TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829483.2.1
(1069 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 146 4e-072
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 146 1e-071
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 144 2e-071
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 114 5e-067
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 146 1e-066
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 144 1e-066
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 146 3e-066
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 136 3e-064
gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedl... 142 2e-063
gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA li... 120 6e-062
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 138 2e-061
gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA li... 120 5e-060
gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA li... 122 2e-059
gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA li... 120 4e-059
gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Libr... 120 1e-058
gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA li... 136 3e-058
gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA li... 122 2e-057
gb|BJ548512.1|BJ548512 BJ548512 K. Sato unpublished cDNA li... 122 2e-057
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 146 5e-057
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 135 1e-056
gb|BJ548403.1|BJ548403 BJ548403 K. Sato unpublished cDNA li... 122 1e-055
gb|BJ548926.1|BJ548926 BJ548926 K. Sato unpublished cDNA li... 122 1e-055
gb|BJ548749.1|BJ548749 BJ548749 K. Sato unpublished cDNA li... 122 5e-055
gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. v... 121 7e-055
gb|BJ549023.1|BJ549023 BJ549023 K. Sato unpublished cDNA li... 122 3e-054
gb|AV936388.1|AV936388 AV936388 K. Sato unpublished cDNA li... 122 3e-054
gb|BJ548710.1|BJ548710 BJ548710 K. Sato unpublished cDNA li... 122 3e-054
gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Libr... 120 7e-054
gb|BJ548248.1|BJ548248 BJ548248 K. Sato unpublished cDNA li... 120 2e-053
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 146 3e-053
gb|AV935988.1|AV935988 AV935988 K. Sato unpublished cDNA li... 122 5e-052
gb|BJ547998.1|BJ547998 BJ547998 K. Sato unpublished cDNA li... 122 5e-052
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 105 1e-051
gb|BJ548529.1|BJ548529 BJ548529 K. Sato unpublished cDNA li... 122 2e-051
gb|BJ548320.1|BJ548320 BJ548320 K. Sato unpublished cDNA li... 122 2e-051
gb|AV927871.1|AV927871 AV927871 K. Sato unpublished cDNA li... 122 2e-051
gb|BJ548174.1|BJ548174 BJ548174 K. Sato unpublished cDNA li... 122 7e-051
gb|BJ548536.1|BJ548536 BJ548536 K. Sato unpublished cDNA li... 122 7e-051
gb|AV937000.1|AV937000 AV937000 K. Sato unpublished cDNA li... 122 7e-051
gb|AV929870.1|AV929870 AV929870 K. Sato unpublished cDNA li... 122 1e-050
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 146 3e-050
gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedl... 124 8e-050
gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedl... 121 4e-049
gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. v... 139 8e-049
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 146 2e-048
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 146 3e-048
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 146 3e-048
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 146 3e-048
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 115 9e-048
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 115 2e-047
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 115 4e-047
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 115 4e-047
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 140 8e-046
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 76 8e-046
gb|BJ548976.1|BJ548976 BJ548976 K. Sato unpublished cDNA li... 122 1e-045
gb|AV936756.1|AV936756 AV936756 K. Sato unpublished cDNA li... 122 1e-045
gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare s... 100 2e-045
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 105 6e-045
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 135 7e-045
gb|BJ548840.1|BJ548840 BJ548840 K. Sato unpublished cDNA li... 122 7e-045
gb|BI949705.1|BI949705 HVSMEl0015H08f Hordeum vulgare spike... 120 7e-045
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 135 7e-045
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 134 1e-044
gb|AV928806.1|AV928806 AV928806 K. Sato unpublished cDNA li... 122 2e-044
gb|BF255671.2|BF255671 HVSMEf0007H20f Hordeum vulgare seedl... 105 6e-044
gb|BJ547972.1|BJ547972 BJ547972 K. Sato unpublished cDNA li... 122 9e-044
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 103 2e-043
gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedl... 120 3e-043
gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedl... 124 4e-043
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 136 6e-043
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 124 7e-043
gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. v... 74 2e-042
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 115 6e-042
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 124 1e-041
gb|AJ435107.1|AJ435107 AJ435107 S00002 Hordeum vulgare subs... 102 1e-041
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 74 2e-041
gb|BG368482.1|BG368482 HVSMEi0019D10f Hordeum vulgare 20 DA... 117 3e-041
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 130 7e-041
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 114 9e-041
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 99 1e-040
gb|CA012898.1|CA012898 HT06M15r HT Hordeum vulgare subsp. v... 96 1e-040
gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedl... 121 1e-040
gb|BI949114.1|BI949114 HVSMEl0012G22f Hordeum vulgare spike... 114 1e-040
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 120 2e-040
gb|BJ548533.1|BJ548533 BJ548533 K. Sato unpublished cDNA li... 122 2e-040
gb|AV931720.1|AV931720 AV931720 K. Sato unpublished cDNA li... 122 2e-040
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 120 2e-040
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 115 2e-040
gb|BJ548881.1|BJ548881 BJ548881 K. Sato unpublished cDNA li... 95 2e-040
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 99 2e-040
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 99 2e-040
gb|BJ548842.1|BJ548842 BJ548842 K. Sato unpublished cDNA li... 122 8e-040
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 99 9e-040
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 99 9e-040
gb|BI953646.1|BI953646 HVSMEm0013K24f Hordeum vulgare green... 123 3e-039
gb|AV936609.1|AV936609 AV936609 K. Sato unpublished cDNA li... 122 3e-039
gb|BI954877.1|BI954877 HVSMEm0020D03f Hordeum vulgare green... 120 3e-039
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 115 3e-039
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 116 4e-039
gb|BI778185.2|BI778185 EBro07_SQ002_H11_R root, 3 week, red... 120 1e-038
gb|BI948082.1|BI948082 HVSMEl0008C04f Hordeum vulgare spike... 111 1e-038
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 74 1e-038
gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedl... 85 2e-038
gb|BE602564.3|BE602564 HVSMEh0100A01f Hordeum vulgare 5-45 ... 120 3e-038
gb|BJ547042.1|BJ547042 BJ547042 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547797.1|BJ547797 BJ547797 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547881.1|BJ547881 BJ547881 K. Sato unpublished cDNA li... 120 3e-038
gb|AV926646.1|AV926646 AV926646 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547768.1|BJ547768 BJ547768 K. Sato unpublished cDNA li... 120 3e-038
gb|BE216017.1|BE216017 HV_CEb0009C05f Hordeum vulgare seedl... 120 3e-038
gb|BJ547685.1|BJ547685 BJ547685 K. Sato unpublished cDNA li... 120 3e-038
gb|AV934138.1|AV934138 AV934138 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547661.1|BJ547661 BJ547661 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ469586.1|BJ469586 BJ469586 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547290.1|BJ547290 BJ547290 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547528.1|BJ547528 BJ547528 K. Sato unpublished cDNA li... 120 3e-038
gb|AV933046.1|AV933046 AV933046 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547269.1|BJ547269 BJ547269 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547507.1|BJ547507 BJ547507 K. Sato unpublished cDNA li... 120 3e-038
gb|AV923513.1|AV923513 AV923513 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ546949.1|BJ546949 BJ546949 K. Sato unpublished cDNA li... 120 3e-038
gb|AV923424.1|AV923424 AV923424 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ546871.1|BJ546871 BJ546871 K. Sato unpublished cDNA li... 120 3e-038
gb|BJ547611.1|BJ547611 BJ547611 K. Sato unpublished cDNA li... 120 3e-038
gb|AV926802.1|AV926802 AV926802 K. Sato unpublished cDNA li... 120 3e-038
gb|AV924773.1|AV924773 AV924773 K. Sato unpublished cDNA li... 120 3e-038
gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedl... 114 3e-038
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 104 4e-038
gb|BI953138.1|BI953138 HVSMEm0011D12f Hordeum vulgare green... 120 5e-038
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 99 5e-038
gb|BF626393.3|BF626393 HVSMEa0018A21f Hordeum vulgare seedl... 106 7e-038
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 121 9e-038
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 74 9e-038
gb|BI947656.1|BI947656 HVSMEl0006E19f Hordeum vulgare spike... 118 2e-037
gb|BF259240.3|BF259240 HVSMEf0018G18f Hordeum vulgare seedl... 124 2e-037
gb|AV934268.1|AV934268 AV934268 K. Sato unpublished cDNA li... 117 2e-037
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 123 3e-037
gb|BF626269.2|BF626269 HVSMEa0018D07f Hordeum vulgare seedl... 106 4e-037
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 113 4e-037
gb|BI949614.1|BI949614 HVSMEl0014O15f Hordeum vulgare spike... 115 8e-037
gb|AV926037.1|AV926037 AV926037 K. Sato unpublished cDNA li... 115 8e-037
gb|AV925064.1|AV925064 AV925064 K. Sato unpublished cDNA li... 115 8e-037
gb|BJ548020.1|BJ548020 BJ548020 K. Sato unpublished cDNA li... 95 8e-037
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 104 8e-037
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 74 2e-036
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 99 3e-036
gb|AV933552.1|AV933552 AV933552 K. Sato unpublished cDNA li... 113 4e-036
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 97 5e-036
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 61 7e-036
gb|BI952820.1|BI952820 HVSMEm0007N21f Hordeum vulgare green... 112 7e-036
gb|BE216067.2|BE216067 HV_CEb0009E21f Hordeum vulgare seedl... 69 1e-035
gb|AV931694.1|AV931694 AV931694 K. Sato unpublished cDNA li... 95 1e-035
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 99 2e-035
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 103 3e-035
gb|CA018522.1|CA018522 HV08O01r HV Hordeum vulgare subsp. v... 122 3e-035
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 99 3e-035
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 83 3e-035
gb|BI953615.1|BI953615 HVSMEm0013J07f Hordeum vulgare green... 109 4e-035
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 104 5e-035
gb|BI952081.1|BI952081 HVSMEm0004I21f Hordeum vulgare green... 108 5e-035
gb|BG342989.2|BG342989 HVSMEg0001J14f Hordeum vulgare pre-a... 108 1e-034
gb|BF259824.3|BF259824 HVSMEf0020F20f Hordeum vulgare seedl... 109 1e-034
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 99 6e-034
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 74 1e-033
gb|BJ548805.1|BJ548805 BJ548805 K. Sato unpublished cDNA li... 95 1e-033
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 61 5e-033
gb|BI948427.1|BI948427 HVSMEl0009I08f Hordeum vulgare spike... 102 7e-033
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 92 2e-032
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 92 2e-032
gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedl... 92 2e-032
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 92 2e-032
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 92 2e-032
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 92 2e-032
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 74 3e-032
gb|AV936523.1|AV936523 AV936523 K. Sato unpublished cDNA li... 95 4e-032
gb|BF623115.2|BF623115 HVSMEa0014H14f Hordeum vulgare seedl... 115 7e-032
gb|AV932402.1|AV932402 AV932402 K. Sato unpublished cDNA li... 99 9e-032
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 99 1e-031
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 92 2e-031
gb|BF622044.2|BF622044 HVSMEa0001J20f Hordeum vulgare seedl... 100 2e-031
gb|AV928835.1|AV928835 AV928835 K. Sato unpublished cDNA li... 95 2e-031
gb|BQ767689.1|BQ767689 EBro08_SQ009_H13_R root, 3 week, dro... 85 3e-031
gb|BJ547072.1|BJ547072 BJ547072 K. Sato unpublished cDNA li... 96 6e-031
gb|AV923925.1|AV923925 AV923925 K. Sato unpublished cDNA li... 96 6e-031
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 92 1e-030
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 86 1e-030
gb|AV930169.1|AV930169 AV930169 K. Sato unpublished cDNA li... 95 1e-030
gb|BI947132.1|BI947132 HVSMEl0003N16f Hordeum vulgare spike... 86 2e-030
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 74 3e-030
gb|BE214864.3|BE214864 HV_CEb0004O15f Hordeum vulgare seedl... 72 3e-030
gb|BJ547849.1|BJ547849 BJ547849 K. Sato unpublished cDNA li... 94 3e-030
gb|BJ546858.1|BJ546858 BJ546858 K. Sato unpublished cDNA li... 94 3e-030
gb|BJ547741.1|BJ547741 BJ547741 K. Sato unpublished cDNA li... 94 3e-030
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 92 3e-030
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 92 3e-030
gb|BJ546927.1|BJ546927 BJ546927 K. Sato unpublished cDNA li... 103 4e-030
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 105 4e-030
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 92 5e-030
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 92 5e-030
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 92 5e-030
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 92 5e-030
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 92 5e-030
gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm librar... 65 5e-030
gb|AJ435050.1|AJ435050 AJ435050 S00002 Hordeum vulgare subs... 106 1e-029
gb|CA027071.1|CA027071 HZ57M23r HZ Hordeum vulgare subsp. v... 96 1e-029
gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedl... 103 2e-029
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 99 3e-029
gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedl... 88 3e-029
gb|BJ546968.1|BJ546968 BJ546968 K. Sato unpublished cDNA li... 90 4e-029
gb|BJ547144.1|BJ547144 BJ547144 K. Sato unpublished cDNA li... 90 4e-029
gb|AV931548.1|AV931548 AV931548 K. Sato unpublished cDNA li... 122 7e-029
gb|BE411006.1|BE411006 ISC001.D03F990519 ITEC ISC Barley Le... 99 7e-029
gb|BJ548395.1|BJ548395 BJ548395 K. Sato unpublished cDNA li... 122 9e-029
gb|BQ664112.1|BQ664112 HV01N17w HV Hordeum vulgare subsp. v... 89 9e-029
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 92 1e-028
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 92 1e-028
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 92 1e-028
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 97 1e-028
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 92 1e-028
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 92 1e-028
gb|BF268066.2|BF268066 HV_CEa0019M05f Hordeum vulgare seedl... 89 2e-028
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 62 3e-028
gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedl... 79 3e-028
gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedl... 84 3e-028
gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachi... 92 3e-028
gb|BI948019.1|BI948019 HVSMEl0007N21f Hordeum vulgare spike... 86 4e-028
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 104 4e-028
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 90 5e-028
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 104 6e-028
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 104 6e-028
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 104 6e-028
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 104 6e-028
gb|BF267688.2|BF267688 HV_CEa0018J20f Hordeum vulgare seedl... 89 1e-027
gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedl... 82 2e-027
gb|BF623515.3|BF623515 HVSMEa0002H21f Hordeum vulgare seedl... 65 2e-027
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 92 2e-027
gb|BF265689.1|BF265689 HV_CEa0013B06f Hordeum vulgare seedl... 92 2e-027
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 59 2e-027
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 61 2e-027
gb|AL450970.1|AL450970 AL450970 Hordeum vulgare Barke etiol... 122 3e-027
gb|AL500268.1|AL500268 AL500268 Hordeum vulgare Barke etiol... 122 3e-027
gb|AV928909.1|AV928909 AV928909 K. Sato unpublished cDNA li... 122 3e-027
gb|AV936055.1|AV936055 AV936055 K. Sato unpublished cDNA li... 122 3e-027
gb|BU996347.1|BU996347 HM13F03r HM Hordeum vulgare subsp. v... 122 3e-027
gb|BJ547984.1|BJ547984 BJ547984 K. Sato unpublished cDNA li... 122 3e-027
gb|BJ548091.1|BJ548091 BJ548091 K. Sato unpublished cDNA li... 122 3e-027
gb|BJ548286.1|BJ548286 BJ548286 K. Sato unpublished cDNA li... 122 3e-027
gb|BJ548615.1|BJ548615 BJ548615 K. Sato unpublished cDNA li... 122 3e-027
gb|BJ548690.1|BJ548690 BJ548690 K. Sato unpublished cDNA li... 122 3e-027
gb|BJ548837.1|BJ548837 BJ548837 K. Sato unpublished cDNA li... 122 3e-027
gb|BJ548951.1|BJ548951 BJ548951 K. Sato unpublished cDNA li... 122 3e-027
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 106 4e-027
gb|CV058068.1|CV058068 BNEL34a12 Barley EST endosperm libra... 79 4e-027
gb|AV924070.1|AV924070 AV924070 K. Sato unpublished cDNA li... 100 5e-027
gb|BF267015.2|BF267015 HV_CEa0016L05f Hordeum vulgare seedl... 104 7e-027
gb|CA003236.1|CA003236 HS09N04r HS Hordeum vulgare subsp. v... 77 7e-027
gb|BG415059.1|BG415059 HVSMEk0004P20f Hordeum vulgare testa... 111 1e-026
gb|CA027668.1|CA027668 HZ59K12r HZ Hordeum vulgare subsp. v... 60 1e-026
gb|BQ766061.1|BQ766061 EBro03_SQ008_N21_R root, 3 week, wat... 82 2e-026
gb|BI955294.1|BI955294 HVSMEm0022F18f Hordeum vulgare green... 80 3e-026
gb|BF267193.3|BF267193 HV_CEa0017D12f Hordeum vulgare seedl... 100 3e-026
gb|BJ548301.1|BJ548301 BJ548301 K. Sato unpublished cDNA li... 119 3e-026
gb|BJ546043.1|BJ546043 BJ546043 K. Sato unpublished cDNA li... 94 3e-026
gb|BJ545696.1|BJ545696 BJ545696 K. Sato unpublished cDNA li... 94 3e-026
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 92 4e-026
gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. v... 55 4e-026
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 92 7e-026
gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedl... 73 7e-026
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 90 1e-025
gb|CA004877.1|CA004877 HS18P04r HS Hordeum vulgare subsp. v... 92 2e-025
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 92 2e-025
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 92 2e-025
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 92 2e-025
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 92 2e-025
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 92 2e-025
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 92 2e-025
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 92 2e-025
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 92 2e-025
gb|BM375129.2|BM375129 EBem06_SQ002_H03_R embryo, 21 DPA, n... 102 4e-025
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 92 6e-025
gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiol... 58 8e-025
gb|BF623361.2|BF623361 HVSMEa0015I24f Hordeum vulgare seedl... 78 1e-024
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 87 1e-024
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 73 1e-024
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 73 2e-024
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 73 2e-024
gb|BF622626.3|BF622626 HVSMEa0007G11f Hordeum vulgare seedl... 106 3e-024
gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hyd... 66 3e-024
gb|BQ469646.1|BQ469646 HZ01H04r HZ Hordeum vulgare subsp. v... 57 5e-024
gb|AL500360.1|AL500360 AL500360 Hordeum vulgare Barke etiol... 102 7e-024
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 88 7e-024
gb|BF260718.2|BF260718 HVSMEf0022M04f Hordeum vulgare seedl... 55 9e-024
gb|BJ547544.1|BJ547544 BJ547544 K. Sato unpublished cDNA li... 72 1e-023
gb|BF258410.2|BF258410 HVSMEf0015K10f Hordeum vulgare seedl... 109 2e-023
gb|BJ548300.1|BJ548300 BJ548300 K. Sato unpublished cDNA li... 109 2e-023
gb|BJ546861.1|BJ546861 BJ546861 K. Sato unpublished cDNA li... 70 3e-023
gb|BF261927.2|BF261927 HV_CEa0002J15f Hordeum vulgare seedl... 91 3e-023
gb|BQ294525.1|BQ294525 LP10262 Lemma/palea-enriched cDNA li... 73 3e-023
gb|BF254945.2|BF254945 HVSMEf0005H21f Hordeum vulgare seedl... 60 5e-023
gb|AV928913.1|AV928913 AV928913 K. Sato unpublished cDNA li... 95 5e-023
gb|AV935261.1|AV935261 AV935261 K. Sato unpublished cDNA li... 95 5e-023
gb|BJ547968.1|BJ547968 BJ547968 K. Sato unpublished cDNA li... 95 5e-023
gb|AV927963.1|AV927963 AV927963 K. Sato unpublished cDNA li... 95 5e-023
gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike... 66 9e-023
gb|BF260845.2|BF260845 HVSMEf0023B13f Hordeum vulgare seedl... 68 1e-022
gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike... 65 1e-022
gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedl... 65 1e-022
gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedl... 65 1e-022
gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedl... 65 1e-022
gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedl... 65 1e-022
gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedl... 65 1e-022
gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vu... 65 1e-022
gb|AV926829.1|AV926829 AV926829 K. Sato unpublished cDNA li... 67 2e-022
gb|AV834582.1|AV834582 AV834582 K. Sato unpublished cDNA li... 64 3e-022
gb|BI950563.1|BI950563 HVSMEl0021F15f Hordeum vulgare spike... 67 3e-022
gb|BE216829.1|BE216829 HV_CEb0011L16f Hordeum vulgare seedl... 63 4e-022
gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedl... 65 4e-022
gb|CA018052.1|CA018052 HV07E12r HV Hordeum vulgare subsp. v... 87 4e-022
gb|BF253911.2|BF253911 HVSMEf0002H13f Hordeum vulgare seedl... 97 6e-022
gb|BE214714.2|BE214714 HV_CEb0004E24f Hordeum vulgare seedl... 64 7e-022
gb|BF622296.2|BF622296 HVSMEa0002K01f Hordeum vulgare seedl... 54 1e-021
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 79 1e-021
gb|BF253897.2|BF253897 HVSMEf0002G20f Hordeum vulgare seedl... 62 1e-021
gb|BJ547767.1|BJ547767 BJ547767 K. Sato unpublished cDNA li... 64 1e-021
gb|CA003018.1|CA003018 HS09C19r HS Hordeum vulgare subsp. v... 75 3e-021
gb|BF623678.1|BF623678 HVSMEa0003K14f Hordeum vulgare seedl... 102 4e-021
gb|AJ435303.1|AJ435303 AJ435303 S00002 Hordeum vulgare subs... 102 4e-021
gb|BF625356.2|BF625356 HVSMEa0008J19f Hordeum vulgare seedl... 59 4e-021
gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedl... 57 6e-021
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 92 1e-020
>gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K08T 5', mRNA sequence
Length = 700
Score = 146 bits (314), Expect(3) = 4e-072
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 191 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 370
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 371 VAPWVQATR 397
Score = 109 bits (232), Expect(3) = 8e-045
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -2
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 375 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 196
Query: 183 G 181
G
Sbjct: 195 G 193
Score = 98.7 bits (209), Expect(3) = 4e-072
Identities = 37/75 (49%), Positives = 60/75 (80%)
Frame = +2 / +2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S+G+ +FGG++VG +DV+LG+L++W++A E + G ++FD +TP L+A+++RF L A
Sbjct: 476 ECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRFSELDA 655
Query: 644 AKAVLPDVDGLVEYA 688
AKA LP+VD +VE+A
Sbjct: 656 AKAALPEVDRVVEFA 700
Score = 66.1 bits (138), Expect(3) = 4e-072
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +2
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 50 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 148
Score = 63.4 bits (132), Expect(3) = 8e-045
Identities = 34/71 (47%), Positives = 40/71 (56%)
Frame = -2 / -2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST STSG+ ALAA S+ S +A GVL SK L+P S A + PS TS PT
Sbjct: 693 STTLSTSGNAALAASSSLKRSIHAAKSGVLTGSKILVPDITSVAFNQESKLPSETSTSPT 514
Query: 501 LSPPKKGLPSE 469
+SPPK P E
Sbjct: 513 VSPPK*PSPLE 481
Score = 46.9 bits (96), Expect(3) = 8e-045
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -1
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 184 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 41
>gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011F24f, mRNA sequence
Length = 808
Score = 146 bits (314), Expect(3) = 1e-071
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 209 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 388
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 389 VAPWVQATR 415
Score = 109 bits (232), Expect(3) = 1e-044
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -2
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 393 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 214
Query: 183 G 181
G
Sbjct: 213 G 211
Score = 96.8 bits (205), Expect(3) = 1e-071
Identities = 37/78 (47%), Positives = 61/78 (78%)
Frame = +2 / +2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S+G+ +FGG++VG +DV+LG+L++W++A E + G ++FD +TP L+A+++R L A
Sbjct: 494 ECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRXSELDA 673
Query: 644 AKAVLPDVDGLVEYAKQR 697
AKA LP+VD +VE+A +R
Sbjct: 674 AKAALPEVDRVVEFAIKR 727
Score = 66.1 bits (138), Expect(3) = 1e-071
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +2
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 68 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 166
Score = 62.9 bits (131), Expect(3) = 1e-044
Identities = 34/71 (47%), Positives = 40/71 (56%)
Frame = -2 / -2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST STSG+ ALAA S+ S +A GVL SK L+P S A + PS TS PT
Sbjct: 711 STTLSTSGNAALAASSSLXRSIHAAKSGVLTGSKILVPDITSVAFNQESKLPSETSTSPT 532
Query: 501 LSPPKKGLPSE 469
+SPPK P E
Sbjct: 531 VSPPK*PSPLE 499
Score = 46.9 bits (96), Expect(3) = 1e-044
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -1
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 202 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 59
>gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 5', mRNA sequence
Length = 676
Score = 144 bits (310), Expect(3) = 2e-071
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NP KKVPVL+HNGKPVC+SQ+IVQYIDEAF+G G SLLPADP++RAVARFW AY+DDKL
Sbjct: 226 NPAQKKVPVLIHNGKPVCDSQVIVQYIDEAFSGNGTSLLPADPYERAVARFWAAYVDDKL 405
Query: 359 LAFWLQSAR 385
LA WLQ+AR
Sbjct: 406 LASWLQAAR 432
Score = 120 bits (257), Expect(3) = 5e-054
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = -2 / -3
Query: 375 CSQKARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGT 196
CSQ ARSLSS *A QKRATAR GSAGRRD P+P KASSMYCTM C+S TGLPLW STGT
Sbjct: 422 CSQDARSLSST*AAQKRATARS*GSAGRRDVPLPLKASSMYCTMTCESQTGLPLWMSTGT 243
Query: 195 FLCTG 181
F C G
Sbjct: 242 FFCAG 228
Score = 110 bits (235), Expect(3) = 9e-038
Identities = 51/80 (63%), Positives = 60/80 (75%)
Frame = -1 / -2
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGH 197
LQP ELVV+VG PEAS GALV VG E+ A EGL+DVLHDDLR+A LAV++EHGH
Sbjct: 423 LQPRRQELVVDVGGPEASDGALVGVGGEERCPVAAEGLVDVLHDDLRVADGLAVMDEHGH 244
Query: 196 LLVHRVGLEEQLALAAGEVL 137
LL+ RVGLEE+ AL +L
Sbjct: 243 LLLRRVGLEEEFALVGEVLL 184
Score = 101 bits (216), Expect(3) = 7e-026
Identities = 48/75 (64%), Positives = 55/75 (73%)
Frame = +1 / +3
Query: 169 PRVQPGAQEGARAPPQRQACVRVADHRAVHR*GLRRHWPVPSPCRPAPARRGSLLGCLH* 348
PRVQPGA+EGARA P RQA +R+A HRAVHR GL+R + P RP ARR SLLG L
Sbjct: 216 PRVQPGAEEGARAHP*RQARLRLAGHRAVHRRGLQRQRDISPPRRPLRARRRSLLGRLRR 395
Query: 349 RQAPSLLAAISKGQD 393
RQAP +LAA +GQD
Sbjct: 396 RQAPGVLAAGREGQD 440
Score = 100 bits (212), Expect(3) = 2e-071
Identities = 40/57 (70%), Positives = 44/57 (77%)
Frame = +2 / +1
Query: 458 FTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERF 628
F S GKPFFGGD VGYLDVTLG LV WVHA LYGMRLFD ++P L+A+VERF
Sbjct: 505 FKACSNGKPFFGGDRVGYLDVTLGGLVVWVHAGAALYGMRLFDDAKSPLLAAWVERF 675
Score = 79.9 bits (168), Expect(3) = 5e-054
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = -2 / -3
Query: 621 STNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
ST A RG+L +S S +PYS + ACT T PSVTSRYPTLSPPKKG P E
Sbjct: 668 STQAARRGLLASSNSRMPYSAAPACTQTTRPPSVTSRYPTLSPPKKGFPLE 516
Score = 64.3 bits (134), Expect(3) = 2e-071
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2 / +1
Query: 32 GGDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G DDE KLLG +ASPFV+R KLALSFKGLS+EDV
Sbjct: 82 GRDDEPKLLGTFASPFVMRAKLALSFKGLSFEDV 183
Score = 62.0 bits (129), Expect(3) = 9e-038
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1 / -2
Query: 628 EPLHERAQPRGPRGVEEPHPVQLLGGVHPRDQRSQRHVQVPDAVAAEEGL 479
E LH Q R VE+PH +Q GVHP DQ ++R+VQVP+ VAAEE L
Sbjct: 675 EALHPGRQERALGVVEQPHAIQRRAGVHPDDQTAERYVQVPNPVAAEERL 526
Score = 50.1 bits (103), Expect(3) = 5e-054
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -1 / -2
Query: 148 GEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTS 32
GEVLL VL AQALEAEREL DE A R Q L IV+S
Sbjct: 198 GEVLLDVLEAQALEAERELRSHDERAGERAQ*LRLIVSS 82
Score = 28.1 bits (55), Expect(3) = 7e-026
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 507 GTWT*RWERWSRGC 548
GTWT*R WS GC
Sbjct: 554 GTWT*RSAVWSSGC 595
Score = 25.4 bits (49), Expect(3) = 7e-026
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 49 QAAGGVGEPIRPAGEARA 102
+A G V +P+R A EARA
Sbjct: 99 EATGHVRQPVRHASEARA 152
Score = 23.1 bits (44), Expect(3) = 9e-038
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -3
Query: 99 ASFTRRTNGLAH 64
ASF R TNGLA+
Sbjct: 149 ASFARMTNGLAN 114
>gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016G15f, mRNA sequence
Length = 830
Score = 114 bits (244), Expect(3) = 5e-067
Identities = 45/61 (73%), Positives = 52/61 (85%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV +KVPVL+H+GKPV ES +I+QYIDEAFAG GPSLLP +PH RAVARFW AYID L
Sbjct: 178 NPVLQKVPVLIHDGKPVSESSVILQYIDEAFAGVGPSLLPEEPHGRAVARFWAAYIDGTL 357
Query: 359 L 361
+
Sbjct: 358 V 360
Score = 106 bits (226), Expect(3) = 5e-067
Identities = 39/75 (52%), Positives = 56/75 (74%)
Frame = +2 / +1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
+ S GKPFFGGD+ GY+DV LG L+ WVH ++K+ G++ FD TP L+A+ + F +LGA
Sbjct: 463 DCSNGKPFFGGDTAGYVDVMLGGLLPWVHTSDKMKGVKTFDPATTPLLAAWADSFXSLGA 642
Query: 644 AKAVLPDVDGLVEYA 688
+AV+PDV L+E+A
Sbjct: 643 VEAVMPDVSKLIEFA 687
Score = 95.9 bits (203), Expect(3) = 3e-051
Identities = 42/59 (71%), Positives = 45/59 (76%)
Frame = -2 / -1
Query: 357 SLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
S+ SM*A QKRATAR GS+GR +GP PAKASSMYC M DS TGLP W STGTF TG
Sbjct: 356 SVPSM*AAQKRATARPWGSSGRSEGPTPAKASSMYCRMTDDSETGLPSWMSTGTFWSTG 180
Score = 90.4 bits (191), Expect(4) = 2e-037
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = -1 / -3
Query: 358 ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGHLLVHRV 179
E V+VG PEAS GA + + RE+ A AGEGL++VL DD RL LAVV+EH HLL H V
Sbjct: 357 ERAVDVGGPEASDGAAMGLLREERGADAGEGLVNVLQDDRRLGDGLAVVDEHRHLLEHGV 178
Query: 178 GLEEQLALA 152
G EEQLALA
Sbjct: 177 GPEEQLALA 151
Score = 79.4 bits (167), Expect(3) = 3e-051
Identities = 33/66 (50%), Positives = 39/66 (59%)
Frame = -2 / -1
Query: 666 TSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPK 487
TSG TA AP+ LS +A GV+ S L P+ S CTH PS+TS YP +SPPK
Sbjct: 665 TSGMTASTAPNDXKLSAHAAKSGVVAGSNVLTPFILSLVCTHGRRPPSITSTYPAVSPPK 486
Query: 486 KGLPSE 469
KG P E
Sbjct: 485 KGFPLE 468
Score = 73.0 bits (153), Expect(3) = 5e-067
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = +2 / +1
Query: 23 MAGGGDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
MAGGG+DE+KLLG WASPFVLR+KLALS KG++YE V
Sbjct: 25 MAGGGNDEVKLLGMWASPFVLRIKLALSLKGVAYEYV 135
Score = 68.4 bits (143), Expect(4) = 2e-037
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = -1 / -3
Query: 688 GVFDEAVDVGQHRLGRSERAEPLHERAQPRGPRGVEEPHPVQLLGGVHPRDQRSQRHVQV 509
G DE + RL ++R+E + R+Q R GVE + L+ GVHPR++ ++ HV V
Sbjct: 687 GKLDELAHIRHDRLDGAQRSEAVRPRSQERSRGGVERFDALHLIAGVHPREEAAEHHVHV 508
Query: 508 PDAVAAEEGL 479
P VA EEGL
Sbjct: 507 PRRVATEEGL 478
Score = 65.7 bits (137), Expect(3) = 3e-051
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = -1 / -3
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSGH 23
E+ A EVL HVLV ALEAEREL +DE ARP QQL +V+SSGH
Sbjct: 171 EEQLALALEVLFHVLVGDALEAERELDSKDERARPHAQQLHLVVSSSGH 25
Score = 27.2 bits (53), Expect(4) = 2e-037
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -3 / -2
Query: 68 PTPPAA*VHRHLLRPLLCS 12
PT PAA R LLRPLL S
Sbjct: 70 PTCPAASPRRFLLRPLLVS 14
Score = 25.8 bits (50), Expect(4) = 2e-037
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 99 ASFTRRTNGLAH 64
AS RRTNGLAH
Sbjct: 101 ASLIRRTNGLAH 66
>gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002A20f, mRNA sequence
Length = 846
Score = 146 bits (314), Expect(3) = 1e-066
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 211 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 390
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 391 VAPWVQATR 417
Score = 109 bits (232), Expect(3) = 1e-040
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -2
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 395 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 216
Query: 183 G 181
G
Sbjct: 215 G 213
Score = 79.9 bits (168), Expect(3) = 1e-066
Identities = 30/63 (47%), Positives = 50/63 (79%)
Frame = +2 / +1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S+G+ +FGG++VG +DV+LG+L++W++A E + G ++FD +TP L+A+++RF L A
Sbjct: 496 ECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKIFDPVKTPLLAAWMDRFYQLDA 675
Query: 644 AKA 652
AKA
Sbjct: 676 AKA 684
Score = 66.1 bits (138), Expect(3) = 1e-066
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +1
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 70 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 168
Score = 49.6 bits (102), Expect(3) = 1e-040
Identities = 28/61 (45%), Positives = 32/61 (52%)
Frame = -2 / -2
Query: 651 ALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPS 472
ALAA S S +A GVL SK L+P S A + PS TS PT+SPPK P
Sbjct: 683 ALAASSW*KRSIHAAKSGVLTGSKILVPDITSVAFNQESKLPSETSTSPTVSPPK*PSPL 504
Query: 471 E 469
E
Sbjct: 503 E 501
Score = 46.9 bits (96), Expect(3) = 1e-040
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -1
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 204 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 61
>gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. vulgare cDNA clone HV01D06
5-PRIME, mRNA sequence
Length = 629
Score = 144 bits (310), Expect(3) = 1e-066
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NP KKVPVL+HNGKPVC+SQ+IVQYIDEAF+G G SLLPADP++RAVARFW AY+DDKL
Sbjct: 216 NPAQKKVPVLIHNGKPVCDSQVIVQYIDEAFSGNGTSLLPADPYERAVARFWAAYVDDKL 395
Query: 359 LAFWLQSAR 385
LA WLQ+AR
Sbjct: 396 LASWLQAAR 422
Score = 120 bits (257), Expect(3) = 2e-050
Identities = 51/65 (78%), Positives = 53/65 (81%)
Frame = -2 / -2
Query: 375 CSQKARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGT 196
CSQ ARSLSS *A QKRATAR GSAGRRD P+P KASSMYCTM C+S TGLPLW STGT
Sbjct: 412 CSQDARSLSST*AAQKRATARS*GSAGRRDVPLPLKASSMYCTMTCESQTGLPLWMSTGT 233
Query: 195 FLCTG 181
F C G
Sbjct: 232 FFCAG 218
Score = 114 bits (243), Expect(3) = 7e-038
Identities = 52/80 (65%), Positives = 61/80 (76%)
Frame = -1 / -1
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGH 197
LQP ELVV+VG PEAS GALV VG E+ R A EGL+DVLHDDLR+A LAV++EHGH
Sbjct: 413 LQPRRQELVVDVGGPEASDGALVGVGGEERRPVAAEGLVDVLHDDLRVADGLAVMDEHGH 234
Query: 196 LLVHRVGLEEQLALAAGEVL 137
LL+ RVGLEE+ AL +L
Sbjct: 233 LLLRRVGLEEEFALVGEVLL 174
Score = 102 bits (217), Expect = 4e-021
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = -3 / -3
Query: 374 AARRLGACRQCRHPRSEPRRAGAGRQGEGTGQCRRRPHRCTAR*SATRTQACRCGGARAP 195
AA+ GACR+ R PRSE RRA GR+G T +CR RP RCTAR* A+R +ACR G ARAP
Sbjct: 411 AAKTPGACRRRRRPRSERRRARRGRRGGETSRCR*RPRRCTAR*PASRRRACRYG*ARAP 232
Query: 194 SCAPGWT 174
S APGWT
Sbjct: 231 SSAPGWT 211
Score = 97.3 bits (206), Expect(3) = 2e-024
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = +1 / +2
Query: 169 PRVQPGAQEGARAPPQRQACVRVADHRAVHR*GLRRHWPVPSPCRPAPARRGSLLGCLH* 348
PRVQPGA+EGARA P RQA +R+A HRAVHR GL+R V P RP ARR SLLG L
Sbjct: 206 PRVQPGAEEGARAHP*RQARLRLAGHRAVHRRGLQRQRDVSPPRRPLRARRRSLLGRLRR 385
Query: 349 RQAPSLLAAISKG 387
RQAP +LAA +G
Sbjct: 386 RQAPGVLAAGREG 424
Score = 83.5 bits (176), Expect(3) = 1e-066
Identities = 33/43 (76%), Positives = 33/43 (76%)
Frame = +2 / +1
Query: 458 FTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFD 586
F S GKPFFGGD VGYLDVTLG LV WVHA LYGMRLFD
Sbjct: 496 FKACSNGKPFFGGDRVGYLDVTLGGLVVWVHAGAALYGMRLFD 624
Score = 67.5 bits (141), Expect(3) = 2e-050
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = -2 / -1
Query: 588 ASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
+S S +PYS + ACT T PSVTSRYPTLSPPKKG P E
Sbjct: 626 SSNSRMPYSAAPACTQTTRPPSVTSRYPTLSPPKKGFPLE 507
Score = 64.3 bits (134), Expect(3) = 1e-066
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2 / +3
Query: 32 GGDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G DDE KLLG +ASPFV+R KLALSFKGLS+EDV
Sbjct: 72 GRDDEPKLLGTFASPFVMRAKLALSFKGLSFEDV 173
Score = 58.8 bits (122), Expect(3) = 7e-038
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -1 / -3
Query: 586 VEEPHPVQLLGGVHPRDQRSQRHVQVPDAVAAEEGL 479
VE+PH +Q GVHP DQ ++RHVQVP+ VAAEE L
Sbjct: 624 VEQPHAIQRRAGVHPDDQTAERHVQVPNPVAAEERL 517
Score = 50.1 bits (103), Expect(3) = 2e-050
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 148 GEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTS 32
GEVLL VL AQALEAEREL DE A R Q L IV+S
Sbjct: 188 GEVLLDVLEAQALEAERELRSHDERAGERAQ*LRLIVSS 72
Score = 28.1 bits (55), Expect(3) = 2e-024
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 507 GTWT*RWERWSRGC 548
GTWT*R WS GC
Sbjct: 545 GTWT*RSAVWSSGC 586
Score = 25.4 bits (49), Expect(3) = 2e-024
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 49 QAAGGVGEPIRPAGEARA 102
+A G V +P+R A EARA
Sbjct: 89 EATGHVRQPVRHASEARA 142
Score = 23.1 bits (44), Expect(3) = 7e-038
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 99 ASFTRRTNGLAH 64
ASF R TNGLA+
Sbjct: 139 ASFARMTNGLAN 104
>gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002C05f, mRNA sequence
Length = 705
Score = 146 bits (314), Expect(3) = 3e-066
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 208 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 387
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 388 VAPWVQATR 414
Score = 109 bits (232), Expect(3) = 2e-040
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -2
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 392 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 213
Query: 183 G 181
G
Sbjct: 212 G 210
Score = 79.0 bits (166), Expect(3) = 3e-066
Identities = 29/63 (46%), Positives = 49/63 (77%)
Frame = +2 / +1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S+G+ +FGG++VG +DV+LG+L++W++A E + G ++FD +TP L A+++RF L A
Sbjct: 493 ECSKGEGYFGGETVGLVDVSLGSLLSWLNATEVMSGTKIFDPVKTPLLPAWMDRFSELDA 672
Query: 644 AKA 652
+KA
Sbjct: 673 SKA 681
Score = 66.1 bits (138), Expect(3) = 3e-066
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +1
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 67 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 165
Score = 48.3 bits (99), Expect(3) = 2e-040
Identities = 27/61 (44%), Positives = 32/61 (52%)
Frame = -2 / -2
Query: 651 ALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPS 472
AL A S+ S +A GVL SK L+P S A + PS TS PT+SPPK P
Sbjct: 680 ALEASSSLKRSIHAGKSGVLTGSKILVPDITSVAFNQESKLPSETSTSPTVSPPK*PSPL 501
Query: 471 E 469
E
Sbjct: 500 E 498
Score = 46.9 bits (96), Expect(3) = 2e-040
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -1
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 201 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 58
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 136 bits (291), Expect(4) = 3e-064
Identities = 50/64 (78%), Positives = 59/64 (92%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHK VPVL+H+GKP+CESQ+I+QYIDEAFAG GPSLLPADP++RAVARFW AY++DKL
Sbjct: 245 NPVHKTVPVLIHDGKPICESQVILQYIDEAFAGVGPSLLPADPYERAVARFWAAYVEDKL 424
Query: 359 LAFW 370
L W
Sbjct: 425 LPPW 436
Score = 104 bits (222), Expect(4) = 2e-048
Identities = 47/74 (63%), Positives = 57/74 (77%)
Frame = -1 / -3
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGH 197
L P +LV +VG PEA GALV +G E+GRA AGEGL+DVL DDL LA LAVV+EHG+
Sbjct: 442 LPPRREQLVFDVGGPEARDGALVGIGGEEGRADAGEGLVDVLQDDLGLADGLAVVDEHGN 263
Query: 196 LLVHRVGLEEQLAL 155
LV+RVG EE++AL
Sbjct: 262 RLVYRVGAEEEVAL 221
Score = 104 bits (221), Expect(2) = 2e-033
Identities = 46/59 (77%), Positives = 46/59 (77%)
Frame = -2 / -1
Query: 357 SLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SLSS *A QKRATAR GSAGRRDGP PAKASSMYC M DS GLP W STGT LCTG
Sbjct: 423 SLSST*AAQKRATARS*GSAGRRDGPTPAKASSMYCRMTWDSQMGLPSWMSTGTVLCTG 247
Score = 77.6 bits (163), Expect(4) = 3e-064
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +2 / +2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFV 619
+ SEGK FFGGD VGY+DV LG++V WV A EKL G R+FDA + P L+A++
Sbjct: 530 QCSEGKGFFGGDCVGYVDVLLGSIVPWVRATEKLSGDRVFDAGKAPLLAAWM 685
Score = 64.3 bits (134), Expect(4) = 2e-048
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = -2 / -1
Query: 624 LSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
L +A S G L AS +L P SFS A TH T PS TS YPT SPPK PSE
Sbjct: 690 LXIHAASSGALPASNTLSPESFSVARTHGTILPSRTSTYPTQSPPKNPFPSE 535
Score = 59.3 bits (123), Expect(2) = 2e-033
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -1 / -3
Query: 619 HERAQPRGPRGVEEPHPVQLLGGVHPRDQRSQRHVQVPDAVAAEEGLAL 473
H Q RG GVE P +LLGG HPR +++ V VPDAVAAEE L L
Sbjct: 685 HPCRQQRGLAGVEHPVTRELLGGAHPRHYTAEQDVDVPDAVAAEEPLPL 539
Score = 58.8 bits (122), Expect(4) = 3e-064
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +2 / +2
Query: 23 MAGGGDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
MA G DE+KLLG WASPFV+R +LAL KG++YE V
Sbjct: 92 MANRGGDEVKLLGMWASPFVVRAQLALRLKGVNYEYV 202
Score = 56.1 bits (116), Expect(4) = 2e-048
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = -1 / -3
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSGH 23
E+ GE+LL VLV ALEAEREL P E ARP QQL + + GH
Sbjct: 238 EEEVALVGELLLDVLVVHALEAERELCPDHERARPHAQQLHLVSSPVGH 92
Score = 30.4 bits (60), Expect(4) = 3e-064
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 626 FGALGAAKAVLPDVDGLVEYAK 691
F L A KAV DVD +VEYA+
Sbjct: 693 FXELDAXKAVFQDVDRVVEYAR 758
Score = 24.9 bits (48), Expect(4) = 2e-048
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2 / -3
Query: 684 YSTRPSTSGSTALAAPSAPN 625
YST STS TAL A S+ N
Sbjct: 751 YSTTLSTSWKTALXASSSXN 692
>gb|BF259796.2|BF259796 HVSMEf0020E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020E15f, mRNA sequence
Length = 532
Score = 142 bits (305), Expect(2) = 2e-063
Identities = 54/69 (78%), Positives = 62/69 (89%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NP KKVPVL+HNGKPVC+SQ+IVQYIDEAF+G G SLLPADP++RAVARFW Y+DDKL
Sbjct: 10 NPAQKKVPVLIHNGKPVCDSQVIVQYIDEAFSGNGTSLLPADPYKRAVARFWAVYVDDKL 189
Query: 359 LAFWLQSAR 385
LA WLQ+AR
Sbjct: 190 LASWLQAAR 216
Score = 120 bits (257), Expect(2) = 2e-063
Identities = 52/80 (65%), Positives = 58/80 (72%)
Frame = +2 / +1
Query: 458 FTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGAL 637
F S GKPFFGGD VGYLDVTLG LV WVHA LYGMRLFD ++P L+A VERF AL
Sbjct: 289 FKACSNGKPFFGGDRVGYLDVTLGGLVLWVHAGAALYGMRLFDDAKSPSLAACVERFCAL 468
Query: 638 GAAKAVLPDVDGLVEYAKQR 697
A +AVLP D +V+ AK R
Sbjct: 469 DAGQAVLPAGDRMVQLAKMR 528
Score = 119 bits (254), Expect(2) = 2e-046
Identities = 50/65 (76%), Positives = 52/65 (80%)
Frame = -2 / -3
Query: 375 CSQKARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGT 196
CSQ ARSLSS * QKRATAR GSAGRRD P+P KASSMYCTM C+S TGLPLW STGT
Sbjct: 206 CSQDARSLSST*TAQKRATARL*GSAGRRDVPLPLKASSMYCTMTCESQTGLPLWMSTGT 27
Query: 195 FLCTG 181
F C G
Sbjct: 26 FFCAG 12
Score = 103 bits (220), Expect(2) = 2e-036
Identities = 47/69 (68%), Positives = 54/69 (78%)
Frame = -1 / -2
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGH 197
LQP ELVV+V PEAS GALV VG E+ R A EGL+DVLHDDLR+A LAV++EHGH
Sbjct: 207 LQPRRQELVVDVDGPEASDGALVGVGGEERRPVAAEGLVDVLHDDLRVADGLAVMDEHGH 28
Query: 196 LLVHRVGLE 170
LL+ RVGLE
Sbjct: 27 LLLRRVGLE 1
Score = 101 bits (215), Expect = 8e-021
Identities = 44/67 (65%), Positives = 50/67 (74%)
Frame = -3 / -1
Query: 374 AARRLGACRQCRHPRSEPRRAGAGRQGEGTGQCRRRPHRCTAR*SATRTQACRCGGARAP 195
AA+ GACR+ R PRSE RRA GR+G T +CR RP RCTAR* A+R +ACR G ARAP
Sbjct: 205 AAKTPGACRRRRRPRSERRRACRGRRGGETSRCR*RPRRCTAR*PASRRRACRYG*ARAP 26
Query: 194 SCAPGWT 174
S APGWT
Sbjct: 25 SFAPGWT 5
Score = 96.8 bits (205), Expect(2) = 4e-022
Identities = 47/73 (64%), Positives = 53/73 (72%)
Frame = +1 / +3
Query: 175 VQPGAQEGARAPPQRQACVRVADHRAVHR*GLRRHWPVPSPCRPAPARRGSLLGCLH*RQ 354
VQPGA+EGARA P RQA +R+A HRAVHR GL+R V P RP ARR SLLG L RQ
Sbjct: 6 VQPGAKEGARAHP*RQARLRLAGHRAVHRRGLQRQRDVSPPRRPLQARRRSLLGRLRRRQ 185
Query: 355 APSLLAAISKGQD 393
AP +LAA +GQD
Sbjct: 186 APGVLAAGREGQD 224
Score = 87.7 bits (185), Expect(2) = 2e-046
Identities = 39/67 (58%), Positives = 44/67 (65%)
Frame = -2 / -3
Query: 669 STSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPP 490
S +G TA A SA ST A G+L +S S +PYS + ACT T PSVTSRYPTLSPP
Sbjct: 500 SPAGRTAWPASSAQKRSTQAAREGLLASSNSRMPYSAAPACTQRTRPPSVTSRYPTLSPP 321
Query: 489 KKGLPSE 469
KKG P E
Sbjct: 320 KKGFPLE 300
Score = 69.8 bits (146), Expect(2) = 2e-036
Identities = 33/70 (47%), Positives = 41/70 (58%)
Frame = -1 / -2
Query: 688 GVFDEAVDVGQHRLGRSERAEPLHERAQPRGPRGVEEPHPVQLLGGVHPRDQRSQRHVQV 509
G D +V Q L +RAE LH + VE+PH +Q GVHP DQ ++RHVQV
Sbjct: 519 G*LDHSVAGRQDSLASVQRAEALHTGRKRGALGVVEQPHAIQRRAGVHPEDQTAERHVQV 340
Query: 508 PDAVAAEEGL 479
P+ VAAEE L
Sbjct: 339 PNPVAAEERL 310
Score = 28.1 bits (55), Expect(2) = 4e-022
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +2
Query: 507 GTWT*RWERWSRGC 548
GTWT*R WS GC
Sbjct: 338 GTWT*RSAVWSSGC 379
>gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b17 5', mRNA sequence
Length = 653
Score = 120 bits (257), Expect(3) = 6e-062
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 176 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 355
Query: 359 LAFW 370
+A W
Sbjct: 356 VAPW 367
Score = 98.7 bits (209), Expect(3) = 6e-062
Identities = 39/64 (60%), Positives = 48/64 (75%)
Frame = +2 / +2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 461 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 640
Query: 644 AKAV 655
AKAV
Sbjct: 641 AKAV 652
Score = 83.5 bits (176), Expect(3) = 1e-037
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / -3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 345 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 178
Score = 73.9 bits (155), Expect(3) = 1e-037
Identities = 35/62 (56%), Positives = 38/62 (61%)
Frame = -2 / -3
Query: 654 TALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLP 475
TALA P S +A S GVLVAS+S P S S C HAT P+ TS PTLSPPK G P
Sbjct: 651 TALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PTLSPPKNGFP 472
Query: 474 SE 469
E
Sbjct: 471 LE 466
Score = 57.9 bits (120), Expect(3) = 6e-062
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2 / +2
Query: 29 GGGDDELKLLGAWASPFVLRVKLALSFKGLSYE 127
G + ELKLLG W PF LRV+LAL+FKGLSYE
Sbjct: 29 GEDEHELKLLGTWRGPFALRVRLALNFKGLSYE 127
Score = 37.7 bits (76), Expect(3) = 1e-037
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -2
Query: 148 GEVLLHVLVAQALEAERELHPQDEWARPRPQQL 50
G+VL VLVAQA E ER H Q E P PQ+L
Sbjct: 148 GKVLFLVLVAQAFEVER*PHSQRERPPPCPQEL 50
>gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009E08f, mRNA sequence
Length = 848
Score = 138 bits (297), Expect(2) = 2e-061
Identities = 56/131 (42%), Positives = 74/131 (56%)
Frame = +2 / +3
Query: 272 AGTGPSLLPADPHQRAVARFWGAYIDDKLLAFWLQSARXXXXXXXXXXXXXXXXXXXXXX 451
+G+GP+LLP DPH RAVARFW AY DD A W+++
Sbjct: 270 SGSGPALLPGDPHDRAVARFWAAYADDHFFASWIKAFAGTTDDERAAATEAAAAALQKME 449
Query: 452 XXFTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFG 631
F E S+GK FFGGD+ GY+D+ LG VAW+ A + + G+ L DA RTP L A+ ERF
Sbjct: 450 GAFGECSKGKAFFGGDAPGYVDIALGGYVAWMRAFQAVGGVDLLDAARTPLLGAWAERFA 629
Query: 632 ALGAAKAVLPD 664
A + K +P+
Sbjct: 630 APESGKGGMPE 662
Score = 117 bits (251), Expect(2) = 2e-061
Identities = 48/85 (56%), Positives = 57/85 (67%)
Frame = +2 / +3
Query: 29 GGGDDELKLLGAWASPFVLRVKLALSFKGLSYEDVXXXXXXXXXXXXXXXNPVHKKVPVL 208
GG D+ELKLLG WASPFV R ++AL KG++ + NPVH KVPVL
Sbjct: 21 GGSDNELKLLGFWASPFVHRARVALHLKGITGYEYAEEDLTSKSDLLLASNPVHAKVPVL 200
Query: 209 LHNGKPVCESQIIVQYIDEAFAGTG 283
LH GKPVCES +IVQY+DEAF G+G
Sbjct: 201 LHGGKPVCESMLIVQYLDEAFPGSG 275
Score = 97.7 bits (207), Expect(3) = 1e-042
Identities = 46/85 (54%), Positives = 57/85 (67%)
Frame = -1 / -1
Query: 283 ASAGEGLIDVLHDDLRLAHRLAVVEEHGHLLVHRVGLEEQLALAAGEVLLHVLVAQALEA 104
A AGEGL++VLHD+ LA LA VEEHG L VH VG EE++ALA +L ++ LE
Sbjct: 275 AGAGEGLVEVLHDEHGLADGLAAVEEHGDLGVHGVGGEEEVALAGEVLLGVLVAGDPLEV 96
Query: 103 ERELHPQDEWARPRPQQLEFIVTSS 29
+R+ P E ARP PQQLE +VT S
Sbjct: 95 QRDPRPVHERARPEPQQLELVVTPS 21
Score = 68.4 bits (143), Expect(3) = 1e-042
Identities = 31/55 (56%), Positives = 34/55 (61%)
Frame = -1 / -1
Query: 634 RAEPLHERAQPRGPRGVEEPHPVQLLGGVHPRDQRSQRHVQVPDAVAAEEGLALG 470
R + L Q RGP GV+E HP L HPRD +QR V VP VAAEEGLALG
Sbjct: 632 RGKALSPGPQQRGPGGVQEVHPAHRLERAHPRDVPTQRDVHVPRGVAAEEGLALG 468
Score = 64.8 bits (135), Expect(4) = 2e-028
Identities = 25/34 (73%), Positives = 25/34 (73%)
Frame = -2 / -2
Query: 282 PVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
P P KASS YCTM DS TGLP WRSTGT CTG
Sbjct: 274 PEPGKASSRYCTMSMDSQTGLPPWRSTGTLACTG 173
Score = 52.4 bits (108), Expect(4) = 2e-028
Identities = 29/65 (44%), Positives = 31/65 (47%)
Frame = -2 / -2
Query: 663 SGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKK 484
SG L A S A S GV AS+ P + A HAT PS S YP SPPKK
Sbjct: 661 SGIPPLPDSGAAKRSAQAPSNGVRAASRRSTPPTAWNARIHATYPPSAMSTYPGASPPKK 482
Query: 483 GLPSE 469
LP E
Sbjct: 481 ALPLE 467
Score = 46.0 bits (94), Expect(3) = 1e-042
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = -1 / -1
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEG 266
L P G E+VV VG PEA GA+V V E+G A AG G
Sbjct: 374 LDPRGKEVVVGVGGPEAGDGAVVGVAGEEGGAGAGAG 264
Score = 41.8 bits (85), Expect(4) = 2e-028
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = -2 / -2
Query: 366 KARSLSSM*APQKRATARWCGSAGRRDGPVP 274
+A+ SS *A QKRATAR GS GRR GP P
Sbjct: 364 EAKKWSSA*AAQKRATARSWGSPGRRAGPEP 272
Score = 22.6 bits (43), Expect(4) = 2e-028
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 169 EQLALAAGEVLLHVLVA 119
E+ AGEVLL VLVA
Sbjct: 164 EEEVALAGEVLLGVLVA 114
>gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33l15 5', mRNA sequence
Length = 642
Score = 120 bits (257), Expect(3) = 5e-060
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 176 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 355
Query: 359 LAFW 370
+A W
Sbjct: 356 VAPW 367
Score = 92.3 bits (195), Expect(3) = 5e-060
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +2 / +2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGAL 637
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 461 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGM 634
Score = 83.5 bits (176), Expect(3) = 7e-036
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / -1
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 345 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 178
Score = 68.0 bits (142), Expect(3) = 7e-036
Identities = 31/54 (57%), Positives = 34/54 (62%)
Frame = -2 / -1
Query: 630 PNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
P S +A S GVLVAS+S P S S C HAT P+ TS PTLSPPK G P E
Sbjct: 627 PKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PTLSPPKNGFPLE 466
Score = 57.9 bits (120), Expect(3) = 5e-060
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2 / +2
Query: 29 GGGDDELKLLGAWASPFVLRVKLALSFKGLSYE 127
G + ELKLLG W PF LRV+LAL+FKGLSYE
Sbjct: 29 GEDEHELKLLGTWRGPFALRVRLALNFKGLSYE 127
Score = 37.7 bits (76), Expect(3) = 7e-036
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -3
Query: 148 GEVLLHVLVAQALEAERELHPQDEWARPRPQQL 50
G+VL VLVAQA E ER H Q E P PQ+L
Sbjct: 148 GKVLFLVLVAQAFEVER*PHSQRERPPPCPQEL 50
>gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39b17 3', mRNA sequence
Length = 736
Score = 122 bits (261), Expect(3) = 2e-059
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 370 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 191
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 190 AKAVLPDIDRLVEFAKMKR 134
Score = 120 bits (257), Expect(3) = 2e-059
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / -1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 655 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 476
Query: 359 LAFW 370
+A W
Sbjct: 475 VAPW 464
Score = 83.5 bits (176), Expect(3) = 8e-037
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 486 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 653
Score = 82.2 bits (173), Expect(3) = 8e-037
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 153 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 332
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 333 LSPPKNGFPLE 365
Score = 26.7 bits (52), Expect(3) = 8e-037
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / +2
Query: 148 GEVLLHVLVAQALEAER 98
G+VL VLVAQA E ER
Sbjct: 683 GKVLFLVLVAQAFEVER 733
Score = 25.8 bits (50), Expect(3) = 2e-059
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 95 LALSFKGLSYE 127
LAL+FKGLSYE
Sbjct: 736 LALNFKGLSYE 704
>gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m21 5', mRNA sequence
Length = 640
Score = 120 bits (257), Expect(3) = 4e-059
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 178 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 357
Query: 359 LAFW 370
+A W
Sbjct: 358 VAPW 369
Score = 92.3 bits (195), Expect(3) = 4e-059
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +2 / +1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGAL 637
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 463 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGM 636
Score = 83.5 bits (176), Expect(3) = 7e-036
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / -3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 347 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 180
Score = 68.0 bits (142), Expect(3) = 7e-036
Identities = 31/54 (57%), Positives = 34/54 (62%)
Frame = -2 / -3
Query: 630 PNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
P S +A S GVLVAS+S P S S C HAT P+ TS PTLSPPK G P E
Sbjct: 629 PKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PTLSPPKNGFPLE 468
Score = 54.7 bits (113), Expect(3) = 4e-059
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +2 / +1
Query: 29 GGGDDELKLLGAWASPFVLRVKLALSFKGLSYE 127
G LKLLG W PF LRV+LAL+FKGLSYE
Sbjct: 31 GXTSTSLKLLGTWRGPFALRVRLALNFKGLSYE 129
Score = 37.7 bits (76), Expect(3) = 7e-036
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -2
Query: 148 GEVLLHVLVAQALEAERELHPQDEWARPRPQQL 50
G+VL VLVAQA E ER H Q E P PQ+L
Sbjct: 150 GKVLFLVLVAQAFEVER*PHSQRERPPPCPQEL 52
>gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM007.F01, mRNA sequence
Length = 734
Score = 120 bits (257), Expect(3) = 1e-058
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 263 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 442
Query: 359 LAFW 370
+A W
Sbjct: 443 VAPW 454
Score = 86.8 bits (183), Expect(3) = 1e-058
Identities = 34/61 (55%), Positives = 43/61 (70%)
Frame = +2 / +2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKP FGGD+VGY+DV LG +V W+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 548 ECSSGKPVFGGDNVGYIDVVLGGMVPWMQGTEALCGLELLDATKTPVLLAWMERFGGMEP 727
Query: 644 A 646
A
Sbjct: 728 A 730
Score = 83.5 bits (176), Expect(3) = 1e-035
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / -3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 432 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 265
Score = 67.0 bits (140), Expect(3) = 1e-035
Identities = 32/60 (53%), Positives = 35/60 (58%)
Frame = -2 / -3
Query: 648 LAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
LA P S +A S GVLVAS+S P S S C H T P+ TS PTLSPPK G P E
Sbjct: 732 LAGSIPPKRSIHASSTGVLVASRSSRPQSASVPCIHGTIPPNTTSM*PTLSPPKTGFPLE 553
Score = 58.8 bits (122), Expect(3) = 1e-058
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2 / +2
Query: 20 IMAGGGDDELKLLGAWASPFVLRVKLALSFKGLSYE 127
+ G + ELKLLG W PF LRV+LAL+FKGLSYE
Sbjct: 107 VAGGEDEHELKLLGTWRGPFALRVRLALNFKGLSYE 214
Score = 37.7 bits (76), Expect(3) = 1e-035
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -2
Query: 148 GEVLLHVLVAQALEAERELHPQDEWARPRPQQL 50
G+VL VLVAQA E ER H Q E P PQ+L
Sbjct: 235 GKVLFLVLVAQAFEVER*PHSQRERPPPCPQEL 137
>gb|AV918927.1|AV918927 AV918927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l18 3', mRNA sequence
Length = 584
Score = 136 bits (291), Expect(2) = 3e-058
Identities = 58/81 (71%), Positives = 63/81 (77%)
Frame = +2 / -1
Query: 458 FTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGAL 637
F S GKPFFGGD VGYLDVTLG LV WVHA LYGMRLFD ++P L+A+VERFGAL
Sbjct: 353 FKACSNGKPFFGGDRVGYLDVTLGGLVVWVHAGAALYGMRLFDDAKSPLLAAWVERFGAL 174
Query: 638 GAAKAVLPDVDGLVEYAKQRQ 700
AAKAVLP VD +VE AK RQ
Sbjct: 173 DAAKAVLPAVDRVVELAKMRQ 111
Score = 110 bits (234), Expect(2) = 3e-058
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = +2 / -1
Query: 227 VCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFWLQSAR 385
VC+SQ+IVQYIDEAF+G G SLLPADP++RAVARFW AY+DDKLLA WLQ+AR
Sbjct: 584 VCDSQVIVQYIDEAFSGNGTSLLPADPYERAVARFWAAYVDDKLLASWLQAAR 426
Score = 104 bits (221), Expect(2) = 3e-041
Identities = 46/71 (64%), Positives = 51/71 (71%)
Frame = -2 / +1
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST ST+G TALAA SAP ST A RG+L +S S +PYS + ACT T PSVTSRYPT
Sbjct: 130 STTLSTAGRTALAASSAPKRSTQAARRGLLASSNSRMPYSAAPACTQTTRPPSVTSRYPT 309
Query: 501 LSPPKKGLPSE 469
LSPPKKG P E
Sbjct: 310 LSPPKKGFPLE 342
Score = 85.4 bits (180), Expect(2) = 3e-041
Identities = 38/48 (79%), Positives = 40/48 (83%)
Frame = -2 / +1
Query: 375 CSQKARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDS 232
CSQ ARSLSS *A QKRATAR GSAGRRD P+P KASSMYCTM C+S
Sbjct: 436 CSQDARSLSST*AAQKRATARS*GSAGRRDVPLPLKASSMYCTMTCES 579
Score = 81.7 bits (172), Expect(2) = 4e-030
Identities = 40/89 (44%), Positives = 52/89 (58%)
Frame = -1 / +3
Query: 745 GAIFLAVRGCSCRVGLPLFGVFDEAVDVGQHRLGRSERAEPLHERAQPRGPRGVEEPHPV 566
G++ + RG + L G D +VD Q LG +RAE LH Q R VE+PH +
Sbjct: 66 GSLVASCRGRCRSLRLSHLG*LDHSVDGRQDSLGSVKRAEALHPGRQERALGVVEQPHAI 245
Query: 565 QLLGGVHPRDQRSQRHVQVPDAVAAEEGL 479
Q GVHP DQ ++R+VQVP+ VAAEE L
Sbjct: 246 QRRAGVHPDDQTAERYVQVPNPVAAEERL 332
Score = 70.3 bits (147), Expect(2) = 4e-030
Identities = 33/49 (67%), Positives = 37/49 (75%)
Frame = -1 / +3
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLA 230
LQP ELVV+VG PEAS GALV VG E+ A EGL+DVLHDDLR+A
Sbjct: 435 LQPRRQELVVDVGGPEASDGALVGVGGEERCPVAAEGLVDVLHDDLRVA 581
>gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13b18 3', mRNA sequence
Length = 754
Score = 122 bits (261), Expect(2) = 2e-057
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 409 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 230
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 229 AKAVLPDIDRLVEFAKMKR 173
Score = 120 bits (257), Expect(2) = 2e-057
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / -1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 694 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 515
Query: 359 LAFW 370
+A W
Sbjct: 514 VAPW 503
Score = 83.5 bits (176), Expect(2) = 3e-034
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 525 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 692
Score = 82.2 bits (173), Expect(2) = 3e-034
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 192 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 371
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 372 LSPPKNGFPLE 404
>gb|BJ548512.1|BJ548512 BJ548512 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29b04 3', mRNA sequence
Length = 662
Score = 122 bits (261), Expect(2) = 2e-057
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 369 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 190
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 189 AKAVLPDIDRLVEFAKMKR 133
Score = 120 bits (257), Expect(2) = 2e-057
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / -3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 654 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 475
Query: 359 LAFW 370
+A W
Sbjct: 474 VAPW 463
Score = 83.5 bits (176), Expect(2) = 3e-034
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / +2
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 485 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 652
Score = 82.2 bits (173), Expect(2) = 3e-034
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 152 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 331
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 332 LSPPKNGFPLE 364
>gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001C05f, mRNA sequence
Length = 595
Score = 146 bits (314), Expect(3) = 5e-057
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 211 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 390
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 391 VAPWVQATR 417
Score = 109 bits (232), Expect(3) = 9e-035
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -3
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 395 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 216
Query: 183 G 181
G
Sbjct: 215 G 213
Score = 66.1 bits (138), Expect(3) = 5e-057
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +1
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 70 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 168
Score = 47.8 bits (98), Expect(3) = 5e-057
Identities = 16/32 (50%), Positives = 28/32 (87%)
Frame = +2 / +1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAE 559
E S+G+ +FGG++VG +DV+LG+L++W++A E
Sbjct: 496 ECSKGEGYFGGETVGLVDVSLGSLLSWLNATE 591
Score = 46.9 bits (96), Expect(3) = 9e-035
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -2
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 204 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 61
Score = 29.5 bits (58), Expect(3) = 9e-035
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -2 / -3
Query: 558 SAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
S A + PS TS PT+SPPK P E
Sbjct: 590 SVAFNQESKLPSETSTSPTVSPPK*PSPLE 501
>gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007C21f, mRNA sequence
Length = 694
Score = 135 bits (289), Expect(4) = 1e-056
Identities = 52/69 (75%), Positives = 59/69 (85%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKK+PVL+HNG PVCES IIVQYID+ FA TGPSLL DP++RAVARFW AY+DDKL
Sbjct: 231 NPVHKKIPVLIHNGSPVCESMIIVQYIDDVFASTGPSLLSEDPYERAVARFWVAYVDDKL 410
Query: 359 LAFWLQSAR 385
+A W QS R
Sbjct: 411 VAPWRQSLR 437
Score = 119 bits (254), Expect(2) = 1e-027
Identities = 54/80 (67%), Positives = 63/80 (78%)
Frame = -1 / -3
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGH 197
L P G +LVVNVG PEASHGA V V +KGRA AGE ++DVLHDD LA+R AVV+EHG+
Sbjct: 428 LPPWGYQLVVNVGHPEASHGAFVGVLGQKGRAGAGEDVVDVLHDDHGLAYRGAVVDEHGY 249
Query: 196 LLVHRVGLEEQLALAAGEVL 137
LLVHRVGLEE+LAL +L
Sbjct: 248 LLVHRVGLEEELALVGQVLL 189
Score = 113 bits (241), Expect(3) = 1e-042
Identities = 50/66 (75%), Positives = 51/66 (77%)
Frame = -2 / -1
Query: 378 DCSQKARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTG 199
DC A SLSS *A QKRATAR GS+ RRDGPV AK SSMYCTMI DSHTG PLW STG
Sbjct: 430 DCLHGATSLSST*ATQKRATARS*GSSDRRDGPVLAKTSSMYCTMIMDSHTGEPLWMSTG 251
Query: 198 TFLCTG 181
FLCTG
Sbjct: 250 IFLCTG 233
Score = 100 bits (213), Expect(2) = 1e-021
Identities = 48/77 (62%), Positives = 54/77 (70%)
Frame = +1 / +2
Query: 163 AAPRVQPGAQEGARAPPQRQACVRVADHRAVHR*GLRRHWPVPSPCRPAPARRGSLLGCL 342
A P+VQPGAQE RA PQR +RV DHRAVHR LR+H PVPS P RRGSLLG L
Sbjct: 215 APPQVQPGAQEDTRAHPQRLPGMRVHDHRAVHRRRLRQHRPVPSVRGPLRTRRGSLLGGL 394
Query: 343 H*RQAPSLLAAISKGQD 393
*RQA S + A+ +GQD
Sbjct: 395 R*RQAGSPMEAVVEGQD 445
Score = 66.1 bits (138), Expect(4) = 1e-056
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2 / +3
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G D+LKLLGAW SPFV RVKLAL+ KGLSYEDV
Sbjct: 90 GGDDLKLLGAWPSPFVTRVKLALALKGLSYEDV 188
Score = 52.8 bits (109), Expect(4) = 1e-056
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +2 / +3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYG 571
E S+G FFGGD VG +DV LG LV+W+ + LYG
Sbjct: 516 ECSKGGDFFGGDGVGLVDVALGGLVSWMKVTDVLYG 623
Score = 52.8 bits (109), Expect(3) = 1e-042
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = -1 / -3
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSGHYCARLC 5
E+ G+VLLHVLVAQAL+ ERELH +E A P +QL+ I + +C
Sbjct: 224 EEELALVGQVLLHVLVAQALQGERELHSGNERAWPCAEQLQVISSGHLQLAGLIC 60
Score = 46.0 bits (94), Expect(3) = 1e-042
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1 / -3
Query: 571 PVQLLGGVHPRDQRSQRHVQVPDAVAAEEGLALG 470
PV+ +G +HP DQ SQR+V PDAV AEE +LG
Sbjct: 623 PVKHIGHLHPGDQPSQRNVNEPDAVPAEEVPSLG 522
Score = 24.4 bits (47), Expect(2) = 1e-027
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -2 / -1
Query: 99 ASFTRRTNGLAHA 61
ASFT TNGL HA
Sbjct: 154 ASFTLVTNGLGHA 116
Score = 23.1 bits (44), Expect(4) = 1e-056
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 569 GMRLFDATRTPRLSAFVERFGAL 637
G ++FD +TP L+ + ER +
Sbjct: 622 GDKIFDPVKTPLLALWEERLNPI 690
Score = 23.1 bits (44), Expect(2) = 1e-021
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 507 GTWT*RWERWSRG 545
G+ T RWE WS G
Sbjct: 559 GSLTLRWEGWSPG 597
>gb|BJ548403.1|BJ548403 BJ548403 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24f11 3', mRNA sequence
Length = 716
Score = 122 bits (261), Expect(2) = 1e-055
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 435 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 256
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 255 AKAVLPDIDRLVEFAKMKR 199
Score = 114 bits (244), Expect(2) = 1e-055
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +2 / -3
Query: 185 VHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLA 364
V+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A
Sbjct: 714 VNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVA 535
Query: 365 FW 370
W
Sbjct: 534 PW 529
Score = 82.2 bits (173), Expect(2) = 2e-033
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 218 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 397
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 398 LSPPKNGFPLE 430
Score = 80.8 bits (170), Expect(2) = 2e-033
Identities = 36/55 (65%), Positives = 36/55 (65%)
Frame = -2 / +2
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL T
Sbjct: 551 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFT 715
>gb|BJ548926.1|BJ548926 BJ548926 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal39i21 3', mRNA sequence
Length = 691
Score = 122 bits (261), Expect(2) = 1e-055
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 410 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 231
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 230 AKAVLPDIDRLVEFAKMKR 174
Score = 114 bits (244), Expect(2) = 1e-055
Identities = 43/62 (69%), Positives = 51/62 (82%)
Frame = +2 / -3
Query: 185 VHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLA 364
V+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A
Sbjct: 689 VNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVA 510
Query: 365 FW 370
W
Sbjct: 509 PW 504
Score = 82.2 bits (173), Expect(2) = 2e-033
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +1
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 193 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 372
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 373 LSPPKNGFPLE 405
Score = 80.8 bits (170), Expect(2) = 2e-033
Identities = 36/55 (65%), Positives = 36/55 (65%)
Frame = -2 / +1
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL T
Sbjct: 526 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFT 690
>gb|BJ548749.1|BJ548749 BJ548749 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal34n09 3', mRNA sequence
Length = 642
Score = 122 bits (261), Expect(2) = 5e-055
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 366 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 187
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 186 AKAVLPDIDRLVEFAKMKR 130
Score = 112 bits (240), Expect(2) = 5e-055
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +2 / -1
Query: 188 HKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAF 367
+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A
Sbjct: 642 NKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAP 463
Query: 368 W 370
W
Sbjct: 462 W 460
Score = 82.2 bits (173), Expect(2) = 5e-033
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 149 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 328
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 329 LSPPKNGFPLE 361
Score = 79.4 bits (167), Expect(2) = 5e-033
Identities = 35/53 (66%), Positives = 35/53 (66%)
Frame = -2 / +2
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFL 190
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL
Sbjct: 482 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFL 640
>gb|CA012122.1|CA012122 HT04I07r HT Hordeum vulgare subsp. vulgare cDNA clone HT04I07
5-PRIME, mRNA sequence
Length = 452
Score = 121 bits (258), Expect(2) = 7e-055
Identities = 46/57 (80%), Positives = 53/57 (92%)
Frame = +2 / +3
Query: 215 NGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFWLQSAR 385
NGKPVC+SQ+IVQYIDEAF+G G SLLPADP++RAVARFW AY+DDKLLA WLQ+AR
Sbjct: 12 NGKPVCDSQVIVQYIDEAFSGNGTSLLPADPYERAVARFWAAYVDDKLLASWLQAAR 182
Score = 113 bits (242), Expect(2) = 7e-055
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +2 / +1
Query: 458 FTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGAL 637
F S GKPFFGGD VGYLDVTLG LV WVHA LYGMRLFD ++P L+A+VERFGAL
Sbjct: 256 FKACSNGKPFFGGDRVGYLDVTLGGLVVWVHAGAALYGMRLFDDAKSPLLAAWVERFGAL 435
Query: 638 GAAKA 652
AAKA
Sbjct: 436 DAAKA 450
Score = 98.2 bits (208), Expect(2) = 2e-042
Identities = 44/57 (77%), Positives = 47/57 (82%)
Frame = -2 / -2
Query: 375 CSQKARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRS 205
CSQ ARSLSS *A QKRATAR GSAGRRD P+P KASSMYCTM C+S TGLPL R+
Sbjct: 172 CSQDARSLSST*AAQKRATARS*GSAGRRDVPLPLKASSMYCTMTCESQTGLPLPRA 2
Score = 95.0 bits (201), Expect(2) = 2e-042
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = -2 / -1
Query: 654 TALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLP 475
TALAA SAP ST A RG+L +S S +PYS + ACT T PSVTSRYPTLSPPKKG P
Sbjct: 452 TALAASSAPKRSTQAARRGLLASSNSRMPYSAAPACTQTTRPPSVTSRYPTLSPPKKGFP 273
Query: 474 SE 469
E
Sbjct: 272 LE 267
Score = 78.0 bits (164), Expect(2) = 7e-030
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -1 / -1
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAV 215
LQP ELVV+VG PEAS GALV VG E+ R A EGL+DVLHDDLR+A LAV
Sbjct: 173 LQPRRQELVVDVGGPEASDGALVGVGGEERRPVAAEGLVDVLHDDLRVADGLAV 12
Score = 73.0 bits (153), Expect(2) = 7e-030
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = -1 / -3
Query: 649 LGRSERAEPLHERAQPRGPRGVEEPHPVQLLGGVHPRDQRSQRHVQVPDAVAAEEGL 479
LG +RAE LH Q R VE+PH +Q GVHP DQ ++RHVQVP+ VAAEE L
Sbjct: 447 LGSVQRAEALHPGRQERALGVVEQPHAIQRRAGVHPDDQTAERHVQVPNPVAAEERL 277
>gb|BJ549023.1|BJ549023 BJ549023 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal38m24 3', mRNA sequence
Length = 682
Score = 122 bits (261), Expect(2) = 3e-054
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 411 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 232
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 231 AKAVLPDIDRLVEFAKMKR 175
Score = 110 bits (234), Expect(2) = 3e-054
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +2 / -2
Query: 194 KVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
KVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 681 KVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 505
Score = 82.2 bits (173), Expect(2) = 2e-032
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 194 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 373
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 374 LSPPKNGFPLE 406
Score = 77.6 bits (163), Expect(2) = 2e-032
Identities = 34/52 (65%), Positives = 34/52 (65%)
Frame = -2 / +2
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTF 193
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTF
Sbjct: 527 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTF 682
>gb|AV936388.1|AV936388 AV936388 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11c10 3', mRNA sequence
Length = 679
Score = 122 bits (261), Expect(2) = 3e-054
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 409 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 230
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 229 AKAVLPDIDRLVEFAKMKR 173
Score = 110 bits (234), Expect(2) = 3e-054
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +2 / -1
Query: 194 KVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
KVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 679 KVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 503
Score = 82.2 bits (173), Expect(2) = 1e-031
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 192 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 371
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 372 LSPPKNGFPLE 404
Score = 74.8 bits (157), Expect(2) = 1e-031
Identities = 33/51 (64%), Positives = 33/51 (64%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGT 196
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGT
Sbjct: 525 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGT 677
>gb|BJ548710.1|BJ548710 BJ548710 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33l15 3', mRNA sequence
Length = 619
Score = 122 bits (261), Expect(2) = 3e-054
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 348 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 169
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 168 AKAVLPDIDRLVEFAKMKR 112
Score = 110 bits (234), Expect(2) = 3e-054
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +2 / -2
Query: 194 KVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
KVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 618 KVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 442
Score = 82.2 bits (173), Expect(2) = 2e-032
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 131 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 310
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 311 LSPPKNGFPLE 343
Score = 77.6 bits (163), Expect(2) = 2e-032
Identities = 34/52 (65%), Positives = 34/52 (65%)
Frame = -2 / +2
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTF 193
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTF
Sbjct: 464 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTF 619
>gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM005.F01, mRNA sequence
Length = 953
Score = 120 bits (257), Expect(3) = 7e-054
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 501 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 680
Query: 359 LAFW 370
+A W
Sbjct: 681 VAPW 692
Score = 83.5 bits (176), Expect(3) = 2e-031
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / -2
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 670 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 503
Score = 70.7 bits (148), Expect(3) = 7e-054
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +2 / +3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATR 595
E S GKPFFGGD+VGY+DV +G +VAW+ E L+G+ L DA +
Sbjct: 786 ECSSGKPFFGGDNVGYIDVVVGGMVAWMQGTEALWGLELLDAPK 917
Score = 58.8 bits (122), Expect(3) = 7e-054
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2 / +3
Query: 20 IMAGGGDDELKLLGAWASPFVLRVKLALSFKGLSYE 127
+ G + ELKLLG W PF LRV+LAL+FKGLSYE
Sbjct: 345 VAGGEDEHELKLLGTWRGPFALRVRLALNFKGLSYE 452
Score = 53.3 bits (110), Expect(3) = 2e-031
Identities = 24/42 (57%), Positives = 26/42 (61%)
Frame = -2 / -2
Query: 594 LVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
L AS+S P S S C HAT P+ TS PTLSPPK G P E
Sbjct: 916 LGASRSSRPQSASVPCIHATIPPTTTSM*PTLSPPKNGFPLE 791
Score = 37.7 bits (76), Expect(3) = 2e-031
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -1
Query: 148 GEVLLHVLVAQALEAERELHPQDEWARPRPQQL 50
G+VL VLVAQA E ER H Q E P PQ+L
Sbjct: 473 GKVLFLVLVAQAFEVER*PHSQRERPPPCPQEL 375
>gb|BJ548248.1|BJ548248 BJ548248 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal20p16 3', mRNA sequence
Length = 652
Score = 120 bits (257), Expect(3) = 2e-053
Identities = 45/64 (70%), Positives = 53/64 (82%)
Frame = +2 / -1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV+KKVPVL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L
Sbjct: 652 NPVNKKVPVLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNL 473
Query: 359 LAFW 370
+A W
Sbjct: 472 VAPW 461
Score = 94.5 bits (200), Expect(3) = 2e-053
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +2 / -2
Query: 506 GYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGAAKAVLPDVDGLVEY 685
GY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG + AKAVLPD+D LVE+
Sbjct: 324 GYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDIDRLVEF 145
Query: 686 AKQRQ 700
AK ++
Sbjct: 144 AKMKR 130
Score = 83.5 bits (176), Expect(2) = 2e-027
Identities = 37/56 (66%), Positives = 37/56 (66%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW TGTFL TG
Sbjct: 483 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRTGTFLFTG 650
Score = 62.0 bits (129), Expect(2) = 2e-027
Identities = 33/68 (48%), Positives = 38/68 (55%)
Frame = -2 / +2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS P
Sbjct: 149 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PD 328
Query: 501 LSPPKKGL 478
+ K+ L
Sbjct: 329 VVSSKERL 352
Score = 33.6 bits (67), Expect(3) = 2e-053
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 464 EISEGKPFFGGDSVG 508
E S GKPFFGGD+VG
Sbjct: 367 ECSSGKPFFGGDNVG 323
>gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021J09f, mRNA sequence
Length = 569
Score = 146 bits (314), Expect(3) = 3e-053
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 200 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 379
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 380 VAPWVQATR 406
Score = 109 bits (232), Expect(2) = 2e-031
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -3
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 384 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 205
Query: 183 G 181
G
Sbjct: 204 G 202
Score = 66.1 bits (138), Expect(3) = 3e-053
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +2
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 59 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 157
Score = 46.9 bits (96), Expect(2) = 2e-031
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -2
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 193 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 50
Score = 35.0 bits (70), Expect(3) = 3e-053
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +2 / +2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWV 547
E S+G+ +FGG++ DV+LG+L++W+
Sbjct: 485 ECSKGEGYFGGENRRTCDVSLGSLLSWL 568
>gb|AV935988.1|AV935988 AV935988 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal7g18 3', mRNA sequence
Length = 671
Score = 122 bits (261), Expect(2) = 5e-052
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 409 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 230
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 229 AKAVLPDIDRLVEFAKMKR 173
Score = 102 bits (218), Expect(2) = 5e-052
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +2 / -2
Query: 203 VLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
VL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 670 VLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 503
Score = 82.2 bits (173), Expect(2) = 4e-030
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 192 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 371
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 372 LSPPKNGFPLE 404
Score = 69.8 bits (146), Expect(2) = 4e-030
Identities = 31/49 (63%), Positives = 31/49 (63%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRST 202
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW T
Sbjct: 525 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRT 671
>gb|BJ547998.1|BJ547998 BJ547998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15i04 3', mRNA sequence
Length = 648
Score = 122 bits (261), Expect(2) = 5e-052
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 386 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 207
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 206 AKAVLPDIDRLVEFAKMKR 150
Score = 102 bits (218), Expect(2) = 5e-052
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +2 / -2
Query: 203 VLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
VL+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 647 VLIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 480
Score = 82.2 bits (173), Expect(2) = 4e-030
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +1
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 169 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 348
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 349 LSPPKNGFPLE 381
Score = 69.8 bits (146), Expect(2) = 4e-030
Identities = 31/49 (63%), Positives = 31/49 (63%)
Frame = -2 / +1
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRST 202
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW T
Sbjct: 502 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLWMRT 648
>gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002G13f, mRNA sequence
Length = 698
Score = 105 bits (223), Expect(3) = 1e-051
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPV KKVPVL+H+GK + +S IVQYIDE +A GPS+LP DP+ RA +RFW AY DDKL
Sbjct: 171 NPVEKKVPVLIHDGKTILDSSAIVQYIDEVWAAMGPSILPVDPYDRAASRFWAAYADDKL 350
Query: 359 LAFWL 373
+ ++
Sbjct: 351 FSAYV 365
Score = 92.3 bits (195), Expect(3) = 2e-032
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -1 / -1
Query: 364 G*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGHLLVH 185
G +LVV VG P+A GA+V V E R G +DVLHD R+ + LAVV+EHGHLL+H
Sbjct: 356 GEQLVVRVGGPKAGGGAVVGVDGEDRRPHGGPDFVDVLHDGRRIEYGLAVVDEHGHLLLH 177
Query: 184 RVGLEEQLAL 155
RVGLEE+LAL
Sbjct: 176 RVGLEEKLAL 147
Score = 90.9 bits (192), Expect(3) = 1e-051
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = +2 / +3
Query: 458 FTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGAL 637
F + S GK FF GDSVGYLD+ +G + W+ A K++G+ +A RTP L+ + +RF
Sbjct: 450 FAKQSNGKAFFAGDSVGYLDLAVGCHLHWLKAQRKMFGVVFLEAGRTPLLTGWAKRFAET 629
Query: 638 GAAKAVLPDVDGLVEYAKQR 697
A K V+PD D +EYAK+R
Sbjct: 630 DAGKEVVPDTDVGMEYAKKR 689
Score = 52.4 bits (108), Expect(3) = 2e-032
Identities = 26/70 (37%), Positives = 34/70 (48%)
Frame = -2 / -2
Query: 684 YSTRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYP 505
YS S SG+T+L A + N + GVL AS++ P A + P+ SRYP
Sbjct: 676 YSIPTSVSGTTSLPASVSANRFAQPVKSGVLPASRNTTPNILRCALSQCKWHPTARSRYP 497
Query: 504 TLSPPKKGLP 475
T SP K P
Sbjct: 496 TESPAKNAFP 467
Score = 46.9 bits (96), Expect(3) = 1e-051
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2 / +3
Query: 26 AGGGDDELKLLGAWASPFVLRVKLALSFKGLSYE 127
A + +LKLLG SPFV+RV++AL KGLSYE
Sbjct: 21 AMAAEGDLKLLGLSVSPFVVRVRMALHMKGLSYE 122
Score = 33.1 bits (66), Expect(3) = 2e-032
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 145 EVLLHVLVAQALEAERELHPQDEWARPRPQQLE 47
EVL +LVAQAL +R + EWA + QL+
Sbjct: 140 EVLFDILVAQALHVQRHANTNYEWAH*QA*QLQ 42
>gb|BJ548529.1|BJ548529 BJ548529 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29n06 3', mRNA sequence
Length = 688
Score = 122 bits (261), Expect(2) = 2e-051
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 430 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 251
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 250 AKAVLPDIDRLVEFAKMKR 194
Score = 100 bits (214), Expect(2) = 2e-051
Identities = 37/55 (67%), Positives = 44/55 (80%)
Frame = +2 / -1
Query: 206 LLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
L+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 688 LIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 524
Score = 82.2 bits (173), Expect(2) = 1e-029
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 213 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 392
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 393 LSPPKNGFPLE 425
Score = 68.4 bits (143), Expect(2) = 1e-029
Identities = 30/46 (65%), Positives = 30/46 (65%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLW 211
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW
Sbjct: 546 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLW 683
>gb|BJ548320.1|BJ548320 BJ548320 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal27a22 3', mRNA sequence
Length = 668
Score = 122 bits (261), Expect(2) = 2e-051
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 409 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 230
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 229 AKAVLPDIDRLVEFAKMKR 173
Score = 100 bits (214), Expect(2) = 2e-051
Identities = 37/55 (67%), Positives = 44/55 (80%)
Frame = +2 / -2
Query: 206 LLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
L+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 667 LIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 503
Score = 82.2 bits (173), Expect(2) = 1e-029
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 192 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 371
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 372 LSPPKNGFPLE 404
Score = 68.4 bits (143), Expect(2) = 1e-029
Identities = 30/46 (65%), Positives = 30/46 (65%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLW 211
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW
Sbjct: 525 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLW 662
>gb|AV927871.1|AV927871 AV927871 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13b03 3', mRNA sequence
Length = 661
Score = 122 bits (261), Expect(2) = 2e-051
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 401 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 222
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 221 AKAVLPDIDRLVEFAKMKR 165
Score = 100 bits (214), Expect(2) = 2e-051
Identities = 37/55 (67%), Positives = 44/55 (80%)
Frame = +2 / -3
Query: 206 LLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
L+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 659 LIHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 495
Score = 82.2 bits (173), Expect(2) = 1e-029
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +1
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 184 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 363
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 364 LSPPKNGFPLE 396
Score = 68.4 bits (143), Expect(2) = 1e-029
Identities = 30/46 (65%), Positives = 30/46 (65%)
Frame = -2 / +1
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLW 211
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW
Sbjct: 517 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLW 654
>gb|BJ548174.1|BJ548174 BJ548174 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13m01 3', mRNA sequence
Length = 669
Score = 122 bits (261), Expect(2) = 7e-051
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 412 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 233
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 232 AKAVLPDIDRLVEFAKMKR 176
Score = 99.1 bits (210), Expect(2) = 7e-051
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +2 / -3
Query: 209 LHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 667 IHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 506
Score = 82.2 bits (173), Expect(2) = 1e-029
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 195 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 374
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 375 LSPPKNGFPLE 407
Score = 68.4 bits (143), Expect(2) = 1e-029
Identities = 30/46 (65%), Positives = 30/46 (65%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLW 211
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW
Sbjct: 528 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLW 665
>gb|BJ548536.1|BJ548536 BJ548536 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal28e02 3', mRNA sequence
Length = 666
Score = 122 bits (261), Expect(2) = 7e-051
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 409 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 230
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 229 AKAVLPDIDRLVEFAKMKR 173
Score = 99.1 bits (210), Expect(2) = 7e-051
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +2 / -3
Query: 209 LHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 664 IHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 503
Score = 82.2 bits (173), Expect(2) = 1e-029
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 192 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 371
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 372 LSPPKNGFPLE 404
Score = 68.4 bits (143), Expect(2) = 1e-029
Identities = 30/46 (65%), Positives = 30/46 (65%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLW 211
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW
Sbjct: 525 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLW 662
>gb|AV937000.1|AV937000 AV937000 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8l20 3', mRNA sequence
Length = 657
Score = 122 bits (261), Expect(2) = 7e-051
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -3
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 400 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 221
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 220 AKAVLPDIDRLVEFAKMKR 164
Score = 99.1 bits (210), Expect(2) = 7e-051
Identities = 36/54 (66%), Positives = 43/54 (79%)
Frame = +2 / -3
Query: 209 LHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
+HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 655 IHNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 494
Score = 82.2 bits (173), Expect(2) = 1e-029
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +3
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 183 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 362
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 363 LSPPKNGFPLE 395
Score = 68.4 bits (143), Expect(2) = 1e-029
Identities = 30/46 (65%), Positives = 30/46 (65%)
Frame = -2 / +3
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLW 211
SM*A Q RATARW GS G R GPVP SSMY M DS G PLW
Sbjct: 516 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPLW 653
>gb|AV929870.1|AV929870 AV929870 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16o11 3', mRNA sequence
Length = 623
Score = 122 bits (261), Expect(2) = 1e-050
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = +2 / -1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S GKPFFGGD+VGY+DV LG +VAW+ E L G+ L DAT+TP L A++ERFG +
Sbjct: 371 ECSSGKPFFGGDNVGYIDVVLGGMVAWMQGTEALCGLELLDATKTPLLLAWMERFGGMEP 192
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
AKAVLPD+D LVE+AK ++
Sbjct: 191 AKAVLPDIDRLVEFAKMKR 135
Score = 98.2 bits (208), Expect(2) = 1e-050
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = +2 / -1
Query: 212 HNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFW 370
HNG P+CES I++YIDE + GTGP LLP DP+QRAVARFW AYID L+A W
Sbjct: 623 HNGVPICESLAILEYIDEVYRGTGPCLLPGDPYQRAVARFWAAYIDQNLVAPW 465
Score = 82.2 bits (173), Expect(2) = 3e-028
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = -2 / +1
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST S SG TALA P S +A S GVLVAS+S P S S C HAT P+ TS PT
Sbjct: 154 STNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSASVPCIHATIPPNTTSM*PT 333
Query: 501 LSPPKKGLPSE 469
LSPPK G P E
Sbjct: 334 LSPPKNGFPLE 366
Score = 63.4 bits (132), Expect(2) = 3e-028
Identities = 29/45 (64%), Positives = 29/45 (64%)
Frame = -2 / +1
Query: 348 SM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPL 214
SM*A Q RATARW GS G R GPVP SSMY M DS G PL
Sbjct: 487 SM*AAQNRATARW*GSPGSRQGPVPR*TSSMYSKMASDSQIGTPL 621
>gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017E14f, mRNA sequence
Length = 887
Score = 146 bits (314), Expect(3) = 3e-050
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 206 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 385
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 386 VAPWVQATR 412
Score = 109 bits (232), Expect(2) = 2e-031
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -3
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 390 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 211
Query: 183 G 181
G
Sbjct: 210 G 208
Score = 66.1 bits (138), Expect(3) = 3e-050
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +2
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 65 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 163
Score = 46.9 bits (96), Expect(2) = 2e-031
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -2
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 199 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 56
Score = 29.9 bits (59), Expect(3) = 3e-050
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +2 / +3
Query: 524 LGALVAWVHAAEKLYGMRLFDATRTPRLSAFVE 622
LG+L++ ++A + + G ++FD +TP +A+++
Sbjct: 552 LGSLLSLLNATKVMSGTKIFDPCKTPFFAAWMD 650
>gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011B16f, mRNA sequence
Length = 848
Score = 124 bits (266), Expect(3) = 8e-050
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVH KVPVL+H GKPVCES +I+QYIDEAF G GP+LLPADPH+RAVARFW A+I+D L
Sbjct: 227 NPVHNKVPVLIHGGKPVCESLVILQYIDEAFGGAGPALLPADPHERAVARFWAAFIEDTL 406
Query: 359 L 361
+
Sbjct: 407 V 409
Score = 93.2 bits (197), Expect(3) = 8e-034
Identities = 42/59 (71%), Positives = 43/59 (72%)
Frame = -2 / -3
Query: 357 SLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
S+SSM A Q RATAR GSAGRR GP P KASSMYC M DS TGLP W STGT L TG
Sbjct: 405 SVSSMKAAQNRATARSWGSAGRRAGPAPPKASSMYCRMTSDSQTGLPPWISTGTLLWTG 229
Score = 57.9 bits (120), Expect(3) = 8e-050
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2 / +2
Query: 14 STIMAGGGDDELKLLGAWASPFVLRVKLALSFKGLSYE 127
+T G D++KLLG WASP+VLRV+LALS KG+ YE
Sbjct: 65 TTPAMAGAADDVKLLGMWASPYVLRVRLALSIKGIRYE 178
Score = 53.8 bits (111), Expect(3) = 8e-050
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +2 / +2
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAE 559
++S GKPFFGGDS GY+D+ LG L+A V A E
Sbjct: 512 DVSMGKPFFGGDSAGYVDIVLGGLLAGVRAME 607
Score = 47.8 bits (98), Expect(3) = 8e-034
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = -1 / -2
Query: 145 EVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSGHYCA 14
+VLL VLV AL+AER+ H QD ARP QQ + S +C+
Sbjct: 196 KVLLRVLVTDALDAERKAHSQDVRARPHAQQFHVVCCSGHCWCS 65
Score = 41.4 bits (84), Expect(3) = 8e-034
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = -2 / -3
Query: 558 SAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
S A T A PS S YP LSPPKKG P E
Sbjct: 606 SMARTPARRPPSTMSTYPALSPPKKGFPME 517
>gb|BG299590.1|BG299590 HVSMEa0020O20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0020O20f, mRNA sequence
Length = 666
Score = 121 bits (259), Expect(2) = 4e-049
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = +2 / +1
Query: 194 KVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKLLAFWL 373
K+PVL+HNG PVCES IIVQYID+ FA TGPSLL DP++RAVARFW AY+DDKL+A W
Sbjct: 1 KIPVLIHNGSPVCESMIIVQYIDDVFASTGPSLLSEDPYERAVARFWVAYVDDKLVAPWR 180
Query: 374 QSAR 385
QS R
Sbjct: 181 QSLR 192
Score = 99.6 bits (211), Expect(2) = 5e-036
Identities = 45/60 (75%), Positives = 46/60 (76%)
Frame = -2 / -2
Query: 378 DCSQKARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTG 199
DC A SLSS *A QKRATAR GS+ RRDGPV AK SSMYCTMI DSHTG PLW STG
Sbjct: 185 DCLHGATSLSST*ATQKRATARS*GSSERRDGPVLAKTSSMYCTMIMDSHTGEPLWMSTG 6
Score = 94.1 bits (199), Expect(2) = 4e-049
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +2 / +1
Query: 464 EISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGALGA 643
E S+G FFGGD VG +DV LG L++W+ + L G ++FDA +TP L+A+VERF A+ A
Sbjct: 271 ECSKGGDFFGGDGVGLVDVALGGLLSWMKVTDVLSGDKIFDAVKTPFLAAWVERFSAIDA 450
Query: 644 AKAVLPDVDGLVEYAKQRQ 700
KA PDV LV+ K ++
Sbjct: 451 EKAAFPDVARLVDSPKAQE 507
Score = 93.2 bits (197), Expect(2) = 1e-032
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = -1 / -1
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGH 197
L P G +LVVNVG PEASHGA V V EKGRA AGE ++DVLHDD LA+R AVV+EHG+
Sbjct: 183 LPPWGYQLVVNVGHPEASHGAFVGVLGEKGRAGAGEDVVDVLHDDHGLAYRGAVVDEHGY 4
Query: 196 L 194
L
Sbjct: 3 L 1
Score = 72.1 bits (151), Expect(2) = 5e-036
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = -1 / -1
Query: 712 CRVGLPLFGVFDEAVDVGQHRLGRSERAEPLHERAQPRGPRGVEEPHPVQLLGGVHPRDQ 533
C+ L G ++ + + RL R +RAE LH R Q R GVE+ + +G +HPR+Q
Sbjct: 519 CKASLLCLGRINQPGHIREGRLFRVDRAEALHPRGQERSLDGVEDLVTGKHIGHLHPREQ 340
Query: 532 RSQRHVQVPDAVAAEEGLALG 470
SQR+V PDAV AEE +LG
Sbjct: 339 TSQRNVDEPDAVPAEEVPSLG 277
Score = 67.5 bits (141), Expect(2) = 1e-032
Identities = 35/71 (49%), Positives = 39/71 (54%)
Frame = -2 / -2
Query: 681 STRPSTSGSTALAAPSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPT 502
ST +TSG A +A A ST+A GVL ASK L P S S H + PS TS PT
Sbjct: 488 STSLATSGKAAFSASIALKRSTHAAKNGVLTASKILSPESTSVTFIHESRPPSATSTSPT 309
Query: 501 LSPPKKGLPSE 469
SPPKK P E
Sbjct: 308 PSPPKKSPPLE 276
>gb|CA025935.1|CA025935 HZ53J07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53J07
5-PRIME, mRNA sequence
Length = 473
Score = 139 bits (299), Expect(2) = 8e-049
Identities = 57/124 (45%), Positives = 72/124 (58%)
Frame = +2 / +3
Query: 272 AGTGPSLLPADPHQRAVARFWGAYIDDKLLAFWLQSARXXXXXXXXXXXXXXXXXXXXXX 451
+G+GP+LLPADPH RAVARFW AY DD A W+++
Sbjct: 102 SGSGPALLPADPHDRAVARFWAAYADDHFFASWIKAFAGTTDEERAAATEAAAAALQKME 281
Query: 452 XXFTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFG 631
F E S+GK FFGGD+ GY+D+ LG VAW+ A + G+ L DA RTP L+A+ ERF
Sbjct: 282 GAFGECSKGKAFFGGDAPGYVDIALGGYVAWMRAFHAVAGVDLLDAARTPLLAAWAERFA 461
Query: 632 ALGA 643
AL A
Sbjct: 462 ALDA 473
Score = 74.8 bits (157), Expect(2) = 8e-049
Identities = 28/35 (80%), Positives = 31/35 (88%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTG 283
NPVH KVPVLLH GKPVCES +IVQY+DEAF G+G
Sbjct: 3 NPVHAKVPVLLHGGKPVCESMLIVQYLDEAFPGSG 107
Score = 64.8 bits (135), Expect(3) = 2e-032
Identities = 25/34 (73%), Positives = 25/34 (73%)
Frame = -2 / -2
Query: 282 PVPAKASSMYCTMICDSHTGLPLWRSTGTFLCTG 181
P P KASS YCTM DS TGLP WRSTGT CTG
Sbjct: 106 PEPGKASSRYCTMSMDSQTGLPPWRSTGTLACTG 5
Score = 64.3 bits (134), Expect(3) = 2e-032
Identities = 30/56 (53%), Positives = 34/56 (60%)
Frame = -1 / -1
Query: 637 ERAEPLHERAQPRGPRGVEEPHPVQLLGGVHPRDQRSQRHVQVPDAVAAEEGLALG 470
ER + L Q RGP GV+E H + HPRD +QR V VP VAAEEGLALG
Sbjct: 467 ERGKALSPGRQQRGPGGVQEVHAGHRVERAHPRDVPTQRDVHVPRGVAAEEGLALG 300
Score = 54.2 bits (112), Expect(3) = 2e-024
Identities = 28/58 (48%), Positives = 30/58 (51%)
Frame = -2 / -2
Query: 642 APSAPNLSTNALSRGVLVASKSLIPYSFSAACTHATSAPSVTSRYPTLSPPKKGLPSE 469
A SA S A S GV AS+ P + A HAT PS S YP SPPKK LP E
Sbjct: 472 ASSAAKRSAQAASNGVRAASRRSTPATAWNARIHATYPPSAMSTYPGASPPKKALPLE 299
Score = 51.9 bits (107), Expect(3) = 2e-024
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1 / -1
Query: 283 ASAGEGLIDVLHDDLRLAHRLAVVEEHGHLLVHRV 179
A AGEGL++VLHD+ LA LA VEEHG L VH V
Sbjct: 107 AGAGEGLVEVLHDEHGLADGLAAVEEHGDLGVHGV 3
Score = 48.7 bits (100), Expect(3) = 2e-032
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 376 LQPEG*ELVVNVGTPEASHGALVRVGREKGRASAGEG 266
L P G E+VV VG PEA GA+V VG E+G A AG G
Sbjct: 206 LDPRGKEVVVGVGGPEAGDGAVVGVGGEEGGAGAGAG 96
Score = 44.1 bits (90), Expect(3) = 2e-024
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = -2 / -2
Query: 366 KARSLSSM*APQKRATARWCGSAGRRDGPVP 274
+A+ SS *A QKRATAR GSAGRR GP P
Sbjct: 196 EAKKWSSA*AAQKRATARSWGSAGRRAGPEP 104
>gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010K15f, mRNA sequence
Length = 749
Score = 146 bits (314), Expect(3) = 2e-048
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 211 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 390
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 391 VAPWVQATR 417
Score = 109 bits (232), Expect(2) = 2e-031
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -1
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 395 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 216
Query: 183 G 181
G
Sbjct: 215 G 213
Score = 66.1 bits (138), Expect(3) = 2e-048
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +1
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 70 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 168
Score = 46.9 bits (96), Expect(2) = 2e-031
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -3
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 204 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 61
Score = 23.1 bits (44), Expect(3) = 2e-048
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2 / +1
Query: 563 LYGMRLFDATRTPRLSAFVERFGALGAAKAVLP 661
++ +L R +A+++RF L AAK LP
Sbjct: 598 VWNQKL*TLLRIRSWAAWMDRFNELDAAKGGLP 696
>gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. vulgare cDNA clone HT02K21
5-PRIME, mRNA sequence
Length = 535
Score = 146 bits (314), Expect(2) = 3e-048
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 217 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 396
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 397 VAPWVQATR 423
Score = 109 bits (232), Expect(2) = 2e-031
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -3
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 401 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 222
Query: 183 G 181
G
Sbjct: 221 G 219
Score = 66.1 bits (138), Expect(2) = 3e-048
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +1
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 76 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 174
Score = 46.9 bits (96), Expect(2) = 2e-031
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -2
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 210 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 67
>gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004K18f, mRNA sequence
Length = 487
Score = 146 bits (314), Expect(2) = 3e-048
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +2
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 206 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 385
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 386 VAPWVQATR 412
Score = 109 bits (232), Expect(2) = 2e-031
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -2
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 390 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 211
Query: 183 G 181
G
Sbjct: 210 G 208
Score = 66.1 bits (138), Expect(2) = 3e-048
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +2
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 65 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 163
Score = 46.9 bits (96), Expect(2) = 2e-031
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -1
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 199 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 56
>gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012J22f, mRNA sequence
Length = 487
Score = 146 bits (314), Expect(2) = 3e-048
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVHKKVPVL+HNGKPVCES II+QYIDEAFAG GPSLLP+DP+QRAVARFW AYIDDKL
Sbjct: 214 NPVHKKVPVLVHNGKPVCESVIILQYIDEAFAGIGPSLLPSDPYQRAVARFWAAYIDDKL 393
Query: 359 LAFWLQSAR 385
+A W+Q+ R
Sbjct: 394 VAPWVQATR 420
Score = 109 bits (232), Expect(2) = 2e-031
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -2 / -3
Query: 363 ARSLSSM*APQKRATARWCGSAGRRDGPVPAKASSMYCTMICDSHTGLPLWRSTGTFLCT 184
A SLSSM*A QKRATARW GS GRR+GP+PA ASSMY MI DSHTG PL STGTFLCT
Sbjct: 398 ATSLSSM*AAQKRATARW*GSEGRREGPMPANASSMY*RMITDSHTGFPL*TSTGTFLCT 219
Query: 183 G 181
G
Sbjct: 218 G 216
Score = 66.1 bits (138), Expect(2) = 3e-048
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +2 / +1
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYEDV 133
G ++LKLLGAWASPFV RVKLALS KGLS+EDV
Sbjct: 73 GGEDLKLLGAWASPFVTRVKLALSLKGLSFEDV 171
Score = 46.9 bits (96), Expect(2) = 2e-031
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -1 / -2
Query: 169 EQLALAAGEVLLHVLVAQALEAERELHPQDEWARPRPQQLEFIVTSSG 26
E+ +VLL +L AQALEA+R+LHP D+ A P +QL+ + G
Sbjct: 207 EEELALVAQVLLDILEAQALEAQRKLHPGDKRACPSAEQLQVFSSGHG 64
>gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. vulgare cDNA clone HT09F05
5-PRIME, mRNA sequence
Length = 615
Score = 115 bits (245), Expect(3) = 9e-048
Identities = 43/65 (66%), Positives = 51/65 (78%)
Frame = +2 / +3
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVH KVPVL+H+GK +CES IVQY+DE +A TG S+LPADP+ RA ARFW AY D KL
Sbjct: 150 NPVHMKVPVLIHDGKSICESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKL 329
Query: 359 LAFWL 373
L W+
Sbjct: 330 LPAWV 344
Score = 93.6 bits (198), Expect(2) = 1e-021
Identities = 45/72 (62%), Positives = 49/72 (68%)
Frame = -1 / -2
Query: 370 PEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGHLL 191
P EL V VG PEAS GA+V VG E G A G L+DVLHD RLA AVV+EH L
Sbjct: 341 PRRQELAVGVGGPEASGGAVVGVGGEDGGARGGPDLVDVLHDGQRLADGFAVVDEHRDLH 162
Query: 190 VHRVGLEEQLAL 155
VHRVGLEE+LAL
Sbjct: 161 VHRVGLEEELAL 126
Score = 72.5 bits (152), Expect(3) = 9e-048
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = +2 / +3
Query: 458 FTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERF 628
F + S GKPFF GDSVGYLD+ +G+ + W K++G+ + +A R P L+A+V+RF
Sbjct: 429 FGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRF 599
Score = 41.8 bits (85), Expect(3) = 9e-048
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2 / +3
Query: 35 GDDELKLLGAWASPFVLRVKLALSFKGLSYE 127
G+ LKLLG SPFV+RV++AL K + YE
Sbjct: 9 GEGGLKLLGLTVSPFVIRVRMALQMKRVGYE 101
Score = 29.9 bits (59), Expect(2) = 1e-021
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1 / -2
Query: 145 EVLLHVLVAQALEAERELHPQDEWARPRPQQLE 47
+VLLHVLVA A + + E A + QQL+
Sbjct: 119 QVLLHVLVAHAFHLQCHAYTDHERAHRQAQQLQ 21
>gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31o05 5', mRNA sequence
Length = 605
Score = 115 bits (245), Expect(3) = 2e-047
Identities = 43/65 (66%), Positives = 51/65 (78%)
Frame = +2 / +1
Query: 179 NPVHKKVPVLLHNGKPVCESQIIVQYIDEAFAGTGPSLLPADPHQRAVARFWGAYIDDKL 358
NPVH KVPVL+H+GK +CES IVQY+DE +A TG S+LPADP+ RA ARFW AY D KL
Sbjct: 124 NPVHMKVPVLIHDGKSICESLAIVQYVDEVWAATGTSILPADPYDRAAARFWAAYADSKL 303
Query: 359 LAFWL 373
L W+
Sbjct: 304 LPAWV 318
Score = 93.6 bits (198), Expect(3) = 7e-031
Identities = 45/72 (62%), Positives = 49/72 (68%)
Frame = -1 / -3
Query: 370 PEG*ELVVNVGTPEASHGALVRVGREKGRASAGEGLIDVLHDDLRLAHRLAVVEEHGHLL 191
P EL V VG PEAS GA+V VG E G A G L+DVLHD RLA AVV+EH L
Sbjct: 315 PRRQELAVGVGGPEASGGAVVGVGGEDGGARGGPDLVDVLHDGQRLADGFAVVDEHRDLH 136
Query: 190 VHRVGLEEQLAL 155
VHRVGLEE+LAL
Sbjct: 135 VHRVGLEEELAL 100
Score = 78.5 bits (165), Expect(3) = 2e-047
Identities = 31/67 (46%), Positives = 45/67 (67%)
Frame = +2 / +1
Query: 458 FTEISEGKPFFGGDSVGYLDVTLGALVAWVHAAEKLYGMRLFDATRTPRLSAFVERFGAL 637
F + S GKPFF GDSVGYLD+ +G+ + W K++G+ + +A R P L+A+V+RF
Sbjct: 403 FGKCSNGKPFFAGDSVGYLDLVVGSQLLWFEVLRKMFGVVVIEACRAPFLAAWVKRFWET 582
Query: 638 GAAKAVL 658
AKAV+
Sbjct: 583 DTAKAVV 603
Score = 51.5 bits (106), Expect(3) = 7e-031
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = -1 / -3
Query: 655 HRLGRSERAEPLHERAQPRGPRGVEEPHPVQLLGGVHPRDQRSQRHVQVPDAVAAEEGLA 476
HRL R +PLH R Q P G+ + L + P R+ ++V D +A EEGL+
Sbjct: 600 HRLRRISLPKPLHPRGQEGSPAGLNDHDAEHLPQHLEPEQLRTDDEIEVADGIAGEEGLS 421
Query: 475 LG 470
+G
Sbjct: 420 VG 415
Score = 35.0 bits (70), Expect(3) = 2e-047
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2 / +1
Query: 53 LLGAWASPFVLRVKLALSFKGLSYE 127
LLG SPFV+RV++AL K + YE
Sbjct: 1 LLGLTVSPFVIRVRMALHMKRVGYE 75
Score = 27.2 bits (53), Expect(3) = 7e-031
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1 / -3
Query: 145 EVLLHVLVAQALEAERELHPQDEWARPRPQQ 53
+VLLHVLVA A + + E A + QQ
Sbjct: 93 QVLLHVLVAHAFHMQCHAYTDHERAHRQAQQ 1
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 460,270,103
Number of Sequences: 312970
Number of extensions: 8167899
Number of successful extensions: 143247
Number of sequences better than 1.0e-020: 448
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12757432917
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)