TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AF332176.2.1
(912 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 286 1e-095
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 286 7e-095
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 224 1e-094
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 255 2e-092
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 287 4e-090
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 212 7e-086
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 286 8e-086
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 288 7e-085
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 209 2e-084
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 297 7e-081
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 272 1e-080
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 267 2e-080
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 286 6e-079
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 212 8e-079
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 212 8e-079
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 207 2e-077
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 140 9e-077
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 203 5e-076
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 214 2e-075
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 199 8e-075
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 279 2e-074
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 277 7e-074
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 273 1e-072
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 165 6e-072
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 266 1e-070
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 218 4e-069
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 260 6e-069
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 254 4e-067
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 171 5e-067
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 143 2e-066
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 158 3e-066
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 164 2e-064
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 246 2e-064
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 245 3e-064
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 218 4e-064
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 212 4e-063
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 241 4e-063
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 197 7e-063
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 158 1e-062
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 156 3e-062
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 238 4e-062
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 216 6e-062
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 154 2e-061
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 218 3e-061
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 215 3e-061
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 234 5e-061
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 231 6e-060
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 158 1e-059
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 229 2e-059
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 130 9e-059
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 208 9e-059
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 178 4e-058
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 139 8e-058
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 222 2e-057
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 221 3e-057
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 218 3e-056
gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike... 117 7e-056
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 217 8e-056
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 216 1e-055
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 214 5e-055
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 213 1e-054
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 179 2e-054
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 212 3e-054
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 211 4e-054
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 129 4e-054
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 209 5e-054
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 123 4e-053
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 205 2e-052
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 163 3e-052
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 204 6e-052
gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedl... 120 1e-051
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 171 3e-051
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 100 4e-051
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 163 8e-051
gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA li... 118 1e-050
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 104 1e-050
gb|CV054086.1|CV054086 BNEL106e9 Barley EST endosperm libra... 100 3e-050
gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow st... 159 4e-050
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 197 7e-050
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 197 9e-050
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 192 3e-048
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 89 6e-048
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 107 1e-047
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 121 2e-047
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 162 2e-047
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 189 2e-047
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 105 5e-047
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 163 5e-047
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 146 6e-047
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 118 3e-046
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 185 4e-046
gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. v... 120 4e-046
gb|CA017263.1|CA017263 HV14A15u HV Hordeum vulgare subsp. v... 103 5e-046
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 179 1e-045
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 162 2e-045
gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgar... 104 3e-045
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 121 4e-045
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 121 4e-045
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 121 1e-043
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 174 5e-043
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 162 4e-042
gb|CA019796.1|CA019796 HV13D05r HV Hordeum vulgare subsp. v... 170 1e-041
gb|BM101447.2|BM101447 EBpi01_SQ003_O01_R pistil, 1 DPA, no... 101 1e-040
gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. v... 165 4e-040
gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. v... 142 5e-040
gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. v... 76 1e-039
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 89 1e-039
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 163 1e-039
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 163 1e-039
gb|CB880652.1|CB880652 HM07E17w HM Hordeum vulgare subsp. v... 114 3e-039
gb|CB881234.1|CB881234 HM09C23w HM Hordeum vulgare subsp. v... 114 3e-039
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 148 6e-038
gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachi... 157 7e-038
gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DA... 111 1e-037
gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow st... 100 1e-037
gb|CA018998.1|CA018998 HV10G08r HV Hordeum vulgare subsp. v... 92 2e-036
gb|CV061235.1|CV061235 BNEL66d9 Barley EST endosperm librar... 102 2e-036
gb|CB882255.1|CB882255 HL01F14w HL Hordeum vulgare subsp. v... 149 2e-035
gb|BF257559.2|BF257559 HVSMEf0013D22f Hordeum vulgare seedl... 94 3e-035
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 148 5e-035
gb|BI957249.1|BI957249 HVSMEn0008G13f Hordeum vulgare rachi... 147 7e-035
gb|CA004554.1|CA004554 HS17P08r HS Hordeum vulgare subsp. v... 147 7e-035
gb|BQ665573.1|BQ665573 HX04D14u HX Hordeum vulgare subsp. v... 142 2e-033
gb|BU986289.1|BU986289 HF11E17r HF Hordeum vulgare subsp. v... 114 3e-033
gb|BI958556.1|BI958556 HVSMEn0015J19f Hordeum vulgare rachi... 86 2e-032
gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachi... 139 2e-032
gb|AJ436682.1|AJ436682 AJ436682 S00002 Hordeum vulgare subs... 110 3e-032
gb|AJ463502.1|AJ463502 AJ463502 S00002 Hordeum vulgare subs... 110 3e-032
gb|BQ467895.1|BQ467895 HR01E04r HR Hordeum vulgare subsp. v... 105 4e-032
gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow st... 137 1e-031
gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachi... 136 2e-031
gb|BQ658207.1|BQ658207 HA05E07u HA Hordeum vulgare subsp. v... 81 4e-031
gb|BG416780.1|BG416780 HVSMEk0014H23f Hordeum vulgare testa... 104 9e-031
gb|BU990646.1|BU990646 HF25K12r HF Hordeum vulgare subsp. v... 92 9e-031
gb|CA004842.1|CA004842 HS18N14r HS Hordeum vulgare subsp. v... 133 1e-030
gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow st... 131 7e-030
gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green... 130 1e-029
gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachi... 127 9e-029
gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 ... 76 1e-028
gb|BI958420.1|BI958420 HVSMEn0014O10f Hordeum vulgare rachi... 94 1e-028
gb|BU984183.1|BU984183 HF03D17r HF Hordeum vulgare subsp. v... 114 6e-027
gb|BG368897.2|BG368897 HVSMEi0021D09f Hordeum vulgare 20 DA... 76 9e-027
gb|BG300504.2|BG300504 HVSMEb0017E15f Hordeum vulgare seedl... 90 2e-026
gb|BM097179.2|BM097179 EBpi07_SQ002_K14_R pistil, 12 DPA, n... 114 4e-026
gb|BU983370.1|BU983370 HA29H20r HA Hordeum vulgare subsp. v... 83 2e-025
gb|BM442090.2|BM442090 EBan01_SQ002_C16_R anther, yellow st... 77 2e-025
gb|BJ453165.1|BJ453165 BJ453165 K. Sato unpublished cDNA li... 105 2e-024
gb|CA028060.1|CA028060 HZ60N21r HZ Hordeum vulgare subsp. v... 75 1e-023
gb|BJ460714.1|BJ460714 BJ460714 K. Sato unpublished cDNA li... 105 1e-023
gb|BF259315.3|BF259315 HVSMEf0019E07f Hordeum vulgare seedl... 76 4e-023
gb|BF257516.2|BF257516 HVSMEf0013C01f Hordeum vulgare seedl... 108 4e-023
gb|BQ753440.1|BQ753440 EBan01_SQ004_E11_R anther, yellow st... 106 2e-022
gb|BE421427.1|BE421427 HWM009.B12 ITEC HWM Barley Leaf Libr... 105 5e-022
gb|CA001233.1|CA001233 HS18N14u HS Hordeum vulgare subsp. v... 105 5e-022
gb|BQ753555.1|BQ753555 EBan01_SQ004_J12_R anther, yellow st... 60 6e-022
gb|BF260322.3|BF260322 HVSMEf0021L02f Hordeum vulgare seedl... 103 2e-021
gb|AJ461923.1|AJ461923 AJ461923 S00002 Hordeum vulgare subs... 101 6e-021
gb|BQ661556.1|BQ661556 HM03P13u HM Hordeum vulgare subsp. v... 100 9e-021
>gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F166 5-PRIME, mRNA sequence
Length = 750
Score = 286 bits (620), Expect(3) = 1e-095
Identities = 111/143 (77%), Positives = 123/143 (86%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 79 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 258
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C++PGL V FH+E GSN
Sbjct: 259 YPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAV 438
Query: 374 YLAVLVEYENGDGDVVQVDLMES 442
Y+A+LVEYENGDGDVVQVDLMES
Sbjct: 439 YMAILVEYENGDGDVVQVDLMES 507
Score = 148 bits (318), Expect(3) = 2e-044
Identities = 72/143 (50%), Positives = 80/143 (55%)
Frame = -1 / -2
Query: 441 DSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXX 262
DS+R A L+P S W T PG TL+NWMSM+PA
Sbjct: 506 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 327
Query: 261 XXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIG 82
A PKAVPLRSKW*GATG**FMSV+ITVS PEHA +H I * P PLPSL G
Sbjct: 326 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 147
Query: 81 SLPHDVIAEKGGMFTPLKPHAPP 13
LP +V+A G FT L P APP
Sbjct: 146 WLPQEVMAMNGYRFTFLNPQAPP 78
Score = 80.3 bits (169), Expect(3) = 1e-095
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = +2 / +1
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIP 601
G W MRESWGSIWR+D+ LQ PFS+R+ NESGKTLVA VIP
Sbjct: 529 GRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIP 663
Score = 43.2 bits (88), Expect(3) = 2e-044
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = -3 / -1
Query: 622 VVGLPVCRNDLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAPGLAHGLP 473
V+ L +D+ +RL GLV DA E L+ GV P G+P LAH P
Sbjct: 684 VLXLQFXGDDVAGDERLXGLVADADGEWRLETMVGVEAPDGSPRLAHPRP 535
Score = 26.3 bits (51), Expect(3) = 2e-044
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -2
Query: 650 TRTGRWSCRRCRAAS 606
T TGRWS RRC +S
Sbjct: 713 TCTGRWSGRRCWXSS 669
Score = 22.6 bits (43), Expect(3) = 1e-095
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 599 PADWQPDNVYSSIVQF 646
P +W+ + Y SIVQ+
Sbjct: 662 PKNWRXNTFYRSIVQY 709
>gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003B13f, mRNA sequence
Length = 789
Score = 286 bits (620), Expect(2) = 7e-095
Identities = 111/143 (77%), Positives = 123/143 (86%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 23 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 202
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C++PGL V FH+E GSN
Sbjct: 203 YPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAV 382
Query: 374 YLAVLVEYENGDGDVVQVDLMES 442
Y+A+LVEYENGDGDVVQVDLMES
Sbjct: 383 YMAILVEYENGDGDVVQVDLMES 451
Score = 148 bits (318), Expect(2) = 4e-042
Identities = 72/143 (50%), Positives = 80/143 (55%)
Frame = -1 / -1
Query: 441 DSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXX 262
DS+R A L+P S W T PG TL+NWMSM+PA
Sbjct: 450 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 271
Query: 261 XXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIG 82
A PKAVPLRSKW*GATG**FMSV+ITVS PEHA +H I * P PLPSL G
Sbjct: 270 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 91
Query: 81 SLPHDVIAEKGGMFTPLKPHAPP 13
LP +V+A G FT L P APP
Sbjct: 90 WLPQEVMAMNGYRFTFLNPQAPP 22
Score = 81.3 bits (171), Expect(2) = 7e-095
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2 / +2
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSS 634
G W MRESWG IWR+D+ LQ PFS+R+ NESG+TLVA VIP +P+ +Y S
Sbjct: 473 GRWTRMRESWGFIWRLDSNHRLQAPFSIRIRNESGQTLVAR*VIPKKGRPNTLYCS 640
Score = 43.2 bits (88), Expect(2) = 4e-042
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = -3 / -3
Query: 619 VGLPVCRNDLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAPGLAHGLP 473
VG P+ +DL ++RL GLV DA E L GV P +P LAH P
Sbjct: 625 VGPPLLGDDLAGYKRLPGLVADADGEWRL*TMVGVEAPDESPRLAHPRP 479
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 224 bits (483), Expect(3) = 1e-094
Identities = 89/117 (76%), Positives = 99/117 (84%)
Frame = +2 / +2
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV ETVIITDMNYYPV+ +HFDLSGTAFGAMAKD N+ELRHAGIID+QF+RVPC
Sbjct: 230 HPACSGVPETVIITDMNYYPVSRFHFDLSGTAFGAMAKDGRNEELRHAGIIDMQFRRVPC 409
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSPDDGEPTGVWEPMRE 490
QYPGLTVTFH++ GSNP YLA+LVEYENGDGDV QVD+M+S PD G P E
Sbjct: 410 QYPGLTVTFHVQHGSNPYYLAILVEYENGDGDVDQVDMMQSRPDAAAGEGGMAPTGE 580
Score = 138 bits (296), Expect(3) = 9e-071
Identities = 66/117 (56%), Positives = 71/117 (60%)
Frame = -1 / -3
Query: 489 SRMGSQTPVGSPSSGLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGT 310
S +G+ P + +SG D I AR* GLEP W VTV PGYW GT
Sbjct: 579 SPVGAIPPSPAAASGRDCIMSTWSTSPSPFSYSTRMAR**GLEPCCTWNVTVSPGYWHGT 400
Query: 309 LLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGW 139
LLN MSM+PA S AMAPKAVPLRSKW TG**FMSVMITVS TPEHAGW
Sbjct: 399 LLNCMSMMPACRSSSLRPSLAMAPKAVPLRSKWKRDTG**FMSVMITVSGTPEHAGW 229
Score = 132 bits (283), Expect(3) = 4e-044
Identities = 49/64 (76%), Positives = 56/64 (87%)
Frame = +2 / +2
Query: 461 PTGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSSIV 640
PTG W PM ESWGSIWRMDTRRP+QGPFSLR+TNESGKTLVADQV P DW+P+ +YSS +
Sbjct: 569 PTGEWVPMTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVNPGDWEPNEIYSSFI 748
Query: 641 QFE* 652
Q +*
Sbjct: 749 QVD* 760
Score = 108 bits (230), Expect(3) = 8e-035
Identities = 46/64 (71%), Positives = 50/64 (78%)
Frame = -1 / -3
Query: 648 SNWTMEL*TLSGCQSAGMTWSATSVLPDSLVTRSEKGPCSGRRVSILHMEPQDSRMGSQT 469
S W EL* G QS G+TWSATSVLPDSLV RSEKGPC GRRVSI MEPQDS MG+ +
Sbjct: 756 STWMKEL*ISLGSQSPGLTWSATSVLPDSLVMRSEKGPCMGRRVSIRQMEPQDSVMGTHS 577
Query: 468 PVGS 457
PVG+
Sbjct: 576 PVGA 565
Score = 105 bits (223), Expect(3) = 1e-094
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFSAMTSCGNEP+FKDGKGCGSCYQIRC
Sbjct: 98 GGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRC 217
Score = 94.1 bits (199), Expect(3) = 9e-071
Identities = 41/60 (68%), Positives = 45/60 (75%)
Frame = -3 / -2
Query: 652 LLELDDGAVDVVGLPVCRNDLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAPGLAHGLP 473
L++LD+GAVD VGLPV DLV +RLAGLVGDAQREG L VHPP GAPGL HG P
Sbjct: 760 LVDLDEGAVDFVGLPVAGIDLVGDERLAGLVGDAQREGALHGAPCVHPPDGAPGLGHGHP 581
Score = 73.9 bits (155), Expect(3) = 9e-071
Identities = 29/40 (72%), Positives = 32/40 (80%)
Frame = -1 / -3
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
HRIW*Q+P PLPSLK GSLP +V+AEKGG T L P APP
Sbjct: 216 HRIW*QEPQPLPSLKSGSLPQEVMAEKGGRLTFLNPQAPP 97
Score = 57.4 bits (119), Expect(3) = 1e-094
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = +3 / +3
Query: 507 GGWTPAGRCKGPSRCASPTSPARRWWRTRSFRQTG 611
GGWT C+ PSRCASPTSPARR TRS TG
Sbjct: 615 GGWTHGAPCRAPSRCASPTSPARRSSPTRSIPATG 719
Score = 44.6 bits (91), Expect(3) = 4e-044
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1 / +1
Query: 46 ATFLGDDVVRQRANLQGRQRMRVLLPDPVQ 135
AT L D++RQRA LQGRQ +R+LLPD V+
Sbjct: 130 ATLLRHDLLRQRAALQGRQGLRLLLPDTVR 219
Score = 44.1 bits (90), Expect(3) = 4e-044
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1 / +1
Query: 301 VQEGSLPVPWSDGDLPHRARLQPQLP 378
VQ+G++PVP +DGD+P AR QP LP
Sbjct: 391 VQKGAVPVPGADGDVPRAARFQPLLP 468
Score = 40.9 bits (83), Expect(3) = 8e-035
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = -2 / -1
Query: 131 TGSGSRTRILCRP*RLARCRTTSSPRKVA 45
T SGSR+R CRP*R ARCR S R+VA
Sbjct: 215 TVSGSRSRSPCRP*RAARCRRRSWRRRVA 129
Score = 40.5 bits (82), Expect(3) = 8e-035
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = -3 / -2
Query: 379 QVVGVGAALDVEGHRQTRVLAGNPLE 302
QVVGVG L VE HRQ RVLA +P E
Sbjct: 469 QVVGVGTVLHVERHRQPRVLARHPSE 392
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P122 5-PRIME, mRNA sequence
Length = 717
Score = 255 bits (552), Expect(2) = 2e-092
Identities = 99/135 (73%), Positives = 114/135 (84%)
Frame = +2 / +1
Query: 53 FSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNYYPVAPYHFDLSGT 232
F++MTSCGN+P+FKDGKGCGSCY+IRC+ +CSG ETVIITDMNYYPVAPYHFDLSGT
Sbjct: 1 FASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNYYPVAPYHFDLSGT 180
Query: 233 AFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDG 412
AFG +AK ND LRH+GIIDI+F RVPC++PGL + FH+E SNP Y AVLVEYE+GDG
Sbjct: 181 AFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDG 360
Query: 413 DVVQVDLMESSPDDG 457
DVVQVDLMES G
Sbjct: 361 DVVQVDLMESRGPGG 405
Score = 126 bits (269), Expect(2) = 2e-041
Identities = 64/132 (48%), Positives = 72/132 (54%)
Frame = -1 / -2
Query: 456 PSSGLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAX 277
P DS+R TA+* G E S W + PG GT +N MSM+P
Sbjct: 404 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEW 225
Query: 276 XXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWALHRIW*QDPHPLP 97
FA P AVPLRSKW*GATG**FMSVMITVS PE LH I * +PHPLP
Sbjct: 224 RSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQDWSFLHLIL*HEPHPLP 45
Query: 96 SLKIGSLPHDVI 61
SL G LP +V+
Sbjct: 44 SLNNGWLPQEVM 9
Score = 104 bits (221), Expect(2) = 2e-092
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +2 / +1
Query: 455 GEPTGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSS 634
G G W MRESWGS+WR+D+ LQ PFS+R+ NESGKTLVA++VIPA+W+P+ Y S
Sbjct: 394 GPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFYRS 573
Query: 635 IVQFE* 652
VQ+ *
Sbjct: 574 FVQYS* 591
Score = 63.8 bits (133), Expect(2) = 2e-041
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = -3 / -1
Query: 643 LDDGAVDVVGLPVCRNDLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAPGLAHGLP 473
L +GAV+ VG PV R+DLV +RLAGLV DA E L+ GV P GAP L H P
Sbjct: 582 LHEGAVEGVGPPVGRDDLVGDERLAGLVADADGEWRLEAVVGVEAPDGAPRLPHPRP 412
>gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J225 5-PRIME, mRNA sequence
Length = 776
Score = 287 bits (622), Expect(2) = 4e-090
Identities = 111/145 (76%), Positives = 123/145 (84%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 196 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 375
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C++PGL V FH+E GSN
Sbjct: 376 YPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAV 555
Query: 374 YLAVLVEYENGDGDVVQVDLMESSP 448
Y+A+LVEYENGDGDVVQVDLME P
Sbjct: 556 YMAILVEYENGDGDVVQVDLMEXRP 630
Score = 146 bits (314), Expect(2) = 6e-039
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = -1 / -1
Query: 366 LEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**F 187
L+P S W T PG TL+NWMSM+PA A PKAVPLRSKW*GATG**F
Sbjct: 548 LDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**F 369
Query: 186 MSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
MSV+ITVS PEHA +H I * P PLPSL G LP +V+A G FT L P APP
Sbjct: 368 MSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPP 195
Score = 64.3 bits (134), Expect(2) = 4e-090
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = +2 / +3
Query: 452 DGEPTGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQV 595
DG G W M ESWGSIW +D+ LQ P S+R+ NESGK L A V
Sbjct: 633 DGAAAGRWTRMPESWGSIWGLDSXNRLQXPXSIRIRNESGKKLXARNV 776
Score = 34.5 bits (69), Expect(2) = 6e-039
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3 / -1
Query: 595 DLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAPGLAHGLP 473
D+ + L GLV DA L+ GV P G+P L H P
Sbjct: 776 DVAGXELLXGLVADADGXWXLETIXGVEAPDGSPRLGHXXP 654
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 212 bits (457), Expect(3) = 7e-086
Identities = 84/103 (81%), Positives = 93/103 (90%)
Frame = +2 / +3
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 312 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 491
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSP 448
QYPGLTVTFH+E GSNP Y+A+LVEYENGDGDV Q+D+MES P
Sbjct: 492 QYPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESRP 620
Score = 125 bits (267), Expect(3) = 6e-044
Identities = 57/104 (54%), Positives = 61/104 (58%)
Frame = -1 / -3
Query: 447 GLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXX 268
G DSI A * G +P S W VTV PGYW GTLLN M ++PA
Sbjct: 619 GRDSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSS 440
Query: 267 XXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWA 136
AMAPKAVPLRSKW* TG *FMSVMITV TPEHAGW+
Sbjct: 439 SLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAGWS 308
Score = 102 bits (217), Expect(3) = 7e-086
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 180 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 68.9 bits (144), Expect(3) = 6e-044
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -3
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 298 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 179
Score = 42.8 bits (87), Expect(3) = 7e-086
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 461 PTGVWEPMRESWGSIWRM 514
PTG W PM+ESW SIWRM
Sbjct: 648 PTGQWVPMKESWXSIWRM 701
Score = 22.1 bits (42), Expect(3) = 6e-044
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3 / -2
Query: 514 HPPYGAPGLAHGLP 473
HPP P L HG P
Sbjct: 701 HPPDRPPRLLHGHP 660
>gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. vulgare cDNA clone HU02M06
5-PRIME, mRNA sequence
Length = 623
Score = 286 bits (620), Expect(2) = 8e-086
Identities = 111/143 (77%), Positives = 123/143 (86%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 44 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 223
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C++PGL V FH+E GSN
Sbjct: 224 YPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAV 403
Query: 374 YLAVLVEYENGDGDVVQVDLMES 442
Y+A+LVEYENGDGDVVQVDLMES
Sbjct: 404 YMAILVEYENGDGDVVQVDLMES 472
Score = 148 bits (318), Expect(2) = 1e-038
Identities = 72/143 (50%), Positives = 80/143 (55%)
Frame = -1 / -3
Query: 441 DSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXX 262
DS+R A L+P S W T PG TL+NWMSM+PA
Sbjct: 471 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 292
Query: 261 XXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIG 82
A PKAVPLRSKW*GATG**FMSV+ITVS PEHA +H I * P PLPSL G
Sbjct: 291 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 112
Query: 81 SLPHDVIAEKGGMFTPLKPHAPP 13
LP +V+A G FT L P APP
Sbjct: 111 WLPQEVMAMNGYRFTFLNPQAPP 43
Score = 51.0 bits (105), Expect(2) = 8e-086
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +2 / +3
Query: 452 DGEPTGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQV 595
DG G WR+D+ LQ PFS+R+ NESGKTLVA V
Sbjct: 480 DGAAAGGGRGCASRGDPFWRLDSNHRLQAPFSIRIRNESGKTLVARNV 623
Score = 31.8 bits (63), Expect(2) = 1e-038
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3 / -1
Query: 595 DLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAP 494
D+ +RLAGLV DA E L+ GV P P
Sbjct: 623 DVAGDERLAGLVADADGEWRLETMVGVEAPEWIP 522
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018F10f, mRNA sequence
Length = 669
Score = 288 bits (623), Expect(2) = 7e-085
Identities = 112/144 (77%), Positives = 127/144 (88%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 144 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 323
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VTFH+E+GSNP
Sbjct: 324 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPV 503
Query: 374 YLAVLVEYENGDGDVVQVDLMESS 445
Y AVLVEYE+GDGD+VQVDLME++
Sbjct: 504 YFAVLVEYEDGDGDLVQVDLMEAN 575
Score = 180 bits (387), Expect = 1e-044
Identities = 82/144 (56%), Positives = 91/144 (63%)
Frame = -1 / -3
Query: 444 LDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXX 265
L S+R TA+ G +P S WKVT+RPG GTLLNWMSM+P
Sbjct: 574 LASMRSTCTKSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFS 395
Query: 264 XXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKI 85
AMAP AVPLRSKW ATG**FMSVM TVS PE +HRIW*Q+PHPLPSLK+
Sbjct: 394 LRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKM 215
Query: 84 GSLPHDVIAEKGGMFTPLKPHAPP 13
GSLPHDV+ EKG L PHAPP
Sbjct: 214 GSLPHDVMEEKGYWLVFLNPHAPP 143
Score = 46.4 bits (95), Expect(2) = 7e-085
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 479 PMRESWGSIWRMDTRRPLQGPFSL 550
PMRESWGSIWR+++ LQ PFS+
Sbjct: 592 PMRESWGSIWRVESGHRLQAPFSM 663
>gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87h3 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 701
Score = 209 bits (450), Expect(3) = 2e-084
Identities = 83/103 (80%), Positives = 92/103 (89%)
Frame = +2 / +3
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 318 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 497
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSP 448
QYP LTVTFH+E GSNP Y+A+LVEYENGDGDV Q+D+MES P
Sbjct: 498 QYPXLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESRP 626
Score = 121 bits (258), Expect(3) = 4e-043
Identities = 56/104 (53%), Positives = 60/104 (57%)
Frame = -1 / -2
Query: 447 GLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXX 268
G DSI A * G +P S W VTV GYW GTLLN M ++PA
Sbjct: 625 GRDSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSS 446
Query: 267 XXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWA 136
AMAPKAVPLRSKW* TG *FMSVMITV TPEHAGW+
Sbjct: 445 SLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAGWS 314
Score = 102 bits (217), Expect(3) = 2e-084
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 186 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 305
Score = 68.9 bits (144), Expect(3) = 4e-043
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 304 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 185
Score = 41.4 bits (84), Expect(3) = 2e-084
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / +3
Query: 461 PTGVWEPMRESWGSIW 508
PTG W PM+ESWGSIW
Sbjct: 654 PTGQWVPMKESWGSIW 701
Score = 23.5 bits (45), Expect(3) = 4e-043
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 504 MEPQDSRMGSQTPVG 460
++P DS MG+ PVG
Sbjct: 697 IDPHDSFMGTHCPVG 653
>gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_D15 5', mRNA sequence
Length = 477
Score = 297 bits (644), Expect(2) = 7e-081
Identities = 118/151 (78%), Positives = 129/151 (85%)
Frame = +2 / +3
Query: 110 GSCYQIRCKAHPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGI 289
G+ + RC AH ACSGV ETVIITDMNYYPV+ YHFDLSGTAFGAMAK NDELRHAGI
Sbjct: 24 GAAHATRCVAHRACSGVPETVIITDMNYYPVSRYHFDLSGTAFGAMAKYGRNDELRHAGI 203
Query: 290 IDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSPDDGEPTG 469
ID+QFKRVPCQYPGLTVTF ++ GSNPNYLA+LVEYE+GDGDV QVD+MES D PTG
Sbjct: 204 IDMQFKRVPCQYPGLTVTFRVQHGSNPNYLAILVEYEDGDGDVAQVDIMESRLPDRAPTG 383
Query: 470 VWEPMRESWGSIWRMDTRRPLQGPFSLRVTN 562
W PMRESWGSIWR+D RPLQGPFSLRVT+
Sbjct: 384 YWTPMRESWGSIWRLDRLRPLQGPFSLRVTD 476
Score = 171 bits (369), Expect(2) = 2e-046
Identities = 84/150 (56%), Positives = 91/150 (60%)
Frame = -1 / -3
Query: 558 VTRSEKGPCSGRRVSILHMEPQDSRMGSQTPVGSPSSGLDSIRXXXXXXXXXXXXXXXTA 379
VTRSE GPCSGR +S M+P DS +G Q PVG+ S DSI A
Sbjct: 472 VTRSENGPCSGRSLSRRQMDPHDSLIGVQYPVGALSGSRDSIMSTCATSPSPSSYSTRIA 293
Query: 378 R*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GAT 199
R*LGL+P VTV PGYW GTLLN MSM+PA AMAPKAVPLRSK * T
Sbjct: 292 R*LGLDPCCTRNVTVSPGYWHGTLLNCMSMMPAWRSSSLRPYLAMAPKAVPLRSK**RET 113
Query: 198 G**FMSVMITVSATPEHAGWALHRIW*QDP 109
G**FMSVMITVS TPE A WA H + * P
Sbjct: 112 G**FMSVMITVSGTPEQARWATHLVA*AAP 23
Score = 34.1 bits (68), Expect(2) = 2e-046
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 129 RIW*QDPHPLPSLKIG 82
R W* +PHPLPSLK G
Sbjct: 48 RTW*HEPHPLPSLKSG 1
Score = 23.5 bits (45), Expect(2) = 7e-081
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1 / +1
Query: 82 ANLQGRQRMRVLLP 123
A LQGRQ +R++LP
Sbjct: 1 AALQGRQGVRLMLP 42
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005E06f, mRNA sequence
Length = 796
Score = 272 bits (588), Expect(2) = 1e-080
Identities = 107/144 (74%), Positives = 122/144 (84%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+M GN PIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 127 GGACGFKNTNQYPFSSMGGGGNXPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 306
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VTFH+E+GSNP
Sbjct: 307 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPV 486
Query: 374 YLAVLVEYENGDGDVVQVDLMESS 445
Y AVLVEY +GDGD+VQVDLME++
Sbjct: 487 YFAVLVEYXDGDGDMVQVDLMEAN 558
Score = 168 bits (361), Expect(2) = 2e-042
Identities = 79/151 (52%), Positives = 89/151 (58%)
Frame = -1 / -3
Query: 465 VGSPSSGLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMI 286
+G L S+R TA+ G +P S WKVT+RPG GTLLNWMSM+
Sbjct: 578 IGVHVQELASMRSTCTMSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMM 399
Query: 285 PAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWALHRIW*QDPH 106
P AMAP AVPLRSKW ATG**FMSVM TVS PE +HRIW*Q+PH
Sbjct: 398 PECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHRIW*QEPH 219
Query: 105 PLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
PLPSLK+G LP + EKG L PHAPP
Sbjct: 218 PLPSLKMGXLPPPPMEEKGYWLVFLNPHAPP 126
Score = 48.7 bits (100), Expect(2) = 1e-080
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 473 WEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIP 601
W PMRESWGSI R+D+ + P S + NE G+ L Q P
Sbjct: 568 WTPMRESWGSILRLDSGHGWRPPLSFALXNEGGRELGGRQGDP 696
Score = 24.9 bits (48), Expect(2) = 2e-042
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1 / -3
Query: 579 SVLPDSLVTRSEKGPCSGRRVSILHMEPQDSRMG 478
S LP S + ++KG S ++P DSR+G
Sbjct: 674 SSLPPSXLNANDKGGLQPCPESSRKIDPHDSRIG 573
>gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009C23f, mRNA sequence
Length = 762
Score = 267 bits (578), Expect(2) = 2e-080
Identities = 102/140 (72%), Positives = 119/140 (85%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PFS+MTSCGN+P+FKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 249 GGACGFKHVNQYPFSSMTSCGNQPLFKDGKGCGSCYQIRCSGDRSCSGNIETVMITDMNY 428
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGA+AK N++LRH+GIIDIQF+RVPC +PGL + FH+ GSN
Sbjct: 429 YPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFRRVPCNFPGLKINFHVVEGSNAV 608
Query: 374 YLAVLVEYENGDGDVVQVDL 433
YLAVL+EYE+ DGDV+QVD+
Sbjct: 609 YLAVLIEYEDMDGDVIQVDM 668
Score = 166 bits (356), Expect(2) = 2e-044
Identities = 75/123 (60%), Positives = 83/123 (67%)
Frame = -1 / -3
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GA 202
AR LEP + WK+ +RPG GTLLNWMSM+P A APKAVPLRSKW A
Sbjct: 616 ARYTALEPSTTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWA 437
Query: 201 TG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPH 22
TG**FMSV+ITVS PE LHRIW*Q+P PLPSL G LP +V+ EKG FT LKP
Sbjct: 436 TG**FMSVIITVSMLPEQERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQ 257
Query: 21 APP 13
APP
Sbjct: 256 APP 248
Score = 52.4 bits (108), Expect(2) = 2e-080
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +2 / +3
Query: 455 GEPTGVWEPMRESWGSIWRMDTRRPLQGP 541
G +G W MRESWGSIWRMD+ LQGP
Sbjct: 672 GANSGSWMAMRESWGSIWRMDSNHRLQGP 758
Score = 33.6 bits (67), Expect(2) = 2e-044
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 538 PLQRPAGVHPPYGAPGLAHGLP 473
PL+ GVHPP G+P LAH P
Sbjct: 755 PLKPVVGVHPPDGSPRLAHRHP 690
>gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14A15
5-PRIME, mRNA sequence
Length = 616
Score = 286 bits (620), Expect(2) = 6e-079
Identities = 111/143 (77%), Positives = 123/143 (86%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 127 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 306
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C++PGL V FH+E GSN
Sbjct: 307 YPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAV 486
Query: 374 YLAVLVEYENGDGDVVQVDLMES 442
Y+A+LVEYENGDGDVVQVDLMES
Sbjct: 487 YMAILVEYENGDGDVVQVDLMES 555
Score = 148 bits (318), Expect = 4e-035
Identities = 72/143 (50%), Positives = 80/143 (55%)
Frame = -1 / -3
Query: 441 DSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXX 262
DS+R A L+P S W T PG TL+NWMSM+PA
Sbjct: 554 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 375
Query: 261 XXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIG 82
A PKAVPLRSKW*GATG**FMSV+ITVS PEHA +H I * P PLPSL G
Sbjct: 374 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSG 195
Query: 81 SLPHDVIAEKGGMFTPLKPHAPP 13
LP +V+A G FT L P APP
Sbjct: 194 WLPQEVMAMNGYRFTFLNPQAPP 126
Score = 28.1 bits (55), Expect(2) = 6e-079
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 467 GVWEPMRESWGSI 505
G W MRESWGSI
Sbjct: 577 GRWTRMRESWGSI 615
>gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL94h5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 661
Score = 212 bits (457), Expect(2) = 8e-079
Identities = 84/103 (81%), Positives = 93/103 (90%)
Frame = +2 / +2
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 311 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 490
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSP 448
QYPGLTVTFH+E GSNP Y+A+LVEYENGDGDV Q+D+MES P
Sbjct: 491 QYPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESRP 619
Score = 125 bits (267), Expect(2) = 9e-043
Identities = 57/104 (54%), Positives = 61/104 (58%)
Frame = -1 / -2
Query: 447 GLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXX 268
G DSI A * G +P S W VTV PGYW GTLLN M ++PA
Sbjct: 618 GRDSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSS 439
Query: 267 XXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWA 136
AMAPKAVPLRSKW* TG *FMSVMITV TPEHAGW+
Sbjct: 438 SLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAGWS 307
Score = 102 bits (217), Expect(2) = 8e-079
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 178 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 68.9 bits (144), Expect(2) = 9e-043
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -3
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 177
>gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I03
5-PRIME, mRNA sequence
Length = 597
Score = 212 bits (457), Expect(2) = 8e-079
Identities = 84/103 (81%), Positives = 93/103 (90%)
Frame = +2 / +1
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 265 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 444
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSP 448
QYPGLTVTFH+E GSNP Y+A+LVEYENGDGDV Q+D+MES P
Sbjct: 445 QYPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESRP 573
Score = 127 bits (271), Expect(2) = 3e-043
Identities = 58/104 (55%), Positives = 62/104 (59%)
Frame = -1 / -2
Query: 447 GLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXX 268
G DSI A * GL+P S W VTV PGYW GTLLN M ++PA
Sbjct: 572 GRDSIMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSS 393
Query: 267 XXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWA 136
AMAPKAVPLRSKW* TG *FMSVMITV TPEHAGW+
Sbjct: 392 SLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAGWS 261
Score = 102 bits (217), Expect(2) = 8e-079
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 133 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 252
Score = 68.9 bits (144), Expect(2) = 3e-043
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 251 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 132
>gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. vulgare cDNA clone HA05E07
5-PRIME, mRNA sequence
Length = 504
Score = 207 bits (447), Expect(2) = 2e-077
Identities = 82/100 (82%), Positives = 91/100 (91%)
Frame = +2 / +2
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 203 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 382
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLME 439
QYPGLTVTFH+E GSNP Y+A+LVEYENGDGDV Q+D+ME
Sbjct: 383 QYPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 502
Score = 125 bits (267), Expect(2) = 9e-043
Identities = 57/102 (55%), Positives = 61/102 (59%)
Frame = -1 / -1
Query: 441 DSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXX 262
DSI A * GL+P S W VTV PGYW GTLLN M ++PA
Sbjct: 504 DSIMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSL 325
Query: 261 XXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWA 136
AMAPKAVPLRSKW* TG *FMSVMITV TPEHAGW+
Sbjct: 324 RPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAGWS 199
Score = 102 bits (217), Expect(2) = 2e-077
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 71 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 190
Score = 68.9 bits (144), Expect(2) = 9e-043
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -1
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 189 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 70
>gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL63c5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 140 bits (301), Expect(4) = 9e-077
Identities = 55/72 (76%), Positives = 62/72 (86%)
Frame = +2 / +3
Query: 233 AFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDG 412
AFG MAK NDELRHAGII++QFKRVPCQYP LTVTFH+E GSNP Y+ +LVEYENGDG
Sbjct: 348 AFGGMAKYGRNDELRHAGIINMQFKRVPCQYPXLTVTFHVEEGSNPFYMGILVEYENGDG 527
Query: 413 DVVQVDLMESSP 448
DV Q+D+MES P
Sbjct: 528 DVKQLDIMESRP 563
Score = 102 bits (217), Expect(4) = 9e-077
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 122 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 241
Score = 68.9 bits (144), Expect(4) = 3e-037
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 240 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 121
Score = 67.5 bits (141), Expect(4) = 9e-077
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2 / +2
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGT 232
HPACSGV +TVIITDMNY PV+ YHFDLSGT
Sbjct: 254 HPACSGVPKTVIITDMNYDPVSRYHFDLSGT 346
Score = 62.0 bits (129), Expect(4) = 3e-037
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = -1 / -2
Query: 237 KAVPLRSKW*GATG**FMSVMITVSATPEHAGWA 136
+ VPLRSKW* TG *FMSVMITV TPEHAGW+
Sbjct: 351 RRVPLRSKW*RETGS*FMSVMITVLGTPEHAGWS 250
Score = 57.0 bits (118), Expect(4) = 3e-037
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = -1 / -1
Query: 369 GLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKA 232
G +P S W VTV GYW GTLLN M ++PA AM PKA
Sbjct: 484 GFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSLRPYLAMPPKA 347
Score = 34.5 bits (69), Expect(4) = 9e-077
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 461 PTGVWEPMRESWGS 502
PTG W PM+ESWGS
Sbjct: 591 PTGQWVPMKESWGS 632
Score = 23.5 bits (45), Expect(4) = 3e-037
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1 / -1
Query: 504 MEPQDSRMGSQTPVG 460
++P DS MG+ PVG
Sbjct: 634 IDPHDSFMGTHCPVG 590
>gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5B4 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 203 bits (437), Expect(2) = 5e-076
Identities = 81/101 (80%), Positives = 90/101 (89%)
Frame = +2 / +3
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 312 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 491
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMES 442
QYPGLTVTFH+E SNP Y+A+L EYENGDGDV Q+D+MES
Sbjct: 492 QYPGLTVTFHVEEXSNPFYMAILGEYENGDGDVKQLDIMES 614
Score = 111 bits (237), Expect(2) = 1e-038
Identities = 51/82 (62%), Positives = 55/82 (67%)
Frame = -1 / -1
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GA 202
A * G + S VTV PGYW GTLLN M ++PA AMAPKAVPLRSKW*
Sbjct: 553 AM*NGFDXSST*NVTVNPGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RE 374
Query: 201 TG**FMSVMITVSATPEHAGWA 136
TG *FMSVMITV TPEHAGW+
Sbjct: 373 TGS*FMSVMITVLGTPEHAGWS 308
Score = 102 bits (217), Expect(2) = 5e-076
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 180 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 68.9 bits (144), Expect(2) = 1e-038
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -1
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 298 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 179
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 214 bits (462), Expect(3) = 2e-075
Identities = 83/107 (77%), Positives = 92/107 (85%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 166 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 345
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGL 334
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++P L
Sbjct: 346 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPCL 486
Score = 155 bits (334), Expect(2) = 8e-039
Identities = 69/108 (63%), Positives = 75/108 (69%)
Frame = -1 / -3
Query: 336 VRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSAT 157
+R G GTLLNWMSM+P AMAP AVPLRSKW ATG**FMSVM TVS
Sbjct: 488 LRQGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 309
Query: 156 PEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PHAPP
Sbjct: 308 PEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPP 165
Score = 56.1 bits (116), Expect(3) = 2e-075
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +2 / +3
Query: 338 VTFHIERGSNPNYLAVLVEYENGDGDVVQ 424
VTFH+E+ SNP Y AVL EYE+GDGDVVQ
Sbjct: 489 VTFHVEQXSNPVYFAVLGEYEDGDGDVVQ 575
Score = 51.5 bits (106), Expect(3) = 2e-075
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +2 / +3
Query: 452 DGEPTGVWEPMRESWGSIWRMDTRRPLQGPFS 547
+G G W PMRESWGSIW +D LQ PFS
Sbjct: 585 NGANFGTWTPMRESWGSIWGLDFGHRLQAPFS 680
Score = 24.9 bits (48), Expect(2) = 8e-039
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1 / -1
Query: 546 EKGPCSGRRVSILHMEPQDSRMGSQTPVGSP 454
EKG S S M+P DSR+G P +P
Sbjct: 679 EKGA*SRCPKSSPQMDPHDSRIGVHVPKLAP 587
>gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20o17 5', mRNA sequence
Length = 590
Score = 199 bits (430), Expect(2) = 8e-075
Identities = 80/101 (79%), Positives = 87/101 (86%)
Frame = +2 / +1
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
H ACSG ETV+ITDMNYYPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C
Sbjct: 10 HKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVAC 189
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMES 442
++PGL V FH+E GSN Y+A+LVEYENGDGDVVQVDLMES
Sbjct: 190 EFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMES 312
Score = 106 bits (226), Expect(2) = 9e-037
Identities = 50/99 (50%), Positives = 55/99 (55%)
Frame = -1 / -1
Query: 441 DSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXX 262
DS+R A L+P S W T PG TL+NWMSM+PA
Sbjct: 311 DSMRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSL 132
Query: 261 XXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHA 145
A PKAVPLRSKW*GATG**FMSV+ITVS PEHA
Sbjct: 131 RPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHA 15
Score = 101 bits (215), Expect(2) = 8e-075
Identities = 39/62 (62%), Positives = 47/62 (75%)
Frame = +2 / +1
Query: 467 GVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSSIVQF 646
G W MRESWGSIWR+D+ LQ PFS+R+ NESGKTLVA VIP +W+P+ Y SIVQ+
Sbjct: 334 GRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIPKNWRPNTFYRSIVQY 513
Query: 647 E* 652
*
Sbjct: 514 S* 519
Score = 67.5 bits (141), Expect(2) = 9e-037
Identities = 32/64 (50%), Positives = 38/64 (59%)
Frame = -3 / -3
Query: 664 WHILLLELDDGAVDVVGLPVCRNDLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAPGLA 485
W L LDDGAV+ VG PV +D+ +RLAGLV DA E L+ GV P G+P LA
Sbjct: 531 WPSYLAVLDDGAVEGVGPPVLGDDVAGDERLAGLVADADGEWRLETMVGVEAPDGSPRLA 352
Query: 484 HGLP 473
H P
Sbjct: 351 HPRP 340
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F11f, mRNA sequence
Length = 630
Score = 279 bits (603), Expect = 2e-074
Identities = 109/143 (76%), Positives = 124/143 (86%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 202 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 381
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VTFH+E+GSNP
Sbjct: 382 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPV 561
Query: 374 YLAVLVEYENGDGDVVQVDLMES 442
Y VLVEY +GDG++VQVDLME+
Sbjct: 562 YFPVLVEY*DGDGNLVQVDLMEA 630
Score = 177 bits (382), Expect = 6e-044
Identities = 77/119 (64%), Positives = 84/119 (70%)
Frame = -1 / -2
Query: 369 GLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG** 190
G +P S WKVT+RPG GTLLNWMSM+P AMAP AVPLRSKW ATG**
Sbjct: 557 GFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG** 378
Query: 189 FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
FMSVM TVS PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PHAPP
Sbjct: 377 FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPP 201
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J13f, mRNA sequence
Length = 656
Score = 277 bits (599), Expect = 7e-074
Identities = 108/139 (77%), Positives = 120/139 (86%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 240 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 419
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VTFH+E+GSNP
Sbjct: 420 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPV 599
Query: 374 YLAVLVEYENGDGDVVQVD 430
Y AVLVEYE+GDGD V VD
Sbjct: 600 YFAVLVEYEDGDGDXVXVD 656
Score = 178 bits (383), Expect = 4e-044
Identities = 78/123 (63%), Positives = 86/123 (69%)
Frame = -1 / -2
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GA 202
A+ G +P S WKVT+RPG GTLLNWMSM+P AMAP AVPLRSKW A
Sbjct: 607 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 428
Query: 201 TG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPH 22
TG**FMSVM TVS PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PH
Sbjct: 427 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPH 248
Query: 21 APP 13
APP
Sbjct: 247 APP 239
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K16f, mRNA sequence
Length = 677
Score = 273 bits (590), Expect = 1e-072
Identities = 107/141 (75%), Positives = 119/141 (84%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 254 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 433
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VT H+E+GSNP
Sbjct: 434 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTXHVEQGSNPV 613
Query: 374 YLAVLVEYENGDGDVVQVDLM 436
Y VLVEY +GD D VQVDLM
Sbjct: 614 YFXVLVEYXDGDXDXVQVDLM 676
Score = 171 bits (369), Expect = 4e-042
Identities = 76/119 (63%), Positives = 83/119 (69%)
Frame = -1 / -3
Query: 369 GLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG** 190
G +P S KVT+RPG GTLLNWMSM+P AMAP AVPLRSKW ATG**
Sbjct: 609 GFDPCSTXKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG** 430
Query: 189 FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
FMSVM TVS PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PHAPP
Sbjct: 429 FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPP 253
>gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL34a7 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 630
Score = 165 bits (355), Expect(2) = 6e-072
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = +2 / +3
Query: 212 HFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLV 391
HFDLSGTAFGAMAK NDELRHAGII++QFKRVPCQYPGLTVTFH+E GSNP Y+A+LV
Sbjct: 3 HFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPCQYPGLTVTFHVEEGSNPFYMAILV 182
Query: 392 EYENGDGDVVQVDLMESSP 448
EYENGDGDV Q+D+MES P
Sbjct: 183 EYENGDGDVKQLDIMESRP 239
Score = 126 bits (269), Expect(2) = 6e-072
Identities = 48/64 (75%), Positives = 53/64 (82%)
Frame = +2 / +3
Query: 461 PTGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSSIV 640
PTG W PM+ESWGSIWRMD P+ GPFSLRVTNESGKTLVADQVI DW+P+ YSS+V
Sbjct: 267 PTGQWVPMKESWGSIWRMDAHHPMHGPFSLRVTNESGKTLVADQVIXGDWKPNKTYSSLV 446
Query: 641 QFE* 652
QF *
Sbjct: 447 QFH* 458
Score = 96.8 bits (205), Expect(2) = 4e-039
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = -1 / -3
Query: 645 NWTMEL*TLSGCQSAGMTWSATSVLPDSLVTRSEKGPCSGRRVSILHMEPQDSRMGSQTP 466
NWT EL* L G QS MTWSATSV PDSLVTR+E GPC G SIL ++P DS MG+ P
Sbjct: 451 NWTREL*VLLGFQSPXMTWSATSVFPDSLVTRNENGPCMGWWASILQIDPHDSFMGTHCP 272
Query: 465 VG 460
VG
Sbjct: 271 VG 266
Score = 84.9 bits (179), Expect(2) = 4e-039
Identities = 38/79 (48%), Positives = 41/79 (51%)
Frame = -1 / -3
Query: 447 GLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXX 268
G DSI A * G +P S W VTV PGYW GTLLN M ++PA
Sbjct: 238 GRDSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSS 59
Query: 267 XXXXSFAMAPKAVPLRSKW 211
AMAPKAVPLRSKW
Sbjct: 58 SLRPYLAMAPKAVPLRSKW 2
>gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010J19f, mRNA sequence
Length = 841
Score = 266 bits (576), Expect = 1e-070
Identities = 103/139 (74%), Positives = 116/139 (83%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 344 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 523
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C++PGL V FH+E GSN
Sbjct: 524 YPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGSNAV 703
Query: 374 YLAVLVEYENGDGDVVQVD 430
Y+A+ VE EN DGD+VQVD
Sbjct: 704 YMAIPVEVENRDGDLVQVD 760
Score = 146 bits (314), Expect = 1e-034
Identities = 68/118 (57%), Positives = 75/118 (63%)
Frame = -1 / -2
Query: 366 LEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**F 187
L+P S W T PG TL+NWMSM+PA A PKAVPLRSKW*GATG**F
Sbjct: 696 LDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**F 517
Query: 186 MSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
MSV+ITVS PEHA +H I * P PLPSL G LP +V+A G FT L P APP
Sbjct: 516 MSVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPP 343
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F12f, mRNA sequence
Length = 669
Score = 218 bits (471), Expect(2) = 4e-069
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 254 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 433
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGL 334
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL
Sbjct: 434 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGL 574
Score = 159 bits (342), Expect = 2e-038
Identities = 70/108 (64%), Positives = 76/108 (70%)
Frame = -1 / -1
Query: 336 VRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSAT 157
+RPG GTLLNWMSM+P AMAP AVPLRSKW ATG**FMSVM TVS
Sbjct: 576 LRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 397
Query: 156 PEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PHAPP
Sbjct: 396 PEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPP 253
Score = 63.4 bits (132), Expect(2) = 4e-069
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2 / +1
Query: 326 PGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVD 430
P VTFH+E+GSNP Y AVLVEY++GDG VVQVD
Sbjct: 565 PWSQVTFHVEQGSNPVYFAVLVEYQDGDGHVVQVD 669
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 260 bits (563), Expect = 6e-069
Identities = 101/130 (77%), Positives = 113/130 (86%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 262 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 441
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VTFH+E+GSNP
Sbjct: 442 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPV 621
Query: 374 YLAVLVEYEN 403
Y AVLVEYE+
Sbjct: 622 YFAVLVEYED 651
Score = 178 bits (383), Expect = 4e-044
Identities = 78/123 (63%), Positives = 86/123 (69%)
Frame = -1 / -1
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GA 202
A+ G +P S WKVT+RPG GTLLNWMSM+P AMAP AVPLRSKW A
Sbjct: 629 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 450
Query: 201 TG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPH 22
TG**FMSVM TVS PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PH
Sbjct: 449 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPH 270
Query: 21 APP 13
APP
Sbjct: 269 APP 261
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N13f, mRNA sequence
Length = 630
Score = 254 bits (550), Expect = 4e-067
Identities = 99/127 (77%), Positives = 110/127 (86%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 249 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 428
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VTFH+E+GSNP
Sbjct: 429 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPV 608
Query: 374 YLAVLVE 394
Y AVLVE
Sbjct: 609 YFAVLVE 629
Score = 178 bits (383), Expect = 4e-044
Identities = 78/123 (63%), Positives = 86/123 (69%)
Frame = -1 / -3
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GA 202
A+ G +P S WKVT+RPG GTLLNWMSM+P AMAP AVPLRSKW A
Sbjct: 616 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 437
Query: 201 TG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPH 22
TG**FMSVM TVS PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PH
Sbjct: 436 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPH 257
Query: 21 APP 13
APP
Sbjct: 256 APP 248
>gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011L08f, mRNA sequence
Length = 544
Score = 171 bits (367), Expect(2) = 5e-067
Identities = 68/92 (73%), Positives = 76/92 (82%)
Frame = +2 / +2
Query: 182 DMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERG 361
DMNYYPVAPYHFDLSGTAFG +AK ND LRH+GIIDI+F RVPC++PGL + FH+E
Sbjct: 2 DMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEY 181
Query: 362 SNPNYLAVLVEYENGDGDVVQVDLMESSPDDG 457
SNP Y AVLVEYE+GDGDVVQVDLMES G
Sbjct: 182 SNPVYFAVLVEYEDGDGDVVQVDLMESRGPGG 277
Score = 104 bits (221), Expect(2) = 5e-067
Identities = 39/66 (59%), Positives = 50/66 (75%)
Frame = +2 / +2
Query: 455 GEPTGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSS 634
G G W MRESWGS+WR+D+ LQ PFS+R+ NESGKTLVA++VIPA+W+P+ Y S
Sbjct: 266 GPGGGKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFYRS 445
Query: 635 IVQFE* 652
VQ+ *
Sbjct: 446 FVQYS* 463
Score = 79.4 bits (167), Expect(2) = 1e-027
Identities = 41/92 (44%), Positives = 46/92 (50%)
Frame = -1 / -2
Query: 456 PSSGLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAX 277
P DS+R TA+* G E S W + PG GT +N MSM+P
Sbjct: 276 PPGPRDSMRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEW 97
Query: 276 XXXXXXXSFAMAPKAVPLRSKW*GATG**FMS 181
FA P AVPLRSKW*GATG**FMS
Sbjct: 96 RSLSLSPGFASLPNAVPLRSKW*GATG**FMS 1
Score = 63.8 bits (133), Expect(2) = 1e-027
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = -3 / -1
Query: 643 LDDGAVDVVGLPVCRNDLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAPGLAHGLP 473
L +GAV+ VG PV R+DLV +RLAGLV DA E L+ GV P GAP L H P
Sbjct: 454 LHEGAVEGVGPPVGRDDLVGDERLAGLVADADGEWRLEAVVGVEAPDGAPRLPHPRP 284
>gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL12B5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 614
Score = 143 bits (306), Expect(2) = 2e-066
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = +2 / -2
Query: 239 GAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDV 418
GAMAK NDELRHAGII++QFKRVPCQYPGLTVTFH+E GSNP Y+A+LVEYENGDGDV
Sbjct: 598 GAMAKYGRNDELRHAGIINMQFKRVPCQYPGLTVTFHVEEGSNPFYMAILVEYENGDGDV 419
Query: 419 VQVDLMESSP 448
Q+D+MES P
Sbjct: 418 KQLDIMESRP 389
Score = 130 bits (278), Expect(2) = 2e-066
Identities = 49/64 (76%), Positives = 54/64 (84%)
Frame = +2 / -2
Query: 461 PTGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSSIV 640
PTG W PM+ESWGSIWRMD P+ GPFSLRVTNESGKTLVADQVIP DW+P+ YSS+V
Sbjct: 361 PTGQWVPMKESWGSIWRMDAHHPMHGPFSLRVTNESGKTLVADQVIPGDWKPNKTYSSLV 182
Query: 641 QFE* 652
QF *
Sbjct: 181 QFH* 170
Score = 100 bits (212), Expect(2) = 1e-033
Identities = 42/62 (67%), Positives = 46/62 (74%)
Frame = -1 / +3
Query: 645 NWTMEL*TLSGCQSAGMTWSATSVLPDSLVTRSEKGPCSGRRVSILHMEPQDSRMGSQTP 466
NWT EL* L G QS GMTWSATSV PDSLVTR+E GPC G SIL ++P DS MG+ P
Sbjct: 177 NWTREL*VLLGFQSPGMTWSATSVFPDSLVTRNENGPCMGWWASILQIDPHDSFMGTHCP 356
Query: 465 VG 460
VG
Sbjct: 357 VG 362
Score = 63.4 bits (132), Expect(2) = 1e-033
Identities = 29/71 (40%), Positives = 33/71 (46%)
Frame = -1 / +3
Query: 447 GLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXX 268
G DSI A * G +P S W VTV PGYW GTLLN M ++PA
Sbjct: 390 GRDSIMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSS 569
Query: 267 XXXXSFAMAPK 235
AMAP+
Sbjct: 570 SLRPYLAMAPR 602
>gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ004_P16 5', mRNA sequence
Length = 500
Score = 158 bits (339), Expect(2) = 3e-066
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = +2 / +2
Query: 209 YHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVL 388
YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VTFH+E+GSNP Y AVL
Sbjct: 2 YHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPVYFAVL 181
Query: 389 VEYENGDGDVVQVDLMESSPDDGEP 463
VEYE+GDGDVVQVDLME++ P
Sbjct: 182 VEYEDGDGDVVQVDLMEANSGTWTP 256
Score = 114 bits (243), Expect(2) = 3e-066
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = +2 / +2
Query: 464 TGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSSIVQ 643
+G W PMRESWGSIWR+D+ LQ PFS+R+TNESGKTLVAD+VIPA+W P Y SIVQ
Sbjct: 239 SGTWTPMRESWGSIWRLDSGHRLQAPFSMRITNESGKTLVADKVIPANWAPSTFYRSIVQ 418
Query: 644 FE* 652
+ *
Sbjct: 419 YS* 427
Score = 81.7 bits (172), Expect(2) = 2e-033
Identities = 37/78 (47%), Positives = 42/78 (53%)
Frame = -1 / -3
Query: 444 LDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXX 265
L S+R TA+ G +P S WKVT+RPG GTLLNWMSM+P
Sbjct: 237 LASMRSTCTTSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFS 58
Query: 264 XXXSFAMAPKAVPLRSKW 211
AMAP AVPLRSKW
Sbjct: 57 LRPGLAMAPNAVPLRSKW 4
Score = 81.3 bits (171), Expect(2) = 2e-033
Identities = 37/57 (64%), Positives = 41/57 (71%)
Frame = -3 / -2
Query: 643 LDDGAVDVVGLPVCRNDLVRHQRLAGLVGDAQREGPLQRPAGVHPPYGAPGLAHGLP 473
LDDGAV+ G PV R+DLV HQRLAGLVGDA EG L+ AGV PP +P LAH P
Sbjct: 418 LDDGAVEGAGRPVGRDDLVGHQRLAGLVGDAHGEGRLEAVAGVQPPD*SPRLAHRRP 248
>gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL8E2 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 546
Score = 164 bits (353), Expect(2) = 2e-064
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = +2 / +1
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 310 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 489
Query: 320 QYPGLTVTFHIERGSNP 370
QYPGLTVTFH+E GSNP
Sbjct: 490 QYPGLTVTFHVEEGSNP 540
Score = 122 bits (260), Expect(2) = 8e-042
Identities = 51/78 (65%), Positives = 55/78 (70%)
Frame = -1 / -2
Query: 369 GLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG** 190
G +P S W VTV PGYW GTLLN M ++PA AMAPKAVPLRSKW* TG *
Sbjct: 539 GFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS* 360
Query: 189 FMSVMITVSATPEHAGWA 136
FMSVMITV TPEHAGW+
Sbjct: 359 FMSVMITVLGTPEHAGWS 306
Score = 102 bits (217), Expect(2) = 2e-064
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 178 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 68.9 bits (144), Expect(2) = 8e-042
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 177
>gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020P05f, mRNA sequence
Length = 615
Score = 246 bits (531), Expect = 2e-064
Identities = 95/124 (76%), Positives = 105/124 (84%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGF N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 243 GGACGFNNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 422
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL VTFH+E GSNP
Sbjct: 423 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGLNVTFHVEXGSNPV 602
Query: 374 YLAV 385
Y AV
Sbjct: 603 YFAV 614
Score = 178 bits (384), Expect = 3e-044
Identities = 78/123 (63%), Positives = 86/123 (69%)
Frame = -1 / -3
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GA 202
A+ G +P S WKVT+RPG GTLLNWMSM+P AMAP AVPLRSKW A
Sbjct: 610 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 431
Query: 201 TG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPH 22
TG**FMSVM TVS PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PH
Sbjct: 430 TG**FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVLLNPH 251
Query: 21 APP 13
APP
Sbjct: 250 APP 242
>gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020K03f, mRNA sequence
Length = 679
Score = 245 bits (529), Expect = 3e-064
Identities = 95/129 (73%), Positives = 108/129 (83%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 248 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 427
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGAMAK +++L H+GIIDIQFKRVPC++PGL VTFH+E+GSNP
Sbjct: 428 YPVAKYHFDLSGTAFGAMAKPGLSEKLPHSGIIDIQFKRVPCEFPGLKVTFHVEQGSNPV 607
Query: 374 YLAVLVEYE 400
Y LV ++
Sbjct: 608 YFPRLVGFQ 634
Score = 172 bits (371), Expect = 2e-042
Identities = 77/119 (64%), Positives = 84/119 (70%)
Frame = -1 / -2
Query: 369 GLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG** 190
GL+P S KVT+RPG GTLLNWMSM+P AMAP AVPLRSKW ATG**
Sbjct: 603 GLDPCST*KVTLRPGNSHGTLLNWMSMMPECGSFSLRPGLAMAPNAVPLRSKWYLATG** 424
Query: 189 FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
FMSVM TVS PE +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PHAPP
Sbjct: 423 FMSVMTTVSGLPEQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPP 247
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 218 bits (471), Expect(2) = 4e-064
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 240 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 419
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGL 334
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL
Sbjct: 420 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGL 560
Score = 156 bits (336), Expect = 1e-037
Identities = 69/106 (65%), Positives = 74/106 (69%)
Frame = -1 / -2
Query: 330 PGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPE 151
PG GTLLNWMSM+P AMAP AVPLRSKW ATG**FMSVM TVS PE
Sbjct: 556 PGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPE 377
Query: 150 HAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
+HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PHAPP
Sbjct: 376 QDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPP 239
Score = 46.9 bits (96), Expect(2) = 4e-064
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2 / +2
Query: 326 PGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSP 448
P V H+E+G NP Y VLVEYE+ D +V VD +++P
Sbjct: 551 PWAQVXLHVEQGYNPVYFTVLVEYEDRDRYLVHVDSWKATP 673
>gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. vulgare cDNA clone HB03G05
5-PRIME, mRNA sequence
Length = 430
Score = 212 bits (457), Expect(2) = 4e-063
Identities = 84/103 (81%), Positives = 93/103 (90%)
Frame = +2 / +1
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 67 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 246
Query: 320 QYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESSP 448
QYPGLTVTFH+E GSNP Y+A+LVEYENGDGDV Q+D+MES P
Sbjct: 247 QYPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESRP 375
Score = 127 bits (271), Expect(2) = 2e-033
Identities = 58/104 (55%), Positives = 62/104 (59%)
Frame = -1 / -3
Query: 447 GLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXX 268
G DSI A * GL+P S W VTV PGYW GTLLN M ++PA
Sbjct: 374 GRDSIMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSS 195
Query: 267 XXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWA 136
AMAPKAVPLRSKW* TG *FMSVMITV TPEHAGW+
Sbjct: 194 SLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAGWS 63
Score = 50.1 bits (103), Expect(2) = 4e-063
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +2 / +1
Query: 80 EPIFKDGKGCGSCYQIRC 133
+P+FKDGKGCGSCYQIRC
Sbjct: 1 QPLFKDGKGCGSCYQIRC 54
Score = 35.4 bits (71), Expect(2) = 2e-033
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 132 HRIW*QDPHPLPSLKIG 82
H IW*Q+P PLPSLK G
Sbjct: 53 HLIW*QEPQPLPSLKSG 3
>gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_H22 5', mRNA sequence
Length = 631
Score = 241 bits (521), Expect = 4e-063
Identities = 93/125 (74%), Positives = 105/125 (84%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PFS+MTSCGN+P+FKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 255 GGACGFKHVNQYPFSSMTSCGNQPLFKDGKGCGSCYQIRCSGDRSCSGNIETVMITDMNY 434
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVA YHFDLSGTAFGA+AK N++LRH+GIIDIQFKRVPC +PGL + FH+ GSN
Sbjct: 435 YPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFKRVPCNFPGLKINFHVVEGSNAV 614
Query: 374 YLAVL 388
YLAVL
Sbjct: 615 YLAVL 629
Score = 166 bits (356), Expect = 2e-040
Identities = 75/123 (60%), Positives = 83/123 (67%)
Frame = -1 / -1
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GA 202
AR LEP + WK+ +RPG GTLLNWMSM+P A APKAVPLRSKW A
Sbjct: 622 ARYTALEPSTTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWA 443
Query: 201 TG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPH 22
TG**FMSV+ITVS PE LHRIW*Q+P PLPSL G LP +V+ EKG FT LKP
Sbjct: 442 TG**FMSVIITVSMLPEQERSPLHRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQ 263
Query: 21 APP 13
APP
Sbjct: 262 APP 254
>gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0810 5-PRIME, mRNA sequence
Length = 638
Score = 197 bits (425), Expect(2) = 7e-063
Identities = 76/106 (71%), Positives = 86/106 (81%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PF++MTSCGN+P+FKDGKGCGSCY+IRC+ +CSG ETVIITDMNY
Sbjct: 204 GGACGFKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNY 383
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPG 331
YPVAPYHFDLSGTAFG +AK ND LRH+GIIDI+F R PG
Sbjct: 384 YPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRGAVGVPG 521
Score = 117 bits (250), Expect = 9e-026
Identities = 58/106 (54%), Positives = 63/106 (59%)
Frame = -1 / -2
Query: 330 PGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPE 151
PG +N MSM+P FA P AVPLRSKW*GATG**FMSVMITVS PE
Sbjct: 520 PGTPTAPRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPE 341
Query: 150 HAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
LH I * +PHPLPSL G LP +V+ G LKP APP
Sbjct: 340 QDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPP 203
Score = 63.8 bits (133), Expect(2) = 7e-063
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +2 / +1
Query: 311 VPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMES 442
VP ++PGL + FH+ S P Y AVLV ++GDGDVVQV LMES
Sbjct: 502 VPWEFPGLKIGFHVXEYSXPVYFAVLVXXQDGDGDVVQVXLMES 633
>gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL66d10 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 539
Score = 158 bits (339), Expect(2) = 1e-062
Identities = 63/76 (82%), Positives = 68/76 (89%)
Frame = +2 / +1
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 310 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 489
Query: 320 QYPGLTVTFHIERGSN 367
QYP LTVTFH+E GSN
Sbjct: 490 QYPXLTVTFHVEEGSN 537
Score = 117 bits (251), Expect(2) = 1e-040
Identities = 50/78 (64%), Positives = 54/78 (69%)
Frame = -1 / -1
Query: 369 GLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG** 190
G +P S W VTV GYW GTLLN M ++PA AMAPKAVPLRSKW* TG *
Sbjct: 539 GFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS* 360
Query: 189 FMSVMITVSATPEHAGWA 136
FMSVMITV TPEHAGW+
Sbjct: 359 FMSVMITVLGTPEHAGWS 306
Score = 102 bits (217), Expect(2) = 1e-062
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 178 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 297
Score = 68.9 bits (144), Expect(2) = 1e-040
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -1
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 296 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 177
>gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL10B12 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 533
Score = 156 bits (336), Expect(2) = 3e-062
Identities = 62/74 (83%), Positives = 67/74 (90%)
Frame = +2 / +3
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 312 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 491
Query: 320 QYPGLTVTFHIERG 361
QYPGLTVTFH+E G
Sbjct: 492 QYPGLTVTFHVEEG 533
Score = 118 bits (252), Expect(2) = 1e-040
Identities = 50/75 (66%), Positives = 53/75 (70%)
Frame = -1 / -2
Query: 360 PRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMS 181
P S W VTV PGYW GTLLN M ++PA AMAPKAVPLRSKW* TG *FMS
Sbjct: 532 PSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMS 353
Query: 180 VMITVSATPEHAGWA 136
VMITV TPEHAGW+
Sbjct: 352 VMITVLGTPEHAGWS 308
Score = 102 bits (217), Expect(2) = 3e-062
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 180 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 299
Score = 68.9 bits (144), Expect(2) = 1e-040
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 298 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 179
>gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C15f, mRNA sequence
Length = 646
Score = 238 bits (514), Expect = 4e-062
Identities = 90/125 (72%), Positives = 104/125 (83%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PF++MTSCGN+P+FKDGKGCGSCY+IRC+ +CSG ETVIITDMNY
Sbjct: 272 GGACGFKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNY 451
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPN 373
YPVAPYHFDLSGTAFG +AK ND LRH+GIIDI+F RVPC++PGL + FH+E SNP
Sbjct: 452 YPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPV 631
Query: 374 YLAVL 388
Y AVL
Sbjct: 632 YFAVL 646
Score = 134 bits (288), Expect = 5e-031
Identities = 66/123 (53%), Positives = 73/123 (59%)
Frame = -1 / -2
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GA 202
A+* G E S W + PG GT +N MSM+P FA P AVPLRSKW*GA
Sbjct: 639 AK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GA 460
Query: 201 TG**FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPH 22
TG**FMSVMITVS PE LH I * +PHPLPSL G LP +V+ G LKP
Sbjct: 459 TG**FMSVMITVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQ 280
Query: 21 APP 13
APP
Sbjct: 279 APP 271
>gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019F11f, mRNA sequence
Length = 759
Score = 216 bits (467), Expect(2) = 6e-062
Identities = 82/107 (76%), Positives = 91/107 (85%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 358 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 537
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGL 334
YPVAPYH DLSGTAFG +AK NDELRHAGIIDIQF RV C++PGL
Sbjct: 538 YPVAPYHLDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGL 678
Score = 134 bits (287), Expect = 7e-031
Identities = 63/106 (59%), Positives = 69/106 (65%)
Frame = -1 / -2
Query: 330 PGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPE 151
PG TL+NWMSM+PA A PKAVPLRSKW*GATG**FMSV+ITVS PE
Sbjct: 674 PGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMSVIITVSCRPE 495
Query: 150 HAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
HA +H I * P PLPSL G LP +V+A G FT L P APP
Sbjct: 494 HALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPP 357
Score = 41.4 bits (84), Expect(2) = 6e-062
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2 / +3
Query: 350 IERGSNPNYLAVLVEYENGDG 412
+E GSN Y+A+LVEYENGDG
Sbjct: 696 LEEGSNAVYMAILVEYENGDG 758
>gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013G22f, mRNA sequence
Length = 488
Score = 154 bits (330), Expect(2) = 2e-061
Identities = 61/72 (84%), Positives = 66/72 (91%)
Frame = +2 / +2
Query: 140 HPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPC 319
HPACSGV +TVIITDMNY PV+ YHFDLSGTAFGAMAK NDELRHAGII++QFKRVPC
Sbjct: 272 HPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINMQFKRVPC 451
Query: 320 QYPGLTVTFHIE 355
QYPGLTVTFH+E
Sbjct: 452 QYPGLTVTFHVE 487
Score = 115 bits (246), Expect(2) = 7e-040
Identities = 49/73 (67%), Positives = 52/73 (71%)
Frame = -1 / -3
Query: 354 SMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVM 175
S W VTV PGYW GTLLN M ++PA AMAPKAVPLRSKW* TG *FMSVM
Sbjct: 486 STWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVM 307
Query: 174 ITVSATPEHAGWA 136
ITV TPEHAGW+
Sbjct: 306 ITVFGTPEHAGWS 268
Score = 102 bits (217), Expect(2) = 2e-061
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRC 133
GGACGFK VN+PPFS+MTSCGN+P+FKDGKGCGSCYQIRC
Sbjct: 140 GGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQIRC 259
Score = 68.9 bits (144), Expect(2) = 7e-040
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -1 / -3
Query: 132 HRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
H IW*Q+P PLPSLK G LP +V+ EKGG T L PHAPP
Sbjct: 258 HLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPP 139
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021G03f, mRNA sequence
Length = 682
Score = 218 bits (471), Expect(2) = 3e-061
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +CSG ETV+ITDMNY
Sbjct: 231 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCSGNPETVVITDMNY 410
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGL 334
YPVA YHFDLSGTAFGAMAK +++LRH+GIIDIQFKRVPC++PGL
Sbjct: 411 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRVPCEFPGL 551
Score = 159 bits (341), Expect(2) = 7e-040
Identities = 70/107 (65%), Positives = 75/107 (70%)
Frame = -1 / -1
Query: 333 RPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATP 154
RPG GTLLNWMSM+P AMAP AVPLRSKW ATG**FMSVM TVS P
Sbjct: 550 RPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLP 371
Query: 153 EHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
E +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PHAPP
Sbjct: 370 EQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPP 230
Score = 37.3 bits (75), Expect(2) = 3e-061
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2 / +2
Query: 326 PGLTVTFHIERGSNPNYLAVLVE 394
P VTFH+E+GSNP Y AVL E
Sbjct: 542 PWSKVTFHVEQGSNPVYFAVLGE 610
Score = 25.4 bits (49), Expect(2) = 7e-040
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1 / -2
Query: 381 AR*LGLEPRSMWKVTVRPG 325
A+ GL+P S WKVT+ G
Sbjct: 597 AKYTGLDPCSTWKVTLDQG 541
>gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007P24f, mRNA sequence
Length = 844
Score = 215 bits (465), Expect(3) = 3e-061
Identities = 84/115 (73%), Positives = 94/115 (81%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PFS+MTSCGNEPIFKDGKGCGSCYQIRC +C ETV+ITDMNY
Sbjct: 253 GGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCTNDQSCFRNPETVVITDMNY 432
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIER 358
YPVA YHFDLSGTAFGAMAK +++LRH+G+IDI FKRVPC++PGL VTF R
Sbjct: 433 YPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGLIDIPFKRVPCEFPGLKVTFQWNR 597
Score = 155 bits (333), Expect = 3e-037
Identities = 70/112 (62%), Positives = 77/112 (68%)
Frame = -1 / -3
Query: 348 WKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMIT 169
WKVT+RPG GTLLN MS+ P AMAP AVPLRSKW ATG**FMSVM T
Sbjct: 587 WKVTLRPGNSHGTLLNGMSIKPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTT 408
Query: 168 VSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
VS + +HRIW*Q+PHPLPSLK+GSLPHDV+ EKG L PHAPP
Sbjct: 407 VSGLRKQDWSLVHRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPP 252
Score = 30.4 bits (60), Expect(3) = 3e-061
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 479 PMRESWGSIWRMDTRRPLQGPF 544
P +SWG I +++R LQGPF
Sbjct: 698 PFTKSWGIILAVESRPRLQGPF 763
Score = 28.1 bits (55), Expect(3) = 3e-061
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 392 EYENGDGDVVQVDLMESS 445
E ++G+ D+VQVDLME++
Sbjct: 627 EVQDGERDLVQVDLMEAN 680
>gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. vulgare cDNA clone HX11A03
5-PRIME, mRNA sequence
Length = 648
Score = 234 bits (506), Expect = 5e-061
Identities = 89/117 (76%), Positives = 99/117 (84%)
Frame = +2 / +1
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 298 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 477
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGS 364
YPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C++PGL V FH+E GS
Sbjct: 478 YPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPGLKVGFHVEEGS 648
Score = 144 bits (310), Expect = 5e-034
Identities = 67/117 (57%), Positives = 74/117 (63%)
Frame = -1 / -2
Query: 363 EPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FM 184
+P S W T PG TL+NWMSM+PA A PKAVPLRSKW*GATG**FM
Sbjct: 647 DPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FM 468
Query: 183 SVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
SV+ITVS PEHA +H I * P PLPSL G LP +V+A G FT L P APP
Sbjct: 467 SVIITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPP 297
>gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_H04 5', mRNA sequence
Length = 612
Score = 231 bits (498), Expect = 6e-060
Identities = 86/119 (72%), Positives = 100/119 (84%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK N PF++MTSCGN+P+FKDGKGCGSCY+IRC+ +CSG ETVIITDMNY
Sbjct: 254 GGACGFKHTNQYPFASMTSCGNQPLFKDGKGCGSCYKIRCRKDQSCSGRTETVIITDMNY 433
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNP 370
YPVAPYHFDLSGTAFG +AK ND LRH+GIIDI+F RVPC++PGL + FH+E SNP
Sbjct: 434 YPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNP 610
Score = 132 bits (282), Expect = 4e-030
Identities = 64/119 (53%), Positives = 70/119 (58%)
Frame = -1 / -1
Query: 369 GLEPRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG** 190
G E S W + PG GT +N MSM+P FA P AVPLRSKW*GATG**
Sbjct: 609 GFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG** 430
Query: 189 FMSVMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
FMSVMITVS PE LH I * +PHPLPSL G LP +V+ G LKP APP
Sbjct: 429 FMSVMITVSVLPEQDWSFLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPP 253
>gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005K24f, mRNA sequence
Length = 812
Score = 158 bits (339), Expect(4) = 1e-059
Identities = 64/83 (77%), Positives = 67/83 (80%)
Frame = +2 / +1
Query: 98 GKGCGSCYQIRCKAHPACSGVAETVIITDMNYYPVAPYHFDLSGTAFGAMAKDEHNDELR 277
G GCGSCYQIRC AH CSGV ETVIITDMNYYPV+ YHFDLSGTAFGAMAKD NDELR
Sbjct: 178 GXGCGSCYQIRCVAHATCSGVPETVIITDMNYYPVSRYHFDLSGTAFGAMAKDGQNDELR 357
Query: 278 HAGIIDIQFKRVPCQYPGLTVTF 346
HAGIID+QFKR P + V F
Sbjct: 358 HAGIIDMQFKRSPTFWHSAFVIF 426
Score = 104 bits (222), Expect(4) = 3e-040
Identities = 49/73 (67%), Positives = 51/73 (69%)
Frame = -1 / -1
Query: 315 GTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMSVMITVSATPEHAGWA 136
G LLN MSM+PA S AMAPKAVPLRSKW* TG**FMSVMITVS TPE A
Sbjct: 395 GDLLNCMSMMPAWRSSSFWPSLAMAPKAVPLRSKW*RDTG**FMSVMITVSGTPEQVA*A 216
Query: 135 LHRIW*QDPHPLP 97
H IW* +PHP P
Sbjct: 215 THLIW*HEPHPSP 177
Score = 68.9 bits (144), Expect(4) = 1e-059
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +2 / +2
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDG 100
GGACGFK VN+PPF+AMTSCGNEP+FK G
Sbjct: 95 GGACGFKNVNLPPFNAMTSCGNEPLFKGG 181
Score = 52.8 bits (109), Expect(4) = 3e-040
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -1 / -3
Query: 99 PSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
P LK GSLPHDV+A GG FT L PHAPP
Sbjct: 180 PPLKSGSLPHDVMALNGGRFTFLNPHAPP 94
Score = 43.2 bits (88), Expect(4) = 3e-040
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1 / -2
Query: 381 AR*LGLEPRSMWKVTVRPGYWQGTL 307
AR* G +P S W VT PGYW GTL
Sbjct: 598 AR*FGFDPCSTWNVTDNPGYWHGTL 524
Score = 35.9 bits (72), Expect(4) = 1e-059
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 422 QVDLMESSPDDGEPTGVW 475
QV LMES P++G+PTG W
Sbjct: 640 QVGLMESGPENGDPTGCW 693
Score = 29.0 bits (57), Expect(4) = 1e-059
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 518 TRRPLQGPFSLRVTNESGKTLVADQ 592
T RPL+GPF + N SG VA +
Sbjct: 732 TPRPLEGPFXCQWRNNSGGGFVASR 806
Score = 25.4 bits (49), Expect(4) = 3e-040
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3 / -1
Query: 583 HQRLAGLVGDAQREGPLQRP 524
H+ G+V +GPLQRP
Sbjct: 797 HEPAPGIVSPLTXKGPLQRP 738
>gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. vulgare cDNA clone HA18P06
5-PRIME, mRNA sequence
Length = 495
Score = 229 bits (494), Expect = 2e-059
Identities = 87/116 (75%), Positives = 97/116 (83%)
Frame = +2 / +3
Query: 14 GGACGFKGVNMPPFSAMTSCGNEPIFKDGKGCGSCYQIRCKAHPACSGVAETVIITDMNY 193
GGACGFK VN PF AMTSCGN+P+FKDGKGCG+CY+I+C H ACSG ETV+ITDMNY
Sbjct: 147 GGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTKHKACSGRQETVMITDMNY 326
Query: 194 YPVAPYHFDLSGTAFGAMAKDEHNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERG 361
YPVAPYHFDLSGTAFG +AK NDELRHAGIIDIQF RV C++P L V FH+E G
Sbjct: 327 YPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRVACEFPELKVGFHVEEG 494
Score = 140 bits (300), Expect = 1e-032
Identities = 66/116 (56%), Positives = 72/116 (62%)
Frame = -1 / -3
Query: 360 PRSMWKVTVRPGYWQGTLLNWMSMIPAXXXXXXXXSFAMAPKAVPLRSKW*GATG**FMS 181
P S W T G TL+NWMSM+PA A PKAVPLRSKW*GATG**FMS
Sbjct: 493 PSSTWNPTFSSGNSHATLVNWMSMMPACRSSSLRPGLASLPKAVPLRSKW*GATG**FMS 314
Query: 180 VMITVSATPEHAGWALHRIW*QDPHPLPSLKIGSLPHDVIAEKGGMFTPLKPHAPP 13
V+ITVS PEHA +H I * P PLPSL G LP +V+A G FT L P APP
Sbjct: 313 VIITVSCRPEHALCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPP 146
>gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. vulgare cDNA clone HA01I15
5-PRIME, mRNA sequence
Length = 396
Score = 130 bits (278), Expect(2) = 9e-059
Identities = 49/61 (80%), Positives = 57/61 (93%)
Frame = +2 / +2
Query: 266 DELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLVEYENGDGDVVQVDLMESS 445
DELRHAGII++QFKRVPCQYPGLTVTFH+E GSNP Y+A+LVEY+NGDGDV Q+D+MES
Sbjct: 11 DELRHAGIINMQFKRVPCQYPGLTVTFHVEEGSNPFYMAILVEYDNGDGDVKQLDIMESR 190
Query: 446 P 448
P
Sbjct: 191 P 193
Score = 117 bits (250), Expect(2) = 9e-059
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = +2 / +2
Query: 461 PTGVWEPMRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSS 634
PTG W PM+ESWGSIWRMD P++GPF LRVTNESGKTLVAD+VIP DW+P+ YSS
Sbjct: 221 PTGEWVPMKESWGSIWRMDAHHPMRGPFWLRVTNESGKTLVADKVIPGDWKPNKTYSS 394
Score = 80.3 bits (169), Expect(2) = 2e-026
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = -1 / -1
Query: 633 EL*TLSGCQSAGMTWSATSVLPDSLVTRSEKGPCSGRRVSILHMEPQDSRMGSQTPVG 460
EL* L G QS GMT SATSV PDSLVTR++ GP G SIL M+P DS MG+ +PVG
Sbjct: 393 EL*VLLGFQSPGMTLSATSVFPDSLVTRNQNGPRMGWWASILQMDPHDSFMGTHSPVG 220
Score = 58.8 bits (122), Expect(2) = 2e-026
Identities = 26/56 (46%), Positives = 29/56 (51%)
Frame = -1 / -1
Query: 447 GLDSIRXXXXXXXXXXXXXXXTAR*LGLEPRSMWKVTVRPGYWQGTLLNWMSMIPA 280
G DSI A * GL+P S W VTV PGYW GTLLN M ++PA
Sbjct: 192 GRDSIMSSCFTSPSPLSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPA 25
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 376,233,367
Number of Sequences: 312970
Number of extensions: 5675078
Number of successful extensions: 82640
Number of sequences better than 1.0e-020: 208
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10568038489
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)