TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748516.2.1
(1155 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedl... 344 e-116
gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedl... 227 e-100
gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm libra... 342 1e-097
gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachi... 199 7e-097
gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm librar... 339 8e-097
gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachi... 234 7e-096
gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. v... 342 2e-093
gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. v... 338 4e-092
gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library... 334 7e-091
gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgar... 176 2e-090
gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm librar... 213 3e-089
gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 ... 150 3e-088
gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. v... 180 2e-083
gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachi... 178 4e-083
gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgar... 176 2e-082
gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachi... 177 1e-081
gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachi... 173 2e-081
gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgar... 180 2e-081
gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library... 301 4e-081
gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. v... 167 8e-080
gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm libra... 295 4e-079
gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachi... 150 8e-079
gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm libra... 293 1e-078
gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, dro... 160 1e-078
gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachi... 163 1e-078
gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. v... 180 1e-078
gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike... 291 6e-078
gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots... 255 2e-077
gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachi... 155 1e-076
gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachi... 158 3e-076
gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedl... 167 1e-074
gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA li... 160 7e-074
gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, n... 205 9e-074
gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachi... 150 2e-073
gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, wat... 217 1e-072
gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedl... 180 2e-072
gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachi... 146 2e-072
gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. v... 162 3e-072
gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. v... 271 4e-072
gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DA... 150 7e-072
gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgar... 146 7e-072
gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachi... 118 1e-071
gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. v... 162 2e-071
gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, wat... 267 7e-071
gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachi... 150 4e-070
gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA,... 146 1e-069
gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DA... 150 4e-069
gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedl... 145 4e-069
gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachi... 150 7e-069
gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. v... 150 2e-068
gb|BU981183.1|BU981183 HA22N23r HA Hordeum vulgare subsp. v... 255 4e-067
gb|CV054086.1|CV054086 BNEL106e9 Barley EST endosperm libra... 243 2e-066
gb|BQ759881.1|BQ759881 EBpi05_SQ004_P16_R pistil, 8 DPA, no... 251 5e-066
gb|BI957582.1|BI957582 HVSMEn0010D14f Hordeum vulgare rachi... 146 6e-066
gb|BF259343.2|BF259343 HVSMEf0019F11f Hordeum vulgare seedl... 133 7e-066
gb|BG310251.1|BG310251 HVSMEc0016K12f Hordeum vulgare seedl... 146 1e-065
gb|BU967134.1|BU967134 HB03G05r BC Hordeum vulgare subsp. v... 249 2e-065
gb|CA031744.1|CA031744 HX11A03r HX Hordeum vulgare subsp. v... 134 8e-065
gb|CA018998.1|CA018998 HV10G08r HV Hordeum vulgare subsp. v... 246 2e-064
gb|BI959812.1|BI959812 HVSMEn0021L03f Hordeum vulgare rachi... 140 2e-064
gb|AL507275.1|AL507275 AL507275 Hordeum vulgare Barke devel... 150 8e-064
gb|BU980194.1|BU980194 HA18P06r HA Hordeum vulgare subsp. v... 133 3e-063
gb|CB882163.1|CB882163 HL01B01w HL Hordeum vulgare subsp. v... 146 9e-063
gb|BU993991.1|BU993991 HM05E17r HM Hordeum vulgare subsp. v... 150 2e-062
gb|BE060246.3|BE060246 HVSMEg0011L08f Hordeum vulgare pre-a... 157 2e-061
gb|BQ758707.1|BQ758707 EBma07_SQ002_G16_R maternal, 21 DPA,... 150 2e-061
gb|BF260026.3|BF260026 HVSMEf0020O13f Hordeum vulgare seedl... 236 2e-061
gb|CV063939.1|CV063939 BNEL94h5 Barley EST endosperm librar... 200 7e-060
gb|BF618493.2|BF618493 HVSMEc0005N13f Hordeum vulgare seedl... 146 1e-059
gb|BQ753409.1|BQ753409 EBan01_SQ004_D03_R anther, yellow st... 124 1e-058
gb|BU978694.1|BU978694 HA14A06r HA Hordeum vulgare subsp. v... 133 1e-057
gb|CV058074.1|CV058074 BNEL34a7 Barley EST endosperm librar... 149 4e-057
gb|BI950777.1|BI950777 HVSMEl0023C15f Hordeum vulgare spike... 186 7e-057
gb|BE603113.3|BE603113 HVSMEh0101P24f Hordeum vulgare 5-45 ... 150 1e-056
gb|BQ468475.1|BQ468475 HM01F21T HM Hordeum vulgare subsp. v... 126 5e-056
gb|CB883976.1|CB883976 HM06N05r HM Hordeum vulgare subsp. v... 126 1e-054
gb|AV928430.1|AV928430 AV928430 K. Sato unpublished cDNA li... 213 1e-054
gb|BU995044.1|BU995044 HM09A07r HM Hordeum vulgare subsp. v... 127 6e-053
gb|BI959328.1|BI959328 HVSMEn0019E09f Hordeum vulgare rachi... 144 9e-053
gb|BQ469285.1|BQ469285 HM03P13r HM Hordeum vulgare subsp. v... 150 3e-052
gb|BI960393.1|BI960393 HVSMEn0024H07f Hordeum vulgare rachi... 133 6e-052
gb|CV061235.1|CV061235 BNEL66d9 Barley EST endosperm librar... 199 6e-052
gb|CV055940.1|CV055940 BNEL12B5 Barley EST endosperm librar... 127 1e-051
gb|BQ469137.1|BQ469137 HM03I08r HM Hordeum vulgare subsp. v... 126 1e-051
gb|BF257093.3|BF257093 HVSMEf0011N11f Hordeum vulgare seedl... 144 3e-051
gb|BJ463021.1|BJ463021 BJ463021 K. Sato unpublished cDNA li... 173 3e-051
gb|CK124612.1|CK124612 BES1824109m10 BES1824 Hordeum vulgar... 122 3e-051
gb|BI956518.1|BI956518 HVSMEn0003O09f Hordeum vulgare rachi... 150 2e-050
gb|BE454367.2|BE454367 HVSMEh0093N18f Hordeum vulgare 5-45 ... 165 7e-050
gb|CA004554.1|CA004554 HS17P08r HS Hordeum vulgare subsp. v... 162 7e-050
gb|CW512145.1|CW512145 ToNAR_Morex_118b Morex Exon trapped ... 136 2e-048
gb|BQ764421.1|BQ764421 EBan01_SQ005_G21_R anther, yellow st... 127 3e-048
gb|BE230894.2|BE230894 HVSMEg0001I02f Hordeum vulgare pre-a... 127 1e-047
gb|CA019796.1|CA019796 HV13D05r HV Hordeum vulgare subsp. v... 133 2e-047
gb|AV917139.1|AV917139 AV917139 K. Sato unpublished cDNA li... 180 4e-047
gb|CB884030.1|CB884030 HM10H05r HM Hordeum vulgare subsp. v... 126 2e-046
gb|CB884057.1|CB884057 HM12C11r HM Hordeum vulgare subsp. v... 126 2e-046
gb|BQ459628.1|BQ459628 HA08J01r HA Hordeum vulgare subsp. v... 100 3e-046
gb|BQ459308.1|BQ459308 HA01I15r HA Hordeum vulgare subsp. v... 115 3e-046
gb|BI958795.1|BI958795 HVSMEn0016K11f Hordeum vulgare rachi... 150 1e-045
gb|CA004842.1|CA004842 HS18N14r HS Hordeum vulgare subsp. v... 162 2e-045
gb|CA019924.1|CA019924 HV13L18r HV Hordeum vulgare subsp. v... 144 2e-045
gb|CB883447.1|CB883447 HQ02E17w HQ Hordeum vulgare subsp. v... 182 4e-045
gb|BI957226.1|BI957226 HVSMEn0008D17f Hordeum vulgare rachi... 149 5e-044
gb|BG368109.2|BG368109 HVSMEi0015L12f Hordeum vulgare 20 DA... 108 3e-043
gb|BG368652.1|BG368652 HVSMEi0020B24f Hordeum vulgare 20 DA... 106 1e-042
gb|BI957249.1|BI957249 HVSMEn0008G13f Hordeum vulgare rachi... 137 4e-042
gb|BI954215.1|BI954215 HVSMEm0016K09f Hordeum vulgare green... 146 4e-042
gb|BQ470849.1|BQ470849 HX04D14r HX Hordeum vulgare subsp. v... 100 6e-042
gb|CB882255.1|CB882255 HL01F14w HL Hordeum vulgare subsp. v... 133 8e-042
gb|BQ764220.1|BQ764220 EBan01_SQ005_P04_R anther, yellow st... 127 3e-041
gb|BU980984.1|BU980984 HA22E18r HA Hordeum vulgare subsp. v... 108 1e-040
gb|BM098205.2|BM098205 EBpi03_SQ002_N14_R pistil, 4 DPA, no... 108 1e-040
gb|BI956468.1|BI956468 HVSMEn0003I18f Hordeum vulgare rachi... 133 2e-040
gb|BG368126.2|BG368126 HVSMEi0015M21f Hordeum vulgare 20 DA... 108 7e-040
gb|CK124171.1|CK124171 BES1824107e17 BES1824 Hordeum vulgar... 100 2e-039
gb|BF253787.2|BF253787 HVSMEf0002C01f Hordeum vulgare seedl... 160 3e-039
gb|AV917082.1|AV917082 AV917082 K. Sato unpublished cDNA li... 160 1e-038
gb|CB880652.1|CB880652 HM07E17w HM Hordeum vulgare subsp. v... 160 1e-038
gb|CB881234.1|CB881234 HM09C23w HM Hordeum vulgare subsp. v... 160 1e-038
gb|BQ753618.1|BQ753618 EBan01_SQ004_M07_R anther, yellow st... 124 2e-038
gb|BU983094.1|BU983094 HA28I14r HA Hordeum vulgare subsp. v... 82 6e-038
gb|BQ467895.1|BQ467895 HR01E04r HR Hordeum vulgare subsp. v... 157 1e-037
gb|BF257559.2|BF257559 HVSMEf0013D22f Hordeum vulgare seedl... 97 4e-036
gb|CB881182.1|CB881182 HM09A07w HM Hordeum vulgare subsp. v... 106 4e-036
gb|CK122095.1|CK122095 BES1824101g21 BES1824 Hordeum vulgar... 150 1e-035
gb|BG308983.2|BG308983 HVSMEc0001E03f Hordeum vulgare seedl... 145 3e-034
gb|BG369116.2|BG369116 HVSMEi0021M10f Hordeum vulgare 20 DA... 100 5e-034
gb|BU986289.1|BU986289 HF11E17r HF Hordeum vulgare subsp. v... 143 1e-033
gb|BQ753440.1|BQ753440 EBan01_SQ004_E11_R anther, yellow st... 124 1e-031
gb|BQ760850.1|BQ760850 EBro03_SQ003_K11_R root, 3 week, wat... 137 1e-031
gb|BM442635.2|BM442635 EBan01_SQ003_L19_R anther, yellow st... 86 2e-031
gb|BG300504.2|BG300504 HVSMEb0017E15f Hordeum vulgare seedl... 114 3e-031
gb|BF257516.2|BF257516 HVSMEf0013C01f Hordeum vulgare seedl... 133 2e-030
gb|BI958556.1|BI958556 HVSMEn0015J19f Hordeum vulgare rachi... 85 3e-030
gb|BJ453165.1|BJ453165 BJ453165 K. Sato unpublished cDNA li... 131 9e-030
gb|BJ460714.1|BJ460714 BJ460714 K. Sato unpublished cDNA li... 131 9e-030
gb|BQ753385.1|BQ753385 EBan01_SQ004_C01_R anther, yellow st... 124 1e-029
gb|BU984183.1|BU984183 HF03D17r HF Hordeum vulgare subsp. v... 128 4e-029
gb|BF260322.3|BF260322 HVSMEf0021L02f Hordeum vulgare seedl... 109 8e-029
gb|BM097179.2|BM097179 EBpi07_SQ002_K14_R pistil, 12 DPA, n... 126 3e-028
gb|CB881625.1|CB881625 HM10G06w HM Hordeum vulgare subsp. v... 84 4e-028
gb|BE193443.3|BE193443 HVSMEh0081A10f Hordeum vulgare 5-45 ... 68 1e-027
gb|CB884040.1|CB884040 HM11B07r HM Hordeum vulgare subsp. v... 123 2e-027
gb|BF259315.3|BF259315 HVSMEf0019E07f Hordeum vulgare seedl... 53 4e-027
gb|BG416780.1|BG416780 HVSMEk0014H23f Hordeum vulgare testa... 100 4e-026
gb|BE421427.1|BE421427 HWM009.B12 ITEC HWM Barley Leaf Libr... 117 9e-026
gb|BG368897.2|BG368897 HVSMEi0021D09f Hordeum vulgare 20 DA... 59 1e-025
gb|CB880524.1|CB880524 HM06N05w HM Hordeum vulgare subsp. v... 84 2e-025
gb|BQ661443.1|BQ661443 HM03I08u HM Hordeum vulgare subsp. v... 84 2e-025
gb|BI958420.1|BI958420 HVSMEn0014O10f Hordeum vulgare rachi... 90 6e-025
gb|BU983370.1|BU983370 HA29H20r HA Hordeum vulgare subsp. v... 55 2e-024
gb|CA017263.1|CA017263 HV14A15u HV Hordeum vulgare subsp. v... 100 2e-024
gb|AJ436682.1|AJ436682 AJ436682 S00002 Hordeum vulgare subs... 89 4e-024
gb|AJ463502.1|AJ463502 AJ463502 S00002 Hordeum vulgare subs... 89 4e-024
gb|CA019031.1|CA019031 HV10I11r HV Hordeum vulgare subsp. v... 111 1e-023
gb|CA001233.1|CA001233 HS18N14u HS Hordeum vulgare subsp. v... 110 1e-023
gb|BM442090.2|BM442090 EBan01_SQ002_C16_R anther, yellow st... 105 5e-022
gb|AJ463236.1|AJ463236 AJ463236 S00002 Hordeum vulgare subs... 62 2e-021
gb|BQ658207.1|BQ658207 HA05E07u HA Hordeum vulgare subsp. v... 62 7e-021
>gb|BF622288.3|BF622288 HVSMEa0002I16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002I16f, mRNA sequence
Length = 851
Score = 344 bits (745), Expect(2) = e-116
Identities = 129/167 (77%), Positives = 148/167 (88%)
Frame = -3 / +2
Query: 928 SGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQI 749
+GWL A+ATWYGAP GAGP DNGGACGFK N PFS+MTSCGNEP+FKDGKGCGSCYQI
Sbjct: 32 AGWLDARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQI 211
Query: 748 RCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQ 569
RC+ + HPACSGV +TVIITDMNYYPV+++HFDLSGTAFG+MA G N++LRHAGIIDMQ
Sbjct: 212 RCVSAGHPACSGVPETVIITDMNYYPVSRFHFDLSGTAFGAMAKDGRNEELRHAGIIDMQ 391
Query: 568 FRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQS 428
FRRVPC +PGLT+TF VQHGSNP YLA+L+E+EN DGDV Q D+MQS
Sbjct: 392 FRRVPCQYPGLTVTFHVQHGSNPYYLAILVEYENGDGDVDQVDMMQS 532
Score = 260 bits (563), Expect(2) = 3e-085
Identities = 117/165 (70%), Positives = 123/165 (74%)
Frame = +3 / -3
Query: 432 CMMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFR 611
C+MS +TSPS FS S AR GLEPC T V V PG HGT LNCMSM+PACRS S R
Sbjct: 528 CIMSTWSTSPSPFSYSTRMAR**GLEPCCTWNVTVSPGYWHGTLLNCMSMMPACRSSSLR 349
Query: 612 PQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKM 791
P LAM P AVPLRSKW TG**FMSVMITV TPE AGW HRIW* EPQPLPSLK
Sbjct: 348 PSLAMAPKAVPLRSKWKRDTG**FMSVMITVSGTPEHAGWPADTHRIW*QEPQPLPSLKS 169
Query: 792 GSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQP 926
GSLPQ+VM E G L LNP APPLS+GPAP+GAPYQVALA SQP
Sbjct: 168 GSLPQEVMAEKGGRLTFLNPQAPPLSSGPAPLGAPYQVALASSQP 34
Score = 193 bits (415), Expect(2) = 2e-052
Identities = 80/121 (66%), Positives = 93/121 (76%)
Frame = -2 / +1
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
+RVQ QP +L HD+L QRA LQGRQGLRL+LPDTV PPG+LRR DGDHHGHELL
Sbjct: 106 LRVQERQPATLLRHDLLRQRAALQGRQGLRLLLPDTVRVGGPPGVLRRAGDGDHHGHELL 285
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPRPARLQPHV 495
PG +PLRP+RH +R HGQ P+R+APARR HRHAVQ GAV +PG D +PR AR QP +
Sbjct: 286 PGVPLPLRPQRHRLRRHGQGRPQRRAPARRHHRHAVQKGAVPVPGADGDVPRAARFQPLL 465
Query: 494 P 492
P
Sbjct: 466 P 468
Score = 96.4 bits (204), Expect(2) = e-116
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = -3 / +2
Query: 424 SGHWEPMHESWGSIWRIDPNRPLRGPFSMRITNESGRQLVAKNVIPANYIPDVDYRSFVQ 245
+G W PM ESWGSIWR+D RP++GPFS+RITNESG+ LVA V P ++ P+ Y SF+Q
Sbjct: 572 TGEWVPMTESWGSIWRMDTRRPMQGPFSLRITNESGKTLVADQVNPGDWEPNEIYSSFIQ 751
Score = 75.8 bits (159), Expect(2) = 3e-085
Identities = 36/59 (61%), Positives = 40/59 (67%)
Frame = +3 / -3
Query: 246 WTKER*STSGM*LAGMTFLATSCLPDSLVMRMEKGPRSGRLGSILQMEPQDSCMGSQWP 422
W KE * + G G+T+ ATS LPDSLVMR EKGP GR SI QMEPQDS MG+ P
Sbjct: 750 WMKEL*ISLGSQSPGLTWSATSVLPDSLVMRSEKGPCMGRRVSIRQMEPQDSVMGTHSP 574
Score = 75.3 bits (158), Expect(3) = 1e-033
Identities = 34/56 (60%), Positives = 37/56 (66%)
Frame = +2 / -2
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+ GQV GVG VL E Q R +ARHP ELHVDD GVPEL V A GHG E AA+
Sbjct: 478 QDGQVVGVGTVLHVERHRQPRVLARHPSELHVDDAGVPELFVAAVLGHGAEGGAAE 311
Score = 55.1 bits (114), Expect(3) = 1e-033
Identities = 24/36 (66%), Positives = 25/36 (69%)
Frame = +2 / -2
Query: 317 AGLVGDAHGEGATERAVGVDPPDGAPGLVHGLPVAG 424
AGLVGDA EGA A V PPDGAPGL HG P+ G
Sbjct: 679 AGLVGDAQREGALHGAPCVHPPDGAPGLGHGHPLPG 572
Score = 51.5 bits (106), Expect(3) = 1e-033
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = +1 / -1
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTG 834
TVSGS SR+PCRP*R ARC R SW R G
Sbjct: 215 TVSGSRSRSPCRP*RAARCRRRSWRRRVAG 126
Score = 33.6 bits (67), Expect(2) = 2e-052
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -2 / +1
Query: 422 RPLGAHARVLGLHLEDRXXXXXXXXXXXXXXQRVRQAA 309
R +GAH RVLGLHL D QRVRQ A
Sbjct: 574 RGVGAHDRVLGLHLADGHTAPHAGPLLAAHHQRVRQDA 687
>gb|BF628930.2|BF628930 HVSMEb0009C23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009C23f, mRNA sequence
Length = 762
Score = 227 bits (490), Expect(2) = e-100
Identities = 89/130 (68%), Positives = 106/130 (81%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
S +CSG +TV+ITDMNYYPVA+YHFDLSGTAFG++A GLN+KLRH+GIID+QFRRV
Sbjct: 369 SGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFRRV 548
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSGHWEPMHESWGSIWR 377
PCNFPGL I F V GSN +YLAVLIE+E+ DGDV+Q D+ +NSG W M ESWGSIWR
Sbjct: 549 PCNFPGLKINFHVVEGSNAVYLAVLIEYEDMDGDVIQVDMKGANSGSWMAMRESWGSIWR 728
Query: 376 IDPNRPLRGP 347
+D N L+GP
Sbjct: 729 MDSNHRLQGP 758
Score = 164 bits (352), Expect(2) = 1e-069
Identities = 79/126 (62%), Positives = 88/126 (69%)
Frame = +3 / -3
Query: 345 KGPRSGRLGSILQMEPQDSCMGSQWPELLCMMSACTTSPSLFSCSMSTARYMGLEPCWTR 524
KGP S L SI QM+P DS + PEL MS TSPS+ S S+STARY LEP T
Sbjct: 760 KGP*SRWLESIRQMDPHDSRIAIHDPELAPFMSTWITSPSMSSYSISTARYTALEPSTTW 581
Query: 525 KVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV 704
K+++RPGKLHGT LN MSM+P RS S RP LA P AVPLRSKWY ATG**FMSV+ITV
Sbjct: 580 KLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITV 401
Query: 705 *ATPEQ 722
PEQ
Sbjct: 400 SMLPEQ 383
Score = 160 bits (344), Expect(2) = e-100
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S +SYSS WLPA+ATWYGAP GAGP DNGGACGFK NQYPFSSMTSCGN+P+FKDGKGC
Sbjct: 165 SAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKGC 344
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 345 GSCYQIRC 368
Score = 120 bits (256), Expect(2) = 1e-069
Identities = 48/69 (69%), Positives = 54/69 (78%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EPQPLPSL G LPQ+VM+E GYW L P APPLS+GPAP+GAPYQVALAGS
Sbjct: 367 HRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQAPPLSSGPAPLGAPYQVALAGSH 188
Query: 924 PLL*DNKDL 950
L*D ++
Sbjct: 187 AEL*DTAEV 161
Score = 113 bits (241), Expect(3) = 3e-041
Identities = 49/82 (59%), Positives = 56/82 (68%)
Frame = -2 / +2
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGD H HELLPG VPL PERHG+R GQ+GP+R+AP HRH VQ G
Sbjct: 368 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 547
Query: 557 AVQLPGPDHHLPRPARLQPHVP 492
AVQLP P LPR LQ VP
Sbjct: 548 AVQLPRPQDQLPRGGGLQRGVP 613
Score = 73.9 bits (155), Expect(3) = 2e-025
Identities = 34/56 (60%), Positives = 39/56 (69%)
Frame = +2 / -2
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+H QVH VGA+ E D +A EVARHPPEL VDD V EL+V+A G G E RAAQ
Sbjct: 623 QHRQVHRVGALHHVEVDLEAGEVARHPPELDVDDARVAELLVEARLGQGAEGRAAQ 456
Score = 67.0 bits (140), Expect(3) = 3e-041
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = -2 / +2
Query: 938 VLQQWLAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLM 759
VLQ +A GQ LV R +R+Q +PVP+L+HD+L Q A +QGRQGLRL+
Sbjct: 173 VLQLRVAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLL 352
Query: 758 LPDTV 744
LPDT+
Sbjct: 353 LPDTM 367
Score = 50.1 bits (103), Expect(3) = 2e-025
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = +1 / -1
Query: 748 VSGSMSRNPCRP*RWARCHRTSWTRTGTG 834
VSGS SR+PCRP* A C R SW R GTG
Sbjct: 363 VSGSRSRSPCRP*TGAGCRRRSWRRRGTG 277
Score = 29.9 bits (59), Expect(3) = 2e-025
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 365 VGVDPPDGAPGLVHGLP 415
VGV PPDG+P L H P
Sbjct: 740 VGVHPPDGSPRLAHRHP 690
Score = 27.2 bits (53), Expect(3) = 3e-041
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / +1
Query: 414 GSPCTSPGAPSGGSTPT 364
G C S G PSGG TPT
Sbjct: 691 GWRCASRGDPSGGWTPT 741
>gb|CV054003.1|CV054003 BNEL105f8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL105f8 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 702
Score = 342 bits (741), Expect(2) = 1e-097
Identities = 129/171 (75%), Positives = 149/171 (87%)
Frame = -3 / +3
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 111 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 290
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 291 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 470
Query: 571 QFRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSG 419
QF+RVPC +PGLT+TF V+ GSNP Y+A+L+E+EN DGDV Q DIM+S G
Sbjct: 471 QFKRVPCQYPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESRPG 623
Score = 236 bits (509), Expect(2) = 2e-062
Identities = 107/163 (65%), Positives = 116/163 (71%)
Frame = +3 / -3
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
+MS+C TSPS FS S A G +P T V V PG HGT LNCM ++PA RS S RP
Sbjct: 607 IMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRP 428
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMG 794
LAM P AVPLRSKW TG *FMSVMITV TPE AGW F+H IW* EPQPLPSLK G
Sbjct: 427 YLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAGWSEFKHLIW*QEPQPLPSLKSG 248
Query: 795 SLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
LPQ+VM+E G L LNPHAPPLS+GPAPVG PY VALA SQ
Sbjct: 247 WLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALASSQ 119
Score = 149 bits (319), Expect(2) = 8e-036
Identities = 64/118 (54%), Positives = 82/118 (69%)
Frame = -2 / +2
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDHH HEL
Sbjct: 188 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAQDGDHHRHELR 367
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPRPARLQP 501
PG +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV +PG D +PR ++P
Sbjct: 368 PGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPRGGGVEP 541
Score = 35.4 bits (71), Expect(2) = 1e-097
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 424 SGHWEPMHESWGSIWRI 374
+G W PM ESW SIWR+
Sbjct: 651 TGQWVPMKESWXSIWRM 701
Score = 24.0 bits (46), Expect(2) = 2e-062
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2 / -2
Query: 377 PPDGAPGLVHGLPV 418
PPD P L+HG P+
Sbjct: 698 PPDRPPRLLHGHPL 657
Score = 22.1 bits (42), Expect(2) = 8e-036
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 422 RPLGAHARVLGLHLED 375
R +GAH V+ ++LED
Sbjct: 653 RAVGAHEGVVXVYLED 700
>gb|BI959138.1|BI959138 HVSMEn0018F10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0018F10f, mRNA sequence
Length = 669
Score = 199 bits (428), Expect(3) = 7e-097
Identities = 74/109 (67%), Positives = 95/109 (87%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 264 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 443
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSGHWE 410
PC FPGL +TF V+ GSNP+Y AVL+E+E+ DGD+VQ D+M++NSG W+
Sbjct: 444 PCEFPGLKVTFHVEQGSNPVYFAVLVEYEDGDGDLVQVDLMEANSGTWD 590
Score = 159 bits (341), Expect(3) = 2e-073
Identities = 74/118 (62%), Positives = 79/118 (66%)
Frame = +3 / -3
Query: 390 PQDSCMGSQWPELLCMMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLN 569
P S PEL M S CT SPS S S STA+Y G +PC T KV +RPG HGT LN
Sbjct: 610 PTIRASASHVPELASMRSTCTKSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLN 431
Query: 570 CMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFR 743
MSM+P CRS S RP LAM PNAVPLRSKWYLATG**FMSVM TV PEQ L+ R
Sbjct: 430 WMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHR 257
Score = 150 bits (323), Expect(3) = 7e-097
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 60 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 239
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 240 GSCYQIRC 263
Score = 128 bits (274), Expect(3) = 2e-073
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 262 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 83
Score = 111 bits (237), Expect(2) = 1e-044
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 266 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 445
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P LPR A ++P V
Sbjct: 446 VRVPWSQGDLPRGAGVEPGV 505
Score = 89.0 bits (188), Expect(2) = 1e-044
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 83 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 262
Score = 73.5 bits (154), Expect(2) = 2e-025
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2 / -2
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+HG+VH V +L EG + RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 518 QHGEVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 351
Score = 62.5 bits (130), Expect(2) = 2e-025
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 261 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 169
Score = 44.6 bits (91), Expect(3) = 7e-097
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +1
Query: 409 PMHESWGSIWRIDPNRPLRGPFSM 338
PM ESWGSIWR++ L+ PFSM
Sbjct: 592 PMRESWGSIWRVESGHRLQAPFSM 663
Score = 28.6 bits (56), Expect(3) = 2e-073
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2 / -1
Query: 338 HGEGATERAVGVDPPDGAPGLVHGLP 415
HGE E G PPD +P H P
Sbjct: 663 HGERRLEAVAGFHPPD*SPRFAHRRP 586
>gb|CV063217.1|CV063217 BNEL87h3 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87h3 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 701
Score = 339 bits (734), Expect(2) = 8e-097
Identities = 128/171 (74%), Positives = 148/171 (86%)
Frame = -3 / +3
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 117 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 296
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 297 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 476
Query: 571 QFRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSG 419
QF+RVPC +P LT+TF V+ GSNP Y+A+L+E+EN DGDV Q DIM+S G
Sbjct: 477 QFKRVPCQYPXLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESRPG 629
Score = 232 bits (500), Expect = 4e-060
Identities = 106/163 (65%), Positives = 115/163 (70%)
Frame = +3 / -2
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
+MS+C TSPS FS S A G +P T V V G HGT LNCM ++PA RS S RP
Sbjct: 613 IMSSCFTSPSPFSYSTRIAM*NGFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSLRP 434
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMG 794
LAM P AVPLRSKW TG *FMSVMITV TPE AGW F+H IW* EPQPLPSLK G
Sbjct: 433 YLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAGWSEFKHLIW*QEPQPLPSLKSG 254
Query: 795 SLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
LPQ+VM+E G L LNPHAPPLS+GPAPVG PY VALA SQ
Sbjct: 253 WLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALASSQ 125
Score = 149 bits (319), Expect = 4e-035
Identities = 64/118 (54%), Positives = 82/118 (69%)
Frame = -2 / +2
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDHH HEL
Sbjct: 194 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAQDGDHHRHELR 373
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPRPARLQP 501
PG +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV +PG D +PR ++P
Sbjct: 374 PGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPRGGGVEP 547
Score = 35.9 bits (72), Expect(2) = 8e-097
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -3 / +3
Query: 424 SGHWEPMHESWGSIW 380
+G W PM ESWGSIW
Sbjct: 657 TGQWVPMKESWGSIW 701
>gb|BI956772.1|BI956772 HVSMEn0005E06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005E06f, mRNA sequence
Length = 796
Score = 234 bits (505), Expect(2) = 7e-096
Identities = 90/143 (62%), Positives = 113/143 (79%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 247 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 426
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSGHWEPMHESWGSIWR 377
PC FPGL +TF V+ GSNP+Y AVL+E+ + DGD+VQ D+M++NS W PM ESWGSI R
Sbjct: 427 PCEFPGLKVTFHVEQGSNPVYFAVLVEYXDGDGDMVQVDLMEANSCTWTPMRESWGSILR 606
Query: 376 IDPNRPLRGPFSMRITNESGRQL 308
+D R P S + NE GR+L
Sbjct: 607 LDSGHGWRPPLSFALXNEGGREL 675
Score = 168 bits (362), Expect(2) = 5e-071
Identities = 82/145 (56%), Positives = 93/145 (64%)
Frame = +3 / -3
Query: 309 SCLPDSLVMRMEKGPRSGRLGSILQMEPQDSCMGSQWPELLCMMSACTTSPSLFSCSMST 488
S LP S + +KG S +++P DS +G EL M S CT SPS S S ST
Sbjct: 674 SSLPPSXLNANDKGGLQPCPESSRKIDPHDSRIGVHVQELASMRSTCTMSPSPSSYSTST 495
Query: 489 ARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLA 668
A+Y G +PC T KV +RPG HGT LN MSM+P CRS S RP LAM PNAVPLRSKWYLA
Sbjct: 494 AKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLA 315
Query: 669 TG**FMSVMITV*ATPEQAGWLLFR 743
TG**FMSVM TV PEQ L+ R
Sbjct: 314 TG**FMSVMTTVSGLPEQDWSLVHR 240
Score = 137 bits (294), Expect(2) = 7e-096
Identities = 51/68 (75%), Positives = 55/68 (80%)
Frame = -3 / +1
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSM GN PIFKDGKGC
Sbjct: 43 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMGGGGNXPIFKDGKGC 222
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 223 GSCYQIRC 246
Score = 120 bits (256), Expect(2) = 5e-071
Identities = 48/60 (80%), Positives = 49/60 (81%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMG LP M+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 245 HRIW*QEPHPLPSLKMGXLPPPPMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 66
Score = 111 bits (237), Expect(2) = 3e-041
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -2 / +3
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 249 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 428
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P LPR A ++P V
Sbjct: 429 VRVPWSQGDLPRGAGVEPGV 488
Score = 78.0 bits (164), Expect(2) = 3e-041
Identities = 35/60 (58%), Positives = 39/60 (65%)
Frame = -2 / +3
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+H Q AHLQG QG+RL+LPDTV
Sbjct: 66 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHGGGRQXAHLQGWQGMRLLLPDTV 245
Score = 73.5 bits (154), Expect(2) = 1e-023
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2 / -2
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+HG+VH V +L EG + RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 501 QHGEVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 334
Score = 57.0 bits (118), Expect(2) = 1e-023
Identities = 21/31 (67%), Positives = 21/31 (67%)
Frame = +1 / -1
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWA C W R GTGW
Sbjct: 244 TVSGSRSRIPCHP*RWAXCRPPPWRRRGTGW 152
>gb|BU981055.1|BU981055 HA22I03r HA Hordeum vulgare subsp. vulgare cDNA clone HA22I03
5-PRIME, mRNA sequence
Length = 597
Score = 342 bits (741), Expect = 2e-093
Identities = 129/171 (75%), Positives = 149/171 (87%)
Frame = -3 / +1
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 64 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 243
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 244 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 423
Query: 571 QFRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSG 419
QF+RVPC +PGLT+TF V+ GSNP Y+A+L+E+EN DGDV Q DIM+S G
Sbjct: 424 QFKRVPCQYPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIMESRPG 576
Score = 237 bits (513), Expect = 6e-062
Identities = 108/163 (66%), Positives = 117/163 (71%)
Frame = +3 / -2
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
+MS+C TSPS FS S A GL+P T V V PG HGT LNCM ++PA RS S RP
Sbjct: 560 IMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRP 381
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMG 794
LAM P AVPLRSKW TG *FMSVMITV TPE AGW F+H IW* EPQPLPSLK G
Sbjct: 380 YLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAGWSEFKHLIW*QEPQPLPSLKSG 201
Query: 795 SLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
LPQ+VM+E G L LNPHAPPLS+GPAPVG PY VALA SQ
Sbjct: 200 WLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALASSQ 72
Score = 140 bits (300), Expect = 2e-032
Identities = 61/112 (54%), Positives = 78/112 (69%)
Frame = -2 / +3
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDH+ HEL
Sbjct: 141 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAEDGDHNRHELR 320
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPR 519
P +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV +PG D +PR
Sbjct: 321 PSLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPR 476
>gb|BQ458429.1|BQ458429 HA05E07r HA Hordeum vulgare subsp. vulgare cDNA clone HA05E07
5-PRIME, mRNA sequence
Length = 504
Score = 338 bits (732), Expect = 4e-092
Identities = 127/167 (76%), Positives = 147/167 (88%)
Frame = -3 / +2
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 2 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 181
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 182 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 361
Query: 571 QFRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQ 431
QF+RVPC +PGLT+TF V+ GSNP Y+A+L+E+EN DGDV Q DIM+
Sbjct: 362 QFKRVPCQYPGLTVTFHVEEGSNPFYMAILVEYENGDGDVKQLDIME 502
Score = 237 bits (513), Expect = 6e-062
Identities = 108/163 (66%), Positives = 117/163 (71%)
Frame = +3 / -1
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
+MS+C TSPS FS S A GL+P T V V PG HGT LNCM ++PA RS S RP
Sbjct: 498 IMSSCFTSPSPFSYSTRIAM*NGLDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRP 319
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMG 794
LAM P AVPLRSKW TG *FMSVMITV TPE AGW F+H IW* EPQPLPSLK G
Sbjct: 318 YLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAGWSEFKHLIW*QEPQPLPSLKSG 139
Query: 795 SLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
LPQ+VM+E G L LNPHAPPLS+GPAPVG PY VALA SQ
Sbjct: 138 WLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALASSQ 10
Score = 140 bits (300), Expect = 2e-032
Identities = 61/112 (54%), Positives = 78/112 (69%)
Frame = -2 / +1
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDH+ HEL
Sbjct: 79 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAEDGDHNRHELR 258
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPR 519
P +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV +PG D +PR
Sbjct: 259 PSLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPR 414
>gb|CV060611.1|CV060611 BNEL5B4 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL5B4 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 334 bits (723), Expect = 7e-091
Identities = 127/170 (74%), Positives = 147/170 (86%)
Frame = -3 / +3
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 111 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 290
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 291 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 470
Query: 571 QFRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNS 422
QF+RVPC +PGLT+TF V+ SNP Y+A+L E+EN DGDV Q DIM+S +
Sbjct: 471 QFKRVPCQYPGLTVTFHVEEXSNPFYMAILGEYENGDGDVKQLDIMESRT 620
Score = 231 bits (498), Expect = 8e-060
Identities = 106/163 (65%), Positives = 115/163 (70%)
Frame = +3 / -1
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
+MS+C TSPS FS S A G + T V V PG HGT LNCM ++PA RS S RP
Sbjct: 607 IMSSCFTSPSPFSYSPRIAM*NGFDXSST*NVTVNPGYWHGTLLNCMLIMPAWRSSSLRP 428
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMG 794
LAM P AVPLRSKW TG *FMSVMITV TPE AGW F+H IW* EPQPLPSLK G
Sbjct: 427 YLAMAPKAVPLRSKW*RETGS*FMSVMITVLGTPEHAGWSEFKHLIW*QEPQPLPSLKSG 248
Query: 795 SLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
LPQ+VM+E G L LNPHAPPLS+GPAPVG PY VALA SQ
Sbjct: 247 WLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVALASSQ 119
Score = 145 bits (311), Expect = 5e-034
Identities = 63/118 (53%), Positives = 81/118 (68%)
Frame = -2 / +2
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDHH HEL
Sbjct: 188 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAQDGDHHRHELR 367
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPRPARLQP 501
PG +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV +PG D + R ++P
Sbjct: 368 PGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVSRGGGVEP 541
>gb|CK122737.1|CK122737 BES1824105j22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010J225 5-PRIME, mRNA sequence
Length = 776
Score = 176 bits (379), Expect(3) = 2e-090
Identities = 68/102 (66%), Positives = 83/102 (81%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+ H ACSG +TV+ITDMNYYPVA YHFDLSGTAFG +A G ND+LRHAGIID+QF RV
Sbjct: 316 TKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRV 495
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQ 431
C FPGL + F V+ GSN +Y+A+L+E+EN DGDVVQ D+M+
Sbjct: 496 ACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLME 621
Score = 133 bits (285), Expect(3) = 2e-090
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = -3 / +1
Query: 913 AKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLK 737
A+ATWYGAP GAGP DNGGACGFK N+YPF +MTSCGN+P+FKDGKGCG+CY+I+C K
Sbjct: 145 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTK 321
Score = 118 bits (253), Expect(3) = 6e-055
Identities = 58/97 (59%), Positives = 62/97 (63%)
Frame = +3 / -1
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
M S CTTSPS FS S A Y L+P T PG H T +N MSM+PACRS S RP
Sbjct: 617 MRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRP 438
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQA 725
LA P AVPLRSKW ATG**FMSV+ITV PE A
Sbjct: 437 GLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHA 327
Score = 103 bits (219), Expect(3) = 2e-034
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = -2 / +3
Query: 725 GLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQL 546
G+LR DGD HGHELLPGG +PLRP+RH +R Q P+R+AP RR HRH V G V++
Sbjct: 327 GVLRAAGDGDDHGHELLPGGALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRV 506
Query: 545 PGPDHHLPRPARLQ 504
PG + +PR +Q
Sbjct: 507 PGAEGGVPRGGGVQ 548
Score = 94.5 bits (200), Expect(3) = 6e-055
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +3 / -1
Query: 732 LLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVAL 911
L F H I *H PQPLPSL G LPQ+VM NGY LNP APPLS GPAP+GAPYQVA
Sbjct: 326 LCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGAPYQVAR 147
Query: 912 A 914
A
Sbjct: 146 A 144
Score = 62.9 bits (131), Expect(3) = 2e-090
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = -3 / +3
Query: 424 SGHWEPMHESWGSIWRIDPNRPLRGPFSMRITNESGRQLVAKNV 293
+G W M ESWGSIW +D L+ P S+RI NESG++L A+NV
Sbjct: 645 AGRWTRMPESWGSIWGLDSXNRLQXPXSIRIRNESGKKLXARNV 776
Score = 53.8 bits (111), Expect(3) = 2e-034
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -2 / +3
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQ 732
+RVQ +PVPV HD+L Q A +QGRQGLR ML D V E Q
Sbjct: 204 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQ 326
Score = 40.5 bits (82), Expect(3) = 6e-055
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +2 / -1
Query: 308 QLPAGLVGDAHGEGATERAVGVDPPDGAPGLVHGLPVA 421
+L GLV DA G E GV+ PDG+P L H P A
Sbjct: 761 ELLXGLVADADGXWXLETIXGVEAPDGSPRLGHXXPPA 648
Score = 27.2 bits (53), Expect(3) = 2e-034
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1 / +1
Query: 420 ATGSPCTSPGAPSGGSTP 367
A G C S G PSG STP
Sbjct: 649 AGGXXCPSRGDPSGASTP 702
>gb|CV060955.1|CV060955 BNEL63c5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL63c5 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 634
Score = 213 bits (460), Expect(3) = 3e-089
Identities = 80/98 (81%), Positives = 87/98 (88%)
Frame = -3 / +2
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 53 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 232
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGT 638
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGT
Sbjct: 233 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGT 346
Score = 160 bits (345), Expect(2) = 3e-054
Identities = 70/95 (73%), Positives = 74/95 (77%)
Frame = +3 / -2
Query: 639 VPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMD 818
VPLRSKW TG *FMSVMITV TPE AGW F+H IW* EPQPLPSLK G LPQ+VM+
Sbjct: 345 VPLRSKW*RETGS*FMSVMITVLGTPEHAGWSEFKHLIW*QEPQPLPSLKSGWLPQEVME 166
Query: 819 ENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
E G L LNPHAPPLS+GPAPVG PY VALA SQ
Sbjct: 165 EKGGKLTFLNPHAPPLSSGPAPVGLPYHVALASSQ 61
Score = 126 bits (269), Expect(3) = 3e-089
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = -3 / +3
Query: 637 AFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDG 458
AFG MA +G ND+LRHAGII+MQF+RVPC +P LT+TF V+ GSNP Y+ +L+E+EN DG
Sbjct: 348 AFGGMAKYGRNDELRHAGIINMQFKRVPCQYPXLTVTFHVEEGSNPFYMGILVEYENGDG 527
Query: 457 DVVQADIMQSNSG 419
DV Q DIM+S G
Sbjct: 528 DVKQLDIMESRPG 566
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 42/72 (58%), Positives = 50/72 (69%)
Frame = -2 / +1
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDHH HEL
Sbjct: 130 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAQDGDHHRHELR 309
Query: 674 PGGQVPLRPERH 639
PG +PLRP+ H
Sbjct: 310 PGLPLPLRPQWH 345
Score = 72.1 bits (151), Expect(2) = 3e-054
Identities = 35/68 (51%), Positives = 40/68 (58%)
Frame = +3 / -1
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
+MS+C TSPS FS S G +P T V V G HGT LNCM ++PA RS S RP
Sbjct: 550 IMSSCFTSPSPFSYSTRMPM*NGFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSLRP 371
Query: 615 QLAMDPNA 638
LAM P A
Sbjct: 370 YLAMPPKA 347
Score = 56.5 bits (117), Expect(2) = 3e-030
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = -2 / +2
Query: 635 VRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPRPARLQP 501
+R HGQ+ +R+AP RR ++HAVQ GAV +PG D +PR ++P
Sbjct: 350 LRRHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPRGGGVEP 484
Score = 29.0 bits (57), Expect(3) = 3e-089
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +3
Query: 424 SGHWEPMHESWGS 386
+G W PM ESWGS
Sbjct: 594 TGQWVPMKESWGS 632
>gb|BE196421.3|BE196421 HVSMEh0092D24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092D24f, mRNA sequence
Length = 901
Score = 150 bits (323), Expect(3) = 3e-088
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +1
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 82 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 261
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 262 GSCYQIRC 285
Score = 128 bits (274), Expect(3) = 4e-066
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 284 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 105
Score = 127 bits (272), Expect(3) = 3e-088
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 286 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 465
Query: 556 PCNFPGL 536
PC FP L
Sbjct: 466 PCEFPCL 486
Score = 107 bits (229), Expect(3) = 4e-066
Identities = 49/70 (70%), Positives = 52/70 (74%)
Frame = +3 / -3
Query: 534 VRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*AT 713
+R G HGT LN MSM+P CRS S RP LAM PNAVPLRSKWYLATG**FMSVM TV
Sbjct: 488 LRQGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 309
Query: 714 PEQAGWLLFR 743
PEQ L+ R
Sbjct: 308 PEQDWSLVHR 279
Score = 101 bits (215), Expect(3) = 7e-043
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +3
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 288 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 467
Query: 554 VQLP 543
V++P
Sbjct: 468 VRVP 479
Score = 89.0 bits (188), Expect(3) = 7e-043
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +3
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 105 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 284
Score = 87.2 bits (184), Expect(3) = 3e-088
Identities = 35/64 (54%), Positives = 43/64 (67%)
Frame = -3 / +3
Query: 532 ITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSGHWEPMHESWGSIWRIDPNRPLR 353
+TF V+ SNP+Y AVL E+E+ DGDVVQ +N G W PM ESWGSIW +D L+
Sbjct: 489 VTFHVEQXSNPVYFAVLGEYEDGDGDVVQGGPNGANFGTWTPMRESWGSIWGLDFGHRLQ 668
Query: 352 GPFS 341
PFS
Sbjct: 669 APFS 680
Score = 62.5 bits (130), Expect(4) = 2e-023
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 283 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 191
Score = 55.1 bits (114), Expect(3) = 4e-066
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +3 / -1
Query: 342 EKGPRSGRLGSILQMEPQDSCMGSQWPELLCMMSACTTSPSLFSCSMSTARYMGLEPCWT 521
EKG S S QM+P DS +G P+L + CTTSPS S S STA+Y G + C T
Sbjct: 679 EKGA*SRCPKSSPQMDPHDSRIGVHVPKLAPLGPPCTTSPSPSSYSPSTAKYTGFDXCST 500
Query: 522 RKV 530
KV
Sbjct: 499 WKV 491
Score = 52.4 bits (108), Expect(4) = 2e-023
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2 / -2
Query: 545 EVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
E+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 477 ELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 373
Score = 25.8 bits (50), Expect(4) = 2e-023
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / -3
Query: 371 VDPPDGAPGLVHGLP 415
V PPDG+P L H P
Sbjct: 650 VKPPDGSPRLAHRRP 606
Score = 23.5 bits (45), Expect(4) = 2e-023
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2 / -3
Query: 482 EHGQVHGVGAVLDAEG 529
+HG+VH V +L EG
Sbjct: 539 QHGEVHRVRXLLHVEG 492
Score = 22.6 bits (43), Expect(3) = 7e-043
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 425 LRPLGAHARVLGLHL 381
LR + A ARV+G+HL
Sbjct: 596 LRYVDADARVVGIHL 640
>gb|BQ465138.1|BQ465138 HU02M06r HU Hordeum vulgare subsp. vulgare cDNA clone HU02M06
5-PRIME, mRNA sequence
Length = 623
Score = 180 bits (388), Expect(3) = 2e-083
Identities = 70/106 (66%), Positives = 85/106 (80%)
Frame = -3 / +2
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+ H ACSG +TV+ITDMNYYPVA YHFDLSGTAFG +A G ND+LRHAGIID+QF RV
Sbjct: 164 TKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRV 343
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSG 419
C FPGL + F V+ GSN +Y+A+L+E+EN DGDVVQ D+M+S G
Sbjct: 344 ACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRG 481
Score = 118 bits (253), Expect(3) = 1e-049
Identities = 58/97 (59%), Positives = 62/97 (63%)
Frame = +3 / -3
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
M S CTTSPS FS S A Y L+P T PG H T +N MSM+PACRS S RP
Sbjct: 465 MRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRP 286
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQA 725
LA P AVPLRSKW ATG**FMSV+ITV PE A
Sbjct: 285 GLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHA 175
Score = 118 bits (252), Expect(3) = 2e-083
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = -3 / +2
Query: 895 GAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLK 737
GAP GAGP DNGGACGFK N+YPF +MTSCGN+P+FKDGKGCG+CY+I+C K
Sbjct: 11 GAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTK 169
Score = 103 bits (219), Expect(3) = 7e-035
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = -2 / +1
Query: 725 GLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQL 546
G+LR DGD HGHELLPGG +PLRP+RH +R Q P+R+AP RR HRH V G V++
Sbjct: 175 GVLRAAGDGDDHGHELLPGGALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRV 354
Query: 545 PGPDHHLPRPARLQ 504
PG + +PR +Q
Sbjct: 355 PGAEGGVPRGGGVQ 396
Score = 84.5 bits (178), Expect(3) = 1e-049
Identities = 37/55 (67%), Positives = 39/55 (70%)
Frame = +3 / -3
Query: 732 LLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAP 896
L F H I *H PQPLPSL G LPQ+VM NGY LNP APPLS GPAP+GAP
Sbjct: 174 LCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGAP 10
Score = 53.8 bits (111), Expect(3) = 7e-035
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -2 / +1
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQ 732
+RVQ +PVPV HD+L Q A +QGRQGLR ML D V E Q
Sbjct: 52 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQ 174
Score = 50.6 bits (104), Expect(3) = 2e-083
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -3 / +3
Query: 382 WRIDPNRPLRGPFSMRITNESGRQLVAKNV 293
WR+D N L+ PFS+RI NESG+ LVA+NV
Sbjct: 534 WRLDSNHRLQAPFSIRIRNESGKTLVARNV 623
Score = 32.7 bits (65), Expect(3) = 1e-049
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2 / -1
Query: 317 AGLVGDAHGEGATERAVGVDPPDGAP 394
AGLV DA GE E VGV+ P+ P
Sbjct: 599 AGLVADADGEWRLETMVGVEAPEWIP 522
Score = 29.0 bits (57), Expect(3) = 7e-035
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3 / +2
Query: 457 DVVQADIMQSNSGHWEPMHESWGSI 383
D++++ + G W M ESWGSI
Sbjct: 458 DLMESGRGRRGGGRWTRMRESWGSI 532
>gb|BI958784.1|BI958784 HVSMEn0016J13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016J13f, mRNA sequence
Length = 656
Score = 178 bits (383), Expect(2) = 4e-083
Identities = 68/99 (68%), Positives = 84/99 (84%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 360 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 539
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQAD 440
PC FPGL +TF V+ GSNP+Y AVL+E+E+ DGD V D
Sbjct: 540 PCEFPGLKVTFHVEQGSNPVYFAVLVEYEDGDGDXVXVD 656
Score = 150 bits (323), Expect(2) = 4e-083
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 156 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 335
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 336 GSCYQIRC 359
Score = 150 bits (322), Expect(2) = 5e-068
Identities = 68/101 (67%), Positives = 73/101 (72%)
Frame = +3 / -2
Query: 441 SACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQL 620
S CT SPS S S STA+Y G +PC T KV +RPG HGT LN MSM+P CRS S RP L
Sbjct: 655 STCTXSPSPSSYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGL 476
Query: 621 AMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFR 743
AM PNAVPLRSKWYLATG**FMSVM TV PEQ L+ R
Sbjct: 475 AMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHR 353
Score = 128 bits (274), Expect(2) = 5e-068
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -2
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 358 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 179
Score = 111 bits (237), Expect(2) = 1e-044
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 362 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 541
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P LPR A ++P V
Sbjct: 542 VRVPWSQGDLPRGAGVEPGV 601
Score = 89.0 bits (188), Expect(2) = 1e-044
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 179 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 358
Score = 73.5 bits (154), Expect(2) = 2e-025
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2 / -1
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+HG+VH V +L EG + RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 614 QHGEVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 447
Score = 62.5 bits (130), Expect(2) = 2e-025
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -3
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 357 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 265
>gb|CK122346.1|CK122346 BES1824102p12 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010P122 5-PRIME, mRNA sequence
Length = 717
Score = 176 bits (378), Expect(3) = 2e-082
Identities = 69/99 (69%), Positives = 83/99 (83%)
Frame = -3 / +1
Query: 724 ACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNF 545
+CSG +TVIITDMNYYPVA YHFDLSGTAFG +A GLND+LRH+GIID++F RVPC F
Sbjct: 94 SCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEF 273
Query: 544 PGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQS 428
PGL I F V+ SNP+Y AVL+E+E+ DGDVVQ D+M+S
Sbjct: 274 PGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMES 390
Score = 118 bits (252), Expect(3) = 2e-047
Identities = 59/96 (61%), Positives = 64/96 (66%)
Frame = +3 / -2
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
M S CTTSPS S S STA+ G E T ++ PG HGTR+N MSM+P RSLS P
Sbjct: 383 MRSTCTTSPSPSSYSTSTAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSP 204
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQ 722
A PNAVPLRSKW ATG**FMSVMITV PEQ
Sbjct: 203 GFASLPNAVPLRSKW*GATG**FMSVMITVSVLPEQ 96
Score = 105 bits (225), Expect(3) = 1e-030
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = -2 / +3
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGDHH HELLPGG +PLRP+RH VR + +RQAP R HRH V G
Sbjct: 81 QEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSVRQARKARAQRQAPPLRHHRHRVHTG 260
Query: 557 AVQLPGPDHHLPRPARLQPHV 495
AV++PG +PR L+P +
Sbjct: 261 AVRVPGAQDRVPRGGVLEPRL 323
Score = 99.6 bits (211), Expect(3) = 2e-082
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -3 / +1
Query: 421 GHWEPMHESWGSIWRIDPNRPLRGPFSMRITNESGRQLVAKNVIPANYIPDVDYRSFVQY 242
G W M ESWGS+WR+D N L+ PFS+RI NESG+ LVA VIPAN+ P+ YRSFVQY
Sbjct: 406 GKWTRMRESWGSVWRLDSNHRLQAPFSIRIRNESGKTLVANKVIPANWRPNTFYRSFVQY 585
Query: 241 **S 233
*S
Sbjct: 586 S*S 594
Score = 70.7 bits (148), Expect(3) = 2e-082
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = -3 / +1
Query: 823 FSSMTSCGNEPIFKDGKGCGSCYQIRCLK 737
F+SMTSCGN+P+FKDGKGCGSCY+IRC K
Sbjct: 1 FASMTSCGNQPLFKDGKGCGSCYKIRCRK 87
Score = 64.8 bits (135), Expect(3) = 2e-047
Identities = 34/60 (56%), Positives = 37/60 (61%)
Frame = +3 / -2
Query: 243 YWTKER*STSGM*LAGMTFLATSCLPDSLVMRMEKGPRSGRLGSILQMEPQDSCMGSQWP 422
Y TKER* G+ LAGMT LATS LPDSL MRME G L S Q EP DS + +P
Sbjct: 584 YCTKER*KVLGLQLAGMTLLATSVLPDSLRMRMENGAWRRWLESRRQTEPHDSLILVHFP 405
Score = 55.1 bits (114), Expect(3) = 3e-022
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +2 / -1
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+H +V GV +L E D + RE+ARHP EL VDD GV E VV+ ER AA+
Sbjct: 336 QHREVDGVRVLLHVEPDLEPRELARHPCELDVDDAGVAEPVVEPGLCEPAERCAAE 169
Score = 46.9 bits (96), Expect(3) = 3e-022
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2 / -1
Query: 317 AGLVGDAHGEGATERAVGVDPPDGAPGLVHGLPVA 421
AGLV DA GE E VGV+ PDGAP L H P++
Sbjct: 510 AGLVADADGEWRLEAVVGVEAPDGAPRLPHPRPLS 406
Score = 45.5 bits (93), Expect(3) = 2e-047
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +3 / -2
Query: 738 FRHRIW*HEPQPLPSLKMGSLPQDVMD 818
F H I *HEP PLPSL G LPQ+VMD
Sbjct: 86 FLHLIL*HEPHPLPSLNNGWLPQEVMD 6
Score = 40.9 bits (83), Expect(3) = 3e-022
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = +1 / -3
Query: 751 SGSMSRNPCRP*RWARCHRTSWTR 822
S SMSR PCRP* A C R SWTR
Sbjct: 73 SCSMSRIPCRP*TMAGCRRRSWTR 2
Score = 40.0 bits (81), Expect(3) = 1e-030
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = -2 / +3
Query: 818 VHDVLWQRAHLQGRQGLRLMLPDTVPE 738
VHD+L Q A +QGRQG+RLML D + E
Sbjct: 6 VHDLLRQPAIVQGRQGMRLMLQDQMQE 86
Score = 25.8 bits (50), Expect(3) = 1e-030
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 399 SPGAPSGGSTPT 364
S GAPSG STPT
Sbjct: 428 SRGAPSGASTPT 463
>gb|BI957603.1|BI957603 HVSMEn0010F11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F11f, mRNA sequence
Length = 630
Score = 177 bits (382), Expect(2) = 1e-081
Identities = 67/103 (65%), Positives = 88/103 (85%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 322 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 501
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQS 428
PC FPGL +TF V+ GSNP+Y VL+E+ + DG++VQ D+M++
Sbjct: 502 PCEFPGLKVTFHVEQGSNPVYFPVLVEY*DGDGNLVQVDLMEA 630
Score = 146 bits (314), Expect(2) = 1e-081
Identities = 54/68 (79%), Positives = 58/68 (85%)
Frame = -3 / +1
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGA TGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 118 SAFTADPNWEDARATWYGARTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 297
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 298 GSCYQIRC 321
Score = 143 bits (307), Expect(2) = 8e-065
Identities = 66/103 (64%), Positives = 71/103 (68%)
Frame = +3 / -2
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
M S CT PS S ST +Y G +PC T KV +RPG HGT LN MSM+P CRS S RP
Sbjct: 623 MRSTCTKLPSPS*YSTSTGKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRP 444
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFR 743
LAM PNAVPLRSKWYLATG**FMSVM TV PEQ L+ R
Sbjct: 443 GLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHR 315
Score = 124 bits (266), Expect(2) = 8e-065
Identities = 50/60 (83%), Positives = 51/60 (85%)
Frame = +3 / -2
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPV APYQVALA SQ
Sbjct: 320 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVRAPYQVALASSQ 141
Score = 111 bits (237), Expect(2) = 1e-044
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -2 / +3
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 324 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 503
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P LPR A ++P V
Sbjct: 504 VRVPWSQGDLPRGAGVEPGV 563
Score = 89.0 bits (188), Expect(2) = 1e-044
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +3
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 141 LGGRQGHLVRRADGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 320
Score = 73.5 bits (154), Expect(2) = 2e-025
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2 / -1
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+HG+VH V +L EG + RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 576 QHGEVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 409
Score = 62.5 bits (130), Expect(2) = 2e-025
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -3
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 319 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 227
>gb|BI960458.1|BI960458 HVSMEn0024K16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024K16f, mRNA sequence
Length = 677
Score = 173 bits (372), Expect(2) = 2e-081
Identities = 66/101 (65%), Positives = 83/101 (82%)
Frame = -3 / +2
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 374 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 553
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIM 434
PC FPGL +T V+ GSNP+Y VL+E+ + D D VQ D+M
Sbjct: 554 PCEFPGLKVTXHVEQGSNPVYFXVLVEYXDGDXDXVQVDLM 676
Score = 150 bits (322), Expect(2) = 2e-081
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = -3 / +2
Query: 922 WLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 743
W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC
Sbjct: 194 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 373
Score = 145 bits (311), Expect(2) = 2e-066
Identities = 66/103 (64%), Positives = 71/103 (68%)
Frame = +3 / -3
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
M S CT S S S ST +Y G +PC T KV +RPG HGT LN MSM+P CRS S RP
Sbjct: 675 MRSTCTXSXSPSXYSTSTXKYTGFDPCSTXKVTLRPGNSHGTLLNWMSMMPECRSFSLRP 496
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFR 743
LAM PNAVPLRSKWYLATG**FMSVM TV PEQ L+ R
Sbjct: 495 GLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQDWSLVHR 367
Score = 128 bits (274), Expect(2) = 2e-066
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 372 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 193
Score = 107 bits (228), Expect(2) = 2e-043
Identities = 47/80 (58%), Positives = 54/80 (67%)
Frame = -2 / +1
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 376 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 555
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P L R A ++P V
Sbjct: 556 VRVPWSQGDLXRGAGVEPGV 615
Score = 89.0 bits (188), Expect(2) = 2e-043
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +1
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 193 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 372
Score = 70.7 bits (148), Expect(2) = 2e-024
Identities = 30/56 (53%), Positives = 37/56 (66%)
Frame = +2 / -2
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+HG+VH V +L G + RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 628 QHGEVHRVRPLLHVXGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 461
Score = 62.5 bits (130), Expect(2) = 2e-024
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 371 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 279
>gb|CK123980.1|CK123980 BES1824106f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F166 5-PRIME, mRNA sequence
Length = 750
Score = 180 bits (388), Expect(3) = 2e-081
Identities = 70/106 (66%), Positives = 85/106 (80%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+ H ACSG +TV+ITDMNYYPVA YHFDLSGTAFG +A G ND+LRHAGIID+QF RV
Sbjct: 199 TKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRV 378
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSG 419
C FPGL + F V+ GSN +Y+A+L+E+EN DGDVVQ D+M+S G
Sbjct: 379 ACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRG 516
Score = 133 bits (285), Expect(3) = 2e-081
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = -3 / +1
Query: 913 AKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLK 737
A+ATWYGAP GAGP DNGGACGFK N+YPF +MTSCGN+P+FKDGKGCG+CY+I+C K
Sbjct: 28 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTK 204
Score = 118 bits (253), Expect(3) = 6e-056
Identities = 58/97 (59%), Positives = 62/97 (63%)
Frame = +3 / -2
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
M S CTTSPS FS S A Y L+P T PG H T +N MSM+PACRS S RP
Sbjct: 500 MRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRP 321
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQA 725
LA P AVPLRSKW ATG**FMSV+ITV PE A
Sbjct: 320 GLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHA 210
Score = 103 bits (219), Expect(3) = 2e-050
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = -2 / +3
Query: 725 GLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQL 546
G+LR DGD HGHELLPGG +PLRP+RH +R Q P+R+AP RR HRH V G V++
Sbjct: 210 GVLRAAGDGDDHGHELLPGGALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRV 389
Query: 545 PGPDHHLPRPARLQ 504
PG + +PR +Q
Sbjct: 390 PGAEGGVPRGGGVQ 431
Score = 94.5 bits (200), Expect(3) = 6e-056
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +3 / -2
Query: 732 LLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVAL 911
L F H I *H PQPLPSL G LPQ+VM NGY LNP APPLS GPAP+GAPYQVA
Sbjct: 209 LCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGAPYQVAR 30
Query: 912 A 914
A
Sbjct: 29 A 27
Score = 81.7 bits (172), Expect(3) = 2e-050
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = -3 / +1
Query: 457 DVVQADIMQSNSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITNESGRQLVAKNVIP 287
D++++ + G W M ESWGSIWR+D N L+ PFS+RI NESG+ LVA+NVIP
Sbjct: 493 DLMESGRGRRGGGRWTRMRESWGSIWRLDSNHRLQAPFSIRIRNESGKTLVARNVIP 663
Score = 57.4 bits (119), Expect(3) = 2e-022
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +2 / -1
Query: 494 VHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
VH VG +L E Q RE+ARHP EL VDD GV ELVV A G E AA+
Sbjct: 441 VHRVGPLLHVEPHLQPRELARHPGELDVDDAGVSELVVAAGLGELAEGGAAE 286
Score = 53.8 bits (111), Expect(3) = 2e-050
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -2 / +3
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQ 732
+RVQ +PVPV HD+L Q A +QGRQGLR ML D V E Q
Sbjct: 87 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQ 209
Score = 43.7 bits (89), Expect(3) = 6e-056
Identities = 22/38 (57%), Positives = 23/38 (60%)
Frame = +3 / -2
Query: 288 GMTFLATSCLPDSLVMRMEKGPRSGRLGSILQMEPQDS 401
GMT ATS PDSL MRME G L S QM+P DS
Sbjct: 662 GMTLRATSVXPDSLRMRMENGAWRRWLESRRQMDPHDS 549
Score = 43.2 bits (88), Expect(3) = 2e-022
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = +1 / -3
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTG 834
T S SM R+PCRP* A C R SW TGTG
Sbjct: 196 T*SCSMRRSPCRP*TAAGCRRRSWP*TGTG 107
Score = 43.2 bits (88), Expect(3) = 2e-022
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 320 GLVGDAHGEGATERAVGVDPPDGAPGLVHGLP 415
GLV DA GE E VGV+ PDG+P L H P
Sbjct: 630 GLVADADGEWRLETMVGVEAPDGSPRLAHPRP 535
Score = 28.6 bits (56), Expect(3) = 2e-081
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1 / +2
Query: 414 GSPCTSPGAPSGGSTPT 364
G C S G PSG STPT
Sbjct: 536 GRGCASRGDPSGASTPT 586
>gb|CV063456.1|CV063456 BNEL8E2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL8E2 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 546
Score = 301 bits (652), Expect = 4e-081
Identities = 113/144 (78%), Positives = 128/144 (88%)
Frame = -3 / +1
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 109 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 288
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 289 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 468
Query: 571 QFRRVPCNFPGLTITFRVQHGSNP 500
QF+RVPC +PGLT+TF V+ GSNP
Sbjct: 469 QFKRVPCQYPGLTVTFHVEEGSNP 540
Score = 217 bits (468), Expect = 1e-055
Identities = 96/141 (68%), Positives = 103/141 (73%)
Frame = +3 / -2
Query: 501 GLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG** 680
G +P T V V PG HGT LNCM ++PA RS S RP LAM P AVPLRSKW TG *
Sbjct: 539 GFDPSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS* 360
Query: 681 FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAP 860
FMSVMITV TPE AGW F+H IW* EPQPLPSLK G LPQ+VM+E G L LNPHAP
Sbjct: 359 FMSVMITVLGTPEHAGWSEFKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAP 180
Query: 861 PLSTGPAPVGAPYQVALAGSQ 923
PLS+GPAPVG PY VALA SQ
Sbjct: 179 PLSSGPAPVGLPYHVALASSQ 117
Score = 149 bits (319), Expect = 4e-035
Identities = 64/118 (54%), Positives = 82/118 (69%)
Frame = -2 / +3
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDHH HEL
Sbjct: 186 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAQDGDHHRHELR 365
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPRPARLQP 501
PG +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV +PG D +PR ++P
Sbjct: 366 PGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPRGGGVEP 539
>gb|BU995090.1|BU995090 HM09C23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09C23
5-PRIME, mRNA sequence
Length = 653
Score = 167 bits (359), Expect(2) = 8e-080
Identities = 63/90 (70%), Positives = 79/90 (87%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 382 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 561
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHEN 467
PC FPGL +TF V+ GSNP+Y AVL+E+E+
Sbjct: 562 PCEFPGLKVTFHVEQGSNPVYFAVLVEYED 651
Score = 150 bits (323), Expect(2) = 8e-080
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +1
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 178 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 357
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 358 GSCYQIRC 381
Score = 137 bits (294), Expect(2) = 4e-064
Identities = 62/91 (68%), Positives = 67/91 (73%)
Frame = +3 / -1
Query: 471 SCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLR 650
S S STA+Y G +PC T KV +RPG HGT LN MSM+P CRS S RP LAM PNAVPLR
Sbjct: 647 SYSTSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLR 468
Query: 651 SKWYLATG**FMSVMITV*ATPEQAGWLLFR 743
SKWYLATG**FMSVM TV PEQ L+ R
Sbjct: 467 SKWYLATG**FMSVMTTVSGLPEQDWSLVHR 375
Score = 128 bits (274), Expect(2) = 4e-064
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -1
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 380 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 201
Score = 111 bits (237), Expect(2) = 1e-044
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -2 / +3
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 384 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 563
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P LPR A ++P V
Sbjct: 564 VRVPWSQGDLPRGAGVEPGV 623
Score = 89.0 bits (188), Expect(2) = 1e-044
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +3
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 201 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 380
Score = 73.5 bits (154), Expect(2) = 2e-025
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2 / -3
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+HG+VH V +L EG + RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 636 QHGEVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 469
Score = 62.5 bits (130), Expect(2) = 2e-025
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -2
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 379 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 287
>gb|CV061225.1|CV061225 BNEL66d10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL66d10 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 539
Score = 295 bits (638), Expect = 4e-079
Identities = 111/143 (77%), Positives = 126/143 (88%)
Frame = -3 / +1
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 109 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 288
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 289 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 468
Query: 571 QFRRVPCNFPGLTITFRVQHGSN 503
QF+RVPC +P LT+TF V+ GSN
Sbjct: 469 QFKRVPCQYPXLTVTFHVEEGSN 537
Score = 213 bits (459), Expect = 2e-054
Identities = 95/141 (67%), Positives = 102/141 (72%)
Frame = +3 / -1
Query: 501 GLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG** 680
G +P T V V G HGT LNCM ++PA RS S RP LAM P AVPLRSKW TG *
Sbjct: 539 GFDPSSTWNVTVNXGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS* 360
Query: 681 FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAP 860
FMSVMITV TPE AGW F+H IW* EPQPLPSLK G LPQ+VM+E G L LNPHAP
Sbjct: 359 FMSVMITVLGTPEHAGWSEFKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAP 180
Query: 861 PLSTGPAPVGAPYQVALAGSQ 923
PLS+GPAPVG PY VALA SQ
Sbjct: 179 PLSSGPAPVGLPYHVALASSQ 117
Score = 149 bits (319), Expect = 4e-035
Identities = 64/118 (54%), Positives = 82/118 (69%)
Frame = -2 / +3
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDHH HEL
Sbjct: 186 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAQDGDHHRHELR 365
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPRPARLQP 501
PG +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV +PG D +PR ++P
Sbjct: 366 PGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPRGGGVEP 539
>gb|BI959353.1|BI959353 HVSMEn0019F12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F12f, mRNA sequence
Length = 669
Score = 150 bits (323), Expect(3) = 8e-079
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +2
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 170 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 349
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 350 GSCYQIRC 373
Score = 131 bits (281), Expect(3) = 8e-079
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = -3 / +2
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 374 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 553
Query: 556 PCNFPGL 536
PC FPGL
Sbjct: 554 PCEFPGL 574
Score = 128 bits (274), Expect(3) = 4e-062
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -1
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 372 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 193
Score = 111 bits (237), Expect(3) = 4e-062
Identities = 50/70 (71%), Positives = 53/70 (75%)
Frame = +3 / -1
Query: 534 VRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*AT 713
+RPG HGT LN MSM+P CRS S RP LAM PNAVPLRSKWYLATG**FMSVM TV
Sbjct: 576 LRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGL 397
Query: 714 PEQAGWLLFR 743
PEQ L+ R
Sbjct: 396 PEQDWSLVHR 367
Score = 101 bits (215), Expect(2) = 1e-041
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +1
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 376 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 555
Query: 554 VQLP 543
V++P
Sbjct: 556 VRVP 567
Score = 89.0 bits (188), Expect(2) = 1e-041
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +1
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 193 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 372
Score = 62.5 bits (130), Expect(3) = 1e-021
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -2
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 371 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 279
Score = 55.6 bits (115), Expect(3) = 1e-021
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2 / -3
Query: 536 QAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+ RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 574 ETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 461
Score = 51.5 bits (106), Expect(3) = 8e-079
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = -3 / +1
Query: 544 PGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQAD 440
P +TF V+ GSNP+Y AVL+E+++ DG VVQ D
Sbjct: 565 PWSQVTFHVEQGSNPVYFAVLVEYQDGDGHVVQVD 669
Score = 38.2 bits (77), Expect(3) = 4e-062
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3 / -2
Query: 441 SACTTSPSLFSCSMSTARYMGLEPCWTRKV 530
S CTT PS S STA+Y G +PC T KV
Sbjct: 668 STCTTWPSPSWYSTSTAKYTGFDPCSTWKV 579
Score = 23.1 bits (44), Expect(3) = 1e-021
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2 / -1
Query: 482 EHGQVHGVGAVLDAEG 529
+HG+VH V +L EG
Sbjct: 627 QHGEVHRVRPLLHVEG 580
>gb|CV054400.1|CV054400 BNEL10B12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL10B12 5' similar to Oryza sativa
beta-expansin, mRNA sequence
Length = 533
Score = 293 bits (635), Expect = 1e-078
Identities = 110/141 (78%), Positives = 125/141 (88%)
Frame = -3 / +3
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 111 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 290
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 291 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 470
Query: 571 QFRRVPCNFPGLTITFRVQHG 509
QF+RVPC +PGLT+TF V+ G
Sbjct: 471 QFKRVPCQYPGLTVTFHVEEG 533
Score = 213 bits (460), Expect = 1e-054
Identities = 95/138 (68%), Positives = 101/138 (73%)
Frame = +3 / -2
Query: 510 PCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMS 689
P T V V PG HGT LNCM ++PA RS S RP LAM P AVPLRSKW TG *FMS
Sbjct: 532 PSSTWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMS 353
Query: 690 VMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLS 869
VMITV TPE AGW F+H IW* EPQPLPSLK G LPQ+VM+E G L LNPHAPPLS
Sbjct: 352 VMITVLGTPEHAGWSEFKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLS 173
Query: 870 TGPAPVGAPYQVALAGSQ 923
+GPAPVG PY VALA SQ
Sbjct: 172 SGPAPVGLPYHVALASSQ 119
Score = 146 bits (313), Expect = 2e-034
Identities = 63/112 (56%), Positives = 79/112 (70%)
Frame = -2 / +2
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDHH HEL
Sbjct: 188 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAQDGDHHRHELR 367
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPR 519
PG +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV +PG D +PR
Sbjct: 368 PGLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAVPVPGVDGDVPR 523
>gb|BQ767787.1|BQ767787 EBro08_SQ009_H22_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ009_H22 5', mRNA sequence
Length = 631
Score = 160 bits (344), Expect(2) = 1e-078
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S +SYSS WLPA+ATWYGAP GAGP DNGGACGFK NQYPFSSMTSCGN+P+FKDGKGC
Sbjct: 171 SAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQPLFKDGKGC 350
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 351 GSCYQIRC 374
Score = 154 bits (330), Expect(2) = 1e-078
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
S +CSG +TV+ITDMNYYPVA+YHFDLSGTAFG++A GLN+KLRH+GIID+QF+RV
Sbjct: 375 SGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFKRV 554
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVL 482
PCNFPGL I F V GSN +YLAVL
Sbjct: 555 PCNFPGLKINFHVVEGSNAVYLAVL 629
Score = 124 bits (266), Expect(3) = 1e-059
Identities = 56/81 (69%), Positives = 62/81 (76%)
Frame = +3 / -1
Query: 480 MSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKW 659
+STARY LEP T K+++RPGKLHGT LN MSM+P RS S RP LA P AVPLRSKW
Sbjct: 631 ISTARYTALEPSTTWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKW 452
Query: 660 YLATG**FMSVMITV*ATPEQ 722
Y ATG**FMSV+ITV PEQ
Sbjct: 451 YWATG**FMSVIITVSMLPEQ 389
Score = 120 bits (256), Expect(3) = 1e-059
Identities = 48/69 (69%), Positives = 54/69 (78%)
Frame = +3 / -1
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EPQPLPSL G LPQ+VM+E GYW L P APPLS+GPAP+GAPYQVALAGS
Sbjct: 373 HRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQAPPLSSGPAPLGAPYQVALAGSH 194
Query: 924 PLL*DNKDL 950
L*D ++
Sbjct: 193 AEL*DTAEV 167
Score = 113 bits (241), Expect(2) = 1e-038
Identities = 49/82 (59%), Positives = 56/82 (68%)
Frame = -2 / +2
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGD H HELLPG VPL PERHG+R GQ+GP+R+AP HRH VQ G
Sbjct: 374 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 553
Query: 557 AVQLPGPDHHLPRPARLQPHVP 492
AVQLP P LPR LQ VP
Sbjct: 554 AVQLPRPQDQLPRGGGLQRGVP 619
Score = 67.0 bits (140), Expect(2) = 1e-038
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = -2 / +2
Query: 938 VLQQWLAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLM 759
VLQ +A GQ LV R +R+Q +PVP+L+HD+L Q A +QGRQGLRL+
Sbjct: 179 VLQLRVAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLL 358
Query: 758 LPDTV 744
LPDT+
Sbjct: 359 LPDTM 373
Score = 24.4 bits (47), Expect(3) = 1e-059
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2 / -1
Query: 1004 RGDDDHGEERGQCQGLEGQRGGHCLLHSC 1090
RGD + G+ GL+ + GH L SC
Sbjct: 145 RGDIRGSKHGGERDGLDREYPGHLQLLSC 59
>gb|BI959698.1|BI959698 HVSMEn0020N13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020N13f, mRNA sequence
Length = 630
Score = 163 bits (351), Expect(2) = 1e-078
Identities = 62/87 (71%), Positives = 76/87 (87%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 369 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 548
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIE 476
PC FPGL +TF V+ GSNP+Y AVL+E
Sbjct: 549 PCEFPGLKVTFHVEQGSNPVYFAVLVE 629
Score = 150 bits (322), Expect(2) = 1e-078
Identities = 54/60 (90%), Positives = 57/60 (95%)
Frame = -3 / +3
Query: 922 WLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 743
W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC
Sbjct: 189 WEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 368
Score = 136 bits (292), Expect(2) = 7e-064
Identities = 61/89 (68%), Positives = 66/89 (74%)
Frame = +3 / -3
Query: 477 SMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSK 656
S STA+Y G +PC T KV +RPG HGT LN MSM+P CRS S RP LAM PNAVPLRSK
Sbjct: 628 STSTAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSK 449
Query: 657 WYLATG**FMSVMITV*ATPEQAGWLLFR 743
WYLATG**FMSVM TV PEQ L+ R
Sbjct: 448 WYLATG**FMSVMTTVSGLPEQDWSLVHR 362
Score = 128 bits (274), Expect(2) = 7e-064
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 367 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 188
Score = 111 bits (237), Expect(2) = 1e-044
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 371 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 550
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P LPR A ++P V
Sbjct: 551 VRVPWSQGDLPRGAGVEPGV 610
Score = 89.0 bits (188), Expect(2) = 1e-044
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 188 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 367
Score = 73.0 bits (153), Expect(2) = 3e-025
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2 / -2
Query: 482 EHGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
+HG+VH V +L EG + RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 623 QHGKVHRVRPLLHVEGHLETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 456
Score = 62.5 bits (130), Expect(2) = 3e-025
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 366 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 274
>gb|CA019997.1|CA019997 HV14A15r HV Hordeum vulgare subsp. vulgare cDNA clone HV14A15
5-PRIME, mRNA sequence
Length = 616
Score = 180 bits (388), Expect(2) = 1e-078
Identities = 70/106 (66%), Positives = 85/106 (80%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+ H ACSG +TV+ITDMNYYPVA YHFDLSGTAFG +A G ND+LRHAGIID+QF RV
Sbjct: 247 TKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRV 426
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSG 419
C FPGL + F V+ GSN +Y+A+L+E+EN DGDVVQ D+M+S G
Sbjct: 427 ACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRG 564
Score = 133 bits (285), Expect(2) = 1e-078
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = -3 / +1
Query: 913 AKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLK 737
A+ATWYGAP GAGP DNGGACGFK N+YPF +MTSCGN+P+FKDGKGCG+CY+I+C K
Sbjct: 76 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTK 252
Score = 118 bits (253), Expect(2) = 2e-048
Identities = 58/97 (59%), Positives = 62/97 (63%)
Frame = +3 / -3
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
M S CTTSPS FS S A Y L+P T PG H T +N MSM+PACRS S RP
Sbjct: 548 MRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRP 369
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQA 725
LA P AVPLRSKW ATG**FMSV+ITV PE A
Sbjct: 368 GLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHA 258
Score = 103 bits (219), Expect(3) = 7e-035
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = -2 / +3
Query: 725 GLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQL 546
G+LR DGD HGHELLPGG +PLRP+RH +R Q P+R+AP RR HRH V G V++
Sbjct: 258 GVLRAAGDGDDHGHELLPGGALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRV 437
Query: 545 PGPDHHLPRPARLQ 504
PG + +PR +Q
Sbjct: 438 PGAEGGVPRGGGVQ 479
Score = 94.5 bits (200), Expect(2) = 2e-048
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +3 / -3
Query: 732 LLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVAL 911
L F H I *H PQPLPSL G LPQ+VM NGY LNP APPLS GPAP+GAPYQVA
Sbjct: 257 LCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGAPYQVAR 78
Query: 912 A 914
A
Sbjct: 77 A 75
Score = 53.8 bits (111), Expect(3) = 7e-035
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -2 / +3
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQ 732
+RVQ +PVPV HD+L Q A +QGRQGLR ML D V E Q
Sbjct: 135 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQ 257
Score = 29.0 bits (57), Expect(3) = 7e-035
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3 / +1
Query: 457 DVVQADIMQSNSGHWEPMHESWGSI 383
D++++ + G W M ESWGSI
Sbjct: 541 DLMESGRGRRGGGRWTRMRESWGSI 615
>gb|BI949344.1|BI949344 HVSMEl0013G22f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013G22f, mRNA sequence
Length = 488
Score = 291 bits (629), Expect = 6e-078
Identities = 109/139 (78%), Positives = 124/139 (89%)
Frame = -3 / +2
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 71 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 250
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 251 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 430
Query: 571 QFRRVPCNFPGLTITFRVQ 515
QF+RVPC +PGLT+TF V+
Sbjct: 431 QFKRVPCQYPGLTVTFHVE 487
Score = 213 bits (459), Expect = 2e-054
Identities = 98/148 (66%), Positives = 105/148 (70%)
Frame = +3 / -3
Query: 519 TRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMI 698
T V V PG HGT LNCM ++PA RS S RP LAM P AVPLRSKW TG *FMSVMI
Sbjct: 483 TWNVTVNPGYWHGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMI 304
Query: 699 TV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGP 878
TV TPE AGW F+H IW* EPQPLPSLK G LPQ+VM+E G L LNPHAPPLS+GP
Sbjct: 303 TVFGTPEHAGWSEFKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGP 124
Query: 879 APVGAPYQVALAGSQPLL*DNKDLSCEA 962
APVG PY VALA SQ L +SC A
Sbjct: 123 APVGLPYHVALASSQLELAAG*GVSCLA 40
Score = 142 bits (304), Expect = 4e-033
Identities = 61/112 (54%), Positives = 78/112 (69%)
Frame = -2 / +1
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDHH HEL
Sbjct: 148 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAEDGDHHRHELR 327
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQLPGPDHHLPR 519
P +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GA+ +PG D +PR
Sbjct: 328 PSLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAMPVPGVDGDVPR 483
>gb|AL504600.1|AL504600 AL504600 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05M13V 5', mRNA sequence
Length = 700
Score = 255 bits (551), Expect(2) = 2e-077
Identities = 94/133 (70%), Positives = 110/133 (82%)
Frame = -3 / +3
Query: 937 SYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSC 758
SY+SGWLPAKATWYGAP G GP DNGGACGFK NQYP SSM +CGNEPI+ DG+GCG C
Sbjct: 198 SYNSGWLPAKATWYGAPNGPGPDDNGGACGFKNVNQYPISSMGACGNEPIYADGEGCGMC 377
Query: 757 YQIRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGII 578
Y+I+C +N+P+CSG + ++I DMNYYPVA+YH DLSGTAFGSMA +GLN++LRHAGII
Sbjct: 378 YEIKCEYNNNPSCSGQPRRIVIIDMNYYPVARYHLDLSGTAFGSMARYGLNEQLRHAGII 557
Query: 577 DMQFRRVPCNFPG 539
DMQFR PG
Sbjct: 558 DMQFREGALQLPG 596
Score = 202 bits (436), Expect(2) = 9e-057
Identities = 88/133 (66%), Positives = 98/133 (73%)
Frame = +3 / -1
Query: 540 PGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPE 719
PG LNCMSM+PA RS S RP LAM+PNAVPLRS+WYLATG**FMS+M + PE
Sbjct: 595 PGSCSAPSLNCMSMMPAWRSCSLRPYLAMEPNAVPLRSRWYLATG**FMSMMTILLGWPE 416
Query: 720 QAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPY 899
Q G LL+ H I *H PQP PS +GSLP M+E GYW L P APPLS+GP P+GAPY
Sbjct: 415 QEGLLLYSHLIS*HMPQPSPSAYIGSLPHAPMEEIGYWFTFLKPQAPPLSSGPGPLGAPY 236
Query: 900 QVALAGSQPLL*D 938
QVALAGSQP L*D
Sbjct: 235 QVALAGSQPEL*D 197
Score = 136 bits (291), Expect(2) = 8e-036
Identities = 62/127 (48%), Positives = 80/127 (62%)
Frame = -2 / +2
Query: 938 VLQQWLAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLM 759
+LQ LA QGHLV RWC+R+Q +PVP L+H + RA+++ R+GL +
Sbjct: 197 ILQLRLAPRQGHLVRSAQWPRSRRQRWCLRLQEREPVPNLLHGGMR*RAYIRRRRGLWHV 376
Query: 758 LPDTVPEEQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDH 579
L D + +Q P LLR + HH HELLP GQVP RP+ H VR+HGQ+ P+R AP R H
Sbjct: 377 LRD*MRVQQQPFLLRPAEEDRHHRHELLPRGQVPPRPQWHRVRLHGQVRPQRAAPPCRHH 556
Query: 578 RHAVQAG 558
RHAVQ G
Sbjct: 557 RHAVQGG 577
Score = 54.7 bits (113), Expect(2) = 2e-077
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = -3 / +1
Query: 562 RVPCNFPGLTITFRVQHGSNPMYLAVLI 479
RV CNFPG+ ITF VQ GSNP YLAVL+
Sbjct: 574 RVRCNFPGMKITFHVQRGSNPNYLAVLV 657
Score = 38.6 bits (78), Expect(2) = 9e-057
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3 / -3
Query: 483 STARYMGLEPCWTRKVMVRPGKLHGT 560
STAR +GLEP WT KV+ PGKL T
Sbjct: 653 STAR*LGLEPRWT*KVIFIPGKLQRT 576
Score = 35.0 bits (70), Expect(2) = 8e-036
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 560 GAVQLPGPDHHLPRPARLQPHVP 492
GA+QLPG +++L RPA LQP +P
Sbjct: 576 GALQLPGYENNLSRPAWLQP*LP 644
>gb|BI959654.1|BI959654 HVSMEn0020K03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020K03f, mRNA sequence
Length = 679
Score = 155 bits (332), Expect(2) = 1e-076
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = -3 / +2
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
S GW A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGCGSCYQ
Sbjct: 179 SGGWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 358
Query: 751 IRC 743
IRC
Sbjct: 359 IRC 367
Score = 152 bits (327), Expect(2) = 1e-076
Identities = 58/86 (67%), Positives = 72/86 (83%)
Frame = -3 / +2
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KL H+GIID+QF+RV
Sbjct: 368 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLPHSGIIDIQFKRV 547
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLI 479
PC FPGL +TF V+ GSNP+Y L+
Sbjct: 548 PCEFPGLKVTFHVEQGSNPVYFPRLV 625
Score = 132 bits (282), Expect(2) = 1e-062
Identities = 53/63 (84%), Positives = 54/63 (85%)
Frame = +3 / -2
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 366 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 187
Query: 924 PLL 932
P L
Sbjct: 186 PPL 178
Score = 128 bits (275), Expect(2) = 1e-062
Identities = 58/87 (66%), Positives = 63/87 (72%)
Frame = +3 / -2
Query: 483 STARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWY 662
S +Y GL+PC T KV +RPG HGT LN MSM+P C S S RP LAM PNAVPLRSKWY
Sbjct: 621 SRGKYTGLDPCST*KVTLRPGNSHGTLLNWMSMMPECGSFSLRPGLAMAPNAVPLRSKWY 442
Query: 663 LATG**FMSVMITV*ATPEQAGWLLFR 743
LATG**FMSVM TV PEQ L+ R
Sbjct: 441 LATG**FMSVMTTVSGLPEQDWSLVHR 361
Score = 110 bits (235), Expect(2) = 2e-044
Identities = 48/80 (60%), Positives = 54/80 (67%)
Frame = -2 / +1
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 370 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 549
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P L R A +QP V
Sbjct: 550 VRVPWSQSDLSRGAGVQPRV 609
Score = 89.5 bits (189), Expect(2) = 2e-044
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = -2 / +1
Query: 932 QQWLAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLP 753
++ L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LP
Sbjct: 178 ERGLGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLP 357
Query: 752 DTV 744
DTV
Sbjct: 358 DTV 366
Score = 70.7 bits (148), Expect(2) = 2e-024
Identities = 30/54 (55%), Positives = 37/54 (68%)
Frame = +2 / -1
Query: 488 GQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
G+VHGVG +L +G + RE+ARH EL VDD GV EL+ +A GHG ER A Q
Sbjct: 616 GEVHGVGPLLHVKGHFETRELARHSLELDVDDAGVRELLAEAGLGHGAERGATQ 455
Score = 62.5 bits (130), Expect(2) = 2e-024
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -3
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 365 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 273
>gb|BI959720.1|BI959720 HVSMEn0020P05f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0020P05f, mRNA sequence
Length = 615
Score = 158 bits (339), Expect(2) = 3e-076
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 363 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 542
Query: 556 PCNFPGLTITFRVQHGSNPMYLAV 485
PC FPGL +TF V+ GSNP+Y AV
Sbjct: 543 PCEFPGLNVTFHVEXGSNPVYFAV 614
Score = 148 bits (317), Expect(2) = 3e-076
Identities = 53/60 (88%), Positives = 56/60 (93%)
Frame = -3 / +3
Query: 922 WLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 743
W A+ATWYGAPTGAGP+D+GGACGF TNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC
Sbjct: 183 WEDARATWYGAPTGAGPMDDGGACGFNNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRC 362
Score = 133 bits (285), Expect(2) = 5e-063
Identities = 59/86 (68%), Positives = 64/86 (74%)
Frame = +3 / -3
Query: 486 TARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYL 665
TA+Y G +PC T KV +RPG HGT LN MSM+P CRS S RP LAM PNAVPLRSKWYL
Sbjct: 613 TAKYTGFDPCSTWKVTLRPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYL 434
Query: 666 ATG**FMSVMITV*ATPEQAGWLLFR 743
ATG**FMSVM TV PEQ L+ R
Sbjct: 433 ATG**FMSVMTTVSGLPEQDWSLVHR 356
Score = 128 bits (275), Expect(2) = 5e-063
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 361 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVLLNPHAPPSSMGPAPVGAPYQVALASSQ 182
Score = 112 bits (240), Expect(2) = 1e-044
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 365 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 544
Query: 554 VQLPGPDHHLPRPARLQPHV 495
V++P LPR A ++P V
Sbjct: 545 VRVPWSQRDLPRGAXVEPGV 604
Score = 88.1 bits (186), Expect(2) = 1e-044
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 182 LGGRQGHLVRRAHGCRPHGRRWCVRVQ*HQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 361
Score = 72.1 bits (151), Expect(2) = 6e-025
Identities = 31/55 (56%), Positives = 36/55 (65%)
Frame = +2 / -2
Query: 485 HGQVHGVGAVLDAEGDGQAREVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
HG+VH V L EG + RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 614 HGEVHRVRPXLHVEGHVETRELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 450
Score = 62.5 bits (130), Expect(2) = 6e-025
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -1
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 360 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 268
>gb|BF256653.2|BF256653 HVSMEf0010J19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010J19f, mRNA sequence
Length = 841
Score = 167 bits (359), Expect(2) = 1e-074
Identities = 65/99 (65%), Positives = 79/99 (79%)
Frame = -3 / +2
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+ H ACSG +TV+ITDMNYYPVA YHFDLSGTAFG +A G ND+LRHAGIID+QF RV
Sbjct: 464 TKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRV 643
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQAD 440
C FPGL + F V+ GSN +Y+A+ +E EN+DGD+VQ D
Sbjct: 644 ACEFPGLKVGFHVEEGSNAVYMAIPVEVENRDGDLVQVD 760
Score = 133 bits (285), Expect(2) = 1e-074
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = -3 / +2
Query: 913 AKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLK 737
A+ATWYGAP GAGP DNGGACGFK N+YPF +MTSCGN+P+FKDGKGCG+CY+I+C K
Sbjct: 293 ARATWYGAPNGAGPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTK 469
Score = 115 bits (246), Expect(2) = 2e-047
Identities = 56/95 (58%), Positives = 60/95 (63%)
Frame = +3 / -2
Query: 441 SACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQL 620
S CT SPS FS S A Y L+P T PG H T +N MSM+PACRS S RP L
Sbjct: 759 STCTKSPSRFSTSTGIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRPGL 580
Query: 621 AMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQA 725
A P AVPLRSKW ATG**FMSV+ITV PE A
Sbjct: 579 ASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHA 475
Score = 103 bits (219), Expect(2) = 1e-031
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = -2 / +1
Query: 725 GLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQL 546
G+LR DGD HGHELLPGG +PLRP+RH +R Q P+R+AP RR HRH V G V++
Sbjct: 475 GVLRAAGDGDDHGHELLPGGALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRV 654
Query: 545 PGPDHHLPRPARLQ 504
PG + +PR +Q
Sbjct: 655 PGAEGGVPRGGGVQ 696
Score = 94.5 bits (200), Expect(2) = 2e-047
Identities = 42/61 (68%), Positives = 44/61 (72%)
Frame = +3 / -2
Query: 732 LLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVAL 911
L F H I *H PQPLPSL G LPQ+VM NGY LNP APPLS GPAP+GAPYQVA
Sbjct: 474 LCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GPAPLGAPYQVAR 295
Query: 912 A 914
A
Sbjct: 294 A 292
Score = 53.8 bits (111), Expect(2) = 1e-031
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -2 / +1
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQ 732
+RVQ +PVPV HD+L Q A +QGRQGLR ML D V E Q
Sbjct: 352 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQ 474
>gb|AV923254.1|AV923254 AV923254 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12g18 5', mRNA sequence
Length = 616
Score = 160 bits (343), Expect(2) = 7e-074
Identities = 58/77 (75%), Positives = 66/77 (85%)
Frame = -3 / +1
Query: 973 NATTASQDRSLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNE 794
+A + + S +SYSS WLPA+ATWYGAP GAGP DNGGACGFK NQYPFSSMTSCG++
Sbjct: 160 SAAAVNLNTSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGSQ 339
Query: 793 PIFKDGKGCGSCYQIRC 743
P+FKDGKGCGSCYQIRC
Sbjct: 340 PLFKDGKGCGSCYQIRC 390
Score = 138 bits (296), Expect(2) = 7e-074
Identities = 54/73 (73%), Positives = 63/73 (86%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
S +CSG +TV+ITDMNYYPVA+YHFDLSGTAFG++A GLN+KLRH+GIID+QFRRV
Sbjct: 391 SGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFRRV 570
Query: 556 PCNFPGLTITFRV 518
PCNFPGL I F V
Sbjct: 571 PCNFPGLKINFHV 609
Score = 123 bits (264), Expect(2) = 1e-053
Identities = 53/94 (56%), Positives = 61/94 (64%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EPQPLPSL G LPQ+VM+E GYW L P APPLS+GPAP+GAPYQVALAGS
Sbjct: 389 HRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQAPPLSSGPAPLGAPYQVALAGSH 210
Query: 924 PLL*DNKDLSCEAVVALRLSCCSARAPEVTTTTE 1025
L*D ++ A ++ A T TE
Sbjct: 209 AEL*DTAEVLRFTAAAEETYAAASTAASATALTE 108
Score = 107 bits (229), Expect(2) = 6e-037
Identities = 45/73 (61%), Positives = 52/73 (71%)
Frame = -2 / +3
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGD H HELLPG VPL PERHG+R GQ+GP+R+AP HRH VQ G
Sbjct: 390 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 569
Query: 557 AVQLPGPDHHLPR 519
AVQLP P LPR
Sbjct: 570 AVQLPRPQDQLPR 608
Score = 107 bits (228), Expect(2) = 1e-053
Identities = 48/68 (70%), Positives = 53/68 (77%)
Frame = +3 / -3
Query: 519 TRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMI 698
T K+++RPGKLHGT LN MSM+P RS S RP LA P AVPLRSKWY ATG**FMSV+I
Sbjct: 608 TWKLILRPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVII 429
Query: 699 TV*ATPEQ 722
TV PEQ
Sbjct: 428 TVSMLPEQ 405
Score = 67.0 bits (140), Expect(2) = 6e-037
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = -2 / +3
Query: 938 VLQQWLAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLM 759
VLQ +A GQ LV R +R+Q +PVP+L+HD+L Q A +QGRQGLRL+
Sbjct: 195 VLQLRVAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLL 374
Query: 758 LPDTV 744
LPDT+
Sbjct: 375 LPDTM 389
>gb|BM097618.2|BM097618 EBem04_SQ002_D15_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_D15 5', mRNA sequence
Length = 477
Score = 205 bits (442), Expect(3) = 9e-074
Identities = 78/101 (77%), Positives = 92/101 (91%)
Frame = -3 / +3
Query: 730 HPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPC 551
H ACSGV +TVIITDMNYYPV++YHFDLSGTAFG+MA +G ND+LRHAGIIDMQF+RVPC
Sbjct: 54 HRACSGVPETVIITDMNYYPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIIDMQFKRVPC 233
Query: 550 NFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQS 428
+PGLT+TFRVQHGSNP YLA+L+E+E+ DGDV Q DIM+S
Sbjct: 234 QYPGLTVTFRVQHGSNPNYLAILVEYEDGDGDVAQVDIMES 356
Score = 139 bits (298), Expect(3) = 5e-043
Identities = 66/99 (66%), Positives = 70/99 (70%)
Frame = +3 / -3
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
+MS C TSPS S S AR +GL+PC TR V V PG HGT LNCMSM+PA RS S RP
Sbjct: 349 IMSTCATSPSPSSYSTRIAR*LGLDPCCTRNVTVSPGYWHGTLLNCMSMMPAWRSSSLRP 170
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGW 731
LAM P AVPLRSK TG**FMSVMITV TPEQA W
Sbjct: 169 YLAMAPKAVPLRSK**RETG**FMSVMITVSGTPEQARW 53
Score = 115 bits (245), Expect = 6e-025
Identities = 46/80 (57%), Positives = 57/80 (71%)
Frame = -2 / +2
Query: 731 PPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAV 552
P LLRR +GDHHGHELLPG + P+RH +R HGQ+ P+R+AP R HRHAVQ GAV
Sbjct: 53 PSCLLRRPGNGDHHGHELLPGLPLSF*PQRHRLRCHGQVRPQRRAPPRWHHRHAVQEGAV 232
Query: 551 QLPGPDHHLPRPARLQPHVP 492
+PG +PR AR+QP +P
Sbjct: 233 PVPGAHGDVPRAARVQPQLP 292
Score = 67.0 bits (140), Expect(3) = 9e-074
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = -3 / +3
Query: 424 SGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
+G+W PM ESWGSIWR+D RPL+GPFS+R+T+
Sbjct: 378 TGYWTPMRESWGSIWRLDRLRPLQGPFSLRVTD 476
Score = 44.6 bits (91), Expect(3) = 9e-074
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = -3 / +2
Query: 793 PIFKDGKGCGSCYQIR 746
P+FKDGKGCGSCYQ+R
Sbjct: 2 PLFKDGKGCGSCYQVR 49
Score = 38.2 bits (77), Expect(3) = 5e-043
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +3 / -3
Query: 330 VMRMEKGPRSGRLGSILQMEPQDSCMGSQWP 422
V R E GP SGR S QM+P DS +G Q+P
Sbjct: 472 VTRSENGPCSGRSLSRRQMDPHDSLIGVQYP 380
Score = 35.9 bits (72), Expect(3) = 5e-043
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 747 RIW*HEPQPLPSLKMG 794
R W*HEP PLPSLK G
Sbjct: 48 RTW*HEPHPLPSLKSG 1
>gb|BI959771.1|BI959771 HVSMEn0021G03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021G03f, mRNA sequence
Length = 682
Score = 150 bits (323), Expect(3) = 2e-073
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 147 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 326
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 327 GSCYQIRC 350
Score = 131 bits (281), Expect(3) = 2e-073
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 351 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 530
Query: 556 PCNFPGL 536
PC FPGL
Sbjct: 531 PCEFPGL 551
Score = 128 bits (274), Expect(3) = 5e-060
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -1
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 349 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 170
Score = 111 bits (236), Expect(3) = 5e-060
Identities = 50/69 (72%), Positives = 52/69 (75%)
Frame = +3 / -1
Query: 537 RPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATP 716
RPG HGT LN MSM+P CRS S RP LAM PNAVPLRSKWYLATG**FMSVM TV P
Sbjct: 550 RPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLP 371
Query: 717 EQAGWLLFR 743
EQ L+ R
Sbjct: 370 EQDWSLVHR 344
Score = 101 bits (215), Expect(2) = 1e-041
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 353 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 532
Query: 554 VQLP 543
V++P
Sbjct: 533 VRVP 544
Score = 89.0 bits (188), Expect(2) = 1e-041
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 170 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 349
Score = 62.5 bits (130), Expect(3) = 2e-022
Identities = 23/31 (74%), Positives = 23/31 (74%)
Frame = +1 / -2
Query: 745 TVSGSMSRNPCRP*RWARCHRTSWTRTGTGW 837
TVSGS SR PC P*RWARC SW R GTGW
Sbjct: 348 TVSGSRSRIPCHP*RWARCRTMSWRRRGTGW 256
Score = 54.7 bits (113), Expect(3) = 2e-022
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = +2 / -3
Query: 542 REVARHPPELHVDDPGVPELVVQAPAGHGPERRAAQ 649
RE+ARH EL VDD GVPEL+ +A GHG ER A Q
Sbjct: 545 RELARHSLELDVDDAGVPELLAEAGLGHGAERGATQ 438
Score = 33.1 bits (66), Expect(3) = 2e-073
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / +2
Query: 544 PGLTITFRVQHGSNPMYLAVLIE 476
P +TF V+ GSNP+Y AVL E
Sbjct: 542 PWSKVTFHVEQGSNPVYFAVLGE 610
Score = 31.3 bits (62), Expect(3) = 5e-060
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 477 SMSTARYMGLEPCWTRKVMVRPG 545
S STA+Y GL+PC T KV + G
Sbjct: 609 SPSTAKYTGLDPCSTWKVTLDQG 541
Score = 26.7 bits (52), Expect(3) = 2e-022
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 482 EHGQVHGVGAVLDAEG 529
+HG+VH VG +L EG
Sbjct: 604 QHGEVHRVGPLLHVEG 557
>gb|BQ765573.1|BQ765573 EBro03_SQ007_F17_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ007_F17 5', mRNA sequence
Length = 620
Score = 217 bits (469), Expect(3) = 1e-072
Identities = 79/107 (73%), Positives = 91/107 (85%)
Frame = -3 / +1
Query: 937 SYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSC 758
SY+SGWLPAKATWYGAPTGAGP+DNGGACGFK N+YPFSSMTSCGNEP+F G GCGSC
Sbjct: 181 SYNSGWLPAKATWYGAPTGAGPMDNGGACGFKNVNKYPFSSMTSCGNEPLFDGGAGCGSC 360
Query: 757 YQIRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMAS 617
Y+IRC+ +N+P+CSG +TV+ITDMNYYPVA+YHFDL G S
Sbjct: 361 YEIRCVAANNPSCSGQPRTVVITDMNYYPVARYHFDLRAPRSGPWPS 501
Score = 161 bits (346), Expect(4) = 6e-058
Identities = 74/107 (69%), Positives = 77/107 (71%)
Frame = +3 / -1
Query: 618 LAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGS 797
L P LRSKWYLATG**FMSV+ TV PEQ G L HRI *HEPQP P K GS
Sbjct: 500 LGHGPERGALRSKWYLATG**FMSVITTVRGWPEQEGLLAATHRIS*HEPQPAPPSKRGS 321
Query: 798 LPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQPLL*D 938
LPQ+VM+E GY L P APPLS GPAPVGAPYQVALAGSQP L*D
Sbjct: 320 LPQEVMEEKGYLFTFLKPQAPPLSMGPAPVGAPYQVALAGSQPEL*D 180
Score = 93.2 bits (197), Expect(3) = 2e-039
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = -2 / +3
Query: 857 CVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHEL 678
C+R+Q + VP+L+HD+L QRA L+ R+ LRLML D + Q P LLR +DG H HEL
Sbjct: 261 CLRLQEREQVPLLLHDLLRQRASLRRRRRLRLMLRDPMRGRQQPFLLRPAADGGDHRHEL 440
Query: 677 LPGGQVPLRPE 645
LP GQVPLRP+
Sbjct: 441 LPRGQVPLRPQ 473
Score = 65.2 bits (136), Expect(3) = 2e-039
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = -3 / +3
Query: 643 GTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPG 539
GTAFG+MA +GLNDKLRHAGIIDMQFR PG
Sbjct: 474 GTAFGAMAKYGLNDKLRHAGIIDMQFREGALQLPG 578
Score = 57.4 bits (119), Expect(4) = 6e-058
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = +3 / -2
Query: 540 PGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVP 644
PG LNCMSM+PA RSLS RP LAM PNAVP
Sbjct: 577 PGSCSAPSLNCMSMMPAWRSLSLRPYLAMAPNAVP 473
Score = 52.4 bits (108), Expect(3) = 1e-072
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = -2 / +2
Query: 641 HGVRVHGQLGPERQAPARRDHRHAVQAG 558
H VR HGQ+ P+RQAP RR HRHAVQ G
Sbjct: 476 HRVRGHGQVRPQRQAPPRRHHRHAVQGG 559
Score = 43.2 bits (88), Expect(3) = 1e-072
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / +1
Query: 562 RVPCNFPGLTITFRVQHGSNP 500
RV CNFPG+ +TF VQ GSNP
Sbjct: 556 RVRCNFPGMKVTFHVQRGSNP 618
Score = 42.8 bits (87), Expect(3) = 2e-039
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -2 / +3
Query: 560 GAVQLPGPDHHLPRPARLQP 501
GA+QLPG + HLPRPARLQP
Sbjct: 558 GALQLPGHEGHLPRPARLQP 617
Score = 39.6 bits (80), Expect(4) = 6e-058
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2 / -3
Query: 503 VGAVLDAEGDGQAREVARHPP 565
VGA LD EGD AREVA HPP
Sbjct: 615 VGAALDVEGDLHAREVAAHPP 553
Score = 23.5 bits (45), Expect(4) = 6e-058
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2 / -3
Query: 1007 GDDDHGEERGQCQGLEG 1057
G D+HGEE+ C G
Sbjct: 141 GRDEHGEEQCHCHNGNG 91
>gb|BF254126.2|BF254126 HVSMEf0003B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003B13f, mRNA sequence
Length = 789
Score = 180 bits (388), Expect(3) = 2e-072
Identities = 70/106 (66%), Positives = 85/106 (80%)
Frame = -3 / +2
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+ H ACSG +TV+ITDMNYYPVA YHFDLSGTAFG +A G ND+LRHAGIID+QF RV
Sbjct: 143 TKHKACSGRQETVMITDMNYYPVAPYHFDLSGTAFGKLAKPGRNDELRHAGIIDIQFTRV 322
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSG 419
C FPGL + F V+ GSN +Y+A+L+E+EN DGDVVQ D+M+S G
Sbjct: 323 ACEFPGLKVGFHVEEGSNAVYMAILVEYENGDGDVVQVDLMESGRG 460
Score = 118 bits (253), Expect(3) = 8e-049
Identities = 58/97 (59%), Positives = 62/97 (63%)
Frame = +3 / -1
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRP 614
M S CTTSPS FS S A Y L+P T PG H T +N MSM+PACRS S RP
Sbjct: 444 MRSTCTTSPSPFSYSTRIAMYTALDPSSTWNPTFSPGNSHATLVNWMSMMPACRSSSLRP 265
Query: 615 QLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQA 725
LA P AVPLRSKW ATG**FMSV+ITV PE A
Sbjct: 264 GLASLPKAVPLRSKW*GATG**FMSVIITVSCRPEHA 154
Score = 106 bits (227), Expect(3) = 2e-072
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -3 / +2
Query: 883 GAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLK 737
GA P DNGGACGFK N+YPF +MTSCGN+P+FKDGKGCG+CY+I+C K
Sbjct: 2 GARPYDNGGACGFKNVNRYPFMAMTSCGNQPLFKDGKGCGACYKIKCTK 148
Score = 103 bits (219), Expect(3) = 8e-049
Identities = 40/74 (54%), Positives = 51/74 (68%)
Frame = -2 / +1
Query: 725 GLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAVQL 546
G+LR DGD HGHELLPGG +PLRP+RH +R Q P+R+AP RR HRH V G V++
Sbjct: 154 GVLRAAGDGDDHGHELLPGGALPLRPQRHRLRQARQARPQRRAPTRRHHRHPVHQGGVRV 333
Query: 545 PGPDHHLPRPARLQ 504
PG + +PR +Q
Sbjct: 334 PGAEGGVPRGGGVQ 375
Score = 76.2 bits (160), Expect(3) = 8e-049
Identities = 32/68 (47%), Positives = 43/68 (63%)
Frame = -3 / +2
Query: 457 DVVQADIMQSNSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITNESGRQLVAKNVIPANY 278
D++++ + G W M ESWG IWR+D N L+ PFS+RI NESG+ LVA+ VIP
Sbjct: 437 DLMESGRGRRGGGRWTRMRESWGFIWRLDSNHRLQAPFSIRIRNESGQTLVAR*VIPKKG 616
Query: 277 IPDVDYRS 254
P+ Y S
Sbjct: 617 RPNTLYCS 640
Score = 72.1 bits (151), Expect(3) = 8e-049
Identities = 33/51 (64%), Positives = 34/51 (66%)
Frame = +3 / -1
Query: 732 LLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAP 884
L F H I *H PQPLPSL G LPQ+VM NGY LNP APPLS G AP
Sbjct: 153 LCFVHLIL*HAPQPLPSLNSGWLPQEVMAMNGYRFTFLNPQAPPLS*GRAP 1
Score = 53.8 bits (111), Expect(3) = 8e-049
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -2 / +1
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQ 732
+RVQ +PVPV HD+L Q A +QGRQGLR ML D V E Q
Sbjct: 31 LRVQEREPVPVHGHDLLRQPAAVQGRQGLRRMLQDQVHEAQ 153
Score = 42.3 bits (86), Expect(3) = 8e-049
Identities = 23/43 (53%), Positives = 24/43 (55%)
Frame = +3 / -1
Query: 273 GM*LAGMTFLATSCLPDSLVMRMEKGPRSGRLGSILQMEPQDS 401
G+ GMT ATS PDSL MRME G L S QM P DS
Sbjct: 621 GLPFLGMT*RATSVCPDSLRMRMENGACRRWLESRRQMNPHDS 493
Score = 24.9 bits (48), Expect(3) = 2e-072
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1 / +3
Query: 414 GSPCTSPGAPSGGSTPT 364
G C S G SG STPT
Sbjct: 480 GRGCASRGDSSGASTPT 530
>gb|BI960089.1|BI960089 HVSMEn0023C15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023C15f, mRNA sequence
Length = 646
Score = 146 bits (314), Expect(2) = 2e-072
Identities = 58/81 (71%), Positives = 67/81 (82%)
Frame = -3 / +2
Query: 724 ACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNF 545
+CSG +TVIITDMNYYPVA YHFDLSGTAFG +A GLND+LRH+GIID++F RVPC F
Sbjct: 404 SCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEF 583
Query: 544 PGLTITFRVQHGSNPMYLAVL 482
PGL I F V+ SNP+Y AVL
Sbjct: 584 PGLKIGFHVEEYSNPVYFAVL 646
Score = 146 bits (314), Expect(2) = 2e-072
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = -3 / +2
Query: 934 YSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCY 755
Y W PA+ATWYG P GAGP DNGGACGFK TNQYPF+SMTSCGN+P+FKDGKGCGSCY
Sbjct: 200 YWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFKDGKGCGSCY 379
Query: 754 QIRCLK 737
+IRC K
Sbjct: 380 KIRCRK 397
Score = 111 bits (237), Expect(2) = 1e-047
Identities = 46/62 (74%), Positives = 49/62 (79%)
Frame = +3 / -2
Query: 738 FRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAG 917
F H I *HEP PLPSL G LPQ+VMD NGYWLV L P APPLS+GPAP+G PYQVALAG
Sbjct: 396 FLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPPLSSGPAPLGWPYQVALAG 217
Query: 918 SQ 923
Q
Sbjct: 216 VQ 211
Score = 105 bits (225), Expect(2) = 1e-038
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = -2 / +1
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGDH+ HELLPGG +PLRP+RHGVR + +RQAP R HRH V G
Sbjct: 391 QEGPILLRQDGDGDHYRHELLPGGALPLRPQRHGVRQARKARAQRQAPPLRHHRHRVHTG 570
Query: 557 AVQLPGPDHHLPRPARLQPHV 495
AV++PG +PR L+P +
Sbjct: 571 AVRVPGAQDRVPRGGVLEPRL 633
Score = 99.1 bits (210), Expect(2) = 1e-047
Identities = 49/80 (61%), Positives = 54/80 (67%)
Frame = +3 / -2
Query: 483 STARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWY 662
STA+ G E T ++ PG HGTR+N MSM+P RSLS P A PNAVPLRSKW
Sbjct: 645 STAK*TGFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW* 466
Query: 663 LATG**FMSVMITV*ATPEQ 722
ATG**FMSVMITV PEQ
Sbjct: 465 GATG**FMSVMITVSVLPEQ 406
Score = 74.4 bits (156), Expect(2) = 1e-038
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = -2 / +1
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L GQG LV RWC+R+Q HQPVPV VHD+L Q A +QGRQG+RLML D +
Sbjct: 211 LDPGQGDLVWPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQM 390
Query: 743 PE 738
E
Sbjct: 391 QE 396
>gb|CA022237.1|CA022237 HZ42I19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42I19
5-PRIME, mRNA sequence
Length = 539
Score = 162 bits (348), Expect(2) = 3e-072
Identities = 59/77 (76%), Positives = 66/77 (85%)
Frame = -3 / +1
Query: 973 NATTASQDRSLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNE 794
+A + + S +SYSS WLPA+ATWYGAP GAGP DNGGACGFK NQYPFSSMTSCGN+
Sbjct: 109 SAAAVNLNTSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQ 288
Query: 793 PIFKDGKGCGSCYQIRC 743
P+FKDGKGCGSCYQIRC
Sbjct: 289 PLFKDGKGCGSCYQIRC 339
Score = 130 bits (279), Expect(2) = 3e-072
Identities = 50/66 (75%), Positives = 59/66 (89%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
S +CSG +TV+ITDMNYYPVA+YHFDLSGTAFG++A GLN+KLRH+GIID+QFRRV
Sbjct: 340 SGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFRRV 519
Query: 556 PCNFPG 539
PCNFPG
Sbjct: 520 PCNFPG 537
Score = 123 bits (264), Expect(2) = 2e-052
Identities = 53/94 (56%), Positives = 61/94 (64%)
Frame = +3 / -1
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EPQPLPSL G LPQ+VM+E GYW L P APPLS+GPAP+GAPYQVALAGS
Sbjct: 338 HRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQAPPLSSGPAPLGAPYQVALAGSH 159
Query: 924 PLL*DNKDLSCEAVVALRLSCCSARAPEVTTTTE 1025
L*D ++ A ++ A T TE
Sbjct: 158 AEL*DTAEVLRFTAAAEETYAAASTAASATALTE 57
Score = 102 bits (218), Expect(2) = 2e-052
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +3 / -1
Query: 537 RPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATP 716
RPGKLHGT LN MSM+P RS S RP LA P AVPLRSKWY ATG**FMSV+ITV P
Sbjct: 539 RPGKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLP 360
Query: 717 EQ 722
EQ
Sbjct: 359 EQ 354
Score = 100 bits (214), Expect(2) = 7e-035
Identities = 42/67 (62%), Positives = 49/67 (73%)
Frame = -2 / +3
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGD H HELLPG VPL PERHG+R GQ+GP+R+AP HRH VQ G
Sbjct: 339 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 518
Query: 557 AVQLPGP 537
AVQLP P
Sbjct: 519 AVQLPRP 539
Score = 67.0 bits (140), Expect(2) = 7e-035
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = -2 / +3
Query: 938 VLQQWLAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLM 759
VLQ +A GQ LV R +R+Q +PVP+L+HD+L Q A +QGRQGLRL+
Sbjct: 144 VLQLRVAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLL 323
Query: 758 LPDTV 744
LPDT+
Sbjct: 324 LPDTM 338
>gb|BU981754.1|BU981754 HA24I17r HA Hordeum vulgare subsp. vulgare cDNA clone HA24I17
5-PRIME, mRNA sequence
Length = 495
Score = 271 bits (587), Expect = 4e-072
Identities = 102/129 (79%), Positives = 115/129 (89%)
Frame = -3 / +1
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+S WL AKATWYG PTGAGP DNGGACGFK N PFSSMTSCGN+P+FKDGKGCGSCYQ
Sbjct: 109 NSSWLDAKATWYGRPTGAGPDDNGGACGFKNVNLPPFSSMTSCGNQPLFKDGKGCGSCYQ 288
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRCL S+HPACSGV +TVIITDMNY PV++YHFDLSGTAFG+MA +G ND+LRHAGII+M
Sbjct: 289 IRCLNSDHPACSGVPKTVIITDMNYDPVSRYHFDLSGTAFGAMAKYGRNDELRHAGIINM 468
Query: 571 QFRRVPCNF 545
QF+RVPC +
Sbjct: 469 QFKRVPCQY 495
Score = 204 bits (439), Expect = 1e-051
Identities = 89/124 (71%), Positives = 95/124 (76%)
Frame = +3 / -2
Query: 552 HGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGW 731
HGT LNCM ++PA RS S RP LAM P AVPLRSKW TG *FMSVMITV TPE AGW
Sbjct: 488 HGTLLNCMLIMPAWRSSSLRPYLAMAPKAVPLRSKW*RETGS*FMSVMITVFGTPEHAGW 309
Query: 732 LLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVAL 911
F+H IW* EPQPLPSLK G LPQ+VM+E G L LNPHAPPLS+GPAPVG PY VAL
Sbjct: 308 SEFKHLIW*QEPQPLPSLKSGWLPQEVMEEKGGKLTFLNPHAPPLSSGPAPVGLPYHVAL 129
Query: 912 AGSQ 923
A SQ
Sbjct: 128 ASSQ 117
Score = 127 bits (273), Expect = 8e-029
Identities = 56/101 (55%), Positives = 71/101 (70%)
Frame = -2 / +3
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTVPEEQPPGLLRRGSDGDHHGHELL 675
VRVQ Q +L+HD+L Q LQGRQGLRL+LPD V + PP +LR DGDH+ HEL
Sbjct: 186 VRVQERQLATLLLHDLLRQPTALQGRQGLRLLLPDKVLKLGPPCVLRCAEDGDHNRHELR 365
Query: 674 PGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGAV 552
P +PLRP+ H +R HGQ+ +R+AP RR ++HAVQ GAV
Sbjct: 366 PSLPLPLRPQWHRLRSHGQVRTQRRAPPRRHYQHAVQEGAV 488
>gb|BG365461.2|BG365461 HVSMEi0002M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002M09f, mRNA sequence
Length = 754
Score = 150 bits (323), Expect(3) = 7e-072
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 168 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 347
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 348 GSCYQIRC 371
Score = 131 bits (281), Expect(3) = 7e-072
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 372 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 551
Query: 556 PCNFPGL 536
PC FPGL
Sbjct: 552 PCEFPGL 572
Score = 128 bits (274), Expect(2) = 1e-055
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -1
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 370 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 191
Score = 109 bits (232), Expect(2) = 1e-055
Identities = 50/74 (67%), Positives = 54/74 (72%)
Frame = +3 / -1
Query: 522 RKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMIT 701
R+ + PG HGT LN MSM+P CRS S RP LAM PNAVPLRSKWYLATG**FMSVM T
Sbjct: 586 REGHLSPGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTT 407
Query: 702 V*ATPEQAGWLLFR 743
V PEQ L+ R
Sbjct: 406 VSGLPEQDWSLVHR 365
Score = 101 bits (215), Expect(3) = 7e-043
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 374 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 553
Query: 554 VQLP 543
V++P
Sbjct: 554 VRVP 565
Score = 89.0 bits (188), Expect(3) = 7e-043
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 191 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 370
Score = 28.1 bits (55), Expect(3) = 7e-072
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3 / +3
Query: 511 GSNPMYLAVLIEHENKDGDVVQADIMQSNSGHWEPMHESWGSIWRID 371
G P L ++DGDVV +++NS P +S GSI R D
Sbjct: 594 GVEPSVLHPAGGFHDRDGDVVPVGPIEANSVT*PPKPKSVGSIGRRD 734
Score = 22.6 bits (43), Expect(3) = 7e-043
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -3 / +1
Query: 520 VQHGSNPMYLAVLIE 476
V+ GSNP+Y L++
Sbjct: 586 VEQGSNPVYFTRLVD 630
>gb|CK125696.1|CK125696 BES1824110b08 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B0810 5-PRIME, mRNA sequence
Length = 638
Score = 146 bits (314), Expect(3) = 7e-072
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = -3 / +3
Query: 934 YSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCY 755
Y W PA+ATWYG P GAGP DNGGACGFK TNQYPF+SMTSCGN+P+FKDGKGCGSCY
Sbjct: 132 YWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFKDGKGCGSCY 311
Query: 754 QIRCLK 737
+IRC K
Sbjct: 312 KIRCRK 329
Score = 111 bits (237), Expect(3) = 2e-048
Identities = 46/62 (74%), Positives = 49/62 (79%)
Frame = +3 / -2
Query: 738 FRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAG 917
F H I *HEP PLPSL G LPQ+VMD NGYWLV L P APPLS+GPAP+G PYQVALAG
Sbjct: 328 FLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPPLSSGPAPLGWPYQVALAG 149
Query: 918 SQ 923
Q
Sbjct: 148 VQ 143
Score = 108 bits (231), Expect(3) = 7e-072
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = -3 / +3
Query: 724 ACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNF 545
+CSG +TVIITDMNYYPVA YHFDLSGTAFG +A GLND+LRH+GIID++F R
Sbjct: 336 SCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRGAVGV 515
Query: 544 PG 539
PG
Sbjct: 516 PG 521
Score = 86.3 bits (182), Expect(3) = 3e-034
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = -2 / +2
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGDHH HELLPGG +PLRP+RH VR + +RQAP R HRH V G
Sbjct: 323 QEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSVRQARKARAQRQAPPLRHHRHRVHTG 502
Score = 81.3 bits (171), Expect(3) = 2e-048
Identities = 40/61 (65%), Positives = 42/61 (68%)
Frame = +3 / -2
Query: 540 PGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPE 719
PG R+N MSM+P RSLS P A PNAVPLRSKW ATG**FMSVMITV PE
Sbjct: 520 PGTPTAPRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG**FMSVMITVSVLPE 341
Query: 720 Q 722
Q
Sbjct: 340 Q 338
Score = 74.8 bits (157), Expect(3) = 3e-034
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L GQG LV RWC+R+Q HQPVPV VHD+L Q A +QGRQG+RLML D +
Sbjct: 143 LDPGQGDLVRPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQM 322
Query: 743 PE 738
E
Sbjct: 323 QE 328
Score = 55.1 bits (114), Expect(3) = 7e-072
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -3 / +1
Query: 559 VPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQS 428
VP FPGL I F V S P+Y AVL+ ++ DGDVVQ +M+S
Sbjct: 502 VPWEFPGLKIGFHVXEYSXPVYFAVLVXXQDGDGDVVQVXLMES 633
Score = 39.1 bits (79), Expect(3) = 2e-048
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3 / -1
Query: 435 MMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGT 560
M CTTSPS S STA+ G E T ++ PG HGT
Sbjct: 626 MRXTCTTSPSPSXXSTSTAK*TGXEYSXTWNPILSPGNSHGT 501
Score = 22.6 bits (43), Expect(3) = 3e-034
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2 / +3
Query: 560 GAVQLPGPDHHLPRPARLQPHV 495
GAV +PG +PR L P +
Sbjct: 501 GAVGVPGAQDRVPRGGVLXPRL 566
>gb|BI956858.1|BI956858 HVSMEn0005K24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005K24f, mRNA sequence
Length = 812
Score = 118 bits (252), Expect(5) = 1e-071
Identities = 46/59 (77%), Positives = 52/59 (88%)
Frame = -3 / +1
Query: 730 HPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVP 554
H CSGV +TVIITDMNYYPV++YHFDLSGTAFG+MA G ND+LRHAGIIDMQF+R P
Sbjct: 220 HATCSGVPETVIITDMNYYPVSRYHFDLSGTAFGAMAKDGQNDELRHAGIIDMQFKRSP 396
Score = 104 bits (222), Expect(5) = 1e-071
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -3 / +2
Query: 925 GWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDG 776
GWL A+ATWYGAP GAGP DNGGACGFK N PF++MTSCGNEP+FK G
Sbjct: 32 GWLNARATWYGAPGGAGPDDNGGACGFKNVNLPPFNAMTSCGNEPLFKGG 181
Score = 91.8 bits (194), Expect(3) = 1e-024
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = -2 / +3
Query: 722 LLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQ 564
LLRR DGDHH HELLPG +PLRP+RH +R HGQ P+R+AP RR HRHAVQ
Sbjct: 228 LLRRP*DGDHHRHELLPGVPLPLRPQRHRLRRHGQGRPKRRAPPRRHHRHAVQ 386
Score = 89.5 bits (189), Expect(4) = 3e-043
Identities = 42/56 (75%), Positives = 43/56 (76%)
Frame = +3 / -1
Query: 555 GTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQ 722
G LNCMSM+PA RS SF P LAM P AVPLRSKW TG**FMSVMITV TPEQ
Sbjct: 395 GDLLNCMSMMPAWRSSSFWPSLAMAPKAVPLRSKW*RDTG**FMSVMITVSGTPEQ 228
Score = 82.2 bits (173), Expect(4) = 3e-043
Identities = 36/50 (72%), Positives = 37/50 (74%)
Frame = +3 / -3
Query: 777 PSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQP 926
P LK GSLP DVM NG LNPHAPPLS+GPAP GAPYQVALA S P
Sbjct: 180 PPLKSGSLPHDVMALNGGRFTFLNPHAPPLSSGPAPPGAPYQVALALSHP 31
Score = 68.4 bits (143), Expect(5) = 1e-071
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = -3 / +3
Query: 562 RVPCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSGHWEP 407
RVPC +PGL++TF V+ GSNP YLA+ +E+ N DGDV + +G W P
Sbjct: 525 RVPCQYPGLSVTFHVEQGSNPNYLAIPVEYGNGDGDVGASGPHGVRAGKW*P 680
Score = 39.6 bits (80), Expect(3) = 1e-024
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -2 / +1
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQG 771
+A QGHLV W +RVQ +P V HDV+ Q A LQG G
Sbjct: 34 VAQRQGHLVRRSRRRRA*RQWWRMRVQEREPAAVQRHDVVRQ*AALQGGXG 186
Score = 38.6 bits (78), Expect(4) = 3e-043
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +3 / -2
Query: 453 TSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGT 560
TSPS F S AR G +PC T V PG HGT
Sbjct: 634 TSPSPFPYSTGIAR*FGFDPCSTWNVTDNPGYWHGT 527
Score = 35.0 bits (70), Expect(5) = 1e-071
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3 / +1
Query: 778 GKGCGSCYQIRCL 740
G GCGSCYQIRC+
Sbjct: 178 GXGCGSCYQIRCV 216
Score = 27.6 bits (54), Expect(4) = 3e-043
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3 / -1
Query: 744 HRIW*HEPQPLP 779
H IW*HEP P P
Sbjct: 212 HLIW*HEPHPSP 177
Score = 26.3 bits (51), Expect(5) = 1e-071
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3 / +3
Query: 364 RPLRGPFSMRITNESGRQLVA 302
RPL GPF + N SG VA
Sbjct: 738 RPLEGPFXCQWRNNSGGGFVA 800
Score = 24.9 bits (48), Expect(3) = 1e-024
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2 / +2
Query: 560 GAVQLPGPDHHLPRPARLQPHVP 492
GAV +PG +PR A ++P +P
Sbjct: 527 GAVPVPGVVGDVPR*AGVEPELP 595
>gb|CA023986.1|CA023986 HZ48A15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48A15
5-PRIME, mRNA sequence
Length = 584
Score = 162 bits (348), Expect(2) = 2e-071
Identities = 59/77 (76%), Positives = 66/77 (85%)
Frame = -3 / +2
Query: 973 NATTASQDRSLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNE 794
+A + + S +SYSS WLPA+ATWYGAP GAGP DNGGACGFK NQYPFSSMTSCGN+
Sbjct: 158 SAAAVNLNTSAVSYSSAWLPARATWYGAPNGAGPDDNGGACGFKHVNQYPFSSMTSCGNQ 337
Query: 793 PIFKDGKGCGSCYQIRC 743
P+FKDGKGCGSCYQIRC
Sbjct: 338 PLFKDGKGCGSCYQIRC 388
Score = 127 bits (273), Expect(2) = 2e-071
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -3 / +2
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
S +CSG +TV+ITDMNYYPVA+YHFDLSGTAFG++A GLN+KLRH+GIID+QFRRV
Sbjct: 389 SGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTAFGALAKSGLNEKLRHSGIIDIQFRRV 568
Query: 556 PCNFP 542
PCNFP
Sbjct: 569 PCNFP 583
Score = 123 bits (264), Expect(2) = 1e-050
Identities = 53/94 (56%), Positives = 61/94 (64%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EPQPLPSL G LPQ+VM+E GYW L P APPLS+GPAP+GAPYQVALAGS
Sbjct: 387 HRIW*QEPQPLPSLNRGWLPQEVMEEKGYWFTCLKPQAPPLSSGPAPLGAPYQVALAGSH 208
Query: 924 PLL*DNKDLSCEAVVALRLSCCSARAPEVTTTTE 1025
L*D ++ A ++ A T TE
Sbjct: 207 AEL*DTAEVLRFTAAAEETYAAASTAASATALTE 106
Score = 98.7 bits (209), Expect(2) = 3e-034
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = -2 / +1
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGD H HELLPG VPL PERHG+R GQ+GP+R+AP HRH VQ G
Sbjct: 388 QRRPLLLRQHRDGDDHRHELLPGRPVPL*PERHGLRRPGQVGPQREAPPLGHHRHPVQEG 567
Query: 557 AVQLP 543
AVQLP
Sbjct: 568 AVQLP 582
Score = 97.3 bits (206), Expect(2) = 1e-050
Identities = 44/60 (73%), Positives = 46/60 (76%)
Frame = +3 / -3
Query: 543 GKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQ 722
GKLHGT LN MSM+P RS S RP LA P AVPLRSKWY ATG**FMSV+ITV PEQ
Sbjct: 582 GKLHGTLLNWMSMMPEWRSFSLRPDLARAPKAVPLRSKWYWATG**FMSVIITVSMLPEQ 403
Score = 67.0 bits (140), Expect(2) = 3e-034
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = -2 / +1
Query: 938 VLQQWLAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLM 759
VLQ +A GQ LV R +R+Q +PVP+L+HD+L Q A +QGRQGLRL+
Sbjct: 193 VLQLRVAPGQSDLVRSAQRRRARRQRRRLRLQAREPVPLLLHDLLRQPAPVQGRQGLRLL 372
Query: 758 LPDTV 744
LPDT+
Sbjct: 373 LPDTM 387
>gb|BQ764067.1|BQ764067 EBro03_SQ006_N05_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N05 5', mRNA sequence
Length = 625
Score = 267 bits (578), Expect = 7e-071
Identities = 101/127 (79%), Positives = 112/127 (88%)
Frame = -3 / +3
Query: 931 SSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQ 752
+ GWL A+ATWYGAP GAGP+DNGGACGFK N PF++MTSCGNEPIFKDGKGCGSCYQ
Sbjct: 240 TGGWLDARATWYGAPDGAGPLDNGGACGFKNVNLPPFNAMTSCGNEPIFKDGKGCGSCYQ 419
Query: 751 IRCLKSNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDM 572
IRC+ HPACSG +TVIITDMNYYPVA+YHFDLSGTAFG+MA G ND+LRHAGIIDM
Sbjct: 420 IRCVGKVHPACSGDPETVIITDMNYYPVARYHFDLSGTAFGAMAKDGRNDELRHAGIIDM 599
Query: 571 QFRRVPC 551
QF+RVPC
Sbjct: 600 QFKRVPC 620
Score = 199 bits (428), Expect = 3e-050
Identities = 90/125 (72%), Positives = 93/125 (74%)
Frame = +3 / -1
Query: 552 HGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQAGW 731
HGT LNCMSM+PA RS S RP LAM P AVPLRSKW ATG**FMSVMITV +PE AG
Sbjct: 619 HGTLLNCMSMMPAWRSSSLRPSLAMAPKAVPLRSKW*RATG**FMSVMITVSGSPEHAG* 440
Query: 732 LLFRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVAL 911
L H IW* EP PLPSLK+GSLP DVM G LNPHAPPLS GPAP GAPY VAL
Sbjct: 439 TLPTHLIW*QEPHPLPSLKIGSLPHDVMALKGGRFTFLNPHAPPLSNGPAPSGAPYHVAL 260
Query: 912 AGSQP 926
A SQP
Sbjct: 259 ASSQP 245
Score = 164 bits (353), Expect = 8e-040
Identities = 71/124 (57%), Positives = 84/124 (67%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
LA QGH+V RW VRVQ +P + HDV+ QRA LQGRQG+RL+LPD V
Sbjct: 248 LAGRQGHMVRRSGWRRAVGQRWRVRVQEREPAALQRHDVVRQRADLQGRQGMRLLLPDKV 427
Query: 743 PEEQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQ 564
+ P +LRR DGDHH HELLPG +PLRP+RH +R HGQ P+R+AP RR HRHAVQ
Sbjct: 428 RGQGSPSVLRRPRDGDHHRHELLPGRPLPLRPQRHCLRRHGQRRPQRRAPPRRHHRHAVQ 607
Query: 563 AGAV 552
GAV
Sbjct: 608 EGAV 619
>gb|BI957183.1|BI957183 HVSMEn0007P24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007P24f, mRNA sequence
Length = 844
Score = 150 bits (323), Expect(3) = 4e-070
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +1
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 169 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 348
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 349 GSCYQIRC 372
Score = 128 bits (274), Expect(2) = 2e-054
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 371 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 192
Score = 127 bits (273), Expect(3) = 4e-070
Identities = 48/72 (66%), Positives = 61/72 (84%)
Frame = -3 / +1
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +C +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+G+ID+ F+RV
Sbjct: 373 TNDQSCFRNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGLIDIPFKRV 552
Query: 556 PCNFPGLTITFR 521
PC FPGL +TF+
Sbjct: 553 PCEFPGLKVTFQ 588
Score = 105 bits (223), Expect(2) = 2e-054
Identities = 49/73 (67%), Positives = 53/73 (72%)
Frame = +3 / -3
Query: 525 KVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV 704
KV +RPG HGT LN MS+ P CRS S RP LAM PNAVPLRSKWYLATG**FMSVM TV
Sbjct: 584 KVTLRPGNSHGTLLNGMSIKPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTV 405
Query: 705 *ATPEQAGWLLFR 743
+Q L+ R
Sbjct: 404 SGLRKQDWSLVHR 366
Score = 96.4 bits (204), Expect(2) = 5e-040
Identities = 41/71 (57%), Positives = 49/71 (69%)
Frame = -2 / +3
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LL + DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R +RH++Q A
Sbjct: 375 QRPVLLPQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRLNRHSIQESA 554
Query: 554 VQLPGPDHHLP 522
V++P LP
Sbjct: 555 VRVPWSQGDLP 587
Score = 89.0 bits (188), Expect(2) = 5e-040
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +3
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 192 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 371
Score = 25.8 bits (50), Expect(3) = 4e-070
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3 / +2
Query: 409 PMHESWGSIWRIDPNRPLRGPF 344
P +SWG I ++ L+GPF
Sbjct: 698 PFTKSWGIILAVESRPRLQGPF 763
>gb|BM372935.2|BM372935 EBma04_SQ002_H04_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_H04 5', mRNA sequence
Length = 612
Score = 146 bits (314), Expect(2) = 1e-069
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = -3 / +2
Query: 934 YSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCY 755
Y W PA+ATWYG P GAGP DNGGACGFK TNQYPF+SMTSCGN+P+FKDGKGCGSCY
Sbjct: 182 YWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCGNQPLFKDGKGCGSCY 361
Query: 754 QIRCLK 737
+IRC K
Sbjct: 362 KIRCRK 379
Score = 137 bits (294), Expect(2) = 1e-069
Identities = 54/75 (72%), Positives = 62/75 (82%)
Frame = -3 / +2
Query: 724 ACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNF 545
+CSG +TVIITDMNYYPVA YHFDLSGTAFG +A GLND+LRH+GIID++F RVPC F
Sbjct: 386 SCSGRTETVIITDMNYYPVAPYHFDLSGTAFGRLAKPGLNDRLRHSGIIDIEFTRVPCEF 565
Query: 544 PGLTITFRVQHGSNP 500
PGL I F V+ SNP
Sbjct: 566 PGLKIGFHVEEYSNP 610
Score = 111 bits (237), Expect(2) = 3e-046
Identities = 46/62 (74%), Positives = 49/62 (79%)
Frame = +3 / -1
Query: 738 FRHRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAG 917
F H I *HEP PLPSL G LPQ+VMD NGYWLV L P APPLS+GPAP+G PYQVALAG
Sbjct: 378 FLHLIL*HEPHPLPSLNNGWLPQEVMDANGYWLVCLKPQAPPLSSGPAPLGWPYQVALAG 199
Query: 918 SQ 923
Q
Sbjct: 198 VQ 193
Score = 105 bits (224), Expect(2) = 1e-038
Identities = 42/79 (53%), Positives = 53/79 (67%)
Frame = -2 / +1
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ DGDHH HELLPGG +PLRP+RH VR + +RQAP R HRH V G
Sbjct: 373 QEGPILLRQDGDGDHHRHELLPGGALPLRPQRHSVRQARKARAQRQAPPLRHHRHRVHTG 552
Query: 557 AVQLPGPDHHLPRPARLQP 501
AV++PG +PR L+P
Sbjct: 553 AVRVPGAQDRVPRGGVLEP 609
Score = 94.5 bits (200), Expect(2) = 3e-046
Identities = 46/74 (62%), Positives = 50/74 (67%)
Frame = +3 / -1
Query: 501 GLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG** 680
G E T ++ PG HGTR+N MSM+P RSLS P A PNAVPLRSKW ATG**
Sbjct: 609 GFEYSSTWNPILSPGNSHGTRVNSMSMMPEWRSLSLSPGFASLPNAVPLRSKW*GATG** 430
Query: 681 FMSVMITV*ATPEQ 722
FMSVMITV PEQ
Sbjct: 429 FMSVMITVSVLPEQ 388
Score = 74.8 bits (157), Expect(2) = 1e-038
Identities = 34/62 (54%), Positives = 40/62 (64%)
Frame = -2 / +1
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L GQG LV RWC+R+Q HQPVPV VHD+L Q A +QGRQG+RLML D +
Sbjct: 193 LDPGQGDLVRPAQWRRPRRQRWCLRLQAHQPVPVRVHDLLRQPAIVQGRQGMRLMLQDQM 372
Query: 743 PE 738
E
Sbjct: 373 QE 378
>gb|BG369408.2|BG369408 HVSMEi0024E17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0024E17f, mRNA sequence
Length = 875
Score = 150 bits (323), Expect(2) = 4e-069
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 156 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 335
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 336 GSCYQIRC 359
Score = 131 bits (281), Expect(2) = 4e-069
Identities = 50/67 (74%), Positives = 60/67 (89%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 360 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 539
Query: 556 PCNFPGL 536
PC FPGL
Sbjct: 540 PCEFPGL 560
Score = 128 bits (274), Expect(3) = 2e-059
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -2
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 358 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 179
Score = 108 bits (231), Expect(3) = 2e-059
Identities = 49/68 (72%), Positives = 51/68 (75%)
Frame = +3 / -2
Query: 540 PGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPE 719
PG HGT LN MSM+P CRS S RP LAM PNAVPLRSKWYLATG**FMSVM TV PE
Sbjct: 556 PGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPE 377
Query: 720 QAGWLLFR 743
Q L+ R
Sbjct: 376 QDWSLVHR 353
Score = 101 bits (215), Expect(2) = 1e-041
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 362 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 541
Query: 554 VQLP 543
V++P
Sbjct: 542 VRVP 553
Score = 89.0 bits (188), Expect(2) = 1e-041
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 179 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 358
Score = 31.8 bits (63), Expect(3) = 2e-059
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +3 / -3
Query: 441 SACTTSPSLFSCSMSTARYMGLEPCWTRK 527
S CT S S S ST +Y GL PC T K
Sbjct: 654 STCTRYRSRSSYSTSTVKYTGLYPCSTCK 568
>gb|BF625170.3|BF625170 HVSMEa0006D08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0006D08f, mRNA sequence
Length = 858
Score = 145 bits (311), Expect(2) = 4e-069
Identities = 62/106 (58%), Positives = 77/106 (72%)
Frame = -3 / +2
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
S +CSG +TV+ITDMNYYPVA+YHFDLSGT F ++A GLN+KL H+GIID+ FRR
Sbjct: 374 SGDRSCSGNIETVMITDMNYYPVAQYHFDLSGTDFCALAKSGLNEKLPHSGIIDIHFRRG 553
Query: 556 PCNFPGLTITFRVQHGSNPMYLAVLIEHENKDGDVVQADIMQSNSG 419
NFPGL I F V G N +YLAVL + ++ DGDV D ++NSG
Sbjct: 554 AGNFPGLKINFHVVEGFNAVYLAVLDQSDDLDGDVDHVD*KEANSG 691
Score = 137 bits (293), Expect(2) = 4e-069
Identities = 51/77 (66%), Positives = 59/77 (76%)
Frame = -3 / +2
Query: 973 NATTASQDRSLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNE 794
+A A+ + S LSY S WLPA ATW+G+P AGP +N ACGFK NQYPF MTSCGN+
Sbjct: 143 SAAAANLNTSALSYRSAWLPATATWFGSPNCAGPDNNSRACGFKHVNQYPFCFMTSCGNQ 322
Query: 793 PIFKDGKGCGSCYQIRC 743
P+FKD KGCGSCYQIRC
Sbjct: 323 PLFKDRKGCGSCYQIRC 373
Score = 121 bits (258), Expect(2) = 7e-050
Identities = 59/101 (58%), Positives = 67/101 (66%)
Frame = +3 / -1
Query: 420 PELLCMMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRS 599
PEL S +TSPS S STARY L+P T K+++RPGKL L MSM+P C S
Sbjct: 690 PELASFQST*STSPSRSSD*SSTARYTALKPSTT*KLILRPGKLPAPLLKWMSMMPECGS 511
Query: 600 LSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQ 722
SFRP LA +VPLRSKWY ATG**FMSV+ITV PEQ
Sbjct: 510 FSFRPDLARAQKSVPLRSKWYWATG**FMSVIITVSMLPEQ 388
Score = 97.3 bits (206), Expect(2) = 7e-050
Identities = 47/94 (50%), Positives = 56/94 (59%)
Frame = +3 / -1
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EPQPL SL G LPQ+VM +NGYW L P A L +GPA +G P QVA+AGS
Sbjct: 372 HRIW*QEPQPLRSLNRGWLPQEVMKQNGYWFTCLKPQARLLLSGPAQLGDPNQVAVAGSH 193
Query: 924 PLL*DNKDLSCEAVVALRLSCCSARAPEVTTTTE 1025
L*D ++ A A ++ A VT TE
Sbjct: 192 ADL*DKAEVLRFAAAAEETYEAASTAASVTAFTE 91
Score = 94.5 bits (200), Expect(2) = 3e-029
Identities = 43/82 (52%), Positives = 50/82 (60%)
Frame = -2 / +1
Query: 737 EQPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAG 558
++ P LLR+ D D H HELLPG VPL PERHG+ GQ+GP+R+ PA HRH Q G
Sbjct: 373 QRRPLLLRQHRDCDDHRHELLPGRPVPL*PERHGLLRPGQVGPKRETPALGHHRHPFQEG 552
Query: 557 AVQLPGPDHHLPRPARLQPHVP 492
QL P L R RLQ VP
Sbjct: 553 CRQLSRPQDQLSRGGRLQRGVP 618
Score = 54.7 bits (113), Expect(2) = 3e-029
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = -2 / +1
Query: 854 VRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
+R+Q +PVPVL+HD+L Q A +QG QGL L+LPDT+
Sbjct: 262 LRLQAREPVPVLLHDLLRQPAPVQGPQGLWLLLPDTM 372
>gb|BI959378.1|BI959378 HVSMEn0019H04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019H04f, mRNA sequence
Length = 663
Score = 150 bits (323), Expect(3) = 7e-069
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 168 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 347
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 348 GSCYQIRC 371
Score = 128 bits (274), Expect(2) = 2e-052
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 370 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 191
Score = 120 bits (256), Expect(3) = 7e-069
Identities = 46/65 (70%), Positives = 56/65 (86%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+ IID+QF+RV
Sbjct: 372 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSRIIDIQFKRV 551
Query: 556 PCNFP 542
PC P
Sbjct: 552 PCEVP 566
Score = 98.2 bits (208), Expect(2) = 2e-052
Identities = 46/67 (68%), Positives = 48/67 (71%)
Frame = +3 / -3
Query: 543 GKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPEQ 722
G HGT LN MSM+ CRS S P LAM PNAVPLRSKWYLATG**FMSVM TV PEQ
Sbjct: 565 GTSHGTLLNWMSMMRECRSFSLSPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPEQ 386
Query: 723 AGWLLFR 743
L+ R
Sbjct: 385 DWSLVHR 365
Score = 90.4 bits (191), Expect(2) = 3e-038
Identities = 38/62 (61%), Positives = 43/62 (69%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ +R+APA HRH +Q A
Sbjct: 374 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARAQREAPALPHHRHPIQESA 553
Query: 554 VQ 549
V+
Sbjct: 554 VR 559
Score = 89.0 bits (188), Expect(2) = 3e-038
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 191 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 370
Score = 29.5 bits (58), Expect(3) = 7e-069
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 511 GSNPMYLAVLIEHENKDGD 455
GSNP+Y V +E++ +DG+
Sbjct: 599 GSNPVYFPVPVEYQGRDGN 655
>gb|CA022206.1|CA022206 HZ42H09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42H09
5-PRIME, mRNA sequence
Length = 567
Score = 150 bits (323), Expect(2) = 2e-068
Identities = 55/68 (80%), Positives = 59/68 (86%)
Frame = -3 / +3
Query: 946 SLLSYSSGWLPAKATWYGAPTGAGPVDNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGC 767
S + W A+ATWYGAPTGAGP+D+GGACGFK TNQYPFSSMTSCGNEPIFKDGKGC
Sbjct: 165 SAFTADPNWEDARATWYGAPTGAGPMDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGC 344
Query: 766 GSCYQIRC 743
GSCYQIRC
Sbjct: 345 GSCYQIRC 368
Score = 129 bits (277), Expect(2) = 2e-068
Identities = 49/66 (74%), Positives = 59/66 (89%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITDMNYYPVAKYHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRV 557
+N +CSG +TV+ITDMNYYPVAKYHFDLSGTAFG+MA GL++KLRH+GIID+QF+RV
Sbjct: 369 TNDQSCSGNPETVVITDMNYYPVAKYHFDLSGTAFGAMAKPGLSEKLRHSGIIDIQFKRV 548
Query: 556 PCNFPG 539
PC FPG
Sbjct: 549 PCEFPG 566
Score = 128 bits (274), Expect(2) = 2e-055
Identities = 51/60 (85%), Positives = 52/60 (86%)
Frame = +3 / -3
Query: 744 HRIW*HEPQPLPSLKMGSLPQDVMDENGYWLVPLNPHAPPLSTGPAPVGAPYQVALAGSQ 923
HRIW* EP PLPSLKMGSLP DVM+E GYWLV LNPHAPP S GPAPVGAPYQVALA SQ
Sbjct: 367 HRIW*QEPHPLPSLKMGSLPHDVMEEKGYWLVFLNPHAPPSSMGPAPVGAPYQVALASSQ 188
Score = 108 bits (231), Expect(2) = 2e-055
Identities = 49/68 (72%), Positives = 51/68 (75%)
Frame = +3 / -3
Query: 540 PGKLHGTRLNCMSMIPACRSLSFRPQLAMDPNAVPLRSKWYLATG**FMSVMITV*ATPE 719
PG HGT LN MSM+P CRS S RP LAM PNAVPLRSKWYLATG**FMSVM TV PE
Sbjct: 565 PGNSHGTLLNWMSMMPECRSFSLRPGLAMAPNAVPLRSKWYLATG**FMSVMTTVSGLPE 386
Query: 720 QAGWLLFR 743
Q L+ R
Sbjct: 385 QDWSLVHR 362
Score = 101 bits (215), Expect(2) = 1e-041
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = -2 / +2
Query: 734 QPPGLLRRGSDGDHHGHELLPGGQVPLRPERHGVRVHGQLGPERQAPARRDHRHAVQAGA 555
Q P LLR+ DG HH HELLPG QVPLRPE H VR HGQ P+R+APA R HRH VQ A
Sbjct: 371 QRPVLLRQPGDGGHHRHELLPGCQVPLRPEWHRVRRHGQARPQREAPALRHHRHPVQESA 550
Query: 554 VQLP 543
V++P
Sbjct: 551 VRVP 562
Score = 89.0 bits (188), Expect(2) = 1e-041
Identities = 37/60 (61%), Positives = 43/60 (71%)
Frame = -2 / +2
Query: 923 LAAGQGHLVXXXXXXXXXXXRWCVRVQGHQPVPVLVHDVLWQRAHLQGRQGLRLMLPDTV 744
L QGHLV RWCVRVQ HQPVP+L+HD++ QRAHLQG QG+RL+LPDTV
Sbjct: 188 LGGRQGHLVRRAHGCRPHGRRWCVRVQEHQPVPLLLHDIVRQRAHLQGWQGMRLLLPDTV 367
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 474,474,503
Number of Sequences: 312970
Number of extensions: 8114904
Number of successful extensions: 106908
Number of sequences better than 1.0e-020: 211
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13832744539
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)