TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3858636.2.1
(907 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF265916.1|BF265916 HV_CEa0013K19f Hordeum vulgare seedl... 303 9e-082
gb|BQ763878.1|BQ763878 EBro03_SQ005_L15_R root, 3 week, wat... 303 9e-082
gb|BQ765924.1|BQ765924 EBro03_SQ008_E16_R root, 3 week, wat... 303 9e-082
emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenyl... 303 9e-082
gb|BI956808.1|BI956808 HVSMEn0005G21f Hordeum vulgare rachi... 295 2e-079
gb|BG365997.1|BG365997 HVSMEi0004M09f Hordeum vulgare 20 DA... 291 5e-078
gb|BG414191.1|BG414191 HVSMEk0001A07f Hordeum vulgare testa... 290 7e-078
gb|BI956268.1|BI956268 HVSMEn0001M16f Hordeum vulgare rachi... 287 5e-077
gb|BQ469057.1|BQ469057 HM03D09r HM Hordeum vulgare subsp. v... 278 4e-074
gb|BI959849.1|BI959849 HVSMEn0022A20f Hordeum vulgare rachi... 277 5e-074
gb|AV917458.1|AV917458 AV917458 K. Sato unpublished cDNA li... 273 8e-073
gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, dro... 272 2e-072
gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, wat... 272 2e-072
gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedl... 271 4e-072
emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenyl... 266 1e-071
gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, wat... 265 2e-070
gb|BF628845.2|BF628845 HVSMEb0008N10f Hordeum vulgare seedl... 265 3e-070
gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, dro... 261 1e-069
gb|BI959802.1|BI959802 HVSMEn0021J20f Hordeum vulgare rachi... 262 2e-069
gb|AV928635.1|AV928635 AV928635 K. Sato unpublished cDNA li... 253 7e-067
gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. v... 251 1e-066
gb|AV931028.1|AV931028 AV931028 K. Sato unpublished cDNA li... 252 2e-066
gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. v... 251 5e-066
gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedl... 249 1e-065
gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, dro... 248 3e-065
gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. v... 244 6e-064
gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. v... 244 6e-064
gb|BM816193.1|BM816193 HC109D04_T3.ab1 HC Hordeum vulgare s... 172 2e-063
gb|AL505275.1|AL505275 AL505275 Hordeum vulgare Barke roots... 242 3e-063
gb|BF261029.2|BF261029 HVSMEf0023J05f Hordeum vulgare seedl... 240 7e-063
gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, dro... 237 5e-062
gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hyd... 235 8e-062
gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA li... 236 1e-061
gb|AL503927.1|AL503927 AL503927 Hordeum vulgare Barke roots... 232 3e-060
gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA li... 231 4e-060
gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. v... 149 1e-059
gb|AV931810.1|AV931810 AV931810 K. Sato unpublished cDNA li... 225 3e-058
gb|BM370557.2|BM370557 EBro08_SQ004_J10_R root, 3 week, dro... 221 6e-057
gb|AV919005.1|AV919005 AV919005 K. Sato unpublished cDNA li... 220 9e-057
gb|BJ459164.1|BJ459164 BJ459164 K. Sato unpublished cDNA li... 216 1e-055
gb|AV928004.1|AV928004 AV928004 K. Sato unpublished cDNA li... 208 2e-055
gb|AV912724.1|AV912724 AV912724 K. Sato unpublished cDNA li... 131 1e-054
gb|BI777236.2|BI777236 EBro03_SQ002_I15_R root, 3 week, wat... 213 1e-054
gb|AV919026.1|AV919026 AV919026 K. Sato unpublished cDNA li... 203 7e-054
gb|AV918666.1|AV918666 AV918666 K. Sato unpublished cDNA li... 207 6e-053
gb|CB880955.1|CB880955 HM08F11w HM Hordeum vulgare subsp. v... 205 2e-052
gb|BE214036.1|BE214036 HV_CEb0001P14f Hordeum vulgare seedl... 186 4e-052
gb|AV930308.1|AV930308 AV930308 K. Sato unpublished cDNA li... 202 2e-051
gb|AV931809.1|AV931809 AV931809 K. Sato unpublished cDNA li... 202 2e-051
gb|BI957553.1|BI957553 HVSMEn0010B19f Hordeum vulgare rachi... 202 3e-051
gb|BF258018.2|BF258018 HVSMEf0014I06f Hordeum vulgare seedl... 131 3e-051
gb|AV919053.1|AV919053 AV919053 K. Sato unpublished cDNA li... 164 4e-051
gb|AL505417.1|AL505417 AL505417 Hordeum vulgare Barke roots... 200 7e-051
gb|BI957512.1|BI957512 HVSMEn0009P04f Hordeum vulgare rachi... 200 7e-051
gb|AV926975.1|AV926975 AV926975 K. Sato unpublished cDNA li... 200 7e-051
gb|BM372199.2|BM372199 EBro03_SQ004_E20_R root, 3 week, wat... 148 1e-050
gb|AV928876.1|AV928876 AV928876 K. Sato unpublished cDNA li... 166 1e-050
gb|AV918830.1|AV918830 AV918830 K. Sato unpublished cDNA li... 198 4e-050
gb|AV930975.1|AV930975 AV930975 K. Sato unpublished cDNA li... 198 4e-050
gb|BE438184.1|BE438184 SFR010.H12F990722 ITEC SFR Barley Le... 168 4e-050
gb|BJ468382.1|BJ468382 BJ468382 K. Sato unpublished cDNA li... 190 8e-048
gb|BI959376.1|BI959376 HVSMEn0019H01f Hordeum vulgare rachi... 189 1e-047
gb|BI959811.1|BI959811 HVSMEn0021K21f Hordeum vulgare rachi... 189 1e-047
gb|AL501352.1|AL501352 AL501352 Hordeum vulgare Barke roots... 186 1e-046
gb|AV927824.1|AV927824 AV927824 K. Sato unpublished cDNA li... 105 4e-045
gb|BQ756566.1|BQ756566 EBem09_SQ003_B12_R embryo, 1 Day ger... 179 2e-044
gb|AV931622.1|AV931622 AV931622 K. Sato unpublished cDNA li... 178 3e-044
gb|BI958293.1|BI958293 HVSMEn0014E11f Hordeum vulgare rachi... 118 1e-043
gb|BI960030.1|BI960030 HVSMEn0022P01f Hordeum vulgare rachi... 175 3e-043
gb|BE421683.1|BE421683 HWM012cG.10r ITEC HWM Barley Leaf Li... 174 5e-043
gb|AL503163.1|AL503163 AL503163 Hordeum vulgare Barke roots... 170 9e-042
gb|BJ466939.1|BJ466939 BJ466939 K. Sato unpublished cDNA li... 170 9e-042
gb|BQ468898.1|BQ468898 HM02L09r HM Hordeum vulgare subsp. v... 170 9e-042
gb|AL501346.1|AL501346 AL501346 Hordeum vulgare Barke roots... 160 1e-041
gb|BJ468508.1|BJ468508 BJ468508 K. Sato unpublished cDNA li... 168 3e-041
gb|BQ762717.1|BQ762717 EBro02_SQ004_I20_R root, 3 week, hyd... 168 3e-041
gb|AV921618.1|AV921618 AV921618 K. Sato unpublished cDNA li... 168 5e-041
gb|AV928881.1|AV928881 AV928881 K. Sato unpublished cDNA li... 167 6e-041
gb|BU968202.1|BU968202 HB06L24r BC Hordeum vulgare subsp. v... 166 2e-040
gb|AL502685.1|AL502685 AL502685 Hordeum vulgare Barke roots... 163 1e-039
gb|BE437808.1|BE437808 SFR007.G02F990625 ITEC SFR Barley Le... 162 3e-039
gb|BE437962.1|BE437962 SFR009.D04F990512 ITEC SFR Barley Le... 162 3e-039
gb|BI959619.1|BI959619 HVSMEn0020H03f Hordeum vulgare rachi... 162 3e-039
gb|BI959878.1|BI959878 HVSMEn0022D03f Hordeum vulgare rachi... 135 3e-039
gb|BJ465265.1|BJ465265 BJ465265 K. Sato unpublished cDNA li... 160 7e-039
gb|AV923115.1|AV923115 AV923115 K. Sato unpublished cDNA li... 131 1e-038
gb|BJ452093.1|BJ452093 BJ452093 K. Sato unpublished cDNA li... 159 3e-038
gb|BQ765396.1|BQ765396 EBro03_SQ007_E05_R root, 3 week, wat... 158 4e-038
gb|AJ427587.1|AJ427587 AJ427587 Hordeum vulgare subsp. vulg... 150 4e-037
gb|AL501349.1|AL501349 AL501349 Hordeum vulgare Barke roots... 154 6e-037
gb|BQ766648.1|BQ766648 EBro08_SQ006_A20_R root, 3 week, dro... 106 7e-037
gb|AL502364.1|AL502364 AL502364 Hordeum vulgare Barke roots... 147 9e-037
gb|BI947758.1|BI947758 HVSMEl0006M12f Hordeum vulgare spike... 153 1e-036
gb|BQ662656.1|BQ662656 HS03H24u HS Hordeum vulgare subsp. v... 153 1e-036
gb|AL500991.1|AL500991 AL500991 Hordeum vulgare Barke roots... 151 4e-036
gb|AL501962.1|AL501962 AL501962 Hordeum vulgare Barke roots... 151 4e-036
gb|CB858981.1|CB858981 HI08O15w HI Hordeum vulgare subsp. v... 150 8e-036
gb|BE214612.2|BE214612 HV_CEb0003P13f Hordeum vulgare seedl... 137 2e-034
gb|AL501348.1|AL501348 AL501348 Hordeum vulgare Barke roots... 145 3e-034
gb|BF265906.3|BF265906 HV_CEa0013K09f Hordeum vulgare seedl... 126 9e-034
gb|BQ760542.1|BQ760542 EBro03_SQ001_F05_R root, 3 week, wat... 144 9e-034
gb|BI957141.1|BI957141 HVSMEn0007L14f Hordeum vulgare rachi... 138 6e-033
gb|AL501350.1|AL501350 AL501350 Hordeum vulgare Barke roots... 141 6e-033
gb|BF259754.3|BF259754 HVSMEf0020C19f Hordeum vulgare seedl... 138 3e-032
gb|BI959574.1|BI959574 HVSMEn0020E07f Hordeum vulgare rachi... 136 1e-031
gb|BQ767318.1|BQ767318 EBro08_SQ008_F18_R root, 3 week, dro... 133 3e-031
gb|BM443256.2|BM443256 EBro02_SQ003_E13_R root, 3 week, hyd... 130 3e-031
gb|BQ664513.1|BQ664513 HV03K13u HV Hordeum vulgare subsp. v... 135 3e-031
gb|AV926974.1|AV926974 AV926974 K. Sato unpublished cDNA li... 133 1e-030
gb|AV913531.1|AV913531 AV913531 K. Sato unpublished cDNA li... 130 2e-030
gb|BI959468.1|BI959468 HVSMEn0019M15f Hordeum vulgare rachi... 133 2e-030
gb|AJ462386.1|AJ462386 AJ462386 S00002 Hordeum vulgare subs... 132 4e-030
gb|BM443147.2|BM443147 EBro02_SQ002_N12_R root, 3 week, hyd... 132 4e-030
gb|AL502072.1|AL502072 AL502072 Hordeum vulgare Barke roots... 130 9e-030
gb|BQ661371.1|BQ661371 HM03D09u HM Hordeum vulgare subsp. v... 130 9e-030
gb|BU988288.1|BU988288 HF17D09r HF Hordeum vulgare subsp. v... 127 9e-029
gb|BF255291.2|BF255291 HVSMEf0006H12f Hordeum vulgare seedl... 127 1e-028
gb|BQ661267.1|BQ661267 HM02L09u HM Hordeum vulgare subsp. v... 127 1e-028
gb|BQ760454.1|BQ760454 EBro02_SQ002_M23_R root, 3 week, hyd... 126 2e-028
gb|BI955715.1|BI955715 HVSMEm0024C22f Hordeum vulgare green... 125 3e-028
gb|BI958535.1|BI958535 HVSMEn0015H19f Hordeum vulgare rachi... 125 4e-028
gb|CA016735.1|CA016735 HV06I16u HV Hordeum vulgare subsp. v... 124 6e-028
gb|AL501291.1|AL501291 AL501291 Hordeum vulgare Barke roots... 118 7e-028
gb|BF254228.2|BF254228 HVSMEf0003G02f Hordeum vulgare seedl... 120 1e-026
gb|BG415885.2|BG415885 HVSMEk0008K04f Hordeum vulgare testa... 116 1e-025
gb|BE558376.3|BE558376 HV_CEb0017H01f Hordeum vulgare seedl... 116 1e-025
gb|BQ765456.1|BQ765456 EBro03_SQ007_P05_R root, 3 week, wat... 116 2e-025
gb|AL503979.1|AL503979 AL503979 Hordeum vulgare Barke roots... 116 2e-025
gb|BI957636.1|BI957636 HVSMEn0010H09f Hordeum vulgare rachi... 116 2e-025
gb|BE438019.1|BE438019 SFR010.A02F990628 ITEC SFR Barley Le... 115 3e-025
gb|AL502617.1|AL502617 AL502617 Hordeum vulgare Barke roots... 104 2e-024
gb|AV914027.1|AV914027 AV914027 K. Sato unpublished cDNA li... 90 8e-024
gb|BI779552.2|BI779552 EBro01_SQ004_G11_R root, 3 week, hyd... 106 2e-023
gb|BJ451668.1|BJ451668 BJ451668 K. Sato unpublished cDNA li... 109 3e-023
gb|BI777223.2|BI777223 EBro03_SQ002_H18_R root, 3 week, wat... 109 3e-023
gb|BM816192.1|BM816192 HC110D06_T3.ab1 HC Hordeum vulgare s... 104 7e-022
gb|BM372206.2|BM372206 EBro03_SQ004_F04_R root, 3 week, wat... 102 2e-021
>gb|BF265916.1|BF265916 HV_CEa0013K19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013K19f, mRNA sequence
Length = 773
Score = 303 bits (656), Expect = 9e-082
Identities = 125/172 (72%), Positives = 148/172 (86%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 103 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 282
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 283 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 462
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 463 VREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 618
Score = 196 bits (422), Expect = 2e-049
Identities = 103/170 (60%), Positives = 106/170 (62%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 617 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 438
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 437 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 258
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
AR F I G LAL SS TASRSMAV R FSLKRAL RSP +VSTF
Sbjct: 257 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTF 108
Score = 114 bits (244), Expect(2) = 4e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / -3
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 627 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 448
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 447 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 319
Score = 22.6 bits (43), Expect(2) = 4e-025
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -1 / -3
Query: 187 DGGEQGLLXXXXXXXXXXXAGGQHL 113
DGG++ LL GQHL
Sbjct: 183 DGGDEALLAEARAGEVAGRVHGQHL 109
>gb|BQ763878.1|BQ763878 EBro03_SQ005_L15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_L15 5', mRNA sequence
Length = 615
Score = 303 bits (656), Expect = 9e-082
Identities = 125/172 (72%), Positives = 148/172 (86%)
Frame = +2 / +2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 68 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 247
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 248 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 427
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 428 VREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 583
Score = 196 bits (422), Expect = 2e-049
Identities = 103/170 (60%), Positives = 106/170 (62%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 582 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 403
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 402 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 223
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
AR F I G LAL SS TASRSMAV R FSLKRAL RSP +VSTF
Sbjct: 222 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTF 73
Score = 114 bits (244), Expect(2) = 3e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / -3
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 592 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 413
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 412 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 284
Score = 22.6 bits (43), Expect(2) = 3e-025
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -1 / -3
Query: 187 DGGEQGLLXXXXXXXXXXXAGGQHL 113
DGG++ LL GQHL
Sbjct: 148 DGGDEALLAEARAGEVAGRVHGQHL 74
>gb|BQ765924.1|BQ765924 EBro03_SQ008_E16_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_E16 5', mRNA sequence
Length = 625
Score = 303 bits (656), Expect = 9e-082
Identities = 125/172 (72%), Positives = 148/172 (86%)
Frame = +2 / +2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 80 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 259
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 260 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 439
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 440 VREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 595
Score = 196 bits (422), Expect = 2e-049
Identities = 103/170 (60%), Positives = 106/170 (62%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 594 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 415
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 414 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 235
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
AR F I G LAL SS TASRSMAV R FSLKRAL RSP +VSTF
Sbjct: 234 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTF 85
Score = 114 bits (244), Expect(2) = 3e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / -1
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 604 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 425
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 424 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 296
Score = 22.6 bits (43), Expect(2) = 3e-025
Identities = 9/25 (36%), Positives = 11/25 (44%)
Frame = -1 / -1
Query: 187 DGGEQGLLXXXXXXXXXXXAGGQHL 113
DGG++ LL GQHL
Sbjct: 160 DGGDEALLAEARAGEVAGRVHGQHL 86
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp)
Length = 1831
Score = 303 bits (656), Expect = 9e-082
Identities = 125/172 (72%), Positives = 148/172 (86%)
Frame = +2 / +3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 972 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 1151
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 1152 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 1331
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 1332 VREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 1487
Score = 196 bits (422), Expect = 2e-049
Identities = 103/170 (60%), Positives = 106/170 (62%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 1486 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 1307
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 1306 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 1127
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
AR F I G LAL SS TASRSMAV R FSLKRAL RSP +VSTF
Sbjct: 1126 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTF 977
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / -3
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 1496 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 1317
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 1316 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 1188
>gb|BI956808.1|BI956808 HVSMEn0005G21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005G21f, mRNA sequence
Length = 817
Score = 295 bits (639), Expect = 2e-079
Identities = 122/172 (70%), Positives = 145/172 (84%)
Frame = +2 / +2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GGDL SARF K+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 149 SKKVLTMNGGGDLSSARFIXKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 328
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 329 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 508
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
+R++LG VYLTGEKL SPGEEC K FL ++ KLIDPML+CLKEW+G+PLPI
Sbjct: 509 VREELGCVYLTGEKLLSPGEECTKGFLGITHNKLIDPMLECLKEWNGEPLPI 664
Score = 193 bits (417), Expect = 9e-049
Identities = 100/170 (58%), Positives = 105/170 (61%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL + R L+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 663 MGRGSPFHSLRHSSMGSMSLLWVMPRKPLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 484
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 483 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 304
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
AR F I G LAL SS TASRSMAV R F +KRAL RSPP +VSTF
Sbjct: 303 ARSFCISG*LALHASSA*LNTASRSMAVMRLFXMKRALERSPPPFMVSTF 154
Score = 105 bits (224), Expect = 4e-022
Identities = 53/105 (50%), Positives = 61/105 (58%)
Frame = -1 / -1
Query: 637 VASSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAV 458
+ S DGQG AVPLLEA+EHGV+EL + + +E G+VH AE+LADEAV
Sbjct: 679 IPSYVDGQGFAVPLLEALEHGVNELVVGDAKEALGAFLPGGQQLLAGEVHAAELLADEAV 500
Query: 457 QRVRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
QR RPALLD VGD R Q QLLLE VDLGE
Sbjct: 499 QRERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 365
>gb|BG365997.1|BG365997 HVSMEi0004M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004M09f, mRNA sequence
Length = 939
Score = 291 bits (629), Expect = 5e-078
Identities = 121/171 (70%), Positives = 142/171 (83%)
Frame = +2 / +1
Query: 110 RKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPS 289
+KVLT + GDL AR EK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA +
Sbjct: 70 KKVLTMNPTGDLSIARLIEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTA 249
Query: 290 GEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFI 469
G E D+ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYR +
Sbjct: 250 GPGEADSEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRLV 429
Query: 470 RQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
R++LG VYLTGEKL SPGEEC KV L +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 430 REELGCVYLTGEKLLSPGEECTKVLLGISQNKLIDPMLECLKEWNGEPLPI 582
Score = 191 bits (412), Expect = 4e-048
Identities = 100/170 (58%), Positives = 105/170 (61%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 581 MGRGSPFHSLRHSSMGSMSLFWLMPSKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 402
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 401 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 222
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
AR F I G LAL SS TASRSMAV R FS+KRA+ RSP +VSTF
Sbjct: 221 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSIKRAMERSPVGFMVSTF 72
Score = 109 bits (232), Expect = 3e-023
Identities = 55/103 (53%), Positives = 61/103 (59%)
Frame = -1 / -1
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ ++ G+VH AE+LAD AVQR
Sbjct: 591 SDVDGQGLAVPLLEALEHGVDELVLADAEQDLGAFLAGGQQLLAGEVHAAELLAD*AVQR 412
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 411 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 283
>gb|BG414191.1|BG414191 HVSMEk0001A07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0001A07f, mRNA sequence
Length = 586
Score = 290 bits (628), Expect = 7e-078
Identities = 119/160 (74%), Positives = 139/160 (86%)
Frame = +2 / +1
Query: 143 LHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASV 322
L SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA +G E ++ A+V
Sbjct: 1 LSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAESEATV 180
Query: 323 FSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTG 502
FSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF+R++LG VYLTG
Sbjct: 181 FSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCVYLTG 360
Query: 503 EKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
EKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 361 EKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 480
Score = 181 bits (389), Expect = 6e-045
Identities = 95/158 (60%), Positives = 98/158 (62%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SS+GSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 479 MGRGSPFHSLRHSSIGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 300
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 299 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 120
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRAL 148
AR F I G LAL SS TASRSMAV R FSLKRAL
Sbjct: 119 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRAL 6
Score = 106 bits (226), Expect = 2e-022
Identities = 55/103 (53%), Positives = 59/103 (57%)
Frame = -1 / -2
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVP LEA+EH VDEL LA+ E G+VH AE+LADEAVQR
Sbjct: 489 SDVDGQGLAVPFLEALEHWVDELVLADA*EDLGAFLAGGQQLLAGEVHAAELLADEAVQR 310
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 309 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 181
>gb|BI956268.1|BI956268 HVSMEn0001M16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0001M16f, mRNA sequence
Length = 613
Score = 287 bits (622), Expect = 5e-077
Identities = 119/161 (73%), Positives = 138/161 (85%)
Frame = +2 / +2
Query: 140 DLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASAS 319
DL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA +G E ++ A+
Sbjct: 5 DLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAESEAT 184
Query: 320 VFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLT 499
VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF R++LG VYLT
Sbjct: 185 VFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFXREELGCVYLT 364
Query: 500 GEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
GEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PL I
Sbjct: 365 GEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLAI 487
Score = 181 bits (389), Expect = 6e-045
Identities = 96/161 (59%), Positives = 99/161 (61%)
Frame = -2 / -2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
M RG P HSLR SSMGS+SL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 486 MARGSPFHSLRHSSMGSISLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRXKRYSGNDL 307
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 306 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 127
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRS 139
AR F I G LAL SS TASRSMAV R FSLKRAL RS
Sbjct: 126 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERS 4
Score = 106 bits (226), Expect = 2e-022
Identities = 54/103 (52%), Positives = 60/103 (58%)
Frame = -1 / -1
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGV++L LA +E G+VH AE+LA EAVQR
Sbjct: 496 SDVDGQGLAVPLLEALEHGVNKLVLANAEEDLGAFLAGGQQLLAGEVHAAELLAXEAVQR 317
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 316 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 188
>gb|BQ469057.1|BQ469057 HM03D09r HM Hordeum vulgare subsp. vulgare cDNA clone HM03D09
5-PRIME, mRNA sequence
Length = 535
Score = 278 bits (601), Expect = 4e-074
Identities = 116/161 (72%), Positives = 137/161 (85%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 52 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 231
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 232 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 411
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDC 589
+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+C
Sbjct: 412 VREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLEC 534
Score = 175 bits (376), Expect = 4e-043
Identities = 94/158 (59%), Positives = 97/158 (61%)
Frame = -2 / -3
Query: 585 SSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAP 406
SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D LSLI L +GA P
Sbjct: 530 SSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVP 351
Query: 405 VSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTSTARIFFIRGELAL 226
SKAT LENT A S S P AWSTSTAR F I G LAL
Sbjct: 350 FSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTSTARSFCISG*LAL 171
Query: 225 QGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
SS TASRSMAV R FSLKRAL RSP +VSTF
Sbjct: 170 HASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTF 57
>gb|BI959849.1|BI959849 HVSMEn0022A20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022A20f, mRNA sequence
Length = 623
Score = 277 bits (600), Expect = 5e-074
Identities = 113/154 (73%), Positives = 132/154 (85%)
Frame = +2 / +2
Query: 161 SEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINR 340
SEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA +G E + +VFSKIN+
Sbjct: 8 SEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAEREGTVFSKINK 187
Query: 341 FEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSP 520
FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF+R++LG VYLTGEKL SP
Sbjct: 188 FEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCVYLTGEKLLSP 367
Query: 521 GEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
GEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 368 GEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 469
Score = 172 bits (370), Expect = 3e-042
Identities = 91/154 (59%), Positives = 93/154 (60%)
Frame = -2 / -3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 468 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 289
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT S S P AWSTST
Sbjct: 288 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVPSLSASPGPAVRAWSTST 109
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSL 160
AR F I G LAL SS TASRSMAV R FSL
Sbjct: 108 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSL 7
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / -2
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 478 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 299
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 298 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 170
>gb|AV917458.1|AV917458 AV917458 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10a01 3', mRNA sequence
Length = 701
Score = 273 bits (591), Expect = 8e-073
Identities = 111/150 (74%), Positives = 130/150 (86%)
Frame = +2 / -2
Query: 173 LLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEE 352
L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA +G E ++ A+VFSKIN+FEEE
Sbjct: 700 LITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAESEATVFSKINKFEEE 521
Query: 353 LREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEEC 532
LR ALPRE+EAARVAFE G API N IKESRS+PLYRF+R++LG VYLTGEKL SPGEEC
Sbjct: 520 LRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCVYLTGEKLLSPGEEC 341
Query: 533 NKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 340 TKVFLGISQNKLIDPMLECLKEWNGEPLPI 251
Score = 168 bits (362), Expect = 3e-041
Identities = 89/150 (59%), Positives = 91/150 (60%)
Frame = -2 / +3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 252 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 431
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 432 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 611
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSR 172
AR F I G LAL SS TASRSMAV R
Sbjct: 612 ARSFCISG*LALHASSA*LNTASRSMAVMR 701
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / +2
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 242 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 421
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 422 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 550
>gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_P15 5', mRNA sequence
Length = 679
Score = 272 bits (589), Expect = 2e-072
Identities = 113/174 (64%), Positives = 138/174 (79%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARK L+T+ G LHSARF EK LL IDREAV+ Y DDPCSAN PLM+K+RAVLV+HA
Sbjct: 148 ARKTLSTNSNGHLHSARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALA 327
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+GEAE D SVF+K+ FE+ELR LP+E+EAAR A E G A NRI E RSYPLYRF
Sbjct: 328 NGEAEHDVETSVFAKLATFEQELRAVLPKEVEAARSAVENGTAAQQNRISECRSYPLYRF 507
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R++LG YLTGEK +SPGEE +KVF+A+++GK ID +L+CLKEW+G+PLPIC*
Sbjct: 508 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 669
Score = 163 bits (351), Expect = 1e-039
Identities = 89/174 (51%), Positives = 96/174 (55%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ+GRG P HS R S SM LP A NTL SSPGD FSPV+Y+ P S R R SGY
Sbjct: 668 QQIGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLRTNR*SGY 489
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR S I A P S A L NTD S SASPL A ST
Sbjct: 488 DRHSEIRFCCAAVPFSTALLAASTSFGSTARSSCSNVASLANTDVSTSCSASPLAKACST 309
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
TARIF + G LALQGSS TASRS+ R+FS KRAL R P LV+S FLA
Sbjct: 308 RTARIFCMSG*LALQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLLVLSVFLA 147
>gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_F15 5', mRNA sequence
Length = 714
Score = 272 bits (588), Expect = 2e-072
Identities = 113/175 (64%), Positives = 139/175 (79%)
Frame = +2 / +2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARK L+T+ G LHSARF EK LL IDREAV+ Y DDPCSAN PLM+K+RAVLV+HA
Sbjct: 8 ARKTLSTNSNGHLHSARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALA 187
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+GEAE+D SVF+K+ FE+ELR LP+E+EAAR A E G A NRI E RSYPLYRF
Sbjct: 188 NGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRF 367
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*G 631
+R++LG YLTGEK +SPGEE +KVF+A+++GK ID +L+CLK W+G+PLPIC*G
Sbjct: 368 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*G 532
Score = 165 bits (355), Expect = 3e-040
Identities = 93/183 (50%), Positives = 102/183 (55%)
Frame = -2 / -1
Query: 654 LASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRS 475
L+S H P Q+GRG P LR SS SM LP A NTL SSPGDL FSPV+Y+ P S
Sbjct: 555 LSSVHVLDP*QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSS 376
Query: 474 WRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSA 295
R R SGYDR S+I A P S A L NTD S SA
Sbjct: 375 LRTNR*SGYDRHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSA 196
Query: 294 SPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVST 115
SPL A ST TARIF + G LALQGSS TASRS+ R+FS KRAL R P LV+S
Sbjct: 195 SPLAKACSTRTARIFCMSG*LALQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLLVLSV 16
Query: 114 FLA 106
FLA
Sbjct: 15 FLA 7
>gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009N21f, mRNA sequence
Length = 872
Score = 271 bits (586), Expect = 4e-072
Identities = 113/175 (64%), Positives = 139/175 (79%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARK L+T+ G LHSARF EK LL IDREAV+ Y DDPCSAN PLM+K+RAVLV+HA
Sbjct: 121 ARKTLSTNSNGHLHSARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALA 300
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+GEAE+D SVF+K+ FE+ELR LP+E+EAAR A E G A NRI E RSYPLYRF
Sbjct: 301 NGEAERDVETSVFAKLAVFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRF 480
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*G 631
+R++LG YLTGEK +SPGEE +KVF+A+++GK ID +L+CLK W+G+PLPIC*G
Sbjct: 481 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*G 645
Score = 163 bits (350), Expect = 1e-039
Identities = 91/179 (50%), Positives = 99/179 (55%)
Frame = -2 / -1
Query: 642 HRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMK 463
H P Q+GRG P LR SS SM LP A NTL SSPGDL FSPV+Y+ P S R
Sbjct: 656 HVLDP*QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSSLRTN 477
Query: 462 RYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLG 283
R SGYDR S+I A P S A L NTD S SASPL
Sbjct: 476 R*SGYDRHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNTASLANTDVSTSRSASPLA 297
Query: 282 GAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
A ST TARIF + G LALQGSS TASRS+ R+FS KRAL R P LV+S FLA
Sbjct: 296 KACSTRTARIFCMSG*LALQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLLVLSVFLA 120
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp)
Length = 1670
Score = 266 bits (576), Expect(2) = 1e-071
Identities = 111/174 (63%), Positives = 134/174 (77%)
Frame = +2 / +3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARK L+T G LH ARF EK LL IDREAV+ Y DDPCS N PLM+K+RAVLV+HA
Sbjct: 909 ARKTLSTDNNGHLHKARFCEKDLLLTIDREAVFAYADDPCSVNYPLMQKMRAVLVEHALA 1088
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+GEAE D SVF+K+ FE+ELR LP E+EAAR A E G A NRI E RSYPLYRF
Sbjct: 1089 NGEAEHDVETSVFAKLATFEQELRAVLPTEVEAARSAVENGTAAQQNRISECRSYPLYRF 1268
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R++LG YLTGEK +SPGEE +KVF+A+++GK ID +L+CLKEW+G+PLPIC*
Sbjct: 1269 VRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 1430
Score = 170 bits (365), Expect = 1e-041
Identities = 89/174 (51%), Positives = 96/174 (55%)
Frame = -2 / -2
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ+GRG P HS R S SM LP A NTL SSPGD FSPV+Y+ P S R R SGY
Sbjct: 1429 QQIGRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLRTNR*SGY 1250
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR S I A P S A L NTD S SASPL A ST
Sbjct: 1249 DRHSEIRFCCAAVPFSTALRAASTSVGNTARSSCSNVASLANTDVSTSCSASPLAKACST 1070
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
TARIF + G L LQGSS Y TASRS+ R+FS KRALWR P V+S FLA
Sbjct: 1069 RTARIFCMSG*LTLQGSSAYANTASRSIVSRRSFSQKRALWRWPLLSVLSVFLA 908
Score = 24.0 bits (46), Expect(2) = 1e-071
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3 / +2
Query: 24 LGQGGRGADGEPPRGEPQER 83
LG+ G PPRGE QER
Sbjct: 824 LGRVVPGYRSPPPRGECQER 883
>gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_A15 5', mRNA sequence
Length = 617
Score = 265 bits (574), Expect = 2e-070
Identities = 110/171 (64%), Positives = 136/171 (79%)
Frame = +2 / +1
Query: 119 LTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEA 298
L+T+ G LHSARF EK LL IDREAV+ Y DDPCSAN PLM+K+RAVLV+HA +GEA
Sbjct: 4 LSTNSNGHLHSARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALANGEA 183
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
E+D SVF+K+ FE+ELR LP+E+EAAR A E G A NRI E RSYPLYRF+R++
Sbjct: 184 ERDVETSVFAKLAMFEQELRAMLPKEVEAARSAVENGTATQQNRITECRSYPLYRFVRKE 363
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*G 631
LG YLTGEK +SPGEE +KVF+A+++GK ID +L+CLK W+G+PLPIC*G
Sbjct: 364 LGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDALLECLKGWNGEPLPIC*G 516
Score = 159 bits (341), Expect = 3e-038
Identities = 90/179 (50%), Positives = 99/179 (55%)
Frame = -2 / -1
Query: 654 LASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRS 475
L+S H P Q+GRG P LR SS SM LP A NTL SSPGDL FSPV+Y+ P S
Sbjct: 539 LSSVHVLDP*QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSS 360
Query: 474 WRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSA 295
R R SGYDR S+I A P S A L NTD S SA
Sbjct: 359 LRTNR*SGYDRHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSA 180
Query: 294 SPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVS 118
SPL A ST TARIF + G LALQGSS TASRS+ R+FS KRAL R P LV+S
Sbjct: 179 SPLAKACSTRTARIFCMSG*LALQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLLVLS 3
>gb|BF628845.2|BF628845 HVSMEb0008N10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008N10f, mRNA sequence
Length = 758
Score = 265 bits (573), Expect = 3e-070
Identities = 113/170 (66%), Positives = 136/170 (80%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 67 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 246
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PL R
Sbjct: 247 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLCRL 426
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPL 616
+R++LG V LTG+KL SPG EC K L +S+ KL+ PML CL WDG+PL
Sbjct: 427 VRRELGCVCLTGDKLLSPGRECTKE*LEISQNKLMGPMLGCLGGWDGEPL 576
Score = 166 bits (357), Expect = 2e-040
Identities = 92/170 (54%), Positives = 99/170 (58%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
M RG PSH R SMG MSL L + +L+HS PG S SPVR+T P S R KR+SG D
Sbjct: 581 MARGSPSHPPRHPSMGPMSLFWLISSYSLVHSRPGLSSLSPVRHTHPSSLRTKRHSGNDL 402
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 401 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 222
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
AR F I G LAL SS TASRSMAV R FSLKRAL RSP +VSTF
Sbjct: 221 ARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTF 72
>gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_A24 5', mRNA sequence
Length = 690
Score = 261 bits (564), Expect(2) = 1e-069
Identities = 109/174 (62%), Positives = 135/174 (77%)
Frame = +2 / +3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+T+ G LH ARF EK LL I+REAV+ Y DDPCS N PLMKK+R VLV+ A
Sbjct: 63 AKKTLSTNSTGGLHVARFCEKDLLQEIEREAVFAYADDPCSPNYPLMKKLRGVLVERALS 242
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G AE DA SV +K+ FEEELR+ LPR +EAAR A E+G A + NRI E RSYPLYRF
Sbjct: 243 NGMAEFDAETSVLAKVALFEEELRKTLPRAVEAARAAVESGTAEMPNRITECRSYPLYRF 422
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R++LG VYLTGEK +SPGEE NKV +A+++GK ID +L+CLKEW+G+PLPIC*
Sbjct: 423 VREELGTVYLTGEKTRSPGEELNKVLVAINQGKHIDALLECLKEWNGEPLPIC* 584
Score = 173 bits (373), Expect = 1e-042
Identities = 91/173 (52%), Positives = 101/173 (58%)
Frame = -2 / -3
Query: 624 QMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYD 445
QMGRG P HSLR SS SM LP L A +TLL SSPGD FSPVRYT P S R R GY+
Sbjct: 580 QMGRGSPFHSLRHSSSASMCLPWLMATSTLLSSSPGDRVFSPVRYTVPSSSRTNR*RGYE 401
Query: 444 RLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTS 265
R S+ILL I A P+S A NT+ AS SA PL A STS
Sbjct: 400 RHSVILLGISAVPLSTAARAASTARGSVLRSSSSNKATFANTEVSASNSAMPLERARSTS 221
Query: 264 TARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTFLA 106
T R FF+ G L LQGSS TASRS++ SR+FS KRA R P LV+S F A
Sbjct: 220 TPRSFFMSG*LGLQGSSA*ANTASRSISWSRSFSQKRAT*RPPVELVLSVFFA 62
Score = 22.6 bits (43), Expect(2) = 1e-069
Identities = 7/12 (58%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 58 HLEENLKSAARA 93
H+EEN+KSA ++
Sbjct: 12 HIEENVKSAVKS 47
>gb|BI959802.1|BI959802 HVSMEn0021J20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021J20f, mRNA sequence
Length = 480
Score = 262 bits (567), Expect = 2e-069
Identities = 111/158 (70%), Positives = 130/158 (82%)
Frame = +2 / +2
Query: 104 GARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAP 283
G + L + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 5 GVEEGLRRNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHAL 184
Query: 284 PSGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYR 463
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYR
Sbjct: 185 TAGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYR 364
Query: 464 FIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDP 577
F+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDP
Sbjct: 365 FVREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDP 478
Score = 164 bits (352), Expect = 8e-040
Identities = 88/148 (59%), Positives = 90/148 (60%)
Frame = -2 / -1
Query: 579 MGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVS 400
MGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D LSLI L +GA P S
Sbjct: 480 MGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFS 301
Query: 399 KATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQG 220
KAT LENT A S S P AWSTSTAR F I G LAL
Sbjct: 300 KATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTSTARSFCISG*LALHA 121
Query: 219 SS*YPYTASRSMAVSRAFSLKRALWRSP 136
SS TASRSMAV R FSLKRAL RSP
Sbjct: 120 SSA*LNTASRSMAVMRLFSLKRALERSP 37
>gb|AV928635.1|AV928635 AV928635 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd15c08 3', mRNA sequence
Length = 671
Score = 253 bits (548), Expect = 7e-067
Identities = 102/140 (72%), Positives = 120/140 (85%)
Frame = +2 / -2
Query: 203 YGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREME 382
+ Y DD CSAN PLM+K+RAVLVDHA +G E ++ A+VFSKIN+FEEELR ALPRE+E
Sbjct: 670 FSYADDACSANYPLMQKLRAVLVDHALTAGPGEAESEATVFSKINKFEEELRSALPREIE 491
Query: 383 AARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEG 562
AARVAFE G API N IKESRS+PLYRF+R++LG VYLTGEKL SPGEEC KVFL +S+
Sbjct: 490 AARVAFENGTAPIPNLIKESRSFPLYRFVREELGCVYLTGEKLLSPGEECTKVFLGISQN 311
Query: 563 KLIDPMLDCLKEWDGKPLPI 622
KLIDPML+CLKEW+G+PLPI
Sbjct: 310 KLIDPMLECLKEWNGEPLPI 251
Score = 156 bits (336), Expect = 1e-037
Identities = 80/136 (58%), Positives = 82/136 (60%)
Frame = -2 / +3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 252 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 431
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 432 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 611
Query: 261 ARIFFIRGELALQGSS 214
AR F I G LAL SS
Sbjct: 612 ARSFCISG*LALHASS 659
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / +2
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 242 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 421
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 422 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 550
>gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. vulgare cDNA clone HM11L11
3-PRIME, mRNA sequence
Length = 658
Score = 251 bits (542), Expect(2) = 1e-066
Identities = 102/174 (58%), Positives = 132/174 (75%)
Frame = +2 / -3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+ + G LH ARF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA
Sbjct: 605 AKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALA 426
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G+ E+ S+F+K+ FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+F
Sbjct: 425 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 246
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R+ G YLTGEK +SPGEE NKV +A++E K IDP+L+CLKEW+G PLP+C*
Sbjct: 245 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC* 84
Score = 86.3 bits (182), Expect(2) = 3e-035
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = -2 / +1
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ GRG P HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG
Sbjct: 85 QQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG* 264
Query: 447 DRLSLILLAIGAAPVS 400
+R SLI L P S
Sbjct: 265 ERQSLIRLGASGVPFS 312
Score = 82.6 bits (174), Expect(2) = 3e-035
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = -2 / +1
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVV 121
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KRA+WR P ++
Sbjct: 412 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLFML 591
Query: 120 STFLA 106
FLA
Sbjct: 592 RVFLA 606
Score = 22.6 bits (43), Expect(2) = 1e-066
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / -3
Query: 58 HLEENLKSAAR 90
H+EEN+K+A R
Sbjct: 656 HIEENMKTAVR 624
>gb|AV931028.1|AV931028 AV931028 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18e12 3', mRNA sequence
Length = 664
Score = 252 bits (545), Expect = 2e-066
Identities = 102/138 (73%), Positives = 119/138 (86%)
Frame = +2 / -1
Query: 209 YYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAA 388
Y DD CSAN PLM+K+RAVLVDHA +G E ++ A+VFSKIN+FEEELR ALPRE+EAA
Sbjct: 664 YADDACSANYPLMQKLRAVLVDHALTAGPGEAESEATVFSKINKFEEELRSALPREIEAA 485
Query: 389 RVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKL 568
RVAFE G API N IKESRS+PLYRF+R++LG VYLTGEKL SPGEEC KVFL +S+ KL
Sbjct: 484 RVAFENGTAPIPNLIKESRSFPLYRFVREELGCVYLTGEKLLSPGEECTKVFLGISQNKL 305
Query: 569 IDPMLDCLKEWDGKPLPI 622
IDPML+CLKEW+G+PLPI
Sbjct: 304 IDPMLECLKEWNGEPLPI 251
Score = 156 bits (336), Expect = 1e-037
Identities = 80/136 (58%), Positives = 82/136 (60%)
Frame = -2 / +3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 252 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 431
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 432 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 611
Query: 261 ARIFFIRGELALQGSS 214
AR F I G LAL SS
Sbjct: 612 ARSFCISG*LALHASS 659
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / +2
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 242 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 421
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 422 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 550
>gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. vulgare cDNA clone HF24H03
5-PRIME, mRNA sequence
Length = 591
Score = 251 bits (542), Expect = 5e-066
Identities = 102/174 (58%), Positives = 132/174 (75%)
Frame = +2 / +3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+ + G LH ARF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA
Sbjct: 45 AKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALA 224
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G+ E+ S+F+K+ FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+F
Sbjct: 225 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 404
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+R+ G YLTGEK +SPGEE NKV +A++E K IDP+L+CLKEW+G PLP+C*
Sbjct: 405 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC* 566
Score = 86.3 bits (182), Expect(2) = 3e-035
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ GRG P HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG
Sbjct: 565 QQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG* 386
Query: 447 DRLSLILLAIGAAPVS 400
+R SLI L P S
Sbjct: 385 ERQSLIRLGASGVPFS 338
Score = 82.6 bits (174), Expect(2) = 3e-035
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = -2 / -3
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVV 121
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KRA+WR P ++
Sbjct: 238 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLFML 59
Query: 120 STFLA 106
FLA
Sbjct: 58 RVFLA 44
>gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016N14f, mRNA sequence
Length = 809
Score = 249 bits (539), Expect = 1e-065
Identities = 106/202 (52%), Positives = 142/202 (70%)
Frame = +2 / +1
Query: 113 KVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSG 292
K L+ + G LH ARF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA +G
Sbjct: 1 KTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALANG 180
Query: 293 EAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIR 472
+ E+ S+F+K+ FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+F+R
Sbjct: 181 DGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVR 360
Query: 473 QDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHRCQDA 652
+ G YLTGEK +SPGEE NKV +A++E K IDP+L+CLKEW+G PLP+C* + +
Sbjct: 361 EVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC*AVDKRR*L 540
Query: 653 RPQEEEMTPYAREEEIKKGVFR 718
+ +E+ + E+ K V R
Sbjct: 541 QKKEKRTRAHKVNIELFKTVKR 606
Score = 86.3 bits (182), Expect(2) = 9e-034
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = -2 / -1
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ GRG P HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG
Sbjct: 515 QQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG* 336
Query: 447 DRLSLILLAIGAAPVS 400
+R SLI L P S
Sbjct: 335 ERQSLIRLGASGVPFS 288
Score = 77.6 bits (163), Expect(2) = 9e-034
Identities = 37/55 (67%), Positives = 40/55 (72%)
Frame = -2 / -1
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSP 136
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KRA+WR P
Sbjct: 188 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPP 24
>gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_E10 5', mRNA sequence
Length = 511
Score = 248 bits (536), Expect = 3e-065
Identities = 102/159 (64%), Positives = 127/159 (79%)
Frame = +2 / +1
Query: 152 ARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSK 331
ARF EK LL IDREAV+ Y +DPCSAN PLM+K+RAVLV+HA +GEAE D SVF+K
Sbjct: 1 ARFCEKDLLLTIDREAVFAYANDPCSANYPLMQKMRAVLVEHALANGEAEHDVETSVFAK 180
Query: 332 INRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKL 511
+ FE+E+R LP+E+EAAR A E G A NRI E RSYPLYRF+R++LG YLTGEK
Sbjct: 181 LATFEQEVRAVLPKEVEAARSAVENGTAAQQNRITECRSYPLYRFVRKELGTEYLTGEKT 360
Query: 512 KSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
+SPGEE +KVF+A+++GK ID +L+CLKEW+G+PLPIC*
Sbjct: 361 RSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPIC* 477
Score = 154 bits (330), Expect = 9e-037
Identities = 80/158 (50%), Positives = 87/158 (55%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ+GRG P HSLR S SM LP A NTL SSPGDL FSPV+Y+ P S R R SGY
Sbjct: 476 QQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGY 297
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR S+I A P S A L NTD S SASPL A ST
Sbjct: 296 DRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVSTSCSASPLAKACST 117
Query: 267 STARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKR 154
STARIF + G AL GS Y TASRS+ R+FS KR
Sbjct: 116 STARIFCMSG*FALHGSFAYANTASRSIVSRRSFSQKR 3
>gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. vulgare cDNA clone HF22M18
5-PRIME, mRNA sequence
Length = 592
Score = 244 bits (527), Expect = 6e-064
Identities = 98/162 (60%), Positives = 125/162 (77%)
Frame = +2 / +1
Query: 143 LHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASV 322
LH ARF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA +G+ E+ S+
Sbjct: 82 LHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALANGDGERALETSI 261
Query: 323 FSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTG 502
F+K+ FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+F+R+ G YLTG
Sbjct: 262 FAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTG 441
Query: 503 EKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
EK +SPGEE NKV +A++E K IDP+L+CLKEW+G PLP+C*
Sbjct: 442 EKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC* 567
Score = 86.3 bits (182), Expect(2) = 6e-033
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ GRG P HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG
Sbjct: 566 QQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG* 387
Query: 447 DRLSLILLAIGAAPVS 400
+R SLI L P S
Sbjct: 386 ERQSLIRLGASGVPFS 339
Score = 74.8 bits (157), Expect(2) = 6e-033
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = -2 / -3
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWR 142
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KRA+WR
Sbjct: 239 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWR 81
>gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. vulgare cDNA clone HF24E14
5-PRIME, mRNA sequence
Length = 592
Score = 244 bits (527), Expect = 6e-064
Identities = 98/162 (60%), Positives = 125/162 (77%)
Frame = +2 / +1
Query: 143 LHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASV 322
LH ARF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA +G+ E+ S+
Sbjct: 82 LHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALANGDGERALETSI 261
Query: 323 FSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTG 502
F+K+ FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+F+R+ G YLTG
Sbjct: 262 FAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTG 441
Query: 503 EKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
EK +SPGEE NKV +A++E K IDP+L+CLKEW+G PLP+C*
Sbjct: 442 EKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC* 567
Score = 86.3 bits (182), Expect(2) = 6e-033
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ GRG P HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG
Sbjct: 566 QQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG* 387
Query: 447 DRLSLILLAIGAAPVS 400
+R SLI L P S
Sbjct: 386 ERQSLIRLGASGVPFS 339
Score = 74.8 bits (157), Expect(2) = 6e-033
Identities = 36/53 (67%), Positives = 39/53 (73%)
Frame = -2 / -3
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWR 142
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KRA+WR
Sbjct: 239 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWR 81
>gb|BM816193.1|BM816193 HC109D04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109D04_T3.ab1 similar to DNA-(apurinic or apyrimidinic
site) lyase,Histidine ammonia-lyase,Phenylalanine
ammonia-lyase,, mRNA sequence
Length = 812
Score = 172 bits (370), Expect(2) = 2e-063
Identities = 74/105 (70%), Positives = 88/105 (83%)
Frame = +2 / +2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 290 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 469
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPI 421
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API
Sbjct: 470 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPI 604
Score = 94.1 bits (199), Expect(2) = 3e-036
Identities = 54/105 (51%), Positives = 57/105 (54%)
Frame = -2 / -3
Query: 426 LAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTSTARIFF 247
+ +GA P SKAT LENT A S S P AWSTSTAR F
Sbjct: 609 VGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTSTARSFC 430
Query: 246 IRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
I G LAL SS TASRSMAV R FSLKRAL RSP +VSTF
Sbjct: 429 ISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTF 295
Score = 90.9 bits (192), Expect(2) = 2e-063
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +2 / +3
Query: 434 KESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLD 586
KESRS+PLYRF+R++LG VYLT EKL SPGEEC K L +S KLIDPML+
Sbjct: 615 KESRSFPLYRFVREELGCVYLTAEKLLSPGEECTKGLLGISPDKLIDPMLE 767
Score = 78.0 bits (164), Expect(2) = 3e-036
Identities = 36/51 (70%), Positives = 37/51 (72%)
Frame = -2 / -2
Query: 585 SSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSL 433
SSMGSMSL L R L+HSSPGD SFS VRYT P S R KRYSG D LSL
Sbjct: 766 SSMGSMSLSGLMPRRPLVHSSPGDSSFSAVRYTQPSSSRTKRYSGNDLLSL 614
>gb|AL505275.1|AL505275 AL505275 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07P09V 5', mRNA sequence
Length = 487
Score = 242 bits (522), Expect = 3e-063
Identities = 102/145 (70%), Positives = 120/145 (82%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARF EK+L+T IDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 52 SKKVLTMNPTGDLSSARFIEKSLITVIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 231
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 232 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 411
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKV 541
+R++LG VYL GEKL SPGEEC KV
Sbjct: 412 VREELGCVYLXGEKLLSPGEECTKV 486
Score = 153 bits (329), Expect = 1e-036
Identities = 81/143 (56%), Positives = 85/143 (59%)
Frame = -2 / -3
Query: 540 TLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXX 361
TL+HSSPGD SFSP RYT P S R KRYSG D LSLI L +GA P SKAT
Sbjct: 485 TLVHSSPGDSSFSPXRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRA 306
Query: 360 XXXXXXXXXXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMA 181
LENT A S S P AWSTSTAR F I G LAL SS TASRSM
Sbjct: 305 DRSSSSNLLILENTVASLSASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMT 126
Query: 180 VSRAFSLKRALWRSPPRLVVSTF 112
V R FS+KRAL RSP +VSTF
Sbjct: 125 VMRLFSMKRALERSPVGFMVSTF 57
>gb|BF261029.2|BF261029 HVSMEf0023J05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023J05f, mRNA sequence
Length = 819
Score = 240 bits (519), Expect = 7e-063
Identities = 105/171 (61%), Positives = 126/171 (73%)
Frame = +2 / +3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 255 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 434
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 435 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 614
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLP 619
+R++LG VYLTGEKL SP + F AL+ P +P P
Sbjct: 615 VREELGCVYLTGEKLLSPARNAPRSFSALARTSSSTPCSSASGSGTARPCP 767
Score = 143 bits (307), Expect(2) = 3e-044
Identities = 78/136 (57%), Positives = 80/136 (58%)
Frame = -2 / -3
Query: 519 GDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXX 340
GD SFSPVRYT P S R KRYSG D LSLI L +GA P SKAT
Sbjct: 667 GDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSN 488
Query: 339 XXXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSL 160
LENT A S S P AWSTSTAR F I G LAL SS TASRSMAV R FSL
Sbjct: 487 LLILENTVASLSASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSL 308
Query: 159 KRALWRSPPRLVVSTF 112
KRAL RSP +VSTF
Sbjct: 307 KRALERSPVGFMVSTF 260
Score = 55.6 bits (115), Expect(2) = 3e-044
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = -2 / -1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPG 517
MGR P HSLR SSMGSMSL L R TL+HSSPG
Sbjct: 768 MGRASPFHSLRHSSMGSMSLFWLMPRKTLVHSSPG 664
>gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_F13 5', mRNA sequence
Length = 513
Score = 237 bits (513), Expect = 5e-062
Identities = 95/158 (60%), Positives = 122/158 (77%)
Frame = +2 / +3
Query: 155 RFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKI 334
RF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA +G+ E+ S+F+K+
Sbjct: 3 RFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALANGDGERALETSIFAKV 182
Query: 335 NRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLK 514
FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+F+R+ G YLTGEK +
Sbjct: 183 AEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTR 362
Query: 515 SPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPIC* 628
SPGEE NKV +A++E K IDP+L+CLKEW+G PLP+C*
Sbjct: 363 SPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPLC* 476
Score = 86.3 bits (182), Expect(2) = 6e-030
Identities = 42/76 (55%), Positives = 46/76 (60%)
Frame = -2 / -3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ GRG P HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG
Sbjct: 475 QQSGRGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG* 296
Query: 447 DRLSLILLAIGAAPVS 400
+R SLI L P S
Sbjct: 295 ERQSLIRLGASGVPFS 248
Score = 64.8 bits (135), Expect(2) = 6e-030
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = -2 / -3
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKR 154
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KR
Sbjct: 148 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKR 2
>gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_C06 5', mRNA sequence
Length = 586
Score = 235 bits (507), Expect(2) = 8e-062
Identities = 96/166 (57%), Positives = 125/166 (75%)
Frame = +2 / +2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+ + G LH ARF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA
Sbjct: 89 AKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALA 268
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G+ E+ S+F+K+ FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+F
Sbjct: 269 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 448
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWD 604
+R+ G YLTGEK +SPGEE NKV +A++E K IDP+L+CLKEW+
Sbjct: 449 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWN 586
Score = 82.6 bits (174), Expect(2) = 4e-031
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = -2 / -2
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVV 121
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KRA+WR P ++
Sbjct: 282 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLFML 103
Query: 120 STFLA 106
FLA
Sbjct: 102 RVFLA 88
Score = 72.5 bits (152), Expect(2) = 4e-031
Identities = 36/67 (53%), Positives = 40/67 (59%)
Frame = -2 / -2
Query: 600 HSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLA 421
HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG +R SLI L
Sbjct: 582 HSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSLIRLG 403
Query: 420 IGAAPVS 400
P S
Sbjct: 402 ASGVPFS 382
Score = 22.6 bits (43), Expect(2) = 8e-062
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 58 HLEENLKSAAR 90
H+EEN+K+A R
Sbjct: 38 HIEENMKTAVR 70
>gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23a16 3', mRNA sequence
Length = 586
Score = 236 bits (510), Expect = 1e-061
Identities = 98/159 (61%), Positives = 124/159 (77%)
Frame = +2 / -2
Query: 176 LTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEEL 355
L IDREAV+ Y DDPCSAN PLMKK+RAVLV+HA +GEAE++ SVF K+ +FE+EL
Sbjct: 582 LQTIDREAVFAYADDPCSANYPLMKKMRAVLVEHALANGEAERNVETSVFGKVAKFEQEL 403
Query: 356 REALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECN 535
LP+E+EAAR A E G A NRI + RSYPLYRF+R++LG VYLTGEK +SPGEE +
Sbjct: 402 CATLPQEVEAARGAVENGTAAEPNRIVDCRSYPLYRFVREELGTVYLTGEKTRSPGEEVD 223
Query: 536 KVFLALSEGKLIDPMLDCLKEWDGKPLPIC*GRHRCQDA 652
KVF+A+++GK ID +L+CLKEW+G+PLPI * +DA
Sbjct: 222 KVFVAMNQGKHIDALLECLKEWNGEPLPIS*SMR*REDA 106
Score = 149 bits (320), Expect = 2e-035
Identities = 78/149 (52%), Positives = 83/149 (55%)
Frame = -2 / +2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
+GRG P HSLR SS SM LP A NTL SSPGD FSPV+YT P S R RY GYDR
Sbjct: 137 IGRGSPFHSLRHSSSASMCLPWFMATNTLSTSSPGDRVFSPVKYTVPSSSRTNRYRGYDR 316
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
S I A P S A L NT+ SASPL A STST
Sbjct: 317 QSTIRFGSAAVPFSTAPLAASTS*GSVAQSSCSNLATLPNTEVSTLRSASPLARACSTST 496
Query: 261 ARIFFIRGELALQGSS*YPYTASRSMAVS 175
ARIFF+RG LALQGSS Y TASRS+ S
Sbjct: 497 ARIFFMRG*LALQGSSAYANTASRSIVWS 583
>gb|AL503927.1|AL503927 AL503927 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03O01T 5', mRNA sequence
Length = 418
Score = 232 bits (500), Expect = 3e-060
Identities = 99/138 (71%), Positives = 116/138 (84%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
+ KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 4 SXKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 183
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 184 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 363
Query: 467 IRQDLGAVYLTGEKLKSP 520
+R++LG VYLTGEKL SP
Sbjct: 364 VREELGCVYLTGEKLLSP 417
Score = 140 bits (301), Expect = 9e-033
Identities = 77/135 (57%), Positives = 79/135 (58%)
Frame = -2 / -3
Query: 519 GDLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXX 340
GD SFSPVRYT P S R KRYSG D LSLI L +GA P SKAT
Sbjct: 416 GDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSN 237
Query: 339 XXXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSL 160
LENT A S S P AWSTSTAR F I G LAL SS TASRSMAV R FSL
Sbjct: 236 LLILENTVASLSASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSL 57
Query: 159 KRALWRSPPRLVVST 115
KRAL RSP +VST
Sbjct: 56 KRALERSPVGFMVST 12
>gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i14 3', mRNA sequence
Length = 595
Score = 231 bits (499), Expect = 4e-060
Identities = 96/169 (56%), Positives = 125/169 (73%)
Frame = +2 / -3
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+ + G LH ARF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA
Sbjct: 539 AKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALA 360
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G+ E+ S+F+K+ FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+F
Sbjct: 359 NGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQF 180
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKP 613
+R+ G YLTGEK +SPGEE NKV +A++E K IDP+L+CLKE +P
Sbjct: 179 VREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKE*TARP 33
Score = 82.6 bits (174), Expect(2) = 2e-031
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = -2 / +1
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVV 121
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KRA+WR P ++
Sbjct: 346 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLFML 525
Query: 120 STFLA 106
FLA
Sbjct: 526 RVFLA 540
Score = 73.5 bits (154), Expect(2) = 2e-031
Identities = 37/72 (51%), Positives = 42/72 (58%)
Frame = -2 / +1
Query: 615 RGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLS 436
+G HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG +R S
Sbjct: 31 QGRAVHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQS 210
Query: 435 LILLAIGAAPVS 400
LI L P S
Sbjct: 211 LIRLGASGVPFS 246
>gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. vulgare cDNA clone HM11E17
3-PRIME, mRNA sequence
Length = 620
Score = 149 bits (319), Expect(4) = 1e-059
Identities = 58/110 (52%), Positives = 78/110 (70%)
Frame = +2 / -3
Query: 284 PSGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYR 463
P+ A S+F+K+ FE+ +R ALP+E+EAAR + E G NRIK+ RSYPLY+
Sbjct: 369 PTATASAPLETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 190
Query: 464 FIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKP 613
F+R+ G YLTGEK +SPGEE NKV +A++E K IDP+L+CLKEW +P
Sbjct: 189 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWTARP 40
Score = 97.3 bits (206), Expect(4) = 1e-059
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +2 / -2
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
A+K L+ + G LH ARF EK LLTAIDREAV+ Y DDPCS N PLM+K+RAVLV+HA
Sbjct: 547 AKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALA 368
Query: 287 SGEAEK 304
+G+ E+
Sbjct: 367 NGDGER 350
Score = 82.6 bits (174), Expect(2) = 2e-031
Identities = 40/65 (61%), Positives = 45/65 (69%)
Frame = -2 / +3
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVV 121
S SPL A STSTAR F I G L L GSS Y TASRS+AVSR+FS KRA+WR P ++
Sbjct: 354 SPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLFML 533
Query: 120 STFLA 106
FLA
Sbjct: 534 RVFLA 548
Score = 73.5 bits (154), Expect(2) = 2e-031
Identities = 37/72 (51%), Positives = 42/72 (58%)
Frame = -2 / +2
Query: 615 RGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLS 436
+G HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG +R S
Sbjct: 38 QGRAVHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQS 217
Query: 435 LILLAIGAAPVS 400
LI L P S
Sbjct: 218 LIRLGASGVPFS 253
Score = 22.6 bits (43), Expect(4) = 1e-059
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 58 HLEENLKSAAR 90
H+EEN+K+A R
Sbjct: 598 HIEENMKTAVR 566
Score = 21.7 bits (41), Expect(4) = 1e-059
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +3 / -3
Query: 603 TASPCPSAEDAT 638
TA PC SAE +T
Sbjct: 51 TARPCHSAEQST 16
>gb|AV931810.1|AV931810 AV931810 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26e14 3', mRNA sequence
Length = 602
Score = 225 bits (486), Expect = 3e-058
Identities = 91/123 (73%), Positives = 107/123 (86%)
Frame = +2 / -3
Query: 254 IRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRI 433
+RAVLVDHA +G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N I
Sbjct: 600 LRAVLVDHALTAGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLI 421
Query: 434 KESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKP 613
KESRS+PLYRF+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+P
Sbjct: 420 KESRSFPLYRFVREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEP 241
Query: 614 LPI 622
LPI
Sbjct: 240 LPI 232
Score = 144 bits (309), Expect = 7e-034
Identities = 72/122 (59%), Positives = 74/122 (60%)
Frame = -2 / +2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 233 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 412
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 413 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 592
Query: 261 AR 256
AR
Sbjct: 593 AR 598
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / +1
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 223 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 402
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 403 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 531
>gb|BM370557.2|BM370557 EBro08_SQ004_J10_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J10 5', mRNA sequence
Length = 620
Score = 221 bits (476), Expect = 6e-057
Identities = 88/138 (63%), Positives = 114/138 (82%)
Frame = +2 / +2
Query: 215 DDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAARV 394
DDPCSAN PLMKK+RAVLV+HA +GEAE++ SVF+K+ +FE+EL LP+E+EAAR
Sbjct: 5 DDPCSANYPLMKKMRAVLVEHALANGEAERNVETSVFAKVAKFEQELCATLPQEVEAARG 184
Query: 395 AFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLID 574
A E G A NRI + RSYPLYRF+R++LG VYLTGEK +SPGEE +KVF+A+++GK ID
Sbjct: 185 AVENGTAAEPNRIVDCRSYPLYRFVREELGTVYLTGEKTRSPGEEVDKVFVAMNQGKHID 364
Query: 575 PMLDCLKEWDGKPLPIC* 628
+L+CLKEW+G+PLP+C*
Sbjct: 365 ALLECLKEWNGEPLPLC* 418
Score = 138 bits (297), Expect = 3e-032
Identities = 72/137 (52%), Positives = 75/137 (54%)
Frame = -2 / -3
Query: 624 QMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYD 445
Q GRG P HSLR SS SM LP A NTL SSPGD FSPV+YT P S R RY GYD
Sbjct: 414 QRGRGSPFHSLRHSSSASMCLPWFIATNTLSTSSPGDRVFSPVKYTVPSSSRTNRYRGYD 235
Query: 444 RLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTS 265
R S I A P S A L NT+ SASPL A STS
Sbjct: 234 RQSTIRFGSAAVPFSTAPLAASTS*GSVAHSSCSNLATLANTEVSTLRSASPLAKACSTS 55
Query: 264 TARIFFIRGELALQGSS 214
TARIFF+RG LALQGSS
Sbjct: 54 TARIFFMRG*LALQGSS 4
>gb|AV919005.1|AV919005 AV919005 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22p22 3', mRNA sequence
Length = 572
Score = 220 bits (475), Expect = 9e-057
Identities = 89/120 (74%), Positives = 104/120 (86%)
Frame = +2 / -1
Query: 263 VLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKES 442
VLVDHA +G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKES
Sbjct: 569 VLVDHALTAGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKES 390
Query: 443 RSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
RS+PLYRF+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 389 RSFPLYRFVREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 210
Score = 140 bits (300), Expect = 1e-032
Identities = 70/120 (58%), Positives = 72/120 (60%)
Frame = -2 / +1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 211 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 390
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWSTST 262
LSLI L +GA P SKAT LENT A S S P AWSTST
Sbjct: 391 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPAVRAWSTST 570
Score = 100 bits (214), Expect(2) = 7e-022
Identities = 46/73 (63%), Positives = 51/73 (69%)
Frame = -1 / +3
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 201 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 380
Query: 451 VRPALLDPVGDRR 413
RPALLD VGD R
Sbjct: 381 ERPALLDQVGDGR 419
Score = 23.1 bits (44), Expect(2) = 7e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 355 QLLLEPVDLGE 323
QLLLE VDLGE
Sbjct: 477 QLLLELVDLGE 509
>gb|BJ459164.1|BJ459164 BJ459164 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak34p05 3', mRNA sequence
Length = 691
Score = 216 bits (467), Expect = 1e-055
Identities = 88/137 (64%), Positives = 111/137 (81%)
Frame = +2 / -1
Query: 221 PCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAARVAF 400
PCSAN PLM+K+RAVLV+HA +GEAE+D SVF+K+ FE+ELR LP+E+EAAR A
Sbjct: 676 PCSANYPLMQKMRAVLVEHALANGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAV 497
Query: 401 ETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPM 580
E G A NRI E RSYPLYRF+R++LG YLTGEK +SPGEE +KVF+A+++GK ID +
Sbjct: 496 ENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDAL 317
Query: 581 LDCLKEWDGKPLPIC*G 631
L+CLK W+G+PLPIC*G
Sbjct: 316 LECLKGWNGEPLPIC*G 266
Score = 127 bits (273), Expect = 6e-029
Identities = 70/145 (48%), Positives = 76/145 (52%)
Frame = -2 / +3
Query: 654 LASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRS 475
L+S H P Q+GRG P LR SS SM LP A NTL SSPGDL FSPV+Y+ P S
Sbjct: 243 LSSVHVLDP*QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSS 422
Query: 474 WRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSA 295
R R SGYDR S+I A P S A L NTD S SA
Sbjct: 423 LRTNR*SGYDRHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSA 602
Query: 294 SPLGGAWSTSTARIFFIRGELALQG 220
SPL A ST TARIF + G LAL G
Sbjct: 603 SPLAXACSTRTARIFCMSG*LALXG 677
>gb|AV928004.1|AV928004 AV928004 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j05 3', mRNA sequence
Length = 609
Score = 208 bits (449), Expect(2) = 2e-055
Identities = 83/112 (74%), Positives = 98/112 (87%)
Frame = +2 / -2
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 566 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 387
Query: 467 IRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
+R++LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 386 VREELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 231
Score = 127 bits (273), Expect(2) = 2e-030
Identities = 64/111 (57%), Positives = 66/111 (59%)
Frame = -2 / +1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 232 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 411
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASP 289
LSLI L +GA P SKAT LENT A S S P
Sbjct: 412 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGP 564
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / +3
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 222 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 401
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 402 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 530
Score = 28.1 bits (55), Expect(2) = 2e-055
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 245 MKKIRAVLVDHAP 283
M+K+RAVLVDH P
Sbjct: 609 MQKLRAVLVDHGP 571
Score = 24.4 bits (47), Expect(2) = 2e-030
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +2
Query: 282 GAWSTSTARIF 250
G WSTSTAR F
Sbjct: 572 GPWSTSTARSF 604
>gb|AV912724.1|AV912724 AV912724 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10a01 5', mRNA sequence
Length = 618
Score = 131 bits (281), Expect(3) = 1e-054
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 187 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 366
Query: 287 SGEAEKDASASVFSKINRFEEEL 355
+G E ++ A+VFSKIN+FEEEL
Sbjct: 367 AGPGEAESEATVFSKINKFEEEL 435
Score = 84.0 bits (177), Expect(3) = 1e-054
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2 / +2
Query: 353 LREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLG 484
LR ALPRE+EAARVAFE G API N IKESRS+PLYRF+R++LG
Sbjct: 434 LRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELG 565
Score = 83.1 bits (175), Expect(3) = 3e-029
Identities = 46/72 (63%), Positives = 47/72 (65%)
Frame = -2 / -2
Query: 327 ENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRAL 148
ENT A S S P AWSTSTAR F I G LAL SS TASRSMAV R FSLKRAL
Sbjct: 407 ENTVASLSASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRAL 228
Query: 147 WRSPPRLVVSTF 112
RSP +VSTF
Sbjct: 227 ERSPVGFMVSTF 192
Score = 45.5 bits (93), Expect(3) = 3e-029
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -1 / -3
Query: 484 AEVLADEAVQRVRPALLDPVGDRR 413
AE+LADEAVQR RPALLD VGD R
Sbjct: 565 AELLADEAVQRERPALLDQVGDGR 494
Score = 37.7 bits (76), Expect(3) = 3e-029
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -3
Query: 534 LHSSPGDLSFSPVRYT 487
+HSSPGD SFSPVRYT
Sbjct: 616 VHSSPGDSSFSPVRYT 569
Score = 36.8 bits (74), Expect(3) = 1e-054
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 488 VYLTGEKLKSPGEEC 532
VYLTGEKL SPGEEC
Sbjct: 570 VYLTGEKLLSPGEEC 614
>gb|BI777236.2|BI777236 EBro03_SQ002_I15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_I15 5', mRNA sequence
Length = 445
Score = 213 bits (459), Expect = 1e-054
Identities = 84/147 (57%), Positives = 111/147 (75%)
Frame = +2 / +3
Query: 173 LLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEE 352
+LT IDREA + Y DDPCS N PLM+K+RAVLV+HA +G+ E+ S+F+K+ FE+
Sbjct: 3 VLTGIDREAPFAYADDPCSPNYPLMQKLRAVLVEHALANGDGERALETSIFAKVAEFEQN 182
Query: 353 LREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEEC 532
+R ALP+E+EAAR + E G NRIK+ RSYPLY+F+R+ G YLTGEK +SPGEE
Sbjct: 183 IRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFVREVCGTEYLTGEKTRSPGEEL 362
Query: 533 NKVFLALSEGKLIDPMLDCLKEWDGKP 613
NKV +A++E K IDP+L+CLKEW+G P
Sbjct: 363 NKVLVAMNERKHIDPLLECLKEWNGAP 443
Score = 79.4 bits (167), Expect(2) = 5e-023
Identities = 39/72 (54%), Positives = 43/72 (59%)
Frame = -2 / -1
Query: 615 RGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDRLS 436
RG P HSLR SS GSM L S A +TL SSPGD FSPVRY+ P + R SG +R S
Sbjct: 445 RGAPFHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQS 266
Query: 435 LILLAIGAAPVS 400
LI L P S
Sbjct: 265 LIRLGASGVPFS 230
Score = 48.3 bits (99), Expect(2) = 5e-023
Identities = 26/42 (61%), Positives = 27/42 (64%)
Frame = -2 / -1
Query: 300 SASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVS 175
S SPL A STSTAR F I G L L GSS Y ASRS+ VS
Sbjct: 130 SPSPLASACSTSTARSFCISG*LGLHGSSAYANGASRSIPVS 5
>gb|AV919026.1|AV919026 AV919026 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4b16 3', mRNA sequence
Length = 659
Score = 203 bits (437), Expect(2) = 7e-054
Identities = 82/131 (62%), Positives = 106/131 (80%)
Frame = +2 / -2
Query: 236 SPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAA 415
+PLM+K+RAVLV+HA +GEAE D SVF+K+ FE+E+R LP+E+EAAR A E G A
Sbjct: 625 TPLMQKMRAVLVEHALANGEAEHDVETSVFAKLATFEQEVRAVLPKEVEAARSAVENGTA 446
Query: 416 PIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLK 595
NRI E RSYPLYRF+R++LG YLTGEK +SPGEE +KVF+A+++GK ID +L+CLK
Sbjct: 445 AQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLK 266
Query: 596 EWDGKPLPIC* 628
EW+G+PLPIC*
Sbjct: 265 EWNGEPLPIC* 233
Score = 128 bits (274), Expect = 5e-029
Identities = 65/130 (50%), Positives = 70/130 (53%)
Frame = -2 / +3
Query: 627 QQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGY 448
QQ+GRG P HSLR S SM LP A NTL SSPGDL FSPV+Y+ P S R R SGY
Sbjct: 234 QQIGRGSPFHSLRHSRSASMCLPWFMATNTLSTSSPGDLVFSPVKYSVPSSLRTNR*SGY 413
Query: 447 DRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPLGGAWST 268
DR S+I A P S A L NTD S SASPL A ST
Sbjct: 414 DRHSVIRFCCAAVPFSTALLAASTSFGSTARTSCSNVASLANTDVSTSCSASPLAKACST 593
Query: 267 STARIFFIRG 238
STARIF + G
Sbjct: 594 STARIFCMSG 623
Score = 28.1 bits (55), Expect(2) = 7e-054
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 203 YGYYDDPCSANSP 241
+ Y DDPCSAN P
Sbjct: 659 FAYADDPCSANYP 621
>gb|AV918666.1|AV918666 AV918666 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21n01 3', mRNA sequence
Length = 670
Score = 207 bits (447), Expect = 6e-053
Identities = 84/137 (61%), Positives = 109/137 (79%)
Frame = +2 / -2
Query: 221 PCSANSPLMKKIRAVLVDHAPPSGEAEKDASASVFSKINRFEEELREALPREMEAARVAF 400
P + +PLM+K+RAVLV+HA +GEAE+D SVF+K+ FE+ELR LP+E+EAAR A
Sbjct: 651 PAAPTTPLMQKMRAVLVEHALANGEAERDVETSVFAKLAMFEQELRAMLPKEVEAARSAV 472
Query: 401 ETGAAPIANRIKESRSYPLYRFIRQDLGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPM 580
E G A NRI E RSYPLYRF+R++LG YLTGEK +SPGEE +KVF+A+++GK ID +
Sbjct: 471 ENGTATQQNRITECRSYPLYRFVRKELGTEYLTGEKTRSPGEEVDKVFVAMNKGKHIDAL 292
Query: 581 LDCLKEWDGKPLPIC*G 631
L+CLK W+G+PLPIC*G
Sbjct: 291 LECLKGWNGEPLPIC*G 241
Score = 122 bits (262), Expect = 2e-027
Identities = 67/145 (46%), Positives = 74/145 (51%)
Frame = -2 / +2
Query: 654 LASWHRWRPQQMGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRS 475
L+S H P Q+GRG P LR SS SM LP A NTL SSPGDL FSPV+Y+ P S
Sbjct: 218 LSSVHVLDP*QIGRGSPFQPLRHSSSASMCLPLFIATNTLSTSSPGDLVFSPVKYSVPSS 397
Query: 474 WRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSA 295
R R SGYDR S+I A P S A L NTD S SA
Sbjct: 398 LRTNR*SGYDRHSVIRFCCVAVPFSTALRAASTSFGNIARSSCSNMASLANTDVSTSRSA 577
Query: 294 SPLGGAWSTSTARIFFIRGELALQG 220
SPL A ST TARIF + G + G
Sbjct: 578 SPLAKACSTRTARIFCMSGVVGAAG 652
>gb|CB880955.1|CB880955 HM08F11w HM Hordeum vulgare subsp. vulgare cDNA clone HM08F11
3-PRIME, mRNA sequence
Length = 596
Score = 205 bits (443), Expect = 2e-052
Identities = 82/108 (75%), Positives = 96/108 (88%)
Frame = +2 / -3
Query: 299 EKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQD 478
E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF+R++
Sbjct: 594 EAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREE 415
Query: 479 LGAVYLTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LG VYLTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 414 LGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 271
Score = 125 bits (267), Expect = 4e-028
Identities = 63/108 (58%), Positives = 65/108 (60%)
Frame = -2 / +2
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 272 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 451
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFS 298
LSLI L +GA P SKAT LENT A S S
Sbjct: 452 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSAS 595
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / +1
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 262 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 441
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 442 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 570
>gb|BE214036.1|BE214036 HV_CEb0001P14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001P14f, mRNA sequence
Length = 963
Score = 186 bits (401), Expect(3) = 4e-052
Identities = 83/137 (60%), Positives = 95/137 (69%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
ARK L+T G LH ARF EK LL IDREAV+ Y DDPCS N PLM+K+RAVLV+HA
Sbjct: 238 ARKTLSTDNNGHLHKARFCEKDLLLTIDREAVFAYADDPCSVNYPLMQKMRAVLVEHALA 417
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+GEAE D SVF+K+ FE+ELR LP E+EAAR A E G A NRI E RSYPLYR
Sbjct: 418 NGEAEHDVETSVFAKLATFEQELRAVLPTEVEAARSAVENGTAAQQNRIXECRSYPLYRV 597
Query: 467 IRQDLGAVYLTGEKLKS 517
R+ YLTGEK +S
Sbjct: 598 XRKGAWTEYLTGEKTRS 648
Score = 118 bits (253), Expect(2) = 4e-028
Identities = 65/137 (47%), Positives = 71/137 (51%)
Frame = -2 / -2
Query: 516 DLSFSPVRYTAPRSWRMKRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXX 337
D FSPV+Y+ R R SGYDR S I A P S A
Sbjct: 647 DRVFSPVKYSVQAPLRXTR*SGYDRHSXIRFCCAAVPFSTALRAASTSVGNTARSSCSNV 468
Query: 336 XXLENTDALASFSASPLGGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLK 157
L NTD S SASPL A ST TARIF + G L LQGSS Y TASRS+ R+FS K
Sbjct: 467 ASLANTDVSTSCSASPLAKACSTRTARIFCMSG*LTLQGSSAYANTASRSIVSRRSFSQK 288
Query: 156 RALWRSPPRLVVSTFLA 106
RALWR P V+S FLA
Sbjct: 287 RALWRWPLLSVLSVFLA 237
Score = 29.9 bits (59), Expect(3) = 4e-052
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2 / +3
Query: 500 GEKLKSPGEECNKVFLALSEGKLIDPMLDCLKE 598
GE G + F+A+++GK I P+ +CLKE
Sbjct: 633 GEDAVFLGMRWARWFVAMNQGKHIXPLPECLKE 731
Score = 27.2 bits (53), Expect(3) = 4e-052
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1 / +1
Query: 22 NWGKAAAELTGSHLEENLKSAARA 93
+W + A + +HLEEN+K+A ++
Sbjct: 151 SWSRCARLSSCAHLEENVKNAVKS 222
Score = 26.3 bits (51), Expect(2) = 4e-028
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / -2
Query: 601 PLLEAVEHGVDELALAEGQE 542
PLL+A+ VD LAL G E
Sbjct: 734 PLLQALRERVDVLALVHGNE 675
>gb|AV930308.1|AV930308 AV930308 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd21p01 3', mRNA sequence
Length = 560
Score = 202 bits (436), Expect = 2e-051
Identities = 81/103 (78%), Positives = 93/103 (90%)
Frame = +2 / -1
Query: 314 ASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVY 493
A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF+R++LG VY
Sbjct: 560 ATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCVY 381
Query: 494 LTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 380 LTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 252
Score = 123 bits (263), Expect = 1e-027
Identities = 60/101 (59%), Positives = 62/101 (61%)
Frame = -2 / +1
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 253 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 432
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENT 319
LSLI L +GA P SKAT LENT
Sbjct: 433 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENT 555
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / +3
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 243 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 422
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 423 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 551
>gb|AV931809.1|AV931809 AV931809 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26e13 3', mRNA sequence
Length = 564
Score = 202 bits (436), Expect = 2e-051
Identities = 81/103 (78%), Positives = 93/103 (90%)
Frame = +2 / -3
Query: 314 ASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRFIRQDLGAVY 493
A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF+R++LG VY
Sbjct: 559 ATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELGCVY 380
Query: 494 LTGEKLKSPGEECNKVFLALSEGKLIDPMLDCLKEWDGKPLPI 622
LTGEKL SPGEEC KVFL +S+ KLIDPML+CLKEW+G+PLPI
Sbjct: 379 LTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPI 251
Score = 123 bits (264), Expect = 1e-027
Identities = 61/103 (59%), Positives = 63/103 (61%)
Frame = -2 / +3
Query: 621 MGRGLPSHSLRQSSMGSMSLPSLRARNTLLHSSPGDLSFSPVRYTAPRSWRMKRYSGYDR 442
MGRG P HSLR SSMGSMSL L R TL+HSSPGD SFSPVRYT P S R KRYSG D
Sbjct: 252 MGRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDL 431
Query: 441 LSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDA 313
LSLI L +GA P SKAT LENT A
Sbjct: 432 LSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVA 560
Score = 114 bits (244), Expect = 6e-025
Identities = 57/103 (55%), Positives = 62/103 (60%)
Frame = -1 / +2
Query: 631 SSADGQGLAVPLLEAVEHGVDELALAEGQEHXXXXXXXXXXXXXGQVHGAEVLADEAVQR 452
S DGQGLAVPLLEA+EHGVDEL LA+ +E G+VH AE+LADEAVQR
Sbjct: 242 SDVDGQGLAVPLLEALEHGVDELVLADAEEDLGAFLAGGQQLLAGEVHAAELLADEAVQR 421
Query: 451 VRPALLDPVGDRRXXXXXXXXXXXXXXGQRLAQLLLEPVDLGE 323
RPALLD VGD R Q QLLLE VDLGE
Sbjct: 422 ERPALLDQVGDGRRAVLEGHAGGLDLPRQGRPQLLLELVDLGE 550
>gb|BI957553.1|BI957553 HVSMEn0010B19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010B19f, mRNA sequence
Length = 633
Score = 202 bits (435), Expect = 3e-051
Identities = 86/121 (71%), Positives = 102/121 (84%)
Frame = +2 / +1
Query: 107 ARKVLTTSLGGDLHSARFSEKALLTAIDREAVYGYYDDPCSANSPLMKKIRAVLVDHAPP 286
++KVLT + GDL SARFSEK+L+TAIDREAV+ Y DD CSAN PLM+K+RAVLVDHA
Sbjct: 271 SKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALT 450
Query: 287 SGEAEKDASASVFSKINRFEEELREALPREMEAARVAFETGAAPIANRIKESRSYPLYRF 466
+G E ++ A+VFSKIN+FEEELR ALPRE+EAARVAFE G API N IKESRS+PLYRF
Sbjct: 451 AGPGEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 630
Query: 467 I 469
+
Sbjct: 631 V 633
Score = 115 bits (245), Expect = 5e-025
Identities = 65/118 (55%), Positives = 67/118 (56%)
Frame = -2 / -2
Query: 465 KRYSGYDRLSLILLAIGAAPVSKATXXXXXXXXXXXXXXXXXXXXLENTDALASFSASPL 286
KRYSG D LSLI L +GA P SKAT LENT A S S P
Sbjct: 629 KRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASPGPA 450
Query: 285 GGAWSTSTARIFFIRGELALQGSS*YPYTASRSMAVSRAFSLKRALWRSPPRLVVSTF 112
AWSTSTAR F I G LAL SS TASRSMAV R FSLKRAL RSP +VSTF
Sbjct: 449 VRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTF 276
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 320,162,678
Number of Sequences: 312970
Number of extensions: 4966591
Number of successful extensions: 55977
Number of sequences better than 1.0e-020: 186
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10483831011
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)