 767
Score = 66.6 bits (139), Expect(2) = 8e-016
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 171 GRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDP 284
G+ VCVTGA +IASW+VK LL++GYTV GTVR+ DP
Sbjct: 80 GKLVCVTGASRYIASWIVKLLLDRGYTVHGTVRDTADP 193
Score = 46.0 bits (94), Expect(2) = 9e-006
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = -2 / -3
Query: 286 FGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
FGS TVP TV*P SRR T Q+AM APVTQT P
Sbjct: 195 FGSAVSRTVPCTV*PRSRRSFTIQDAMYLDAPVTQTSFP 79
Score = 37.7 bits (76), Expect(2) = 8e-016
Identities = 19/45 (42%), Positives = 20/45 (44%)
Frame = +3 / +2
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HLRALDG +SL A GC FHA SPV
Sbjct: 197 KTLHLRALDGANDRLLLFNANLLEERSLHAAIDGCQCEFHADSPV 331
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+W+ VPD A VA ++E L +PG + P +G A+
Sbjct: 196 IWVSGVPDGAMYGVAAVKEKLHDPGRDVPGRAGDAD 89
Score = 24.0 bits (46), Expect(2) = 9e-006
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TGE+AW + QP A+ +
Sbjct: 330 TGESAWNSHWQPSMAACK 277
>gb|BG415589.2|BG415589 HVSMEk0007B19f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007B19f, mRNA sequence
Length = 653
Score = 56.5 bits (117), Expect(4) = 8e-016
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 63 VVVTGASGFVWSWLVMKLLQAGYTVRATVRDPAN 164
Score = 33.1 bits (66), Expect(4) = 8e-016
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 249 SFNEAIAGCTGVFHVATPMDFDSQ 320
Score = 31.8 bits (63), Expect(2) = 0.004
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 157 GSRTVARTVYPAWRSFMTSHDHTKPDAPVTTT 62
Score = 29.0 bits (57), Expect(2) = 0.004
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 301 GVATWKTPVQPAMASLKL 248
Score = 28.1 bits (55), Expect(2) = 0.28
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 296 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 171
Score = 26.3 bits (51), Expect(2) = 0.28
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 173 LLDVGRVADGCPDGVPGLEELHDEPRPYET*RSGH 69
Score = 25.4 bits (49), Expect(4) = 8e-016
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 558 PSKPVDDTCWSDLEYCKNTQ 617
P D WSD++YC+ +
Sbjct: 453 PMPAYDQDNWSDIDYCRRVK 512
Score = 23.1 bits (44), Expect(4) = 8e-016
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS +V ++ P+ D+
Sbjct: 378 ACKEAGTVKRIVFTSSACSVNIDERPMPAYDQDN 479
>gb|BI957946.1|BI957946 HVSMEn0012F23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0012F23f, mRNA sequence
Length = 479
Score = 84.9 bits (179), Expect = 1e-015
Identities = 34/49 (69%), Positives = 38/49 (77%)
Frame = +3 / +1
Query: 159 SSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRA 305
S+G G+TVCVTGAGG+I SWLVK LL KGY V+GT RNP D K HL A
Sbjct: 67 STGHGQTVCVTGAGGYIGSWLVKLLLNKGYAVQGTFRNPDDAKISHLEA 213
Score = 62.9 bits (131), Expect = 4e-009
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = -2 / -1
Query: 295 WSFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPED 158
W F S+GFL VP T P RR LTS + M PPAPVT TV P P D
Sbjct: 203 WEIFASSGFLKVPCTAYPLLRRSLTSHDPM*PPAPVTHTVCPWPVD 66
Score = 37.7 bits (76), Expect = 0.16
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H ++ARQAPP +G+ RH QEP
Sbjct: 108 RLHRVVARQAPPQQGVRRARHLQEP 182
Score = 33.1 bits (66), Expect = 3.8
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -1 / -3
Query: 323 VDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
+ + K QV L + VP+ A V L++E LDEP + + +GHA+
Sbjct: 231 IPSSKKSLQVGNLRVIGVPEGALHGVPLVEEELDEPRPDVAAGAGHAH 88
>gb|AL500247.1|AL500247 AL500247 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05K15r 3', mRNA sequence
Length = 573
Score = 84.5 bits (178), Expect = 1e-015
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +3 / -3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
NAS + V+ + GS+ T N A +V+VRDVA AH+ YE P A+GRY E H +L
Sbjct: 559 NASVEAVLNLINGSSPTCPNYAHGWVNVRDVALAHILAYEVPSANGRYCIVERVAHYSEL 380
Query: 924 CRVLAKLFPEYPVPTKCKD 980
+++ K++P P+P K D
Sbjct: 379 VKIICKMYPNIPLPDKXAD 323
Score = 48.7 bits (100), Expect = 8e-005
Identities = 34/83 (40%), Positives = 37/83 (44%)
Frame = -2 / +3
Query: 979 SLHLVGTGYSGKSLARTRQRSPRCRVLSAQM*RPCAWGASYTRTCASATSLTCTYACAAF 800
S L G+G G L S LS P A G SY R CA ATSLT T A
Sbjct: 324 SAXLSGSGMFGYILHMILTSSE**ATLSTMQYLPFAEGTSYARICARATSLTFTQPWA*L 503
Query: 799 T*VVADPVRYFITWSVLAFTVGC 731
V DP+ F T S LA +V C
Sbjct: 504 GHVGDDPLIRFKTASTLALSVXC 572
>gb|AL500592.1|AL500592 AL500592 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01C19u 3', mRNA sequence
Length = 472
Score = 55.1 bits (114), Expect(3) = 3e-015
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3 / -1
Query: 990 PPVVGYKFTNQRLKDLGMDFVPV 1058
PPV GYKFTNQRLKDLGM+FVPV
Sbjct: 427 PPVKGYKFTNQRLKDLGMEFVPV 359
Score = 53.8 bits (111), Expect(2) = 6e-012
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -2 / +3
Query: 1057 TGTKSIPRSLSLWLVNLYPTTGGL 986
TGT SIPRSLSLWLVNLYP TGG+
Sbjct: 360 TGTNSIPRSLSLWLVNLYPFTGGV 431
Score = 46.4 bits (95), Expect(3) = 3e-015
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +2 / -1
Query: 1058 LQCLYETVTSLQEKGMLPVLPTKQD 1132
LQ +YETV SLQEKGMLPVLP D
Sbjct: 358 LQSIYETVKSLQEKGMLPVLPPSDD 284
Score = 46.0 bits (94), Expect(2) = 1e-005
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -1 / +2
Query: 1055 RHEVHPQILEPLVGELVSYHR 993
RHE+HPQ+LEPLV ELV +HR
Sbjct: 362 RHELHPQVLEPLVSELVPFHR 424
Score = 45.5 bits (93), Expect(2) = 3e-008
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2 / -3
Query: 989 PSGGRIQVHQPEAQGSGDGLRAG 1057
P+G R+QVH PEAQG GDG+RAG
Sbjct: 428 PTGERVQVH*PEAQGPGDGVRAG 360
Score = 40.0 bits (81), Expect = 0.033
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +1 / -2
Query: 1006 TSSPTRGSRIWGWTSCR 1056
TSS TRGSR WGW+SCR
Sbjct: 411 TSSLTRGSRTWGWSSCR 361
Score = 37.3 bits (75), Expect(2) = 6e-012
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -3 / +3
Query: 1119 GSTGSMPFSWRLVTVS 1072
GSTGS+PFSWRL TVS
Sbjct: 297 GSTGSIPFSWRLFTVS 344
Score = 33.1 bits (66), Expect(2) = 3e-008
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +1 / -3
Query: 1069 LRDGHQPPGERHAARASDKTR 1131
+RDG +PPGER AA A+ K R
Sbjct: 347 IRDGEEPPGERDAAGATTK*R 285
Score = 23.5 bits (45), Expect(2) = 1e-005
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / +1
Query: 1115 ARAACLSPGGW*PSR 1071
A AA LSPGG PSR
Sbjct: 301 APAASLSPGGSSPSR 345
Score = 21.7 bits (41), Expect(3) = 3e-015
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +3 / -3
Query: 969 KCKDQVNP 992
+CKD+VNP
Sbjct: 449 RCKDEVNP 426
>gb|BG414416.1|BG414416 HVSMEk0002H01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002H01f, mRNA sequence
Length = 895
Score = 58.3 bits (121), Expect(3) = 4e-015
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 47 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 163
Score = 33.6 bits (67), Expect(3) = 4e-015
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPEMMIEPAIRGT 464
S EA +GC GVFH A+P+ D + I+ T
Sbjct: 248 SFNEAIAGCTGVFHVATPMDFDSQNPENEVIKPT 349
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 156 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 61
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 300 GVATWKTPVQPAMASLKL 247
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 295 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 170
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 172 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 68
Score = 27.2 bits (53), Expect(3) = 4e-015
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 377 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 478
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 441 MLTLPAEEVKTMRFTVPASLHAL 373
>gb|BG415963.1|BG415963 HVSMEk0009D15f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009D15f, mRNA sequence
Length = 961
Score = 58.3 bits (121), Expect(3) = 5e-015
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 44 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 160
Score = 33.1 bits (66), Expect(3) = 5e-015
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 245 SFNEAIAGCTGVFHVATPMDFDSQ 316
Score = 32.2 bits (64), Expect(4) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 153 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 58
Score = 29.0 bits (57), Expect(4) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 297 GVATWKTPVQPAMASLKL 244
Score = 28.1 bits (55), Expect(2) = 0.11
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 292 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 167
Score = 27.6 bits (54), Expect(2) = 0.11
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 169 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 65
Score = 27.2 bits (53), Expect(3) = 5e-015
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 374 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 475
Score = 26.7 bits (52), Expect(4) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 438 MLTLPAEEVKTMRFTVPASLHAL 370
Score = 24.0 bits (46), Expect(4) = 3e-006
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 871 WGASYTRTCASAT 833
WG+SY+ TC A+
Sbjct: 874 WGSSYSGTCPEAS 836
>gb|AV924570.1|AV924570 AV924570 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16b10 5', mRNA sequence
Length = 611
Score = 82.6 bits (174), Expect = 5e-015
Identities = 35/73 (47%), Positives = 49/73 (67%)
Frame = +3 / +2
Query: 390 DGVFHAASPVTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKP 569
+G A P+ + ++ A+ GTR V+ AA DAGV+RVVFTSS G V+M+P R+
Sbjct: 392 EGSRRANYPMFNTDPELMVVAVEGTRNVIHAAVDAGVRRVVFTSSYGAVHMDPNRNLDAV 571
Query: 570 VDDTCWSDLEYCK 608
+D+TCWSD E+CK
Sbjct: 572 LDETCWSDYEFCK 610
Score = 52.8 bits (109), Expect = 4e-006
Identities = 30/50 (60%), Positives = 33/50 (66%)
Frame = -2 / -3
Query: 607 LQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
LQ S SLQ VSS+ R G M T P E+VNTTR TPAS+AA IT VP
Sbjct: 609 LQNS*SLQHVSSSTASRFRLGSMCTAP*EEVNTTRRTPASTAAWITFLVP 460
>gb|BG418507.1|BG418507 HVSMEk0022O17f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022O17f, mRNA sequence
Length = 494
Score = 58.3 bits (121), Expect(3) = 5e-015
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 47 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 163
Score = 33.1 bits (66), Expect(3) = 5e-015
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 248 SFNEAIAGCTGVFHVATPMDFDSQ 319
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 156 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 61
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 300 GVATWKTPVQPAMASLKL 247
Score = 28.1 bits (55), Expect(2) = 0.51
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 295 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 170
Score = 27.2 bits (53), Expect(3) = 5e-015
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 377 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 478
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 441 MLTLPAEEVKTMRFTVPASLHAL 373
Score = 25.4 bits (49), Expect(2) = 0.51
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV + D V L+E DEP E SGH
Sbjct: 172 LLDVGRVANGCPDGVPGLEELHDEPRPYETRRSGH 68
>gb|BM374136.2|BM374136 EBma03_SQ003_M01_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_M01 5', mRNA sequence
Length = 468
Score = 58.3 bits (121), Expect(3) = 5e-015
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 9 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 125
Score = 33.1 bits (66), Expect(3) = 5e-015
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 210 SFNEAIAGCTGVFHVATPMDFDSQ 281
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 118 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 23
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 262 GVATWKTPVQPAMASLKL 209
Score = 28.1 bits (55), Expect(2) = 0.12
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 257 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 132
Score = 27.6 bits (54), Expect(2) = 0.12
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 134 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 30
Score = 27.2 bits (53), Expect(3) = 5e-015
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+VFTSS G+V + P+ D+
Sbjct: 339 ACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDN 440
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -3
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 403 MLTLPAEEVKTMRFTVPASLHAL 335
>gb|BM099821.2|BM099821 EBes01_SQ004_F24_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_F24 5', mRNA sequence
Length = 432
Score = 58.3 bits (121), Expect(3) = 9e-015
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 38 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 154
Score = 33.1 bits (66), Expect(3) = 9e-015
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 239 SFNEAIAGCTGVFHVATPMDFDSQ 310
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 147 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 52
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 291 GVATWKTPVQPAMASLKL 238
Score = 28.1 bits (55), Expect(2) = 0.12
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 286 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 161
Score = 27.6 bits (54), Expect(2) = 0.12
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 163 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 59
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 432 MLTLPAEEVKTMRFTVPASLHAL 364
Score = 26.3 bits (51), Expect(3) = 9e-015
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTV 536
A + VKR+VFTSS G+V
Sbjct: 368 ACKEAGTVKRIVFTSSAGSV 427
>gb|BI776379.2|BI776379 EBpi05_SQ001_B03_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_B03 5', mRNA sequence
Length = 426
Score = 58.3 bits (121), Expect(3) = 9e-015
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 32 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 148
Score = 33.1 bits (66), Expect(3) = 9e-015
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 233 SFNEAIAGCTGVFHVATPMDFDSQ 304
Score = 32.2 bits (64), Expect(3) = 3e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 141 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 46
Score = 29.0 bits (57), Expect(3) = 3e-006
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 285 GVATWKTPVQPAMASLKL 232
Score = 28.1 bits (55), Expect(2) = 0.12
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 280 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 155
Score = 27.6 bits (54), Expect(2) = 0.12
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 157 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 53
Score = 26.7 bits (52), Expect(3) = 3e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 426 MLTLPAEEVKTMRFTVPASLHAL 358
Score = 26.3 bits (51), Expect(3) = 9e-015
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTV 536
A + VKR+VFTSS G+V
Sbjct: 362 ACKEAGTVKRIVFTSSAGSV 421
>gb|BF626636.3|BF626636 HVSMEa0018P10f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018P10f, mRNA sequence
Length = 753
Score = 80.8 bits (170), Expect = 2e-014
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = +3 / +2
Query: 438 MIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNT 614
++ A+ GTR V+ A DAGV+RV FTSS G V+M+P R P VD CWSD +YCK T
Sbjct: 200 LLPQAVDGTRNVINPAADAGVRRVAFTSSYGAVHMDPTRIPDAVVDQACWSDYDYCKQT 376
Score = 52.4 bits (108), Expect(2) = 1e-014
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = -2 / -1
Query: 613 VFLQYSRSLQQVSSTGLLGSR*GFMYTVPMEDVNTTRFTPASSAAAIT*RVP 458
V LQ S SLQQ ST G R G M T P E+VN TR TPAS+A IT VP
Sbjct: 375 VCLQ*S*SLQQAWSTTASGIRVGSMCTAP*EEVNATRRTPASAAGLITFLVP 220
Score = 47.8 bits (98), Expect(2) = 1e-014
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = -1 / -3
Query: 446 LDHHLRVIGDRGGGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVP 267
L + V+ DRGG VE A A E +A+ VQ GA + E + GAV+ QV VL + +P
Sbjct: 211 LRQEVGVVEDRGGDVEHAPPAPEPGAEAVGVQDEGAAQGEPLPGAVQLQQVCVLTVRGIP 32
Score = 35.4 bits (71), Expect = 0.78
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3 / +2
Query: 378 FSGCDGVFHAASPVTDDPEMMIEPAIRGTRYVMAAAD 488
F G GVFH ASPV +DP+++ + + AAD
Sbjct: 143 FRGWRGVFHVASPVFNDPDLLPQAVDGTRNVINPAAD 253
>gb|BF259291.3|BF259291 HVSMEf0018M18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0018M18f, mRNA sequence
Length = 721
Score = 54.7 bits (113), Expect(3) = 2e-014
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+S G VCVTG +IA LV LL +GYTVR TVR+ DPK
Sbjct: 60 MSYWMGNVVCVTGTSSYIAC*LV*LLLHRGYTVRATVRDTADPK 191
Score = 37.3 bits (75), Expect(2) = 5e-004
Identities = 21/40 (52%), Positives = 22/40 (55%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
F GS TV RTV P RR TSQ+AM PVT T P
Sbjct: 193 FLGSAVSRTVARTVYPRWRRS*TSQQAM*LEVPVTHTTFP 74
Score = 36.8 bits (74), Expect(3) = 2e-014
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3 / +3
Query: 423 DDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDDTCW 587
D +++PA+ GT V+ + A +KRV+ TSS+ V + V D W
Sbjct: 342 DPKAELLDPAVNGTLNVLRSCKKASIKRVIVTSSMAAVAYSGKPRTPDVVVDETW 506
Score = 26.7 bits (52), Expect(2) = 5e-004
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKT SQP A++++
Sbjct: 322 GVAVWKTQSQPSMAASKV 269
Score = 25.4 bits (49), Expect(3) = 2e-014
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +3 / +3
Query: 285 KNDHLRALDGXXXXXXXXXXXXXXPQSLAEAFSGCDGVFHAASPV 419
K HL+AL G + A G D VFH A+P+
Sbjct: 192 KTLHLQAL*GAAERLHLFRASLLEEGTFDAAIDG*DCVFHTATPL 326
>gb|CA002529.1|CA002529 HS07M14r HS Hordeum vulgare subsp. vulgare cDNA clone HS07M14
5-PRIME, mRNA sequence
Length = 388
Score = 80.8 bits (170), Expect = 2e-014
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 197 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEG 331
Score = 45.5 bits (93), Expect = 7e-004
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 309 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 196
Score = 43.7 bits (89), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = -1 / -1
Query: 368 KALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSG 189
+A+ V+ VGA E + ++G QV VL + + ++D VA +E L PG +E S +
Sbjct: 385 EAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGGSSDAVAAEEELLHHPGADEASRTR 206
Query: 188 HAN 180
HA+
Sbjct: 205 HAD 197
>gb|CA002850.1|CA002850 HS08L10r HS Hordeum vulgare subsp. vulgare cDNA clone HS08L10
5-PRIME, mRNA sequence
Length = 403
Score = 80.8 bits (170), Expect = 2e-014
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3 / +2
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 212 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEG 346
Score = 45.5 bits (93), Expect = 7e-004
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 324 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 211
Score = 43.7 bits (89), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = -1 / -1
Query: 368 KALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSG 189
+A+ V+ VGA E + ++G QV VL + + ++D VA +E L PG +E S +
Sbjct: 400 EAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGGSSDAVAAEEELLHHPGADEASRTR 221
Query: 188 HAN 180
HA+
Sbjct: 220 HAD 212
>gb|CA002883.1|CA002883 HS08M20r HS Hordeum vulgare subsp. vulgare cDNA clone HS08M20
5-PRIME, mRNA sequence
Length = 396
Score = 80.8 bits (170), Expect = 2e-014
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3 / +3
Query: 180 VCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKNDHLRALDG 314
VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL AL+G
Sbjct: 204 VCVTGAGGFIGSWVVKELLLRGYRVRGTARDPADRKNAHLLALEG 338
Score = 45.5 bits (93), Expect = 7e-004
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 292 SFFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
+F S G VP T *P R T+QE M PPAPVTQT
Sbjct: 316 AFLRSAGSRAVPLTR*PRRRSSFTTQEPMKPPAPVTQT 203
Score = 43.7 bits (89), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = -1 / -2
Query: 368 KALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSG 189
+A+ V+ VGA E + ++G QV VL + + ++D VA +E L PG +E S +
Sbjct: 392 EAIVVEDVGAAHCEPLLRPLQGQQVRVLAVSGISGGSSDAVAAEEELLHHPGADEASRTR 213
Query: 188 HAN 180
HA+
Sbjct: 212 HAD 204
>gb|CK123698.1|CK123698 BES1824105b24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B245 5-PRIME, mRNA sequence
Length = 408
Score = 79.9 bits (168), Expect(2) = 2e-014
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 97 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 228
Score = 56.1 bits (116), Expect(2) = 3e-010
Identities = 28/43 (65%), Positives = 28/43 (65%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 230 FLGSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 102
Score = 39.6 bits (80), Expect = 0.045
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP GLH PRH
Sbjct: 144 LHRLLARQAPPPPGLHRPRH 203
Score = 38.2 bits (77), Expect(2) = 0.003
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 228 LGVGGVPDGGADGVAPVEEELDEPGGDVARGAGDAH 121
Score = 29.5 bits (58), Expect(2) = 3e-010
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 404 VEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQV 294
VED V AG+G ++ + QQ E+ + + G+ +G QV
Sbjct: 348 VEDTVAAGDGSIESAFFQQACFEQVQPLLGSFQGLQV 238
Score = 23.1 bits (44), Expect(2) = 0.003
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2 / -2
Query: 412 EAAWKTPSQPEKASARL 362
+ WKT SQP A++++
Sbjct: 356 KXVWKTQSQPAMAASKV 306
Score = 21.7 bits (41), Expect(2) = 2e-014
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3 / +1
Query: 375 AFSGCDGVFH 404
A +GCD VFH
Sbjct: 319 AIAGCDCVFH 348
>gb|BG414602.1|BG414602 HVSMEk0003A18f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003A18f, mRNA sequence
Length = 900
Score = 58.3 bits (121), Expect(3) = 3e-014
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 43 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 159
Score = 33.1 bits (66), Expect(3) = 3e-014
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 244 SFNEAIAGCTGVFHVATPMDFDSQ 315
Score = 32.2 bits (64), Expect(3) = 2e-006
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -2
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 152 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 57
Score = 29.9 bits (59), Expect(3) = 2e-006
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -1 / -1
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q++ L
Sbjct: 291 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQLLCL 166
Score = 29.0 bits (57), Expect(2) = 0.061
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 296 GVATWKTPVQPAMASLKL 243
Score = 27.6 bits (54), Expect(2) = 0.061
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -1
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 168 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 64
Score = 26.7 bits (52), Expect(3) = 2e-006
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2 / -2
Query: 541 MYTVPMEDVNTTRFTPASSAAAI 473
M T+P E+V T RFT +S A+
Sbjct: 437 MLTLPAEEVKTMRFTVPASLHAL 369
Score = 24.4 bits (47), Expect(3) = 3e-014
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIGTVYMNPYRDPSKPVDD 578
A + VKR+V TSS G+V + P+ D+
Sbjct: 373 ACKEAGTVKRIVLTSSAGSVNIEERPRPAYDQDN 474
>gb|BM099969.2|BM099969 EBes01_SQ004_M17_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ004_M17 5', mRNA sequence
Length = 438
Score = 58.3 bits (121), Expect(3) = 3e-014
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +3
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 45 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 161
Score = 33.1 bits (66), Expect(3) = 3e-014
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 246 SFNEAIAGCTGVFHVATPMDFDSQ 317
Score = 32.2 bits (64), Expect(2) = 0.003
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -3
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 154 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 59
Score = 29.0 bits (57), Expect(2) = 0.003
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 298 GVATWKTPVQPAMASLKL 245
Score = 28.1 bits (55), Expect(2) = 0.12
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -2
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 293 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 168
Score = 27.6 bits (54), Expect(2) = 0.12
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -2
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 170 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 66
Score = 24.4 bits (47), Expect(3) = 3e-014
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3 / +3
Query: 477 AAADDAGVKRVVFTSSIGTV 536
A + KR+VFTSS G+V
Sbjct: 375 ACKEAGTAKRIVFTSSAGSV 434
>gb|CA030421.1|CA030421 HX07A07r HX Hordeum vulgare subsp. vulgare cDNA clone HX07A07
5-PRIME, mRNA sequence
Length = 436
Score = 52.8 bits (109), Expect(3) = 3e-014
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +3 / +2
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
GQG TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 35 GQGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 151
Score = 42.8 bits (87), Expect(2) = 6e-007
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = -2 / -2
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCP 164
S+G T T *P +RRR T E M P APVT TV P P
Sbjct: 150 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSPWP 34
Score = 31.8 bits (63), Expect(3) = 3e-014
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 308 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 415
Score = 31.3 bits (62), Expect(3) = 3e-014
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 239 AMLAAARGCSGVFHLASPCTVD 304
Score = 31.3 bits (62), Expect(2) = 6e-007
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA WKTP QP A++
Sbjct: 297 VQGEARWKTPEQPRAAAS 244
>gb|BF262808.2|BF262808 HV_CEa0005A08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0005A08f, mRNA sequence
Length = 819
Score = 79.9 bits (168), Expect = 3e-014
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +3
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 27 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTADPK 158
Score = 53.3 bits (110), Expect = 3e-006
Identities = 27/41 (65%), Positives = 27/41 (65%)
Frame = -2 / -3
Query: 283 GSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
GS TV RTV*P RR LTSQEAM P APVT T P PE
Sbjct: 154 GSAVSRTVARTV*PRWRRSLTSQEAM*PEAPVTHTTFPIPE 32
Score = 40.0 bits (81), Expect = 0.033
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = -1 / -2
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA ++E LDEPGG+ +G A+
Sbjct: 158 LGVGGVPDGGADSVAAVEEELDEPGGDVARGAGDAH 51
Score = 35.9 bits (72), Expect = 0.57
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLARQAPP LH PRH
Sbjct: 74 LHRLLARQAPPPPRLHCPRH 133
>gb|BU980172.1|BU980172 HA18O07r HA Hordeum vulgare subsp. vulgare cDNA clone HA18O07
5-PRIME, mRNA sequence
Length = 440
Score = 58.3 bits (121), Expect(3) = 4e-014
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +3 / +1
Query: 165 GQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
G V VTGA GF+ SWLV +LL+ GYTVR TVR+P +
Sbjct: 55 GNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVRDPAN 171
Score = 33.1 bits (66), Expect(3) = 4e-014
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3 / +1
Query: 363 SLAEAFSGCDGVFHAASPVTDDPE 434
S EA +GC GVFH A+P+ D +
Sbjct: 256 SFNEAIAGCTGVFHVATPMDFDSQ 327
Score = 32.2 bits (64), Expect(2) = 0.003
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -2 / -1
Query: 274 GFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQT 179
G TV RTV P R +TS + P APVT T
Sbjct: 164 GSRTVARTVYPAWRSFMTSHDPTKPDAPVTTT 69
Score = 29.0 bits (57), Expect(2) = 0.003
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 415 GEAAWKTPSQPEKASARL 362
G A WKTP QP AS +L
Sbjct: 308 GVATWKTPVQPAMASLKL 255
Score = 28.1 bits (55), Expect(2) = 0.12
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1 / -3
Query: 410 GGVEDAVTAGEGLGKALWVQQVGAEEDETVDGAVKGPQVVVL 285
G VEDA A +GL +A + QVG + + + G+ K Q + L
Sbjct: 303 GDVEDAGAARDGLVEAAILAQVGLPDGQPLLGSGKLQQWLCL 178
Score = 27.6 bits (54), Expect(2) = 0.12
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -1 / -3
Query: 290 VLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGH 186
+L + RV D D V L+E DEP E SGH
Sbjct: 180 LLDVGRVADGCPDGVPGLEELHDEPRPYETRRSGH 76
Score = 24.0 bits (46), Expect(3) = 4e-014
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / +1
Query: 477 AAADDAGVKRVVFTSSIG 530
A + VKR+VFTSS G
Sbjct: 385 ACKEAGTVKRIVFTSSAG 438
>gb|AL508824.1|AL508824 AL508824 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09O15V 5',
mRNA sequence
Length = 598
Score = 60.6 bits (126), Expect(2) = 5e-014
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS LVK LLEKGY V+ TVRNP D
Sbjct: 89 KTACVTGGSGYIASALVKMLLEKGYAVKTTVRNPDD 196
Score = 41.4 bits (84), Expect(2) = 3e-007
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS LT +AM P PVT V
Sbjct: 204 FSPSSGFLTVVFTA*PFSSSILTRADAMYPLPPVTHAV 91
Score = 40.5 bits (82), Expect(2) = 5e-014
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3 / +2
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQN 620
VKRVV TSS + P +D+ WSD+EY + T++
Sbjct: 428 VKRVVLTSSTAAISSRPLEGDGHVLDEDSWSDVEYLRATKS 550
Score = 34.5 bits (69), Expect = 1.5
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 293 VVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHA 183
V+L + VPDR VALLQ+ LDE + P+ SG A
Sbjct: 208 VLLPVIGVPDRRLHGVALLQQHLDESRRDVPAPSGDA 98
Score = 33.6 bits (67), Expect(2) = 3e-007
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1 / -1
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEE 333
G R G E VTAG+G+ +A QVGAE+
Sbjct: 337 GHRSGDEEGVVTAGDGVVEAALFVQVGAED 248
>gb|BE519901.1|BE519901 HV_CEb0021K08f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021K08f, mRNA sequence
Length = 721
Score = 60.6 bits (126), Expect(2) = 6e-014
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS LVK LLEKGY V+ TVRNP D
Sbjct: 101 KTACVTGGSGYIASALVKMLLEKGYAVKTTVRNPDD 208
Score = 41.4 bits (84), Expect(2) = 1e-006
Identities = 21/38 (55%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS LT +AM P PVT V
Sbjct: 216 FSPSSGFLTVVFTA*PFSSSILTRADAMYPLPPVTHAV 103
Score = 40.5 bits (82), Expect(2) = 6e-014
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3 / +2
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKNTQN 620
VKRVV TSS + P +D+ WSD+EY + T++
Sbjct: 440 VKRVVLTSSTAAISSRPLEGDGHVLDEDSWSDVEYLRATKS 562
Score = 34.5 bits (69), Expect = 1.5
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 293 VVLWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHA 183
V+L + VPDR VALLQ+ LDE + P+ SG A
Sbjct: 220 VLLPVIGVPDRRLHGVALLQQHLDESRRDVPAPSGDA 110
Score = 31.3 bits (62), Expect(2) = 1e-006
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1 / -1
Query: 422 GDRGGGVEDAVTAGEGLGKALWVQQVGAEE 333
G R G E V AG+G+ +A QVGAE+
Sbjct: 349 GHRSGDEEGVVAAGDGVVEAALFVQVGAED 260
>gb|BF258617.2|BF258617 HVSMEf0016D02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016D02f, mRNA sequence
Length = 600
Score = 78.5 bits (165), Expect = 8e-014
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G+IASWLVK LL +GYTVR TVR+ DPK
Sbjct: 53 MSSGMGKVVCVTGASGYIASWLVKLLLHRGYTVRATVRDTDDPK 184
Score = 51.5 bits (106), Expect = 1e-005
Identities = 26/43 (60%), Positives = 27/43 (62%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS+ TV RTV P R LTSQEAM P APVT T P PE
Sbjct: 186 FLGSSVSRTVARTVYPRWSRSLTSQEAM*PEAPVTHTTFPIPE 58
Score = 35.0 bits (70), Expect = 1.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1 / -3
Query: 272 VPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
VPD AD V +++ LDEPGG+ +G A+
Sbjct: 169 VPDGGADGVPAVEQELDEPGGDVARGAGDAH 77
>gb|BU972166.1|BU972166 HB20N02r BC Hordeum vulgare subsp. vulgare cDNA clone HB20N02
5-PRIME, mRNA sequence
Length = 213
Score = 78.0 bits (164), Expect = 1e-013
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +3 / +1
Query: 156 LSSGQGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPK 287
+SSG G+ VCVTGA G++ASWLVK LL +GYTVR TVR+ DPK
Sbjct: 43 MSSGXGKVVCVTGASGYMASWLVKLLLHRGYTVRATVRDTADPK 174
Score = 53.3 bits (110), Expect = 3e-006
Identities = 27/43 (62%), Positives = 27/43 (62%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRPCPE 161
F GS TV RTV*P RR TSQEAM P APVT T P PE
Sbjct: 176 FLGSAVSRTVARTV*PRWRRSXTSQEAM*PEAPVTHTTFPXPE 48
Score = 33.1 bits (66), Expect = 3.8
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 203 VHCLLARQAPPGEGLHSPRH 262
+H LLAR AP GLH PRH
Sbjct: 90 LHGLLARXAPSPPGLHRPRH 149
Score = 33.1 bits (66), Expect = 3.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1 / -1
Query: 287 LWIHRVPDRAADCVALLQEALDEPGGNEPSSSGHAN 180
L + VPD AD VA +++ L EPGG+ +G A+
Sbjct: 174 LGVGGVPDGGADGVAPVEKELXEPGGHVARGAGDAH 67
>gb|BJ469082.1|BJ469082 BJ469082 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13a15 5', mRNA sequence
Length = 554
Score = 44.6 bits (91), Expect(3) = 2e-013
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3 / +3
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N +T + + G T N V VRDVA+A + +Y RYIC+E + DL
Sbjct: 342 NITTKFLRYIIKGGPDTINNKFWPIVDVRDVADALLLLYNKAKPCQRYICSEHQIDIKDL 521
Query: 924 CRVLAKLFPEY 956
++ ++P Y
Sbjct: 522 VDLMKSMYPSY 554
Score = 36.8 bits (74), Expect(3) = 2e-013
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3 / +3
Query: 240 KGYTVRGTVRNPVDPKNDHLRALD 311
+GY V TVR+P DPKN L+ LD
Sbjct: 6 RGYAVNATVRDPCDPKNACLKQLD 77
Score = 36.3 bits (73), Expect(3) = 2e-013
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / +3
Query: 366 LAEAFSGCDGVFHAASPVTDD 428
+A AF GC+GVFH ASPV D
Sbjct: 132 VATAFVGCEGVFHLASPVPID 194
Score = 32.2 bits (64), Expect = 7.2
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 418 TGEAAWKTPSQPEKASARL 362
TGEA WKTPS P A A +
Sbjct: 184 TGEARWKTPSHPTNAVATM 128
>gb|BF264429.3|BF264429 HV_CEa0009G11f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009G11f, mRNA sequence
Length = 802
Score = 54.2 bits (112), Expect(3) = 3e-013
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGY 248
+TVCVTGAGGFIASWLVK LL KG+
Sbjct: 104 KTVCVTGAGGFIASWLVKLLLSKGH 178
Score = 42.3 bits (86), Expect = 0.007
Identities = 17/23 (73%), Positives = 17/23 (73%)
Frame = -2 / -2
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RR LTS EAM PPAPVT TV
Sbjct: 174 PLERRSLTSHEAMKPPAPVTHTV 106
Score = 32.7 bits (65), Expect(3) = 3e-013
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3 / +2
Query: 246 YTVRGTVRNPVDPKNDHLR 302
YTVRGTVR+P KN HL+
Sbjct: 179 YTVRGTVRDPGYAKNAHLK 235
Score = 25.8 bits (50), Expect(3) = 3e-013
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPV 419
S+A + +GCDGV A+ PV
Sbjct: 296 SIACSVAGCDGVMPASVPV 352
>gb|CV059539.1|CV059539 BNEL49c1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL49c1 5' similar to putative
cinnamoyl-CoA reductase, mRNA sequence
Length = 499
Score = 48.3 bits (99), Expect(3) = 3e-013
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3 / +3
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+G TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 96 KGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 209
Score = 40.5 bits (82), Expect(2) = 3e-006
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
S+G T T *P +RRR T E M P APVT TV P
Sbjct: 208 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSP 98
Score = 33.1 bits (66), Expect(3) = 3e-013
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3 / +3
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSSIG 530
V D + ++ PA+ GT V+ AA DAG R V + +G
Sbjct: 366 VLDPQKELVVPAVEGTLNVLRAAKDAGGVRRVVVTLVG 479
Score = 31.3 bits (62), Expect(3) = 3e-013
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +3
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 297 AMLAAARGCSGVFHLASPCTVD 362
Score = 31.3 bits (62), Expect(2) = 3e-006
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA WKTP QP A++
Sbjct: 355 VQGEARWKTPEQPRAAAS 302
>gb|BI956550.1|BI956550 HVSMEn0004B16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004B16f, mRNA sequence
Length = 890
Score = 41.4 bits (84), Expect(3) = 3e-013
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / +1
Query: 177 TVCVTGAGGFIASWLVKRLLEKGY 248
TVCVTGAGGFIA W + LL KG+
Sbjct: 127 TVCVTGAGGFIAWWGGELLLSKGH 198
Score = 39.6 bits (80), Expect(3) = 3e-013
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +3 / +1
Query: 246 YTVRGTVRNPVDPKNDHLRALDG 314
YTVRGTVR P + KN HL+AL G
Sbjct: 199 YTVRGTVRYPGNAKNAHLKALQG 267
Score = 33.1 bits (66), Expect(3) = 1e-005
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2 / -1
Query: 244 PFSRRRLTSQEAMNPPAPVTQTV 176
P RR +AM PPAPVT TV
Sbjct: 194 PLERRSSPPHQAMKPPAPVTHTV 126
Score = 31.3 bits (62), Expect(3) = 3e-013
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPV 419
+L A +GCDG H ASPV
Sbjct: 317 ALPSAVAGCDGALHVASPV 373
Score = 26.7 bits (52), Expect(3) = 1e-005
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / -3
Query: 418 TGEAAWKTPSQPEKASAR 365
TG A W+ PSQP A +
Sbjct: 372 TGLATWRAPSQPATADGK 319
Score = 25.8 bits (50), Expect(3) = 1e-005
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -1 / -3
Query: 371 GKALWVQQVGAEEDETVDGAVKGPQVVVLWIHRVPDRAADCVALLQE 231
GKA+ VQQVG ++ + + ++ +L I + AAD V L E
Sbjct: 324 GKAVVVQQVGVKQLQPFPSTL*CLKMSILSITGISHGAADRVVALGE 184
>gb|CA028522.1|CA028522 HZ62E15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62E15
5-PRIME, mRNA sequence
Length = 525
Score = 59.7 bits (124), Expect(2) = 7e-013
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS L+K LLEKGY V+ TVRNP D
Sbjct: 72 KTACVTGGSGYIASALIKLLLEKGYAVKTTVRNPDD 179
Score = 42.3 bits (86), Expect = 0.007
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -3
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS L S EAM P PVT V
Sbjct: 187 FSMSSGFLTVVLTA*PFSSSSLMSAEAM*PLPPVTHAV 74
Score = 37.3 bits (75), Expect(2) = 7e-013
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +3
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCK 608
VKRV+ TSS V P + +D++ WSD+EY +
Sbjct: 414 VKRVILTSSNAGVSRRPLQGGGHVLDESSWSDVEYLR 524
>gb|BG300073.1|BG300073 HVSMEb0011F07f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011F07f, mRNA sequence
Length = 522
Score = 48.3 bits (99), Expect(3) = 9e-013
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +3 / +2
Query: 168 QGRTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+G TV VTGA GFI S V+ LL +GY+V V NP D
Sbjct: 80 KGETVLVTGASGFIGSVTVRLLLARGYSVHAAVLNPDD 193
Score = 40.5 bits (82), Expect(2) = 3e-006
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2 / -1
Query: 280 STGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTVRP 170
S+G T T *P +RRR T E M P APVT TV P
Sbjct: 192 SSGLRTAAWTE*PRARRRRTVTEPMKPLAPVTSTVSP 82
Score = 31.3 bits (62), Expect(3) = 9e-013
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3 / +2
Query: 417 VTDDPEMMIEPAIRGTRYVMAAADDAGVKRVVFTSS 524
V D + ++ PA+ GT V+ AA DAG R V +S
Sbjct: 350 VLDPHKELVVPAVEGTLNVLRAAKDAGGVRRVVVTS 457
Score = 31.3 bits (62), Expect(3) = 9e-013
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3 / +2
Query: 363 SLAEAFSGCDGVFHAASPVTDD 428
++ A GC GVFH ASP T D
Sbjct: 281 AMLAAARGCSGVFHLASPCTVD 346
Score = 31.3 bits (62), Expect(2) = 3e-006
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 421 VTGEAAWKTPSQPEKASA 368
V GEA WKTP QP A++
Sbjct: 339 VQGEARWKTPEQPRAAAS 286
Score = 30.4 bits (60), Expect(2) = 7.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3 / +2
Query: 477 AAADDAGVKRVVFTSSIGTVYMNP 548
AA D GV+RVV TSS+ V +P
Sbjct: 413 AAKDAGGVRRVVVTSSVSAVVPSP 484
Score = 21.7 bits (41), Expect(2) = 7.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2 / +1
Query: 200 RVHCLLARQAPPGEGLHSPRHGQEP 274
R+H L R PP L PR +P
Sbjct: 112 RLHRLRDRAPPPRPRLLRPRRRPQP 186
>gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd27a15, mRNA
sequence
Length = 735
Score = 54.2 bits (112), Expect(2) = 1e-012
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +3 / -1
Query: 744 NASTDHVMKYLTGSATTYVNAAQAYVHVRDVAEAHVRVYEAPHAHGRYICAESTLHRGDL 923
N +++ ++ + G + V VRDVA+A + VYE P + GRYICA + + +
Sbjct: 609 NTTSELLLYVIKGGPNVLNDMLWHIVDVRDVADALLLVYEKPESSGRYICAPNYISTNAM 430
Query: 924 CRVLAKLFPEY 956
+L K +P+Y
Sbjct: 429 LELLKKTYPDY 397
Score = 39.6 bits (80), Expect(2) = 1e-012
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +3 / -1
Query: 621 WYCYAKTVAEQGAWEVARK 677
WYC AKTVAEQ WE A K
Sbjct: 732 WYCLAKTVAEQTVWEYAEK 676
>gb|AL507080.1|AL507080 AL507080 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY05E15T 5',
mRNA sequence
Length = 697
Score = 59.7 bits (124), Expect(2) = 1e-012
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS L+K LLEKGY V+ TVRNP D
Sbjct: 65 KTACVTGGSGYIASALIKLLLEKGYAVKTTVRNPDD 172
Score = 42.3 bits (86), Expect = 0.007
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS L S EAM P PVT V
Sbjct: 180 FSMSSGFLTVVLTA*PFSSSSLMSAEAM*PLPPVTHAV 67
Score = 37.3 bits (75), Expect(2) = 1e-012
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3 / +2
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCK 608
VKRV+ TSS V P + +D++ WSD+EY +
Sbjct: 407 VKRVILTSSNAGVSRRPLQGGGHVLDESSWSDVEYLR 517
>gb|CA024529.1|CA024529 HZ49J01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49J01
5-PRIME, mRNA sequence
Length = 526
Score = 59.7 bits (124), Expect(2) = 1e-012
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS L+K LLEKGY V+ TVRNP D
Sbjct: 75 KTACVTGGSGYIASALIKLLLEKGYAVKTTVRNPDD 182
Score = 42.3 bits (86), Expect = 0.007
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS L S EAM P PVT V
Sbjct: 190 FSMSSGFLTVVLTA*PFSSSSLMSAEAM*PLPPVTHAV 77
Score = 36.8 bits (74), Expect(2) = 1e-012
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3 / +3
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
VKRV+ TSS V P + +D++ WSD+EY
Sbjct: 417 VKRVILTSSNAGVSRRPLQGGGHVLDESSWSDVEY 521
>gb|CA025466.1|CA025466 HZ52D24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52D24
5-PRIME, mRNA sequence
Length = 526
Score = 59.7 bits (124), Expect(2) = 1e-012
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS L+K LLEKGY V+ TVRNP D
Sbjct: 75 KTACVTGGSGYIASALIKLLLEKGYAVKTTVRNPDD 182
Score = 42.3 bits (86), Expect = 0.007
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS L S EAM P PVT V
Sbjct: 190 FSMSSGFLTVVLTA*PFSSSSLMSAEAM*PLPPVTHAV 77
Score = 36.8 bits (74), Expect(2) = 1e-012
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3 / +3
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
VKRV+ TSS V P + +D++ WSD+EY
Sbjct: 417 VKRVILTSSNAGVSRRPLQGGGHVLDESSWSDVEY 521
>gb|CA021688.1|CA021688 HZ40M24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40M24
5-PRIME, mRNA sequence
Length = 528
Score = 59.7 bits (124), Expect(2) = 1e-012
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS L+K LLEKGY V+ TVRNP D
Sbjct: 79 KTACVTGGSGYIASALIKLLLEKGYAVKTTVRNPDD 186
Score = 42.3 bits (86), Expect = 0.007
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -2
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS L S EAM P PVT V
Sbjct: 194 FSMSSGFLTVVLTA*PFSSSSLMSAEAM*PLPPVTHAV 81
Score = 36.8 bits (74), Expect(2) = 1e-012
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3 / +1
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
VKRV+ TSS V P + +D++ WSD+EY
Sbjct: 421 VKRVILTSSNAGVSRRPLQGGGHVLDESSWSDVEY 525
>gb|CA026014.1|CA026014 HZ53N10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53N10
5-PRIME, mRNA sequence
Length = 528
Score = 59.7 bits (124), Expect(2) = 1e-012
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS L+K LLEKGY V+ TVRNP D
Sbjct: 77 KTACVTGGSGYIASALIKLLLEKGYAVKTTVRNPDD 184
Score = 42.3 bits (86), Expect = 0.007
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS L S EAM P PVT V
Sbjct: 192 FSMSSGFLTVVLTA*PFSSSSLMSAEAM*PLPPVTHAV 79
Score = 36.8 bits (74), Expect(2) = 1e-012
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3 / +2
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
VKRV+ TSS V P + +D++ WSD+EY
Sbjct: 419 VKRVILTSSNAGVSRRPLQGGGHVLDESSWSDVEY 523
>gb|CA022672.1|CA022672 HZ44A09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44A09
5-PRIME, mRNA sequence
Length = 577
Score = 59.7 bits (124), Expect(2) = 1e-012
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVD 281
+T CVTG G+IAS L+K LLEKGY V+ TVRNP D
Sbjct: 126 KTACVTGGSGYIASALIKLLLEKGYAVKTTVRNPDD 233
Score = 42.3 bits (86), Expect = 0.007
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+GFLTV T *PFS L S EAM P PVT V
Sbjct: 241 FSMSSGFLTVVLTA*PFSSSSLMSAEAM*PLPPVTHAV 128
Score = 36.8 bits (74), Expect(2) = 1e-012
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3 / +3
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEY 602
VKRV+ TSS V P + +D++ WSD+EY
Sbjct: 468 VKRVILTSSNAGVSRRPLQGGGHVLDESSWSDVEY 572
>gb|BF065218.2|BF065218 HV_CEb0024E13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024E13f, mRNA sequence
Length = 803
Score = 57.4 bits (119), Expect(2) = 1e-012
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +3 / +1
Query: 174 RTVCVTGAGGFIASWLVKRLLEKGYTVRGTVRNPVDPKND 293
+T CVTG G+IAS LVK LLEKGY V+ TVR P D + +
Sbjct: 88 KTACVTGGSGYIASALVKMLLEKGYAVKTTVRYPDDTEKN 207
Score = 42.3 bits (86), Expect(2) = 3e-005
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -2 / -1
Query: 289 FFGSTGFLTVPRTV*PFSRRRLTSQEAMNPPAPVTQTV 176
F S+G+LTV T *PFS LTS +AM P PVT V
Sbjct: 203 FSVSSGYLTVVLTA*PFSSSILTSADAMYPLPPVTHAV 90
Score = 39.6 bits (80), Expect(2) = 1e-012
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3 / +1
Query: 498 VKRVVFTSSIGTVYMNPYRDPSKPVDDTCWSDLEYCKN 611
VKRVV TSS V P + +D+ WSD+EY ++
Sbjct: 427 VKRVVLTSSAAAVSSRPLQGDGHVLDEESWSDVEYLRS 540
Score = 25.8 bits (50), Expect(2) = 3e-005
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1 / -3
Query: 416 RGGGVEDAVTAGEGLGKALWVQQVGAEE 333
R G E V AG+G +A + +VGA++
Sbjct: 330 RSGDEEGVVAAGDGAVEAALLVEVGAKD 247
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 541,032,568
Number of Sequences: 312970
Number of extensions: 7403547
Number of successful extensions: 64051
Number of sequences better than 10.0: 758
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 18178984515
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)