TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4424526.2.1
(1446 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF261083.2|BF261083 HVSMEf0023L11f Hordeum vulgare seedl... 394 e-109
gb|BF628668.2|BF628668 HVSMEb0006P17f Hordeum vulgare seedl... 344 e-106
gb|BQ765117.1|BQ765117 EBca01_SQ005_H22_R carpel, pre-anthe... 380 e-104
gb|BI956291.1|BI956291 HVSMEn0002B06f Hordeum vulgare rachi... 346 e-103
gb|BI960217.1|BI960217 HVSMEn0023M07f Hordeum vulgare rachi... 371 e-102
gb|BI958500.1|BI958500 HVSMEn0015F10f Hordeum vulgare rachi... 365 e-100
gb|BI957720.1|BI957720 HVSMEn0010N21f Hordeum vulgare rachi... 360 1e-098
gb|BI960086.1|BI960086 HVSMEn0023C12f Hordeum vulgare rachi... 354 6e-097
gb|BI959083.1|BI959083 HVSMEn0018B08f Hordeum vulgare rachi... 352 4e-096
gb|CB884147.1|CB884147 HZ65J24r HZ Hordeum vulgare subsp. v... 351 7e-096
gb|BI959923.1|BI959923 HVSMEn0022G10f Hordeum vulgare rachi... 348 3e-095
gb|BI959197.1|BI959197 HVSMEn0018J22f Hordeum vulgare rachi... 339 2e-092
gb|BF622099.1|BF622099 HVSMEa0001M03f Hordeum vulgare seedl... 336 2e-091
gb|BM442407.2|BM442407 EBan01_SQ003_B16_R anther, yellow st... 323 1e-087
gb|BM817239.1|BM817239 HC05A08_T3.ab1 HC Hordeum vulgare su... 323 2e-087
gb|BI960226.1|BI960226 HVSMEn0023M17f Hordeum vulgare rachi... 316 2e-085
gb|BG299638.1|BG299638 HVSMEa0021D13f Hordeum vulgare seedl... 314 1e-084
gb|BE456103.3|BE456103 HVSMEg0019N01f Hordeum vulgare pre-a... 303 1e-081
gb|BI958636.1|BI958636 HVSMEn0016A10f Hordeum vulgare rachi... 286 6e-080
gb|BI960525.1|BI960525 HVSMEn0024O16f Hordeum vulgare rachi... 297 7e-080
gb|BI959822.1|BI959822 HVSMEn0021M05f Hordeum vulgare rachi... 164 3e-078
gb|BI958114.1|BI958114 HVSMEn0013H11f Hordeum vulgare rachi... 290 1e-077
gb|CB882784.1|CB882784 HL02N10w HL Hordeum vulgare subsp. v... 286 2e-076
gb|BI958642.1|BI958642 HVSMEn0016A18f Hordeum vulgare rachi... 215 1e-075
gb|CB884113.1|CB884113 HZ48I06r HZ Hordeum vulgare subsp. v... 277 1e-073
gb|CB884125.1|CB884125 HZ53M12r HZ Hordeum vulgare subsp. v... 277 1e-073
gb|BI958818.1|BI958818 HVSMEn0016M04f Hordeum vulgare rachi... 238 1e-067
gb|CB884134.1|CB884134 HZ58E24r HZ Hordeum vulgare subsp. v... 253 2e-066
gb|BI959118.1|BI959118 HVSMEn0018E05f Hordeum vulgare rachi... 249 3e-065
gb|BG369991.1|BG369991 HVSMEi0026N10f Hordeum vulgare 20 DA... 248 8e-065
gb|BI960244.1|BI960244 HVSMEn0023O09f Hordeum vulgare rachi... 243 2e-063
gb|CA008737.1|CA008737 HU11P01r HU Hordeum vulgare subsp. v... 241 9e-063
gb|BI958722.1|BI958722 HVSMEn0016F18f Hordeum vulgare rachi... 210 5e-062
gb|BF616380.2|BF616380 HVSMEc0007A22f Hordeum vulgare seedl... 171 2e-061
gb|BI956632.1|BI956632 HVSMEn0004H03f Hordeum vulgare rachi... 236 3e-061
gb|BI950646.1|BI950646 HVSMEl0021P05f Hordeum vulgare spike... 199 2e-058
gb|CB884133.1|CB884133 HZ58B01r HZ Hordeum vulgare subsp. v... 221 6e-057
gb|BI957029.1|BI957029 HVSMEn0007B04f Hordeum vulgare rachi... 217 1e-055
gb|BF627283.3|BF627283 HVSMEb0004H03f Hordeum vulgare seedl... 113 1e-054
gb|BU987748.1|BU987748 HF15K13r HF Hordeum vulgare subsp. v... 199 7e-054
gb|BI956898.1|BI956898 HVSMEn0005O18f Hordeum vulgare rachi... 211 8e-054
tpe|BN000696.1| TPA: Hordeum vulgare subsp. vulgare mRNA fo... 130 1e-053
gb|BI958199.1|BI958199 HVSMEn0013N11f Hordeum vulgare rachi... 206 2e-052
gb|BI957292.1|BI957292 HVSMEn0008L02f Hordeum vulgare rachi... 202 5e-051
gb|AW983065.2|AW983065 HVSMEg0004P15f Hordeum vulgare pre-a... 176 1e-050
gb|CB884129.1|CB884129 HZ56F09r HZ Hordeum vulgare subsp. v... 181 1e-044
gb|BI957783.1|BI957783 HVSMEn0011F01f Hordeum vulgare rachi... 164 3e-044
gb|BI958092.1|BI958092 HVSMEn0013F05f Hordeum vulgare rachi... 171 2e-043
gb|BG366389.2|BG366389 HVSMEi0006O04f Hordeum vulgare 20 DA... 163 4e-042
gb|BI958687.1|BI958687 HVSMEn0016D18f Hordeum vulgare rachi... 168 8e-041
gb|BI956210.1|BI956210 HVSMEn0001C12f Hordeum vulgare rachi... 160 2e-038
gb|BI960189.1|BI960189 HVSMEn0023K03f Hordeum vulgare rachi... 158 8e-038
gb|BI957384.1|BI957384 HVSMEn0009E09f Hordeum vulgare rachi... 156 3e-037
gb|BI958892.1|BI958892 HVSMEn0017B01f Hordeum vulgare rachi... 96 3e-036
gb|BE231158.2|BE231158 HVSMEg0017C20f Hordeum vulgare pre-a... 147 1e-034
gb|BG415998.2|BG415998 HVSMEk0009F16f Hordeum vulgare testa... 93 2e-034
gb|BG418653.1|BG418653 HVSMEk0023L18f Hordeum vulgare testa... 130 2e-034
gb|BU968314.1|BU968314 HB07C07r BC Hordeum vulgare subsp. v... 130 2e-034
gb|CA025221.1|CA025221 HZ51I21r HZ Hordeum vulgare subsp. v... 136 8e-034
gb|CA022392.1|CA022392 HZ42P20r HZ Hordeum vulgare subsp. v... 88 4e-033
gb|BG416441.1|BG416441 HVSMEk0012E15f Hordeum vulgare testa... 130 2e-031
gb|AV927308.1|AV927308 AV927308 K. Sato unpublished cDNA li... 134 9e-031
gb|BG415116.2|BG415116 HVSMEk0005D11f Hordeum vulgare testa... 105 4e-028
gb|BG418389.2|BG418389 HVSMEk0022I16f Hordeum vulgare testa... 105 2e-027
gb|BQ472459.1|BQ472459 HB09I02T BC Hordeum vulgare subsp. v... 122 7e-027
gb|BQ472534.1|BQ472534 HB09E04T BC Hordeum vulgare subsp. v... 122 7e-027
gb|CA022456.1|CA022456 HZ43D23r HZ Hordeum vulgare subsp. v... 55 9e-027
gb|BG414934.2|BG414934 HVSMEk0004F02f Hordeum vulgare testa... 76 9e-026
gb|AJ434414.1|AJ434414 AJ434414 S00002 Hordeum vulgare subs... 112 4e-024
gb|AL508986.1|AL508986 AL508986 Hordeum vulgare Barke devel... 93 4e-024
gb|BQ472682.1|BQ472682 HB01M19r BC Hordeum vulgare subsp. v... 112 5e-024
gb|BG415256.1|BG415256 HVSMEk0005M01f Hordeum vulgare testa... 93 5e-024
gb|BU989894.1|BU989894 HF22P23r HF Hordeum vulgare subsp. v... 107 1e-022
gb|BG415915.1|BG415915 HVSMEk0009A14f Hordeum vulgare testa... 91 8e-021
>gb|BF261083.2|BF261083 HVSMEf0023L11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0023L11f, mRNA sequence
Length = 823
Score = 394 bits (855), Expect = e-109
Identities = 161/265 (60%), Positives = 204/265 (76%)
Frame = -1 / +1
Query: 1410 ASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLL 1231
A +S++LV+GGTGY+GR +VAASAR GHPT+ LVRD AP+DPAKAA+L+ F+DAGVT++
Sbjct: 10 AEGRSRVLVIGGTGYIGRFIVAASAREGHPTAVLVRDAAPADPAKAAVLQGFRDAGVTIV 189
Query: 1230 KGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT 1051
KGD+YD SLV+A+K ADVVIS +G Q+ DQ+R++ AIKEAG+VKRFFPSE+G DVDR
Sbjct: 190 KGDMYDHESLVTAIKSADVVISAVGYAQLPDQTRIISAIKEAGHVKRFFPSEYGNDVDRV 369
Query: 1050 GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLG 871
VEP KS+ G K IRRA EA GIPYTY + FFAG LP + Q+ PP +K +++G
Sbjct: 370 HAVEPGKSVFGGKARIRRAIEAEGIPYTYVSSNFFAGRFLPGLAQIGVTEPPTEKVLIMG 549
Query: 870 DGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRR 691
DG+ K VF E D+ TYT+ A DDPR NK LY+KPP+NTLSHNEL+SL EKK GKT R
Sbjct: 550 DGNVKGVFAAEEDVGTYTIKAVDDPRTLNKNLYLKPPSNTLSHNELVSLGEKKLGKTLER 729
Query: 690 EYVPEEAVLKQIQESPIPLNIILAI 616
+PE+ L++IQESP P+N+ L I
Sbjct: 730 VSLPEDEPLEKIQESPAPVNVALGI 804
Score = 192 bits (414), Expect = 4e-048
Identities = 107/260 (41%), Positives = 122/260 (46%)
Frame = +2 / -3
Query: 632 FRGIGDSWICLSTASSGTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAA 811
F G GDS I +SSG + +VLP GG Y LF GSS A
Sbjct: 788 FTGAGDS*IFSRGSSSGRDTLSSVLPSFFSPSETSSLWDKVLLGGFRYRFLFRVLGSSTA 609
Query: 812 STVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAAS 991
V V S S+ T PSP S GG C G+ V*G+P+AS
Sbjct: 608 LIV*VPTSSSAAKTPFTFPSPIMRTFSVGGSVTPICARPGKKRPAKKLEETYV*GIPSAS 429
Query: 992 VARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEM 1171
+AR + P D GST RSTS P SDGKNL T PASL+A R+ S C P+ E+
Sbjct: 428 MARLIRAFPPNTDFPGSTACTRSTSLPYSDGKNLFTCPASLIAEIMRV*SGSCA*PTAEI 249
Query: 1172 TTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAAT 1351
TTSA A+TRL+ SY SPL VTPAS T VGWPSRALAAT
Sbjct: 248 TTSADLMAVTRLS*SYISPLTMVTPASRNPWRTAALAGSAGAASRTRTAVGWPSRALAAT 69
Query: 1352 TCLPRYPVPPTTRILLFSDA 1411
P PVPP T L A
Sbjct: 68 MNRPM*PVPPITNTRLLPSA 9
>gb|BF628668.2|BF628668 HVSMEb0006P17f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0006P17f, mRNA sequence
Length = 714
Score = 344 bits (745), Expect(2) = e-106
Identities = 144/189 (76%), Positives = 160/189 (84%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 65 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 244
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 245 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 424
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 425 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 604
Query: 861 TKAVFVEEG 835
TK F G
Sbjct: 605 TKVFFRRRG 631
Score = 265 bits (573), Expect(2) = 1e-079
Identities = 120/190 (63%), Positives = 127/190 (66%)
Frame = +2 / -1
Query: 836 PSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTL 1015
P LVSPSPR T LS GG G RTCP +G V*GM + S+ARRMP L
Sbjct: 630 PRRRKKTLVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*LATT*V*GMSSPSMARRMPAL 451
Query: 1016 APRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTA 1195
+MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA TA
Sbjct: 450 MAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAALTA 271
Query: 1196 LTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPV 1375
LTRL WSYRSPLRSVTP SWK TSA VGWPSRALAATTCLP PV
Sbjct: 270 LTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM*PV 91
Query: 1376 PPTTRILLFS 1405
PP TRILL +
Sbjct: 90 PPITRILLLA 61
Score = 110 bits (235), Expect(3) = 9e-034
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 409 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 230
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 229 RDARVLEGLEQ 197
Score = 62.9 bits (131), Expect(2) = e-106
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = -1 / +3
Query: 858 KAVFVEEGDIATYTVLAADDPRAENKVLYIKPP 760
K+ FV+E DI YTVLAADDPRAENKVL IKPP
Sbjct: 609 KSSFVDEADIGAYTVLAADDPRAENKVLDIKPP 707
Score = 52.4 bits (108), Expect(2) = 1e-079
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = +2 / -3
Query: 761 GGLMYSTLFSARGSSAASTVYVAMSPSST 847
GGLM STLFSARGSSAA TVY MS SST
Sbjct: 706 GGLMSSTLFSARGSSAARTVYAPMSASST 620
Score = 39.1 bits (79), Expect(3) = 9e-034
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 139 AEPGARRDDVLADVTRPADHKDLAL 65
Score = 38.2 bits (77), Expect(3) = 9e-034
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = +1 / -2
Query: 778 HLVLRARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDL 918
HLV R VV RQ RVR DV L+ E RL R R A G +L
Sbjct: 689 HLVFRTGVVRRQDRVRADVGLVDERRLWSRRRRG*RRCRLGAQGREL 549
>gb|BQ765117.1|BQ765117 EBca01_SQ005_H22_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_H22 5', mRNA sequence
Length = 668
Score = 380 bits (824), Expect = e-104
Identities = 159/204 (77%), Positives = 176/204 (86%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 56 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 235
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 236 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 415
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 416 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 595
Query: 861 TKAVFVEEGDIATYTVLAADDPRA 790
TK VFV+E DI YTVLAADDPRA
Sbjct: 596 TKVVFVDEADIGAYTVLAADDPRA 667
Score = 296 bits (641), Expect = 2e-079
Identities = 135/205 (65%), Positives = 142/205 (69%)
Frame = +2 / -3
Query: 791 ARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV 970
ARGSSAA TVY MS SST T LVSPSPR T LS GG G RTCP +G V
Sbjct: 666 ARGSSAARTVYAPMSASSTKTTLVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*LATT*V 487
Query: 971 *GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAIC 1150
*GM + S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAIC
Sbjct: 486 *GMSSPSMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAIC 307
Query: 1151 IDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWP 1330
I PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA VGWP
Sbjct: 306 IAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWP 127
Query: 1331 SRALAATTCLPRYPVPPTTRILLFS 1405
SRALAATTCLP PVPP TRILL +
Sbjct: 126 SRALAATTCLPM*PVPPITRILLLA 52
Score = 110 bits (235), Expect(3) = 5e-038
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 400 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 221
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 220 RDARVLEGLEQ 188
Score = 52.4 bits (108), Expect(3) = 5e-038
Identities = 26/45 (57%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 790 RARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
R VV RQ VR DV L+ E LG+AVAEDD +V GEDLPD
Sbjct: 667 RTGVVRRQDCVRADVGLVDEDDLGLAVAEDDDVVGWGRRGEDLPD 533
Score = 39.1 bits (79), Expect(3) = 5e-038
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 130 AEPGARRDDVLADVTRPADHKDLAL 56
>gb|BI956291.1|BI956291 HVSMEn0002B06f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0002B06f,
mRNA sequence
Length = 839
Score = 346 bits (750), Expect(3) = e-103
Identities = 145/189 (76%), Positives = 161/189 (85%)
Frame = -1 / +1
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 64 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 243
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 244 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 423
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 424 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 603
Query: 861 TKAVFVEEG 835
TK VF G
Sbjct: 604 TKVVFRRRG 630
Score = 277 bits (599), Expect = 1e-073
Identities = 129/216 (59%), Positives = 136/216 (62%)
Frame = +2 / -1
Query: 758 AGGLMYSTLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRX 937
AGG M ST F G P T LVSPSPR T LS GG G RTCP +G
Sbjct: 707 AGGFMSSTCFPHGGRPPPGRCTRRCRPRRRKTTLVSPSPRMTTLSVGGAGERTCPMVGSE 528
Query: 938 XXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLM 1117
V*GM + S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLM
Sbjct: 527 YPAK*LATT*V*GMSSPSMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLM 348
Query: 1118 ASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXX 1297
A+ S + SAICI PS EMTTSA TALTRL WSYRSPLRSVTP SWK
Sbjct: 347 AAMSLVCSAICIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGA 168
Query: 1298 XXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 167 VSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 60
Score = 110 bits (235), Expect(4) = 2e-036
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 408 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 229
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 228 RDARVLEGLEQ 196
Score = 45.1 bits (92), Expect(3) = e-103
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -1 / +2
Query: 858 KAVFVEEGDIATYTVLAADDPRAENK 781
K+ FV+E DI YT LA DDPRAENK
Sbjct: 608 KSSFVDEADIGAYTGLAGDDPRAENK 685
Score = 39.1 bits (79), Expect(4) = 2e-036
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 138 AEPGARRDDVLADVTRPADHKDLAL 64
Score = 34.5 bits (69), Expect(4) = 2e-036
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +2 / -3
Query: 782 LFSARGSSAASTVYVAMSPSST 847
LFSARGSS A VY MS SST
Sbjct: 684 LFSARGSSPARPVYAPMSASST 619
Score = 32.2 bits (64), Expect(4) = 2e-036
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1 / -3
Query: 859 GVAVAEDDRLVRGRAGGEDLPD 924
G+AVAEDD +V GEDLPD
Sbjct: 606 GLAVAEDDDVVGWGRRGEDLPD 541
Score = 24.4 bits (47), Expect(3) = e-103
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 735 LLSLWEKKTGKTFR 694
L++LWE TG+T R
Sbjct: 728 LVALWENNTGRTSR 769
>gb|BI960217.1|BI960217 HVSMEn0023M07f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023M07f,
mRNA sequence
Length = 636
Score = 371 bits (804), Expect = e-102
Identities = 158/208 (75%), Positives = 174/208 (83%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSK GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTL GD
Sbjct: 11 KSKSRGGGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLGGGD 190
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 191 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 370
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 371 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 550
Query: 861 TKAVFVEEGDIATYTVLAADDPRAENKV 778
TK VFV+E DI YTVLAADDPRAENKV
Sbjct: 551 TKVVFVDEADIGAYTVLAADDPRAENKV 634
Score = 297 bits (642), Expect = 1e-079
Identities = 136/210 (64%), Positives = 144/210 (68%)
Frame = +2 / -1
Query: 776 STLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXX 955
STLFSARGSSAA TVY MS SST T LVSPSPR T LS GG G RTCP +G
Sbjct: 636 STLFSARGSSAARTVYAPMSASSTKTTLVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*L 457
Query: 956 XXXXV*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRL 1135
V*GM + S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S +
Sbjct: 456 ATT*V*GMSSPSMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLV 277
Query: 1136 WSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSA 1315
SAICI PS EMTTSA TALTRL WSYRSP SVTP SWK TSA
Sbjct: 276 CSAICIAPSVEMTTSAALTALTRLPWSYRSPPPSVTPESWKVLSSCALAGSEGAVSRTSA 97
Query: 1316 EVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
VGWPSRALAATTCLP PVPP R+LL +
Sbjct: 96 RVGWPSRALAATTCLPM*PVPPPPRLLLLA 7
Score = 103 bits (219), Expect(3) = 8e-035
Identities = 47/71 (66%), Positives = 55/71 (77%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVA +
Sbjct: 355 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVAPPQ 176
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 175 RDARVLEGLEQ 143
Score = 63.4 bits (132), Expect(3) = 8e-035
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +1 / -3
Query: 778 HLVLRARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
HLV R VV RQ RVR DV L+ E LG+AVAEDD +V GEDLPD
Sbjct: 634 HLVFRTGVVRRQDRVRADVGLVDEDDLGLAVAEDDDVVGWGRRGEDLPD 488
Score = 24.4 bits (47), Expect(3) = 8e-035
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLA 1398
A+P ARR DV A V R A LA
Sbjct: 85 AEPGARRDDVLADVTRPAAPAALA 14
>gb|BI958500.1|BI958500 HVSMEn0015F10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0015F10f,
mRNA sequence
Length = 657
Score = 365 bits (792), Expect = e-100
Identities = 153/198 (77%), Positives = 170/198 (85%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 62 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 241
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 242 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 421
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 422 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 601
Query: 861 TKAVFVEEGDIATYTVLA 808
TK VFV+E DI YTVLA
Sbjct: 602 TKVVFVDEADIGAYTVLA 655
Score = 284 bits (614), Expect = 1e-075
Identities = 129/199 (64%), Positives = 136/199 (68%)
Frame = +2 / -1
Query: 809 ASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAA 988
A TVY MS SST T LVSPSPR T LS GG G RTCP +G V*GM +
Sbjct: 654 ARTVYAPMSASSTKTTLVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*LATT*V*GMSSP 475
Query: 989 SVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTE 1168
S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS E
Sbjct: 474 SMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVE 295
Query: 1169 MTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAA 1348
MTTSA TALTRL WSYRSPLRSVTP SWK TSA VGWPSRALAA
Sbjct: 294 MTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAA 115
Query: 1349 TTCLPRYPVPPTTRILLFS 1405
TTCLP PVPP TRILL +
Sbjct: 114 TTCLPM*PVPPITRILLLA 58
Score = 110 bits (235), Expect(3) = 2e-037
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 406 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 227
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 226 RDARVLEGLEQ 194
Score = 50.1 bits (103), Expect(3) = 2e-037
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +1 / -3
Query: 808 RQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
RQ RVR DV L+ E G+AVAEDD +V GEDLPD
Sbjct: 655 RQDRVRADVGLVDEDDFGLAVAEDDDVVGWGRRGEDLPD 539
Score = 39.1 bits (79), Expect(3) = 2e-037
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 136 AEPGARRDDVLADVTRPADHKDLAL 62
>gb|BI957720.1|BI957720 HVSMEn0010N21f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0010N21f,
mRNA sequence
Length = 660
Score = 360 bits (780), Expect = 1e-098
Identities = 150/195 (76%), Positives = 167/195 (85%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 44 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 223
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 224 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 403
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 404 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 583
Query: 861 TKAVFVEEGDIATYT 817
TK VFV+E DI YT
Sbjct: 584 TKVVFVDEADIGAYT 628
Score = 280 bits (606), Expect = 1e-074
Identities = 127/196 (64%), Positives = 134/196 (68%)
Frame = +2 / -1
Query: 818 VYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVA 997
VY MS SST T LVSPSPR T LS GG G RTCP +G V*GM + S+A
Sbjct: 627 VYAPMSASSTKTTLVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*LATT*V*GMSSPSMA 448
Query: 998 RRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTT 1177
RRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS EMTT
Sbjct: 447 RRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTT 268
Query: 1178 SAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTC 1357
SA TALTRL WSYRSPLRSVTP SWK TSA VGWPSRALAATTC
Sbjct: 267 SAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTC 88
Query: 1358 LPRYPVPPTTRILLFS 1405
LP PVPP TRILL +
Sbjct: 87 LPM*PVPPITRILLLA 40
Score = 110 bits (235), Expect(3) = 6e-037
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 388 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 209
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 208 RDARVLEGLEQ 176
Score = 48.7 bits (100), Expect(3) = 6e-037
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1 / -3
Query: 817 RVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
RVR DV L+ E+ LG+AVAEDD +V GEDLPD
Sbjct: 628 RVRADVGLVDENDLGLAVAEDDDVVGWGRRGEDLPD 521
Score = 39.1 bits (79), Expect(3) = 6e-037
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 118 AEPGARRDDVLADVTRPADHKDLAL 44
>gb|BI960086.1|BI960086 HVSMEn0023C12f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023C12f,
mRNA sequence
Length = 627
Score = 354 bits (768), Expect = 6e-097
Identities = 148/191 (77%), Positives = 165/191 (86%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 48 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 227
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 228 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 407
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 408 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 587
Query: 861 TKAVFVEEGDI 829
TK VFV+E DI
Sbjct: 588 TKVVFVDEADI 620
Score = 275 bits (596), Expect = 3e-073
Identities = 125/192 (65%), Positives = 132/192 (68%)
Frame = +2 / -3
Query: 830 MSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMP 1009
MS SST T LVSPSPR T LS GG G RTCP +G V*GM + S+ARRMP
Sbjct: 619 MSASSTKTTLVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*LATT*V*GMSSPSMARRMP 440
Query: 1010 TLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPF 1189
L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA
Sbjct: 439 ALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAAL 260
Query: 1190 TALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRY 1369
TALTRL WSYRSPLRSVTP SWK TSA VGWPSRALAATTCLP
Sbjct: 259 TALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM* 80
Query: 1370 PVPPTTRILLFS 1405
PVPP TRILL +
Sbjct: 79 PVPPITRILLLA 44
Score = 110 bits (235), Expect(3) = 6e-035
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 392 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 213
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 212 RDARVLEGLEQ 180
Score = 41.8 bits (85), Expect(3) = 6e-035
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +1 / -2
Query: 823 RGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
R DV + E LG+AVAEDD +V GEDLPD
Sbjct: 626 RADVGFVDEDDLGLAVAEDDDVVGWGRRGEDLPD 525
Score = 39.1 bits (79), Expect(3) = 6e-035
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 122 AEPGARRDDVLADVTRPADHKDLAL 48
>gb|BI959083.1|BI959083 HVSMEn0018B08f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0018B08f,
mRNA sequence
Length = 656
Score = 352 bits (762), Expect = 4e-096
Identities = 147/195 (75%), Positives = 165/195 (84%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 62 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 241
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 242 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 421
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 422 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVMLGDGE 601
Query: 861 TKAVFVEEGDIATYT 817
TK VFV++ D T
Sbjct: 602 TKVVFVDQADFGAST 646
Score = 267 bits (578), Expect = 9e-071
Identities = 121/188 (64%), Positives = 128/188 (68%)
Frame = +2 / -3
Query: 842 STNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLAP 1021
ST T LVSPSP T LS GG G RTCP +G V*GM + S+ARRMP L
Sbjct: 621 STKTTLVSPSPSMTTLSVGGAGERTCPMVGSEYPAK*LATT*V*GMSSPSMARRMPALMA 442
Query: 1022 RMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALT 1201
+MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA TALT
Sbjct: 441 KMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAALTALT 262
Query: 1202 RLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPP 1381
RL WSYRSPLRSVTP SWK TSA VGWPSRALAATTCLP PVPP
Sbjct: 261 RLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM*PVPP 82
Query: 1382 TTRILLFS 1405
TRILL +
Sbjct: 81 ITRILLLA 58
Score = 110 bits (235), Expect(3) = 2e-033
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 406 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 227
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 226 RDARVLEGLEQ 194
Score = 39.1 bits (79), Expect(3) = 2e-033
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 136 AEPGARRDDVLADVTRPADHKDLAL 62
Score = 36.8 bits (74), Expect(3) = 2e-033
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1 / -2
Query: 823 RGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
R +V L+ + LG+AVAE D +V GEDLPD
Sbjct: 640 RAEVGLVDKDDLGLAVAEHDDVVGWGRRGEDLPD 539
>gb|CB884147.1|CB884147 HZ65J24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65J24
5-PRIME, mRNA sequence
Length = 567
Score = 351 bits (760), Expect = 7e-096
Identities = 146/189 (77%), Positives = 162/189 (85%)
Frame = -1 / +1
Query: 1293 PSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAI 1114
PSDPAKA LLK+FQD+GVTLLKGDLYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AI
Sbjct: 1 PSDPAKAQLLKTFQDSGVTLLKGDLYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAI 180
Query: 1113 KEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFG 934
KEAGNVKRFFPSEFGLDVDRTG VEPAKSI K GIRRA E IPYTY VA +FAG+
Sbjct: 181 KEAGNVKRFFPSEFGLDVDRTGAVEPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYS 360
Query: 933 LPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPAN 754
LP +GQVL+P PP D V+LGDG+TK VFV+E DI YTVLAADDPRAENKVLYIKPPAN
Sbjct: 361 LPTIGQVLSPAPPTDNVVILGDGETKVVFVDEADIGAYTVLAADDPRAENKVLYIKPPAN 540
Query: 753 TLSHNELLS 727
TLSHNEL++
Sbjct: 541 TLSHNELVA 567
Score = 263 bits (568), Expect = 2e-069
Identities = 119/167 (71%), Positives = 125/167 (74%)
Frame = +2 / -2
Query: 758 AGGLMYSTLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRX 937
AGGLMYSTLFSARGSSAA TVY MS SST T LVSPSPR T LS GG G RTCP +G
Sbjct: 536 AGGLMYSTLFSARGSSAARTVYAPMSASSTKTTLVSPSPRMTTLSVGGAGERTCPMVGSE 357
Query: 938 XXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLM 1117
V*GM + S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLM
Sbjct: 356 YPAK*LATT*V*GMSSPSMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLM 177
Query: 1118 ASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWK 1258
A+ S + SAICI PS EMTTSA TALTRL WSYRSPLRSVTP SWK
Sbjct: 176 AAMSLVCSAICIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWK 36
Score = 110 bits (235), Expect(2) = 1e-035
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -1
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 237 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 58
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 57 RDARVLEGLEQ 25
Score = 63.4 bits (132), Expect(2) = 1e-035
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +1 / -1
Query: 778 HLVLRARVVGRQHRVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
HLV R VV RQ RVR DV L+ E LG+AVAEDD +V GEDLPD
Sbjct: 516 HLVFRTGVVRRQDRVRADVGLVDEDDLGLAVAEDDDVVGWGRRGEDLPD 370
>gb|BI959923.1|BI959923 HVSMEn0022G10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0022G10f,
mRNA sequence
Length = 629
Score = 348 bits (755), Expect = 3e-095
Identities = 145/188 (77%), Positives = 163/188 (86%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 62 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 241
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 242 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 421
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 422 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 601
Query: 861 TKAVFVEE 838
TK VFV++
Sbjct: 602 TKVVFVDD 625
Score = 272 bits (588), Expect = 4e-072
Identities = 123/189 (65%), Positives = 130/189 (68%)
Frame = +2 / -3
Query: 839 SSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLA 1018
SST T LVSPSPR T LS GG G RTCP +G V*GM + S+ARRMP L
Sbjct: 624 SSTKTTLVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*LATT*V*GMSSPSMARRMPALM 445
Query: 1019 PRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTAL 1198
+MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA TAL
Sbjct: 444 AKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAALTAL 265
Query: 1199 TRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVP 1378
TRL WSYRSPLRSVTP SWK TSA VGWPSRALAATTCLP PVP
Sbjct: 264 TRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM*PVP 85
Query: 1379 PTTRILLFS 1405
P TRILL +
Sbjct: 84 PITRILLLA 58
Score = 110 bits (235), Expect(3) = 5e-033
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 406 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 227
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 226 RDARVLEGLEQ 194
Score = 39.1 bits (79), Expect(3) = 5e-033
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 136 AEPGARRDDVLADVTRPADHKDLAL 62
Score = 35.4 bits (71), Expect(3) = 5e-033
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1 / -2
Query: 838 LLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
++ E LG+AVAEDD +V GEDLPD
Sbjct: 625 VVDEDDLGLAVAEDDDVVGWGRRGEDLPD 539
>gb|BI959197.1|BI959197 HVSMEn0018J22f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0018J22f,
mRNA sequence
Length = 646
Score = 339 bits (735), Expect = 2e-092
Identities = 143/195 (73%), Positives = 160/195 (82%)
Frame = -1 / +1
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAP A LLK+F D+GVTLLKGD
Sbjct: 58 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPWGGGXAXLLKTFXDSGVTLLKGD 237
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDV RTG V
Sbjct: 238 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVXRTGAV 417
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 418 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 597
Query: 861 TKAVFVEEGDIATYT 817
TK VFV+E DI YT
Sbjct: 598 TKVVFVDEADIGAYT 642
Score = 270 bits (584), Expect = 1e-071
Identities = 128/203 (63%), Positives = 136/203 (66%)
Frame = +2 / -3
Query: 818 VYVAMSPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVA 997
VY MS SST T LVSPSPR T LS GG G RTCP +G V*GM + S+A
Sbjct: 641 VYAPMSASSTKTTLVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*LATT*V*GMSSPSMA 462
Query: 998 RRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTT 1177
RRMP L +MDLAGST PVR TS PNSDGKNL T PASLMA+ S + SAICI PS EMTT
Sbjct: 461 RRMPALMAKMDLAGSTAPVRXTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTT 282
Query: 1178 SAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTC 1357
SA TALTRL WSYRSPLRSVTP S K TSA VGWPSRALAATTC
Sbjct: 281 SAALTALTRLPWSYRSPLRSVTPESXKVLSXCAXPPPQGAVSRTSARVGWPSRALAATTC 102
Query: 1358 LPRYPVPPTTRILLFSDAIYQSI 1426
LP PVPP TRILL + S+
Sbjct: 101 LPM*PVPPITRILLLASDAMTSL 33
Score = 106 bits (226), Expect(3) = 2e-035
Identities = 48/71 (67%), Positives = 55/71 (77%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 402 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 223
Query: 1237 RHAGVLEALEQ 1269
R A V E EQ
Sbjct: 222 RDARVXEGFEQ 190
Score = 47.8 bits (98), Expect(3) = 2e-035
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +1 / -2
Query: 817 RVRGDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
RVR DV L+ E LG+AVAEDD +V GEDLPD
Sbjct: 642 RVRADVGLVDEDDLGLAVAEDDDVVGWGRRGEDLPD 535
Score = 39.1 bits (79), Expect(3) = 2e-035
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 132 AEPGARRDDVLADVTRPADHKDLAL 58
>gb|BF622099.1|BF622099 HVSMEa0001M03f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0001M03f, mRNA sequence
Length = 608
Score = 336 bits (728), Expect = 2e-091
Identities = 141/182 (77%), Positives = 157/182 (86%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 62 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 241
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 242 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 421
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E I YTY VA +FAG+ LP +GQVL+P PP D V+LGDG+
Sbjct: 422 EPAKSIFAIKAGIRRAIEGEDIXYTYVVANYFAGYSLPTIGQVLSPAPPTDNVVILGDGE 601
Query: 861 TK 856
TK
Sbjct: 602 TK 607
Score = 260 bits (563), Expect = 1e-068
Identities = 118/183 (64%), Positives = 125/183 (68%)
Frame = +2 / -3
Query: 857 LVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLAPRMDLA 1036
LVSPSPR T LS GG G RTCP +G V* M + S+ARRMP L +MDLA
Sbjct: 606 LVSPSPRMTTLSVGGAGERTCPMVGSEYPAK*LATT*V*XMSSPSMARRMPALMAKMDLA 427
Query: 1037 GSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWS 1216
GST PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA TALTRL WS
Sbjct: 426 GSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAALTALTRLPWS 247
Query: 1217 YRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRIL 1396
YRSPLRSVTP SWK TSA VGWPSRALAATTCLP PVPP TRIL
Sbjct: 246 YRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM*PVPPITRIL 67
Query: 1397 LFS 1405
L +
Sbjct: 66 LLA 58
Score = 110 bits (235), Expect(3) = 1e-032
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 406 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 227
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 226 RDARVLEGLEQ 194
Score = 39.1 bits (79), Expect(3) = 1e-032
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 136 AEPGARRDDVLADVTRPADHKDLAL 62
Score = 34.1 bits (68), Expect(3) = 1e-032
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1 / -2
Query: 856 LGVAVAEDDRLVRGRAGGEDLPD 924
LG+AVAEDD +V GEDLPD
Sbjct: 607 LGLAVAEDDDVVGWGRRGEDLPD 539
>gb|BM442407.2|BM442407 EBan01_SQ003_B16_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_B16 5', mRNA sequence
Length = 635
Score = 323 bits (700), Expect = 1e-087
Identities = 130/211 (61%), Positives = 162/211 (76%)
Frame = -1 / +3
Query: 1317 SALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIAD 1138
+ LVRD AP+DPAKAA+L+ F+DAGVT++KGD+YD SLV+A+K ADVVIS +G Q+ D
Sbjct: 3 AVLVRDAAPADPAKAAVLQGFRDAGVTIVKGDMYDHESLVTAIKSADVVISAVGYAQLPD 182
Query: 1137 QSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAV 958
Q+R++ AIKEAG+VKRFFPSE+G DVDR VEP KS+ G K IRRA EA GIPYTY
Sbjct: 183 QTRIISAIKEAGHVKRFFPSEYGNDVDRVHAVEPGKSVFGGKARIRRAIEAEGIPYTYVS 362
Query: 957 AGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKV 778
+ FFAG LP + Q+ PP +K +++GDG+ K VF E D+ TYT+ A DDPR NK+
Sbjct: 363 SNFFAGRFLPGLAQIGVTEPPTEKVLIMGDGNVKGVFAAEEDVGTYTIKAVDDPRTLNKI 542
Query: 777 LYIKPPANTLSHNELLSLWEKKTGKTFRREY 685
LY+KPP+NTLSHNEL+SLWEKK GKT R Y
Sbjct: 543 LYLKPPSNTLSHNELVSLWEKKLGKTLERVY 635
Score = 147 bits (315), Expect = 2e-034
Identities = 79/189 (41%), Positives = 93/189 (49%)
Frame = +2 / -2
Query: 686 YSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAMSPSSTNTALVS 865
Y+ +VLP GG Y LF GSS A V V S S+ T
Sbjct: 634 YTLSSVLPSFFSQSETSSLWDKVLLGGFRYRILFRVLGSSTALIV*VPTSSSAAKTPFTF 455
Query: 866 PSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGST 1045
PSP S GG C G+ V*G+P+AS+AR + P D GST
Sbjct: 454 PSPIMRTFSVGGSVTPICARPGKKRPAKKLEETYV*GIPSASMARLIRAFPPNTDFPGST 275
Query: 1046 MPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRS 1225
RSTS P SDGKNL T PASL+A R+ S C P+ E+TTSA A+TRL+ SY S
Sbjct: 274 ACTRSTSLPYSDGKNLFTCPASLIAEIMRV*SGSCA*PTAEITTSADLMAVTRLS*SYIS 95
Query: 1226 PLRSVTPAS 1252
PL VTPAS
Sbjct: 94 PLTMVTPAS 68
>gb|BM817239.1|BM817239 HC05A08_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC05A08_T3.ab1 similar to 2'-hydroxyisoflavone
reductase,sulfur reductase,, mRNA sequence
Length = 866
Score = 323 bits (699), Expect = 2e-087
Identities = 127/207 (61%), Positives = 159/207 (76%)
Frame = -1 / +3
Query: 1110 EAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGL 931
EAG+VKRFFPSE+G DVDR VEP KS+ G K IRRA EA GIPYTY + FFAG L
Sbjct: 3 EAGHVKRFFPSEYGNDVDRVHAVEPGKSVFGGKARIRRAIEAEGIPYTYVSSNFFAGRFL 182
Query: 930 PKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANT 751
P + Q+ PP +K +++GDG+ K VF E D+ TYT+ A DDPR NK+LY++PP+NT
Sbjct: 183 PGLAQIGVTEPPTEKVLIMGDGNVKGVFAAEEDVGTYTIKAVDDPRTLNKILYLRPPSNT 362
Query: 750 LSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEI 571
LSHNEL+SLWEKK GKT R Y+PE+ +LK+IQESP PLN+ LAI H+ +++G+ T FEI
Sbjct: 363 LSHNELVSLWEKKLGKTLERVYLPEDELLKKIQESPAPLNVALAISHSVWLKGDHTNFEI 542
Query: 570 DPAKGVDASELYPDVKYTTVDEYLNRF 490
DP+ GV+A+ELYPDV Y TVDEYLN+F
Sbjct: 543 DPSFGVEATELYPDVHYITVDEYLNKF 623
Score = 158 bits (340), Expect = 6e-038
Identities = 89/204 (43%), Positives = 101/204 (49%)
Frame = +2 / -2
Query: 500 RYSSTVVYLTSGYSSLASTPLAGSISKPVCSPRTNAACPIARMMFRGIGDSWICLSTASS 679
RYSSTV+ TSG SS+ASTP GSISK V SP IA F G GDS I ++SS
Sbjct: 613 RYSSTVM*CTSG*SSVASTPNDGSISKLVWSPFNQTEWLIASATFSGAGDS*IFFRSSSS 434
Query: 680 GTYSRRNVLPXXXXXXXXXXXXXXXXAGGLMYSTLFSARGSSAASTVYVAMSPSSTNTAL 859
G Y+ +VLP GGL Y LF GSS A V V S S+ T
Sbjct: 433 GRYTLSSVLPSFFSQSETSSLWDKVLLGGLRYRILFRVLGSSTALIV*VPTSSSAAKTPF 254
Query: 860 VSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAG 1039
PSP S GG C G+ V*G+P+AS+AR + P D G
Sbjct: 253 TFPSPIMRTFSVGGSVTPICARPGKKRPAKKLEETYV*GIPSASMARLIRAFPPNTDFPG 74
Query: 1040 STMPVRSTSRPNSDGKNLLTFPAS 1111
ST RSTS P SDGKNL T PAS
Sbjct: 73 STACTRSTSLPYSDGKNLFTCPAS 2
>gb|BI960226.1|BI960226 HVSMEn0023M17f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023M17f,
mRNA sequence
Length = 651
Score = 316 bits (684), Expect = 2e-085
Identities = 135/189 (71%), Positives = 151/189 (79%)
Frame = -1 / +1
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HV+AASARLGHPT ALVRD PSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 64 KSKILVIGGTGYIGKHVLAASARLGHPTLALVRDGGPSDPAKAQLLKTFQDSGVTLLKGD 243
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAV ADVVIS LG+M IA+Q++L+ AI EAGNVKRFFPSEFGLDV RTG V
Sbjct: 244 LYDHGSLVSAVNAADVVISTLGAMHIAEQTKLIAAIIEAGNVKRFFPSEFGLDVYRTGAV 423
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGD 862
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P PP D LGD +
Sbjct: 424 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSPAPPTDNVFSLGDRE 603
Query: 861 TKAVFVEEG 835
TK F G
Sbjct: 604 TKGGFSRPG 630
Score = 249 bits (539), Expect = 2e-065
Identities = 115/190 (60%), Positives = 123/190 (64%)
Frame = +2 / -2
Query: 836 PSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTL 1015
P LVS SPR LS GG G RTCP +G V*GM + S+ARRMP L
Sbjct: 629 PGRLKPPLVSRSPREKTLSVGGAGERTCPMVGSEYPAK*LATT*V*GMSSPSMARRMPAL 450
Query: 1016 APRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTA 1195
+MDLAGST PVR TS PNSDGKNL T PAS+MA+ S + SAICI PS EMTTSA TA
Sbjct: 449 MAKMDLAGSTAPVR*TSSPNSDGKNLFTLPASMMAAMSLVCSAICIAPSVEMTTSAALTA 270
Query: 1196 LTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPV 1375
LTRL WSYRSPLRSVTP SWK TSA VGWPSRALAA TCLP PV
Sbjct: 269 LTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGPPSRTSARVGWPSRALAARTCLPM*PV 90
Query: 1376 PPTTRILLFS 1405
PP TRILL +
Sbjct: 89 PPITRILLLA 60
Score = 105 bits (225), Expect(3) = 1e-029
Identities = 47/71 (66%), Positives = 56/71 (78%)
Frame = +1 / -1
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GL DG DE L+GD+HR++ GDD V ++ AHQA++VVQVALEE
Sbjct: 408 VDVQPELRREEPLHVAGLYDGGDELGLLGDMHRAQRGDDDVGRVNGAHQAAVVVQVALEE 229
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 228 RDARVLEGLEQ 196
Score = 39.6 bits (80), Expect(3) = 1e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 138 AEPGARREDVLADVTRPADHKDLAL 64
Score = 28.1 bits (55), Expect(3) = 1e-029
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 859 GVAVAEDDRLVRGRAGGEDLPD 924
G+AVAE + +V GEDLPD
Sbjct: 606 GLAVAEGENVVGWGRRGEDLPD 541
>gb|BG299638.1|BG299638 HVSMEa0021D13f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0021D13f, mRNA sequence
Length = 569
Score = 314 bits (679), Expect = 1e-084
Identities = 133/174 (76%), Positives = 146/174 (83%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDT PSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 47 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTXPSDPAKAQLLKTFQDSGVTLLKGD 226
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 227 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 406
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAV 880
EPAKSI K GIRRA E IPYTY VA +FA + LP +GQ L P PP D V
Sbjct: 407 EPAKSIFAIKAGIRRAIEGEDIPYTYVVANYFARYSLPTIGQGLLPAPPTDNVV 568
Score = 245 bits (530), Expect = 4e-064
Identities = 112/175 (64%), Positives = 119/175 (68%)
Frame = +2 / -3
Query: 881 TALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGSTMPVRS 1060
T LS GG G R CP +G V*GM + S+ARRMP L +MDLAGST PVRS
Sbjct: 567 TTLSVGGAGRRPCPMVGSEYRAK*LATT*V*GMSSPSMARRMPALMAKMDLAGSTAPVRS 388
Query: 1061 TSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSV 1240
TS PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA TALTRL WSYRSPLRSV
Sbjct: 387 TSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAALTALTRLPWSYRSPLRSV 208
Query: 1241 TPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
TP SWK TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 207 TPESWKVLSSCALAGSEGXVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 43
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 391 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 212
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 211 RDARVLEGLEQ 179
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 121 AEPGARRDDVLADVTRPADHKDLAL 47
>gb|BE456103.3|BE456103 HVSMEg0019N01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019N01f, mRNA sequence
Length = 597
Score = 303 bits (657), Expect = 1e-081
Identities = 129/166 (77%), Positives = 144/166 (86%)
Frame = -1 / +1
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 61 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 240
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAG+VKRF PSEFG DVDRTG V
Sbjct: 241 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGHVKRFXPSEFGADVDRTGAV 420
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAP 904
EPAKSI K GIRRA E IPYTY VA +FAG+ LP +GQVL+P
Sbjct: 421 EPAKSIFRIKAGIRRAIEGEDIPYTYVVANYFAGYSLPTIGQVLSP 558
Score = 236 bits (509), Expect = 3e-061
Identities = 107/167 (64%), Positives = 114/167 (68%)
Frame = +2 / -2
Query: 905 GARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDG 1084
G RTCP +G V*GM + S+ARRMP L +MDLAGST PVRSTS PNSDG
Sbjct: 557 GERTCPMVGSEYPAK*LATT*V*GMSSPSMARRMPALMRKMDLAGSTAPVRSTSAPNSDG 378
Query: 1085 KNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXX 1264
KNL T PASLMA+ S + SAICI PS EMTTSA TALTRL WSYRSPLRSVTP SWK
Sbjct: 377 KNLFTCPASLMAAMSLVCSAICIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVL 198
Query: 1265 XXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 197 SSCALAGSEGAVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 57
Score = 106 bits (227), Expect(2) = 3e-028
Identities = 49/73 (67%), Positives = 55/73 (75%)
Frame = +1 / -1
Query: 1051 RAVHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVAL 1230
R V V ELRR EPL V GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVAL
Sbjct: 411 RTVDVSPELRRXEPLHVPGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVAL 232
Query: 1231 EERHAGVLEALEQ 1269
EER A VLE LEQ
Sbjct: 231 EERDARVLEGLEQ 193
Score = 39.1 bits (79), Expect(2) = 3e-028
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 135 AEPGARRDDVLADVTRPADHKDLAL 61
>gb|BI958636.1|BI958636 HVSMEn0016A10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016A10f,
mRNA sequence
Length = 668
Score = 286 bits (620), Expect(2) = 6e-080
Identities = 125/162 (77%), Positives = 136/162 (83%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 63 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 242
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 243 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 422
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQ 916
EPAKSI K GIRRA PYTY VA A F LP G+
Sbjct: 423 EPAKSIFPIKAGIRRAIGGEDXPYTYVVANXXAWFSLPPWGR 548
Score = 224 bits (484), Expect = 8e-058
Identities = 100/146 (68%), Positives = 106/146 (72%)
Frame = +2 / -2
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*GM + +ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAI
Sbjct: 496 V*GMSSPPMARRMPALMGKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAI 317
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGW 1327
CI PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA VGW
Sbjct: 316 CIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGW 137
Query: 1328 PSRALAATTCLPRYPVPPTTRILLFS 1405
PSRALAATTCLP PVPP TRILL +
Sbjct: 136 PSRALAATTCLPM*PVPPITRILLLA 59
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -1
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 407 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 228
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 227 RDARVLEGLEQ 195
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 137 AEPGARRDDVLADVTRPADHKDLAL 63
Score = 32.2 bits (64), Expect(2) = 6e-080
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / +2
Query: 924 VGQVLAPGPPADKAVVLGDG 865
+GQVL P PP D V+ G G
Sbjct: 539 MGQVLXPAPPTDNVVIXGKG 598
>gb|BI960525.1|BI960525 HVSMEn0024O16f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024O16f,
mRNA sequence
Length = 685
Score = 297 bits (644), Expect = 7e-080
Identities = 127/177 (71%), Positives = 144/177 (81%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTA +PAKA LLK+FQD+GVTLLKGD
Sbjct: 65 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTARVEPAKAQLLKTFQDSGVTLLKGD 244
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDV RTG V
Sbjct: 245 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVXRTGAV 424
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLG 871
EPAKSI K GIRRA I YTY VA +F G+ LP +G VL+P PP + + G
Sbjct: 425 EPAKSIFAIKAGIRRANRGEDIXYTYVVANYFGGYSLPTIGAVLSPAPPPETSSSFG 595
Score = 220 bits (475), Expect = 1e-056
Identities = 98/146 (67%), Positives = 104/146 (71%)
Frame = +2 / -2
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V* M + +ARRMP L +MDLAGST PVR TS PNSDGKNL T PASLMA+ S + SAI
Sbjct: 498 V*XMSSPRLARRMPALMAKMDLAGSTAPVRXTSSPNSDGKNLFTLPASLMAAMSLVCSAI 319
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGW 1327
CI PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA VGW
Sbjct: 318 CIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSTRAVSRTSARVGW 139
Query: 1328 PSRALAATTCLPRYPVPPTTRILLFS 1405
PSRALAATTCLP PVPP TRILL +
Sbjct: 138 PSRALAATTCLPM*PVPPITRILLLA 61
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -1
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 409 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 230
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 229 RDARVLEGLEQ 197
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 139 AEPGARRDDVLADVTRPADHKDLAL 65
>gb|BI959822.1|BI959822 HVSMEn0021M05f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0021M05f,
mRNA sequence
Length = 682
Score = 164 bits (352), Expect(2) = 3e-078
Identities = 72/115 (62%), Positives = 85/115 (73%)
Frame = -1 / +3
Query: 1191 VKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAK 1012
++ ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG VEPAKSI K
Sbjct: 270 LRQADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAVEPAKSIFAIK 449
Query: 1011 VGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVF 847
GIRRA IPYTY VA +FAG+ LP G+VL+ P L G+T+ VF
Sbjct: 450 AGIRRAHRGEDIPYTYVVAHYFAGYSLPPSGKVLSLRPQPKTWSSLATGETRGVF 614
Score = 149 bits (320), Expect(2) = 3e-078
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 59 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 238
Query: 1221 LYDQASLVSAVK 1186
LYD SLVSAVK
Sbjct: 239 LYDHGSLVSAVK 274
Score = 113 bits (242), Expect(3) = 1e-056
Identities = 52/72 (72%), Positives = 56/72 (77%)
Frame = +2 / -1
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*GM + ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAI
Sbjct: 493 V*GMSSPRWARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAI 314
Query: 1148 CIDPSTEMTTSA 1183
CI PS EMTTSA
Sbjct: 313 CIAPSVEMTTSA 278
Score = 112 bits (240), Expect(3) = 1e-056
Identities = 48/72 (66%), Positives = 49/72 (68%)
Frame = +2 / -2
Query: 1190 TALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRY 1369
TALTRL WSYRSPLRSVTP SWK TSA VGWPSRALAATTCLP
Sbjct: 270 TALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM* 91
Query: 1370 PVPPTTRILLFS 1405
PVPP TRILL +
Sbjct: 90 PVPPITRILLLA 55
Score = 68.9 bits (144), Expect(3) = 2e-025
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHV 1179
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V
Sbjct: 404 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDV 282
Score = 46.0 bits (94), Expect(3) = 2e-025
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +1 / -1
Query: 1186 LHRAHQASLVVQVALEERHAGVLEALEQ 1269
L+ AHQA++VVQVALEER A VLE LEQ
Sbjct: 274 LNGAHQAAVVVQVALEERDARVLEGLEQ 191
Score = 39.1 bits (79), Expect(3) = 2e-025
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 133 AEPGARRDDVLADVTRPADHKDLAL 59
Score = 33.1 bits (66), Expect(3) = 1e-056
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2 / -2
Query: 857 LVSPSPRTTALSAGGPGARTCPTLG 931
L PSPR T S GG G CP +G
Sbjct: 603 LSRPSPRMTKFSVGGAGKGPCPMVG 529
>gb|BI958114.1|BI958114 HVSMEn0013H11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0013H11f,
mRNA sequence
Length = 889
Score = 290 bits (628), Expect = 1e-077
Identities = 125/158 (79%), Positives = 137/158 (86%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 66 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 245
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 246 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 425
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLP 928
EPAKSIL K GIRRA E +PYTY + AGF LP
Sbjct: 426 EPAKSILAIKAGIRRAIEG*DMPYTYVGGNYLAGFFLP 539
Score = 222 bits (480), Expect = 3e-057
Identities = 99/144 (68%), Positives = 104/144 (72%)
Frame = +2 / -1
Query: 974 GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICI 1153
GM S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAICI
Sbjct: 493 GMS*PSMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICI 314
Query: 1154 DPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPS 1333
PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA VGWPS
Sbjct: 313 APSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPS 134
Query: 1334 RALAATTCLPRYPVPPTTRILLFS 1405
RALAATTCLP PVPP TRILL +
Sbjct: 133 RALAATTCLPM*PVPPITRILLLA 62
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 410 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 231
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 230 RDARVLEGLEQ 198
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 140 AEPGARRDDVLADVTRPADHKDLAL 66
>gb|CB882784.1|CB882784 HL02N10w HL Hordeum vulgare subsp. vulgare cDNA clone HL02N10
3-PRIME, mRNA sequence
Length = 641
Score = 286 bits (619), Expect = 2e-076
Identities = 116/193 (60%), Positives = 149/193 (77%)
Frame = -1 / +1
Query: 1410 ASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLL 1231
A +S++LV+GGTGY+GR +VAASAR GHPT+ LVRD AP+DPAKAA+L+ F+DAGVT++
Sbjct: 61 AEGRSRVLVIGGTGYIGRFIVAASAREGHPTAVLVRDAAPADPAKAAVLQGFRDAGVTIV 240
Query: 1230 KGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT 1051
KGD+YD SLV+A+K +DVVIS +G Q+ DQ+R++ AIKEAG+VKRFFPSE+G DVDR
Sbjct: 241 KGDMYDHESLVTAIKSSDVVISAVGYAQLPDQTRIISAIKEAGHVKRFFPSEYGNDVDRV 420
Query: 1050 GIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLG 871
VEP KS+ G K IRRA EA GIPYTY + FFAG LP + Q+ PP +K +++G
Sbjct: 421 HAVEPGKSVFGGKARIRRAIEAEGIPYTYVSSNFFAGRFLPGLAQIGVTEPPTEKVLIMG 600
Query: 870 DGDTKAVFVEEGD 832
DG+ K VF E D
Sbjct: 601 DGNVKGVFAAEED 639
Score = 157 bits (338), Expect = 1e-037
Identities = 83/193 (43%), Positives = 95/193 (49%)
Frame = +2 / -1
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPT 1012
S S+ T PSP S GG C G+ V*G+P+AS+AR +
Sbjct: 638 SSSAAKTPFTFPSPIMRTFSVGGSVTPICARPGKKRPAKKLEETYV*GIPSASMARLIRA 459
Query: 1013 LAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFT 1192
P D GST RSTS P SDGKNL T PASL+A R+ S C P+ E+TTS
Sbjct: 458 FPPNTDFPGSTACTRSTSLPYSDGKNLFTCPASLIAEIMRV*SGSCA*PTAEITTSDDLM 279
Query: 1193 ALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYP 1372
A+TRL+ SY SPL VTPAS T VGWPSRALAAT P P
Sbjct: 278 AVTRLS*SYISPLTMVTPASRNPWRTAALAGSAGAASRTRTAVGWPSRALAATMNRPM*P 99
Query: 1373 VPPTTRILLFSDA 1411
VPP T L A
Sbjct: 98 VPPITNTRLLPSA 60
>gb|BI958642.1|BI958642 HVSMEn0016A18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016A18f,
mRNA sequence
Length = 700
Score = 215 bits (463), Expect(2) = 1e-075
Identities = 95/143 (66%), Positives = 108/143 (75%)
Frame = -1 / +3
Query: 1293 PSDPAKAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAI 1114
P P +A LLK+FQD+GVTLLKGDLYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AI
Sbjct: 159 PLRPGRAQLLKTFQDSGVTLLKGDLYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAI 338
Query: 1113 KEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFG 934
KEAGNVKRFFPSEFGLDVDRTG VEPAKSI K GIRRA E +PYTY G++ G
Sbjct: 339 KEAGNVKRFFPSEFGLDVDRTGAVEPAKSIFAIKGGIRRAIEGEDLPYTYGGGGYWGGCS 518
Query: 933 LPKVGQVLAPGPPADKAVVLGDG 865
L GQVL+ P D VL +G
Sbjct: 519 LATRGQVLSAAPATDTCGVLVNG 587
Score = 165 bits (355), Expect(2) = 9e-054
Identities = 73/97 (75%), Positives = 78/97 (80%)
Frame = +2 / -1
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*G + S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAI
Sbjct: 484 V*GKSSPSMARRMPPLMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAI 305
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWK 1258
CI PS EMTTSA TALTRL WSYRSPLRSVTP SWK
Sbjct: 304 CIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWK 194
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 395 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 216
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 215 RDARVLEGLEQ 183
Score = 90.0 bits (190), Expect(2) = 1e-075
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -1 / +1
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDP 1282
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDP
Sbjct: 52 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDP 171
Score = 66.1 bits (138), Expect(2) = 9e-054
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -3
Query: 1307 TSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 146 TSARVGWPSRALAATTCLPM*PVPPITRILLLA 48
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 126 AEPGARRDDVLADVTRPADHKDLAL 52
>gb|CB884113.1|CB884113 HZ48I06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48I06
5-PRIME, mRNA sequence
Length = 510
Score = 277 bits (599), Expect = 1e-073
Identities = 119/145 (82%), Positives = 129/145 (88%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 75 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 254
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 255 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 434
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYT 967
EPAKSI K GIRRA E IPYT
Sbjct: 435 EPAKSIFAIKAGIRRAIEGEDIPYT 509
Score = 227 bits (490), Expect = 1e-058
Identities = 101/146 (69%), Positives = 107/146 (73%)
Frame = +2 / -3
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*GM + S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAI
Sbjct: 508 V*GMSSPSMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAI 329
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGW 1327
CI PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA VGW
Sbjct: 328 CIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGW 149
Query: 1328 PSRALAATTCLPRYPVPPTTRILLFS 1405
PSRALAATTCLP PVPP TRILL +
Sbjct: 148 PSRALAATTCLPM*PVPPITRILLLA 71
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 419 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 240
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 239 RDARVLEGLEQ 207
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 149 AEPGARRDDVLADVTRPADHKDLAL 75
>gb|CB884125.1|CB884125 HZ53M12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53M12
5-PRIME, mRNA sequence
Length = 497
Score = 277 bits (599), Expect = 1e-073
Identities = 119/145 (82%), Positives = 129/145 (88%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 62 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 241
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 242 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 421
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYT 967
EPAKSI K GIRRA E IPYT
Sbjct: 422 EPAKSIFAIKAGIRRAIEGEDIPYT 496
Score = 227 bits (490), Expect = 1e-058
Identities = 101/146 (69%), Positives = 107/146 (73%)
Frame = +2 / -3
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*GM + S+ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAI
Sbjct: 495 V*GMSSPSMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAI 316
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGW 1327
CI PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA VGW
Sbjct: 315 CIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGW 136
Query: 1328 PSRALAATTCLPRYPVPPTTRILLFS 1405
PSRALAATTCLP PVPP TRILL +
Sbjct: 135 PSRALAATTCLPM*PVPPITRILLLA 58
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 406 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 227
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 226 RDARVLEGLEQ 194
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 136 AEPGARRDDVLADVTRPADHKDLAL 62
>gb|BI958818.1|BI958818 HVSMEn0016M04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016M04f,
mRNA sequence
Length = 712
Score = 238 bits (514), Expect(3) = 1e-067
Identities = 101/118 (85%), Positives = 111/118 (94%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 56 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 235
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTG 1048
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG
Sbjct: 236 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTG 409
Score = 189 bits (407), Expect(2) = 3e-049
Identities = 83/119 (69%), Positives = 86/119 (72%)
Frame = +2 / -2
Query: 1049 PVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSP 1228
PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA TALTRL WSYRSP
Sbjct: 408 PVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAALTALTRLPWSYRSP 229
Query: 1229 LRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
LRSVTP SWK TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 228 LRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 52
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -1
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 400 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 221
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 220 RDARVLEGLEQ 188
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 130 AEPGARRDDVLADVTRPADHKDLAL 56
Score = 29.9 bits (59), Expect(3) = 1e-067
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1 / +3
Query: 1044 VEPAKSILGAKVGIRRATEAAGIP 973
VEPAKS+ K G+R A + G P
Sbjct: 414 VEPAKSLFPIKAGVRPAIQGQGHP 485
Score = 28.6 bits (56), Expect(3) = 1e-067
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1 / +1
Query: 978 IPYTYAVAGFFAGFGLPKVGQVLAPGPPADK 886
IPYTY A FAG G+ GP D+
Sbjct: 481 IPYTYVAAKLFAGARSATTGKGXPFGPHRDR 573
Score = 27.2 bits (53), Expect(2) = 3e-049
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2 / -1
Query: 974 GMPAASVARRMPTLAPRMDLAGST 1045
G P +A R P L + DLAGST
Sbjct: 484 GCPCPWMAGRTPALMGKRDLAGST 413
>gb|CB884134.1|CB884134 HZ58E24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58E24
5-PRIME, mRNA sequence
Length = 464
Score = 253 bits (546), Expect = 2e-066
Identities = 108/126 (85%), Positives = 118/126 (93%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 78 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 257
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFGLDVDRTG V
Sbjct: 258 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFGLDVDRTGAV 437
Query: 1041 EPAKSI 1024
EPAKSI
Sbjct: 438 EPAKSI 455
Score = 205 bits (442), Expect = 5e-052
Identities = 90/128 (70%), Positives = 94/128 (73%)
Frame = +2 / -2
Query: 1022 RMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALT 1201
+MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA TALT
Sbjct: 457 KMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAALTALT 278
Query: 1202 RLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPP 1381
RL WSYRSPLRSVTP SWK TSA VGWPSRALAATTCLP PVPP
Sbjct: 277 RLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM*PVPP 98
Query: 1382 TTRILLFS 1405
TRILL +
Sbjct: 97 ITRILLLA 74
Score = 110 bits (235), Expect(2) = 3e-029
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -1
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 422 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 243
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 242 RDARVLEGLEQ 210
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 152 AEPGARRDDVLADVTRPADHKDLAL 78
>gb|BI959118.1|BI959118 HVSMEn0018E05f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0018E05f,
mRNA sequence
Length = 689
Score = 249 bits (538), Expect = 3e-065
Identities = 108/146 (73%), Positives = 122/146 (83%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDP +A LLK+FQD+GVTLLKGD
Sbjct: 62 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPGEAQLLKTFQDSGVTLLKGD 241
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEA NVKRFFPSEFGLDVDRTG V
Sbjct: 242 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAANVKRFFPSEFGLDVDRTGAV 421
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTY 964
+P L ++ GI R G P TY
Sbjct: 422 DPGAPPLPSRRGIGRPLAGPGPPCTY 499
Score = 201 bits (434), Expect = 7e-051
Identities = 92/144 (63%), Positives = 96/144 (66%)
Frame = +2 / -3
Query: 974 GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICI 1153
G P + R MP L GST PVRSTS PNSDGKNL TF ASLMA+ S + SAICI
Sbjct: 489 GGPGPARGRPMPRLEGNGGAPGSTAPVRSTSSPNSDGKNLFTFAASLMAAMSLVCSAICI 310
Query: 1154 DPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPS 1333
PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA VGWPS
Sbjct: 309 APSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCASPGSEGAVSRTSARVGWPS 130
Query: 1334 RALAATTCLPRYPVPPTTRILLFS 1405
RALAATTCLP PVPP TRILL +
Sbjct: 129 RALAATTCLPM*PVPPITRILLLA 58
Score = 109 bits (233), Expect(2) = 5e-029
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 406 VDVQPELRREEPLHVRGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 227
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 226 RDARVLEGLEQ 194
Score = 39.1 bits (79), Expect(2) = 5e-029
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 136 AEPGARRDDVLADVTRPADHKDLAL 62
>gb|BG369991.1|BG369991 HVSMEi0026N10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0026N10f, mRNA sequence
Length = 503
Score = 248 bits (535), Expect = 8e-065
Identities = 102/166 (61%), Positives = 127/166 (76%)
Frame = -1 / +3
Query: 1392 ILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDLYD 1213
+LV+ GTGY+GR +VAASAR GHPT+ LVRD P+DPAKAA+L+ F+DAGVT++KGD+YD
Sbjct: 3 VLVICGTGYIGRFIVAASAREGHPTAVLVRDAEPADPAKAAVLQGFRDAGVTIVKGDMYD 182
Query: 1212 QASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIVEPA 1033
SLV+A+K DVVIS +G Q+ DQ+R++ AIKEAG+VKRFFPSE+G DVDR VEP
Sbjct: 183 HESLVTAIKSTDVVISAVGYAQLPDQTRIISAIKEAGHVKRFFPSEYGNDVDRVHAVEPG 362
Query: 1032 KSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPP 895
KS+ G K I RA EA GIPYTY + FFAG LP + Q+ PP
Sbjct: 363 KSLFGGKARITRAIEAEGIPYTYVSSNFFAGRFLPGLAQIAVTEPP 500
Score = 139 bits (299), Expect = 3e-032
Identities = 73/164 (44%), Positives = 84/164 (51%)
Frame = +2 / -2
Query: 896 GGPGARTCPTLGRXXXXXXXXXXXV*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPN 1075
GG C G+ V*G+P+AS+AR + P D GST RSTS P
Sbjct: 499 GGSVTAICARPGKKRPAKKLEETYV*GIPSASMARVIRAFPPNNDFPGSTACTRSTSLPY 320
Query: 1076 SDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASW 1255
SDGKNL T PASL+A R+ S C P+ E+TTS A+TRL+ SY SPL VTPAS
Sbjct: 319 SDGKNLFTCPASLIAEIMRV*SGSCA*PTAEITTSVDLMAVTRLS*SYISPLTMVTPASR 140
Query: 1256 KXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTT 1387
T VGWPSRALAAT P PVP T
Sbjct: 139 NPWRTAALAGSAGSASRTRTAVGWPSRALAATMNRPM*PVPHIT 8
>gb|BI960244.1|BI960244 HVSMEn0023O09f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0023O09f,
mRNA sequence
Length = 746
Score = 243 bits (525), Expect = 2e-063
Identities = 108/146 (73%), Positives = 118/146 (80%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDT PS LLK+FQD+GVTLLKGD
Sbjct: 123 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTGPSYLGGGRLLKTFQDSGVTLLKGD 302
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
L D SLVSAVK ADV I LG+MQIA+Q++L+ AI EAGNVKRFFPSEFGLDV RTG V
Sbjct: 303 LSDHGSLVSAVKAADVFIFTLGAMQIAEQTKLIAAINEAGNVKRFFPSEFGLDVYRTGAV 482
Query: 1041 EPAKSILGAKVGIRRATEAAGIPYTY 964
EPAKSI K IRRA E IPYTY
Sbjct: 483 EPAKSIFAIKEDIRRAIEGEDIPYTY 560
Score = 150 bits (323), Expect(2) = 2e-049
Identities = 68/97 (70%), Positives = 75/97 (77%)
Frame = +2 / -2
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*GM + S+ARRM +L +MDLAGST PVR TS PNSDGKNL T PASLMA+ S + SAI
Sbjct: 556 V*GMSSPSMARRMSSLMAKMDLAGSTAPVR*TSSPNSDGKNLFTLPASLMAAMSLVCSAI 377
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWK 1258
CI PS +M TSA TALTRL WS RSP RSVTP SWK
Sbjct: 376 CIAPSVKMKTSAALTALTRLPWSDRSPFRSVTPESWK 266
Score = 94.5 bits (200), Expect(2) = 2e-024
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +1 / -1
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GL+DG DE L+GDLHR++ D+ V L+ AHQA++V QVA E
Sbjct: 467 VDVQPELRREEPLHVAGLVDGGDELGLLGDLHRAQREDEDVGRLNGAHQAAVVGQVAF*E 288
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 287 RDARVLEGLEQ 255
Score = 66.1 bits (138), Expect(2) = 2e-049
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -2
Query: 1307 TSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 217 TSARVGWPSRALAATTCLPM*PVPPITRILLLA 119
Score = 39.1 bits (79), Expect(2) = 2e-024
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 197 AEPGARRDDVLADVTRPADHKDLAL 123
>gb|CA008737.1|CA008737 HU11P01r HU Hordeum vulgare subsp. vulgare cDNA clone HU11P01
5-PRIME, mRNA sequence
Length = 487
Score = 241 bits (520), Expect = 9e-063
Identities = 98/149 (65%), Positives = 122/149 (81%)
Frame = -1 / +1
Query: 1410 ASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLL 1231
A +S++LV+GGTGY+GR +VAASAR GHPT+ LVRD AP+DPAKAA+L+ F+DAGVT++
Sbjct: 37 AEGRSRVLVIGGTGYIGRFIVAASAREGHPTAVLVRDAAPADPAKAAVLQGFRDAGVTIV 216
Query: 1230 KGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRT 1051
KGD+YD SLV+A+K ADVVIS +G Q+ DQ+R++ AIKEAG+VKRFFPSE+G DVDR
Sbjct: 217 KGDMYDHESLVTAIKSADVVISAVGYAQLPDQTRIISAIKEAGHVKRFFPSEYGNDVDRV 396
Query: 1050 GIVEPAKSILGAKVGIRRATEAAGIPYTY 964
VEP KS+ G K IRRA EA IPYTY
Sbjct: 397 HAVEPGKSVFGGKARIRRAIEAEXIPYTY 483
Score = 141 bits (303), Expect = 8e-033
Identities = 73/156 (46%), Positives = 85/156 (54%)
Frame = +2 / -3
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*G+ +AS+AR + P D GST RSTS P SDGKNL T PASL+A R+ S
Sbjct: 479 V*GIXSASMARLIRAFPPNTDFPGSTACTRSTSLPYSDGKNLFTCPASLIAEIMRV*SGS 300
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGW 1327
C P+ E+TTSA A+TRL+ SY SPL VTPAS T VGW
Sbjct: 299 CA*PTAEITTSADLMAVTRLS*SYISPLTMVTPASRNPWRTAALAGSAGAASRTRTAVGW 120
Query: 1328 PSRALAATTCLPRYPVPPTTRILLFSDAIYQSITGK 1435
PSRALAAT P PVPP T L A ++ K
Sbjct: 119 PSRALAATMNRPM*PVPPITNTRLLPSAAADAMYSK 12
>gb|BI958722.1|BI958722 HVSMEn0016F18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016F18f,
mRNA sequence
Length = 650
Score = 210 bits (452), Expect(2) = 5e-062
Identities = 90/121 (74%), Positives = 100/121 (82%)
Frame = -1 / +1
Query: 1278 KAALLKSFQDAGVTLLKGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGN 1099
KA LLK+FQD+GVTLLKGDLYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGN
Sbjct: 190 KAQLLKTFQDSGVTLLKGDLYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGN 369
Query: 1098 VKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVG 919
VKRFFPSEFGLDVDRTG VEPAKSI K GIRRA IPYTY VA +FAG+ LP G
Sbjct: 370 VKRFFPSEFGLDVDRTGAVEPAKSIFAIKAGIRRAIRGEDIPYTYVVANYFAGYSLPPSG 549
Query: 918 Q 916
+
Sbjct: 550 R 552
Score = 166 bits (357), Expect(3) = 2e-050
Identities = 73/97 (75%), Positives = 78/97 (80%)
Frame = +2 / -1
Query: 968 V*GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAI 1147
V*GM + +ARRMP L +MDLAGST PVRSTS PNSDGKNL T PASLMA+ S + SAI
Sbjct: 500 V*GMSSPRMARRMPALMAKMDLAGSTAPVRSTSSPNSDGKNLFTLPASLMAAMSLVCSAI 321
Query: 1148 CIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWK 1258
CI PS EMTTSA TALTRL WSYRSPLRSVTP SWK
Sbjct: 320 CIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWK 210
Score = 110 bits (235), Expect(2) = 5e-026
Identities = 50/71 (70%), Positives = 57/71 (80%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 411 VDVQPELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 232
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 231 RDARVLEGLEQ 199
Score = 49.2 bits (101), Expect(2) = 5e-062
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -1 / +3
Query: 930 PKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIA 826
P +GQVL P PP D V+L DG+TK VF++ +A
Sbjct: 537 PTIGQVLFPAPPTDNRVILCDGETKGVFLKRATLA 641
Score = 44.1 bits (90), Expect(3) = 2e-050
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2 / -2
Query: 851 TALVSPSPRTTALSAGGPGARTCPTLG 931
T LVSPS R T LS GG G RTCP +G
Sbjct: 616 TPLVSPSQRITRLSVGGAGKRTCPMVG 536
Score = 31.3 bits (62), Expect(2) = 5e-026
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1 / -1
Query: 826 GDVALLHEHRLGVAVAEDDRLVRGRAGGEDLPD 924
G L E+ LG+ VAED+ +V EDLPD
Sbjct: 641 GQCGPLQENALGLPVAEDNTVVGWGRREEDLPD 543
Score = 28.1 bits (55), Expect(3) = 2e-050
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2 / -2
Query: 1307 TSAEVGWPSRALAATTCLPRYPVPPTTRILL 1399
TSA V W S+ALA TC + P +++ L
Sbjct: 160 TSARVRWQSQALADRTC*RK*SGPAVSQVYL 68
>gb|BF616380.2|BF616380 HVSMEc0007A22f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0007A22f, mRNA sequence
Length = 606
Score = 171 bits (368), Expect(2) = 2e-061
Identities = 73/89 (82%), Positives = 81/89 (91%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPA A LLK+FQD+GVTLLKGD
Sbjct: 45 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPANAPLLKTFQDSGVTLLKGD 224
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQ 1135
LYD SLVSAVK ADVVIS LG+M IA++
Sbjct: 225 LYDHGSLVSAVKAADVVISTLGAMHIAER 311
Score = 141 bits (302), Expect(2) = 1e-050
Identities = 61/89 (68%), Positives = 62/89 (69%)
Frame = +2 / -3
Query: 1139 SAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAE 1318
SAICI PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA
Sbjct: 307 SAICIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSGALAGSEGAVSRTSAR 128
Query: 1319 VGWPSRALAATTCLPRYPVPPTTRILLFS 1405
VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 127 VGWPSRALAATTCLPM*PVPPITRILLLA 41
Score = 85.8 bits (181), Expect(2) = 2e-061
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = -1 / +2
Query: 1134 SRLVDAIKEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIP 973
++L+ IKEAGNVKRFFPSEFGLDVDRTG VEPA SI K RRA G+P
Sbjct: 311 TKLIVGIKEAGNVKRFFPSEFGLDVDRTGAVEPAMSIFDIKAAFRRAIGGQGLP 472
Score = 79.9 bits (168), Expect(2) = 1e-050
Identities = 34/52 (65%), Positives = 38/52 (73%)
Frame = +2 / -1
Query: 974 GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTS 1129
G P +ARR L +MD+AGST PVRSTSRPNSDGKNL T PASLM + S
Sbjct: 471 GSPCPPMARRKAALMSKMDMAGSTAPVRSTSRPNSDGKNLFTLPASLMPTMS 316
Score = 72.5 bits (152), Expect(4) = 4e-025
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = +1 / -2
Query: 1138 VGDLHRSEHGDDHVRALHRAHQASLVVQVALEERHAGVLEALEQ 1269
+GD+HR++ GDD V L+ AHQA++VVQVALEERHA VLE LEQ
Sbjct: 308 LGDMHRAQRGDDDVGRLNGAHQAAVVVQVALEERHARVLEGLEQ 177
Score = 39.6 bits (80), Expect(4) = 4e-025
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1 / -3
Query: 1057 VHVQAELRREEPLDVSGLLDGVDE 1128
V VQAELRR+EP V+GLLD DE
Sbjct: 388 VDVQAELRRKEPFHVAGLLDADDE 317
Score = 39.1 bits (79), Expect(4) = 4e-025
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 119 AEPGARRDDVLADVTRPADHKDLAL 45
Score = 24.9 bits (48), Expect(4) = 4e-025
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 517 GVLDIRVQFAGVHPLGRVDLEARL 588
G LD+ G+H G VD++A L
Sbjct: 439 GRLDVEDGHGGLHGAGTVDVQAEL 368
>gb|BI956632.1|BI956632 HVSMEn0004H03f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0004H03f,
mRNA sequence
Length = 851
Score = 236 bits (509), Expect = 3e-061
Identities = 102/132 (77%), Positives = 116/132 (87%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 11 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 190
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPS FGLDVDR+G
Sbjct: 191 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSGFGLDVDRSGAG 370
Query: 1041 EPAKSILGAKVG 1006
+S +G + G
Sbjct: 371 GAGESRVGMRGG 406
Score = 189 bits (407), Expect(2) = 1e-047
Identities = 84/133 (63%), Positives = 88/133 (66%)
Frame = +2 / -3
Query: 1007 PTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAP 1186
P P D P+RSTS PN DGKNL T PASLMA+ S + SAICI PS EMTTSA
Sbjct: 405 PPRIPTRDSPAPPAPLRSTSSPNPDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAA 226
Query: 1187 FTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPR 1366
TALTRL WSYRSPLRSVTP SWK TSA VGWPSRALAATTCLP
Sbjct: 225 LTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM 46
Query: 1367 YPVPPTTRILLFS 1405
PVPP TRILL +
Sbjct: 45 *PVPPITRILLLA 7
Score = 107 bits (228), Expect(3) = 1e-030
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V VQ E RREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEE
Sbjct: 355 VDVQPEPRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEE 176
Query: 1237 RHAGVLEALEQ 1269
R A VLE LEQ
Sbjct: 175 RDARVLEGLEQ 143
Score = 37.3 bits (75), Expect(3) = 1e-030
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLA 1398
A+P ARR DV A V R ADH+DLA
Sbjct: 85 AEPGARRDDVLADVTRPADHKDLA 14
Score = 27.2 bits (53), Expect(3) = 1e-030
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2 / -2
Query: 980 PAASVARRMPTLAPRMDLAGSTMPVRSTSRP 1072
P S RRMP P LAGS+ P +P
Sbjct: 433 PGPSRPRRMPASHPNTRLAGSSGPATVDVQP 341
Score = 25.4 bits (49), Expect(2) = 1e-047
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2 / -1
Query: 833 SPSSTNTALVSPSPRTTALSAGGPGAR 913
SP T T P+P T A PGAR
Sbjct: 794 SPPPTATTTPPPTPNTPAPLTPRPGAR 714
>gb|BI950646.1|BI950646 HVSMEl0021P05f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0021P05f, mRNA sequence
Length = 547
Score = 199 bits (429), Expect(2) = 2e-058
Identities = 84/111 (75%), Positives = 99/111 (89%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDT PSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 65 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTDPSDPAKAQLLKTFQDSGVTLLKGD 244
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFG 1069
LY+ +LVSAVK ADV IS LG+M IA+Q++L+ AIKEAG+V RFFP ++G
Sbjct: 245 LYNHGNLVSAVKAADVXISTLGAMHIAEQTKLIAAIKEAGHVNRFFPWDWG 397
Score = 166 bits (357), Expect(2) = 7e-048
Identities = 73/113 (64%), Positives = 78/113 (69%)
Frame = +2 / -2
Query: 1067 RPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTP 1246
+P S GKNL T+PASLMA+ S + SAICI PS EM TSA TALTRL W YRSPLRSVTP
Sbjct: 399 QPQSHGKNLFTWPASLMAAMSLVCSAICIAPSVEMXTSAALTALTRLPWLYRSPLRSVTP 220
Query: 1247 ASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
SWK TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 219 ESWKVLSSCALAGSEGSVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 61
Score = 93.2 bits (197), Expect(2) = 1e-023
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = +1 / -1
Query: 1069 AELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEERHAG 1248
A + REEP+ V+GLLDG DE L+GD+HR++ GD V L+ AHQ ++VVQVALEER A
Sbjct: 397 APIPREEPVHVAGLLDGGDELGLLGDMHRAQRGDXDVGRLNGAHQVAVVVQVALEERDAR 218
Query: 1249 VLEALEQ 1269
VLE LEQ
Sbjct: 217 VLEGLEQ 197
Score = 47.8 bits (98), Expect(2) = 2e-058
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = -1 / +1
Query: 1095 KRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAG 979
++ P GLD+DRTG VEPAK I K GIRRA G
Sbjct: 370 EQVLPVGLGLDLDRTGAVEPAKYIFAIKAGIRRAHGGPG 486
Score = 45.5 bits (93), Expect(2) = 7e-048
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +2 / -3
Query: 980 PAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGK 1087
P ARRMP +M LAGST PVRS S PN G+
Sbjct: 485 PGPPWARRMPAFMAKMYLAGSTAPVRSRSSPNPTGR 378
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1 / -1
Query: 1327 AQPRARRHDVPAQVPRAADHQDLA 1398
A+P ARR DV A V R ADH+DLA
Sbjct: 139 AEPGARRDDVLADVTRPADHKDLA 68
>gb|CB884133.1|CB884133 HZ58B01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58B01
5-PRIME, mRNA sequence
Length = 411
Score = 221 bits (478), Expect = 6e-057
Identities = 94/111 (84%), Positives = 104/111 (93%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 78 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 257
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFG 1069
LYD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAGNVKRFFPSEFG
Sbjct: 258 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGNVKRFFPSEFG 410
Score = 176 bits (379), Expect = 3e-043
Identities = 77/112 (68%), Positives = 80/112 (71%)
Frame = +2 / -3
Query: 1070 PNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPA 1249
PNSDGKNL T PASLMA+ S + SAICI PS EMTTSA TALTRL WSYRSPLRSVTP
Sbjct: 409 PNSDGKNLFTLPASLMAAMSLVCSAICIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPE 230
Query: 1250 SWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
SWK TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 229 SWKVLSSCALAGSEGAVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 74
Score = 105 bits (224), Expect(2) = 8e-028
Identities = 47/66 (71%), Positives = 54/66 (81%)
Frame = +1 / -2
Query: 1072 ELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEERHAGV 1251
ELRREEPL V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEER A V
Sbjct: 407 ELRREEPLHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEERDARV 228
Query: 1252 LEALEQ 1269
LE LEQ
Sbjct: 227 LEGLEQ 210
Score = 39.1 bits (79), Expect(2) = 8e-028
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 152 AEPGARRDDVLADVTRPADHKDLAL 78
>gb|BI957029.1|BI957029 HVSMEn0007B04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0007B04f,
mRNA sequence
Length = 854
Score = 217 bits (468), Expect = 1e-055
Identities = 96/134 (71%), Positives = 110/134 (82%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LL +FQD+GVTLL +
Sbjct: 62 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLNTFQDSGVTLLXXN 241
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLV A+K ADVVIS LG+MQIA+Q++L+ AIKEA NVKRFFP EF D DR V
Sbjct: 242 LYDHGSLVIAIKAADVVISTLGAMQIAEQTKLIAAIKEADNVKRFFPPEFKPDFDRWRGV 421
Query: 1041 EPAKSILGAKVGIR 1000
AKS+ G K G+R
Sbjct: 422 *RAKSLFGVKGGVR 463
Score = 167 bits (359), Expect = 1e-040
Identities = 79/138 (57%), Positives = 84/138 (60%)
Frame = +2 / -3
Query: 992 VARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEM 1171
+ R P P D A T RS S NS GKNLLT ASLMA+ S + SAICI PS EM
Sbjct: 471 IXPRTPPFTPNRDFAR*TPRHRSKSGLNSGGKNLLTLSASLMAAMSLVCSAICIAPSVEM 292
Query: 1172 TTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAAT 1351
TTSA A+TRL WSYR LR VTP SWK TSA VGWPSRALAAT
Sbjct: 291 TTSAALMAITRLPWSYRLXLRRVTPESWKVLSSCALAGSEGAVSRTSARVGWPSRALAAT 112
Query: 1352 TCLPRYPVPPTTRILLFS 1405
TCLP PVPP TRILL +
Sbjct: 111 TCLPM*PVPPITRILLLA 58
Score = 93.6 bits (198), Expect(2) = 1e-023
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +1 / -2
Query: 1057 VHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEE 1236
V V+ + RREEPLDV GLLDG DE L+GDLH ++ GDD V L+ HQA++VVQV EE
Sbjct: 406 VEVRLKFRREEPLDVVGLLDGGDELGLLGDLHSAQRGDDDVGRLNGDHQAAVVVQVXXEE 227
Query: 1237 RHAGVLEALEQ 1269
A VLE +EQ
Sbjct: 226 GDARVLEGIEQ 194
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLA 1398
A+P ARR DV A V R ADH+DLA
Sbjct: 136 AEPGARRDDVLADVTRPADHKDLA 65
>gb|BF627283.3|BF627283 HVSMEb0004H03f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0004H03f, mRNA sequence
Length = 770
Score = 113 bits (242), Expect(3) = 1e-054
Identities = 50/114 (43%), Positives = 68/114 (59%)
Frame = -1 / +1
Query: 1044 VEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDG 865
+EP + K+ IRRA E IP+TY A FA + P + Q+ PP +K V G G
Sbjct: 397 LEPGRITFDEKMEIRRAIEERNIPHTYISANCFAAYFAPNLCQMGTLLPPKEKVHVYGYG 576
Query: 864 DTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGK 703
+ KAVF++E DIA YT+ DDP A NK +Y++P N S NEL++ W K +GK
Sbjct: 577 NVKAVFMDEDDIAAYTIKCIDDPLAXNKNIYLRPQXNIPSQNELIAKWGKVSGK 738
Score = 85.8 bits (181), Expect(3) = 1e-054
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = -1 / +1
Query: 1404 EKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKG 1225
+KS++LVVGGTGY+GR +V AS GH T L+R D K +L SF+ G LL+
Sbjct: 19 KKSRVLVVGGTGYIGRRIVKASLAQGHETYVLMRPEIGLDVEKLQMLLSFKAQGARLLEA 198
Query: 1224 DLYDQASLVSAVKGADVVISVLGSM 1150
L D LV+AVK DVV+S + +
Sbjct: 199 SLDDHRGLVAAVKQVDVVVSAMSGV 273
Score = 66.1 bits (138), Expect(3) = 1e-025
Identities = 35/91 (38%), Positives = 37/91 (40%)
Frame = +2 / -1
Query: 1130 RLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXT 1309
RLW C + TTS TA TR WS RS P +
Sbjct: 293 RLWLRKCTPDMADTTTSTCLTAATRPRWSSSDASRSRAPCALNDSSIWSFSTSRPISGLI 114
Query: 1310 SAEVGWPSRALAATTCLPRYPVPPTTRILLF 1402
S V WP LA T LP PVPPTTR LLF
Sbjct: 113 ST*VSWP*AKLAFTILLPM*PVPPTTRTLLF 21
Score = 53.8 bits (111), Expect(3) = 1e-054
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -1 / +1
Query: 1137 QSRLVDAIKEAGNVKRFFPSEFGLDVDRTG 1048
Q +LV+AIKEAGNVKRF PSEFG+D R G
Sbjct: 301 QLKLVEAIKEAGNVKRFLPSEFGMDPARMG 390
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 25/46 (54%), Positives = 25/46 (54%)
Frame = +2 / -1
Query: 764 GLMYSTLFSARGSSAASTVYVAMSPSSTNTALVSPSPRTTALSAGG 901
G Y LF A GSS VY AMS SS NTAL P P T S GG
Sbjct: 677 GRRYMFLFXASGSSMHLIVYAAMSSSSMNTALTLPYP*T*TFSLGG 540
Score = 46.4 bits (95), Expect(3) = 1e-025
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 1049 PVRSTSRPNSDGKNLLTFPASLMASTS 1129
P+ + S PNSDG+ LTFPASLMASTS
Sbjct: 389 PILAGSMPNSDGRKRLTFPASLMASTS 309
>gb|BU987748.1|BU987748 HF15K13r HF Hordeum vulgare subsp. vulgare cDNA clone HF15K13
5-PRIME, mRNA sequence
Length = 475
Score = 199 bits (430), Expect(2) = 7e-054
Identities = 76/133 (57%), Positives = 101/133 (75%)
Frame = -1 / +1
Query: 951 FFAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLY 772
FFAG LP + Q+ PP +K +++GDG+ K VF E D+ TYT+ A DDPR NK+LY
Sbjct: 76 FFAGRFLPGLAQIGVTEPPTEKVLIMGDGNVKGVFAAEEDVGTYTIKAVDDPRTLNKILY 255
Query: 771 IKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRG 592
++PP+NTLSHNEL+SLWEKK GKT R Y+PE+ +LK+IQESP PLN+ LAI H+ +++G
Sbjct: 256 LRPPSNTLSHNELVSLWEKKLGKTLERVYLPEDELLKKIQESPAPLNVALAISHSVWLKG 435
Query: 591 EQTGFEIDPAKGV 553
+ T FEIDP+ GV
Sbjct: 436 DHTNFEIDPSFGV 474
Score = 32.2 bits (64), Expect(2) = 7e-054
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / +2
Query: 1014 KVGIRRATEAAGIPYTY 964
K IRRA EA GIPYTY
Sbjct: 14 KARIRRAIEAEGIPYTY 64
>gb|BI956898.1|BI956898 HVSMEn0005O18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0005O18f,
mRNA sequence
Length = 827
Score = 211 bits (455), Expect = 8e-054
Identities = 91/126 (72%), Positives = 105/126 (83%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVR TA + PAKA LLK+FQD+GVTLLKGD
Sbjct: 62 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRGTAGAXPAKAQLLKTFQDSGVTLLKGD 241
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIV 1042
LYD SLVSAVK ADV IS LG+MQIAD ++L+ AIKEAGNV RFFP+E GLD D G
Sbjct: 242 LYDHGSLVSAVKAADVXISTLGAMQIADXTKLIGAIKEAGNVNRFFPAELGLDGDEAGGC 421
Query: 1041 EPAKSI 1024
+P ++
Sbjct: 422 KPPGAV 439
Score = 180 bits (387), Expect = 2e-044
Identities = 81/123 (65%), Positives = 83/123 (67%)
Frame = +2 / -3
Query: 1037 GSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWS 1216
G P S S PNS GKNL T PASLMA S +WSAICI PS EM TSA TALTRL WS
Sbjct: 426 GLQPPASSPSSPNSAGKNLFTLPASLMAPMSLVWSAICIAPSVEMXTSAALTALTRLPWS 247
Query: 1217 YRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRIL 1396
YRSPLRSVTP SWK TSA VGWPSRALAATTCLP PVPP TRIL
Sbjct: 246 YRSPLRSVTPESWKVLSSCALAGXAPAVPRTSARVGWPSRALAATTCLPM*PVPPITRIL 67
Query: 1397 LFS 1405
L +
Sbjct: 66 LLA 58
Score = 105 bits (225), Expect(2) = 2e-027
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +1 / -2
Query: 1051 RAVHVQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVAL 1230
R V VQ +LRREEP+ V+GLLDG DE VGDLHR++ GD V L+ AHQA++VVQVAL
Sbjct: 412 RFVPVQPQLRREEPVHVAGLLDGADELGXVGDLHRAQRGDXDVGRLNGAHQAAVVVQVAL 233
Query: 1231 EERHAGVLEALEQ 1269
EER A VLE LEQ
Sbjct: 232 EERDARVLEGLEQ 194
Score = 37.3 bits (75), Expect(2) = 2e-027
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = +1 / -2
Query: 1327 AQPRARRHDVPAQVPRAADHQDLA 1398
A+P ARR DV A V R ADH+DLA
Sbjct: 136 AEPGARRDDVLADVTRPADHKDLA 65
>tpe|BN000696.1| TPA: Hordeum vulgare subsp. vulgare mRNA for leucoanthocyanidin
reductase (lar gene)
Length = 1381
Score = 130 bits (279), Expect(3) = 1e-053
Identities = 54/132 (40%), Positives = 79/132 (59%)
Frame = -1 / +3
Query: 900 PPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLW 721
PP D+ + GDG +A FV DI +TV AA D R+ NK ++ +P N LS NE+ LW
Sbjct: 558 PPLDRFQIYGDGTVRAFFVAGTDIGKFTVKAAYDARSVNKAVHFRPACNLLSTNEMACLW 737
Query: 720 EKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASE 541
E K G+T R + +E +L E IP +I+ ++ H F+ G QT F ID ++ ++ S
Sbjct: 738 ESKIGRTLPRVTLSKEELLAMAAEDIIPESIVASLTHDIFINGCQTNFGIDGSRDIEISS 917
Query: 540 LYPDVKYTTVDE 505
LYPD+ + T+DE
Sbjct: 918 LYPDIPFRTIDE 953
Score = 92.7 bits (196), Expect(3) = 1e-053
Identities = 43/83 (51%), Positives = 50/83 (60%)
Frame = -1 / +3
Query: 1185 GADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVG 1006
G +VVISV+G I DQ L+ AI+ AG VKRF PSEFG DVDR V K
Sbjct: 273 GIEVVISVMGGANILDQLGLIKAIQAAGTVKRFLPSEFGHDVDRARPVGAGLGFYEEKRR 452
Query: 1005 IRRATEAAGIPYTYAVAGFFAGF 937
+RRA EAAG+PYTY AG+
Sbjct: 453 VRRAAEAAGVPYTYICCNSIAGW 521
Score = 33.6 bits (67), Expect(3) = 1e-053
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1 / +3
Query: 1389 LVVGGTGYLGRHVVAASARLGHPTSALVR 1303
L+VG TGY+GR V A G T LVR
Sbjct: 57 LIVGATGYIGRFVAEACLDSGRRTFILVR 143
>gb|BI958199.1|BI958199 HVSMEn0013N11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0013N11f,
mRNA sequence
Length = 922
Score = 206 bits (445), Expect = 2e-052
Identities = 87/111 (78%), Positives = 100/111 (90%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPS+P KA LLK+FQD+GVTLLKGD
Sbjct: 63 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSEPGKAQLLKTFQDSGVTLLKGD 242
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFG 1069
LYD SLVSAVK ADVVIS LG+MQIA+ + L+ AI+EAGNV RFFP+E+G
Sbjct: 243 LYDHGSLVSAVKAADVVISTLGAMQIAEHTELMGAIEEAGNVNRFFPTEWG 395
Score = 166 bits (356), Expect = 4e-040
Identities = 74/112 (66%), Positives = 77/112 (68%)
Frame = +2 / -1
Query: 1070 PNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPA 1249
P+S GKNL T PAS MA S + SAICI PS EMTTSA TALTRL WSYRSPLRSVTP
Sbjct: 394 PHSVGKNLFTLPASSMAPMSSVCSAICIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPE 215
Query: 1250 SWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
SWK TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 214 SWKVLSSCALPGSEGAVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 59
Score = 95.5 bits (202), Expect(2) = 8e-025
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +1 / -3
Query: 1075 LRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEERHAGVL 1254
L REEP+ V+GLLDG E ++GDLHR++ GDD V L+ AHQA++VVQVALEER A VL
Sbjct: 389 LGREEPVHVAGLLDGAHELGVLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEERDARVL 210
Query: 1255 EALEQ 1269
E LEQ
Sbjct: 209 EGLEQ 195
Score = 39.1 bits (79), Expect(2) = 8e-025
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLAL
Sbjct: 137 AEPGARRDDVLADVTRPADHKDLAL 63
>gb|BI957292.1|BI957292 HVSMEn0008L02f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0008L02f,
mRNA sequence
Length = 593
Score = 202 bits (435), Expect = 5e-051
Identities = 86/106 (81%), Positives = 97/106 (91%)
Frame = -1 / +1
Query: 1398 SKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGDL 1219
SKILV+GGTGY+G+HVVAASARLGHPT ALVRDT PSDPAKA LLK+FQD+GVTLLKGDL
Sbjct: 55 SKILVIGGTGYIGKHVVAASARLGHPTLALVRDTXPSDPAKAQLLKTFQDSGVTLLKGDL 234
Query: 1218 YDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFP 1081
YD SLVSAVK ADVVIS LG+MQIA+Q++L+ AIKEAG+VKR FP
Sbjct: 235 YDHGSLVSAVKAADVVISTLGAMQIAEQTKLIAAIKEAGHVKRSFP 372
Score = 166 bits (358), Expect = 2e-040
Identities = 75/120 (62%), Positives = 82/120 (68%)
Frame = +2 / -1
Query: 1046 MPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRS 1225
+P +P GK+L T+PASLMA+ S + SAICI PS EMTTSA TALTRL WSYRS
Sbjct: 407 VPRAGXCQPEIRGKDLFTWPASLMAAMSLVCSAICIAPSVEMTTSAALTALTRLPWSYRS 228
Query: 1226 PLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
PLRSVTP SWK TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 227 PLRSVTPESWKVLSSCALAGSEGXVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 48
Score = 96.4 bits (204), Expect(2) = 1e-024
Identities = 44/69 (63%), Positives = 51/69 (73%)
Frame = +1 / -3
Query: 1063 VQAELRREEPLDVSGLLDGVDEPALVGDLHRSEHGDDHVRALHRAHQASLVVQVALEERH 1242
V A RE P V+GLLDG DE L+GDLHR++ GDD V L+ AHQA++VVQVALEER
Sbjct: 390 VSARNPRERPFHVAGLLDGGDELGLLGDLHRAQRGDDDVGRLNGAHQAAVVVQVALEERD 211
Query: 1243 AGVLEALEQ 1269
A VLE LEQ
Sbjct: 210 ARVLEGLEQ 184
Score = 37.7 bits (76), Expect(2) = 1e-024
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1 / -3
Query: 1327 AQPRARRHDVPAQVPRAADHQDLAL 1401
A+P ARR DV A V R ADH+DLA+
Sbjct: 126 AEPGARRDDVLADVTRPADHKDLAV 52
>gb|AW983065.2|AW983065 HVSMEg0004P15f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004P15f, mRNA sequence
Length = 612
Score = 176 bits (379), Expect(2) = 1e-050
Identities = 76/102 (74%), Positives = 85/102 (83%)
Frame = -1 / +1
Query: 1410 ASEKSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLL 1231
A KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDT PSDPAKA LLK+FQD+GVTLL
Sbjct: 52 ADAKSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTGPSDPAKAQLLKTFQDSGVTLL 231
Query: 1230 KGDLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEA 1105
KGDLYD SLVSA K DVVI LG +QI Q++L+ IKEA
Sbjct: 232 KGDLYDHGSLVSACKAGDVVIFTLGPIQIGRQTKLIGGIKEA 357
Score = 124 bits (266), Expect(2) = 8e-037
Identities = 60/102 (58%), Positives = 63/102 (61%)
Frame = +2 / -2
Query: 1106 ASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXX 1285
ASLM S + I I PS +MTTS ALTRL WSYRSPLRSVTP S K
Sbjct: 356 ASLMPPMSLVCRPI*IGPSVKMTTSPALQALTRLPWSYRSPLRSVTPES*KVLSSCALAG 177
Query: 1286 XXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFSDA 1411
TSA VGWPSRALAATTCLP PVPP TRILL + A
Sbjct: 176 SEGPVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLASA 51
Score = 50.1 bits (103), Expect(2) = 8e-037
Identities = 24/42 (57%), Positives = 25/42 (59%)
Frame = +2 / -3
Query: 974 GMPAASVARRMPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLT 1099
G P A R P L +MD A T PVR TS PNSDGK LLT
Sbjct: 490 GCPRPQWAGRTPALMAKMD*AVYTAPVRLTSSPNSDGKELLT 365
Score = 44.6 bits (91), Expect(2) = 1e-050
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -1 / +3
Query: 1113 KEAGNVKRFFPSEFGLDVDRTGIVEPAKSILGAKVGIRRATEAAGIP 973
+ V+ FPSEFGLDV+RTG V A SI K G+ A G P
Sbjct: 351 RSPATVRSSFPSEFGLDVNRTGAV*TA*SIFAIKAGVLPAH*GRGHP 491
>gb|CB884129.1|CB884129 HZ56F09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ56F09
5-PRIME, mRNA sequence
Length = 343
Score = 181 bits (389), Expect = 1e-044
Identities = 77/92 (83%), Positives = 86/92 (93%)
Frame = -1 / +2
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPSDPAKA LLK+FQD+GVTLLKGD
Sbjct: 68 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSDPAKAQLLKTFQDSGVTLLKGD 247
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRL 1126
LYD SLVSAVK ADVVIS LG+MQIA+Q++L
Sbjct: 248 LYDHGSLVSAVKAADVVISTLGAMQIAEQTKL 343
Score = 141 bits (302), Expect = 1e-032
Identities = 62/93 (66%), Positives = 64/93 (68%)
Frame = +2 / -2
Query: 1127 SRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXX 1306
S + SAICI PS EMTTSA TALTRL WSYRSPLRSVTP SWK
Sbjct: 342 SLVCSAICIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCALAGSEGAVSR 163
Query: 1307 TSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 162 TSARVGWPSRALAATTCLPM*PVPPITRILLLA 64
>gb|BI957783.1|BI957783 HVSMEn0011F01f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0011F01f,
mRNA sequence
Length = 930
Score = 164 bits (353), Expect(2) = 3e-044
Identities = 71/87 (81%), Positives = 78/87 (89%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAPS +A LLK+FQD+GVTLLKGD
Sbjct: 54 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPSGAGRAQLLKTFQDSGVTLLKGD 233
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIA 1141
LYD SLVSAVK ADVVIS LG+MQIA
Sbjct: 234 LYDHGSLVSAVKAADVVISTLGAMQIA 314
Score = 137 bits (294), Expect(2) = 4e-035
Identities = 60/88 (68%), Positives = 61/88 (69%)
Frame = +2 / -3
Query: 1142 AICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEV 1321
AICI PS EMTTSA TALTRL WSYRSPLRSVTP SWK TSA V
Sbjct: 313 AICIAPSVEMTTSAALTALTRLPWSYRSPLRSVTPESWKVLSSCARPAPEGAVSRTSARV 134
Query: 1322 GWPSRALAATTCLPRYPVPPTTRILLFS 1405
GWPSRALAATTCLP PVPP TRILL +
Sbjct: 133 GWPSRALAATTCLPM*PVPPITRILLLA 50
Score = 35.0 bits (70), Expect(2) = 3e-044
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -1 / +1
Query: 1140 DQSRLVDAIKEAGNVKRFFPSEFGLD 1063
+Q++++ I+EAG+VKRFFP LD
Sbjct: 316 EQTKVIARIEEAGDVKRFFPGGVRLD 393
Score = 31.8 bits (63), Expect(2) = 4e-035
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1 / -1
Query: 1063 VQAELRREEPLDVSGLLDGVDEPALV 1140
VQ + REEPL V+GLLD D+ L+
Sbjct: 393 VQPDSPREEPLHVAGLLDARDDLGLL 316
>gb|BI958092.1|BI958092 HVSMEn0013F05f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0013F05f,
mRNA sequence
Length = 852
Score = 171 bits (368), Expect(2) = 2e-043
Identities = 76/111 (68%), Positives = 90/111 (81%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVR+T PSDPAKA LLK+FQD+GVTLL+GD
Sbjct: 63 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRETGPSDPAKAQLLKTFQDSGVTLLRGD 242
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRFFPSEFG 1069
L D SLVSAVK ADV++ LG+M+I SRL+ A K+ G +R F E G
Sbjct: 243 LCDHRSLVSAVKAADVLMGGLGAMRIGRASRLLAARKKGGRGRRGFGGEGG 395
Score = 134 bits (287), Expect = 1e-030
Identities = 67/134 (50%), Positives = 73/134 (54%)
Frame = +2 / -3
Query: 1004 MPTLAPRMDLAGSTMPVRSTSRPNSDGKNLLTFPASLMASTSRLWSAICIDPSTEMTTSA 1183
+P + P P + P S LL P A+ SRL I I PS M TSA
Sbjct: 460 LPPVTPPAPSPPPPPPPQCPLPPPSPPNPLLPRPPFFRAARSRLARPIRIAPSPPMRTSA 281
Query: 1184 PFTALTRLAWSYRSPLRSVTPASWKXXXXXXXXXXXXXXXXTSAEVGWPSRALAATTCLP 1363
TALTRL WS+RSPLRSVTP SWK TSA VGWPSRALAATTCLP
Sbjct: 280 ALTALTRLRWSHRSPLRSVTPESWKVLSSCALAGSEGPVSRTSARVGWPSRALAATTCLP 101
Query: 1364 RYPVPPTTRILLFS 1405
PVPP TRILL +
Sbjct: 100 M*PVPPITRILLLA 59
Score = 29.0 bits (57), Expect(2) = 2e-043
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3 / +3
Query: 700 VPAGVRAGGSRAQADPRVADPSEHHPGDRARGVRAWG 590
V AG RAGG D R G+ RGV WG
Sbjct: 660 VRAGPRAGGGGGGGDQRRGGGGVRGGGE*GRGVWRWG 770
>gb|BG366389.2|BG366389 HVSMEi0006O04f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006O04f, mRNA sequence
Length = 940
Score = 163 bits (350), Expect(2) = 4e-042
Identities = 74/187 (39%), Positives = 108/187 (57%)
Frame = -1 / +1
Query: 1044 VEPAKSILGAKVGIRRATEAAGIPYTYAVAGFFAGFGLPKVGQVLAPGPPADKAVVLGDG 865
+EP + K+ IRRA E IP+TY A FA + P + Q+ PP +K V GDG
Sbjct: 55 LEPGRITFDEKMEIRRAIEERNIPHTYISANCFAAYFAPNLCQMGTLLPPKEKVHVYGDG 234
Query: 864 DTKAVFVEEGDIATYTVLAADDPRAENKVLYIKPPANTLSHNELLSLWEKKTGKTFRREY 685
+ KAVF++E DIA YT+ DDP A NK +Y++P N LS NEL++ WEK +GK +
Sbjct: 235 NVKAVFMDEDDIAAYTIKCIDDPLALNKTIYLRPQENILSQNELIAKWEKVSGKVLEKIP 414
Query: 684 VPEEAVLKQIQESPIPLNIILAIGHAAFVRGEQTGFEIDPAKGVDASELYPDVKYTTVDE 505
+P + L ++ + + + + + F G T EI +AS LYP+V+YT +DE
Sbjct: 415 IPSDEFLASMKGTDLANQVGIGHYYHIFYEGCLTNXEIGHDGEEEASLLYPEVQYTRMDE 594
Query: 504 YLNRFL* 484
Y+ R+L*
Sbjct: 595 YMKRYL* 615
Score = 29.5 bits (58), Expect(2) = 4e-042
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / +1
Query: 1095 KRFFPSEFGLDVDRTG 1048
KRF PSEFG+D R G
Sbjct: 1 KRFLPSEFGMDPARMG 48
>gb|BI958687.1|BI958687 HVSMEn0016D18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016D18f,
mRNA sequence
Length = 660
Score = 168 bits (361), Expect = 8e-041
Identities = 74/104 (71%), Positives = 87/104 (83%)
Frame = -1 / +3
Query: 1401 KSKILVVGGTGYLGRHVVAASARLGHPTSALVRDTAPSDPAKAALLKSFQDAGVTLLKGD 1222
KSKILV+GGTGY+G+HVVAASARLGHPT ALVRDTAP A LLK+FQD+GVTLLKGD
Sbjct: 60 KSKILVIGGTGYIGKHVVAASARLGHPTLALVRDTAPCGARGAXLLKTFQDSGVTLLKGD 239
Query: 1221 LYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKR 1090
LY +LVSA K A+VVIS LG+MQIAD ++L+D I+ A NVK+
Sbjct: 240 LYYHGNLVSAXKAANVVISTLGAMQIADHTQLMDIIEGAFNVKK 371
Score = 133 bits (286), Expect = 2e-030
Identities = 64/103 (62%), Positives = 66/103 (64%)
Frame = +2 / -3
Query: 1097 TFPASLMASTSRLWSAICIDPSTEMTTSAPFTALTRLAWSYRSPLRSVTPASWKXXXXXX 1276
T A M S S + SAICI PS EMTT A ALTRL W YRSPLRSVTP SWK
Sbjct: 364 TLKAPSMMSMSWV*SAICIAPSVEMTTLAALXALTRLPW*YRSPLRSVTPESWKVLSX*A 185
Query: 1277 XXXXXXXXXXTSAEVGWPSRALAATTCLPRYPVPPTTRILLFS 1405
TSA VGWPSRALAATTCLP PVPP TRILL +
Sbjct: 184 PLAPQGAVSRTSARVGWPSRALAATTCLPM*PVPPITRILLLA 56
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 440,307,711
Number of Sequences: 312970
Number of extensions: 5789527
Number of successful extensions: 60155
Number of sequences better than 1.0e-020: 104
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 17886449132
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)