TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748501.2.2
(993 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ753427.1|BQ753427 EBan01_SQ004_D21_R anther, yellow st... 414 e-115
gb|BM442006.2|BM442006 EBan01_SQ001_K04_R anther, yellow st... 202 e-103
gb|BQ753289.1|BQ753289 EBan01_SQ001_D10_R anther, yellow st... 202 e-101
gb|BQ764354.1|BQ764354 EBan01_SQ005_I18_R anther, yellow st... 202 7e-094
gb|BM442464.2|BM442464 EBan01_SQ003_E04_R anther, yellow st... 329 1e-089
gb|CK125568.1|CK125568 BES1824109b06 BES1824 Hordeum vulgar... 168 3e-072
gb|BQ765063.1|BQ765063 EBca01_SQ005_N18_R carpel, pre-anthe... 168 3e-072
gb|CA025095.1|CA025095 HZ51D05r HZ Hordeum vulgare subsp. v... 168 3e-072
gb|CK123865.1|CK123865 BES1824105n21 BES1824 Hordeum vulgar... 168 5e-072
gb|AL505296.1|AL505296 AL505296 Hordeum vulgare Barke roots... 168 7e-072
gb|BJ463541.1|BJ463541 BJ463541 K. Sato unpublished cDNA li... 168 4e-071
gb|BI950605.1|BI950605 HVSMEl0021J24f Hordeum vulgare spike... 160 5e-069
gb|AV926936.1|AV926936 AV926936 K. Sato unpublished cDNA li... 146 2e-065
gb|BM369644.2|BM369644 EBem07_SQ004_D10_R embryo, 28 DPA, n... 146 3e-065
gb|BG300145.1|BG300145 HVSMEb0010G24f Hordeum vulgare seedl... 144 2e-064
gb|BM372397.2|BM372397 EBro03_SQ004_N12_R root, 3 week, wat... 168 8e-064
gb|AL506237.1|AL506237 AL506237 Hordeum vulgare Barke devel... 128 2e-059
gb|BQ464047.1|BQ464047 HF01D07T HF Hordeum vulgare subsp. v... 127 3e-059
gb|BJ463425.1|BJ463425 BJ463425 K. Sato unpublished cDNA li... 127 3e-059
gb|BQ460388.1|BQ460388 HA09M17r HA Hordeum vulgare subsp. v... 127 3e-059
gb|BU997945.1|BU997945 HI09I01r HI Hordeum vulgare subsp. v... 127 3e-059
gb|CA032315.1|CA032315 HX12K14r HX Hordeum vulgare subsp. v... 123 9e-059
gb|BJ476245.1|BJ476245 BJ476245 K. Sato unpublished cDNA li... 168 2e-058
gb|BM376791.2|BM376791 EBem05_SQ003_E02_R embryo, 14 DPA, n... 125 2e-058
gb|AW982205.2|AW982205 HVSMEg0002E10f Hordeum vulgare pre-a... 127 6e-057
gb|BM377129.2|BM377129 EBem05_SQ004_D11_R embryo, 14 DPA, n... 123 8e-057
gb|BE216049.2|BE216049 HV_CEb0009E03f Hordeum vulgare seedl... 168 7e-056
gb|BQ471999.1|BQ471999 HV04C01r HV Hordeum vulgare subsp. v... 127 7e-056
gb|BQ764615.1|BQ764615 EBca01_SQ004_K11_R carpel, pre-anthe... 121 9e-055
gb|BM373914.2|BM373914 EBma03_SQ003_B17_R maternal, 8 DPA, ... 125 2e-054
gb|BQ469637.1|BQ469637 HZ01G16r HZ Hordeum vulgare subsp. v... 123 2e-051
gb|BM376958.2|BM376958 EBem05_SQ003_L10_R embryo, 14 DPA, n... 127 8e-051
gb|BI776278.2|BI776278 EBem04_SQ001_F10_R embryo, 12 DPA, n... 168 2e-050
gb|BU996702.1|BU996702 HM14H14r HM Hordeum vulgare subsp. v... 123 3e-050
gb|BQ764551.1|BQ764551 EBca01_SQ004_O06_R carpel, pre-anthe... 168 2e-049
gb|BJ466489.1|BJ466489 BJ466489 K. Sato unpublished cDNA li... 168 2e-049
gb|BJ476665.1|BJ476665 BJ476665 K. Sato unpublished cDNA li... 168 2e-049
gb|BU988629.1|BU988629 HF18D11r HF Hordeum vulgare subsp. v... 127 4e-049
gb|AV919448.1|AV919448 AV919448 K. Sato unpublished cDNA li... 121 2e-048
gb|AL505692.1|AL505692 AL505692 Hordeum vulgare Barke roots... 123 2e-048
gb|AV918472.1|AV918472 AV918472 K. Sato unpublished cDNA li... 121 2e-047
gb|BJ465856.1|BJ465856 BJ465856 K. Sato unpublished cDNA li... 121 2e-046
gb|AV931773.1|AV931773 AV931773 K. Sato unpublished cDNA li... 168 5e-046
gb|BU999728.1|BU999728 HI15I03r HI Hordeum vulgare subsp. v... 123 1e-045
gb|AV913180.1|AV913180 AV913180 K. Sato unpublished cDNA li... 121 9e-045
gb|BJ460376.1|BJ460376 BJ460376 K. Sato unpublished cDNA li... 168 2e-044
gb|BU977218.1|BU977218 HA11A17r HA Hordeum vulgare subsp. v... 123 2e-041
gb|CA028260.1|CA028260 HZ61H10r HZ Hordeum vulgare subsp. v... 123 2e-041
gb|BM817001.1|BM817001 HC05E10_T3.ab1 HC Hordeum vulgare su... 168 4e-041
gb|BJ452829.1|BJ452829 BJ452829 K. Sato unpublished cDNA li... 168 4e-041
gb|BQ765160.1|BQ765160 EBca01_SQ005_P20_R carpel, pre-anthe... 168 4e-041
gb|BQ765444.1|BQ765444 EBro03_SQ007_N05_R root, 3 week, wat... 168 4e-041
gb|CA022424.1|CA022424 HZ43C05r HZ Hordeum vulgare subsp. v... 166 1e-040
gb|BM442216.2|BM442216 EBan01_SQ002_I23_R anther, yellow st... 164 9e-040
gb|BM374546.2|BM374546 EBpi03_SQ003_O19_R pistil, 4 DPA, no... 123 5e-039
gb|CA027891.1|CA027891 HZ60F17r HZ Hordeum vulgare subsp. v... 121 5e-039
gb|BM373611.2|BM373611 EBma03_SQ002_B19_R maternal, 8 DPA, ... 154 7e-037
gb|BU982393.1|BU982393 HA26G16r HA Hordeum vulgare subsp. v... 123 9e-036
gb|CA017403.1|CA017403 HV05B16r HV Hordeum vulgare subsp. v... 123 2e-035
gb|BM441947.2|BM441947 EBan01_SQ001_A02_R anther, yellow st... 100 3e-034
gb|CB880925.1|CB880925 HM08E02w HM Hordeum vulgare subsp. v... 143 1e-033
gb|AV914412.1|AV914412 AV914412 K. Sato unpublished cDNA li... 121 2e-033
gb|BQ468809.1|BQ468809 HM02G14r HM Hordeum vulgare subsp. v... 143 2e-033
gb|BU988248.1|BU988248 HF17B16r HF Hordeum vulgare subsp. v... 127 4e-032
gb|AL502569.1|AL502569 AL502569 Hordeum vulgare Barke roots... 129 3e-029
gb|AJ432815.1|AJ432815 AJ432815 S00002 Hordeum vulgare subs... 126 2e-028
gb|BQ665870.1|BQ665870 HZ01G16u HZ Hordeum vulgare subsp. v... 126 2e-028
gb|CB859146.1|CB859146 HI09I01w HI Hordeum vulgare subsp. v... 121 2e-028
gb|BU994803.1|BU994803 HM08E02r HM Hordeum vulgare subsp. v... 95 3e-028
gb|BF616370.3|BF616370 HVSMEc0007A02f Hordeum vulgare seedl... 123 1e-027
gb|AJ462919.1|AJ462919 AJ462919 S00002 Hordeum vulgare subs... 121 6e-027
gb|BQ657073.1|BQ657073 HA09M17u HA Hordeum vulgare subsp. v... 121 6e-027
gb|BQ460921.1|BQ460921 HE01M06r HE Hordeum vulgare subsp. v... 121 8e-027
gb|CA003910.1|CA003910 HS15O21r HS Hordeum vulgare subsp. v... 120 1e-026
gb|BM373658.2|BM373658 EBma03_SQ002_E03_R maternal, 8 DPA, ... 118 5e-026
gb|BI950704.1|BI950704 HVSMEl0022M04f Hordeum vulgare spike... 109 3e-023
gb|AL502947.1|AL502947 AL502947 Hordeum vulgare Barke roots... 106 2e-022
>gb|BQ753427.1|BQ753427 EBan01_SQ004_D21_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_D21 5', mRNA sequence
Length = 633
Score = 414 bits (899), Expect = e-115
Identities = 162/180 (90%), Positives = 170/180 (94%)
Frame = +2 / +2
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
SFTGTQDKC+ C+KTVHFIDLLTADGV YHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH
Sbjct: 71 SFTGTQDKCSACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
Query: 251 FEQLFKETGSFSKNFTPGGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTL 430
FEQLFKETGSFSK FTPG KS DK ELTRAPSKLS+AFSGTQDKCAAC KTVYPLEK+TL
Sbjct: 251 FEQLFKETGSFSKKFTPGNKSGDKSELTRAPSKLSAAFSGTQDKCAACTKTVYPLEKMTL 430
Query: 431 EGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQDTL 610
EG++YHKSCFKCSHGGCILTTSSYAALNGVLYCKIHF QLFME+GSYSHM KKSPSQ+ L
Sbjct: 431 EGDAYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMERGSYSHMKKKSPSQEVL 610
Score = 341 bits (740), Expect = 3e-093
Identities = 149/176 (84%), Positives = 154/176 (87%)
Frame = -1 / -1
Query: 597 DGLFFIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNF 418
+GLFF MWL*LP SMNSC KWILQY+TPL AA*EEVVRMQPP EHLKQLLW SPSRV F
Sbjct: 597 EGLFFFMWL*LPLSMNSCPKWILQYKTPLRAA*EEVVRMQPPWEHLKQLLWYASPSRVIF 418
Query: 417 SSGYTVFWQAAHLS*VPENADDSLLGALVSSPLSEDLPPGVKFLEKLPVSLKSCSKWVLQ 238
SSGYTVF QAAHLS*VPE A DSLLGALVSS LS DL PGV F EKLPVSLKSCSK VLQ
Sbjct: 417 SSGYTVFVQAAHLS*VPEKAADSLLGALVSSLLSPDLLPGVNFFEKLPVSLKSCSKCVLQ 238
Query: 237 YSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKE 70
TPSMEE*LHIERIPLQWLHLK VLW*+TPSAVRRSMKWTV SH+ HLSCVPVK+
Sbjct: 237 *RTPSMEE*LHIERIPLQWLHLKQVLW*MTPSAVRRSMKWTVFSHAEHLSCVPVKD 70
Score = 169 bits (363), Expect(2) = 1e-050
Identities = 73/101 (72%), Positives = 84/101 (83%)
Frame = +1 / +1
Query: 163 DMLQVQPLQRDPLDVQLLFHGRCAVLQDPLRAALQGDRELLQELHARWQVFRQG*TDKGP 342
D+LQ+QPLQRDPLDVQL FHGRC +LQD LRAALQGDRELL+E+H Q++RQ *TDKGP
Sbjct: 163 DLLQMQPLQRDPLDVQLFFHGRCPLLQDALRAALQGDRELLKEVHTG*QIWRQE*TDKGP 342
Query: 343 QQAIICVFWYSG*VCSLPENSVPAGEVDSGRRVLPQELLQV 465
+QAI C+ YSG*VCSL ENSV + DSG R +PQELLQV
Sbjct: 343 KQAIRCLLRYSG*VCSLHENSVSTRKDDSGGRCIPQELLQV 465
Score = 125 bits (267), Expect(2) = 7e-046
Identities = 58/84 (69%), Positives = 65/84 (77%)
Frame = -3 / -3
Query: 553 EQLREVDLAVQNAVERGVGGGGEDAAPVRALEAALVVGLAFQSQLLQRVHCFLASCTLIL 374
EQL E+DLAVQ+AVE G+GGGG DAAPV ALEAALVV +A QS L + +HCF A CTLIL
Sbjct: 553 EQLPEMDLAVQDAVEGGIGGGG*DAAPVGALEAALVVCIALQSHLFEWIHCFRAGCTLIL 374
Query: 373 STRKRR**LAGGPCQFTLV*RLAT 302
ST + *LA GPCQFTLV R T
Sbjct: 373 STGEGSG*LAWGPCQFTLVARFVT 302
Score = 115 bits (245), Expect = 5e-025
Identities = 43/72 (59%), Positives = 58/72 (80%)
Frame = +2 / +2
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
+F+GTQDKC+AC+KTV+ ++ LT +G YHK+CFKCSH IL+ SY++++GVLYCK H
Sbjct: 71 SFTGTQDKCSACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
Query: 539 FAQLFMEKGSYS 574
F QLF E GS+S
Sbjct: 251 FEQLFKETGSFS 286
Score = 114 bits (244), Expect(2) = 2e-035
Identities = 49/81 (60%), Positives = 56/81 (69%)
Frame = -2 / -2
Query: 545 ARSGSCSTEXXXXXXXXRW*GCSPRAST*SSSCGRTRLPESTSPAGTLFSGKLHTYPEYQ 366
AR+GSCST RW GCSPR ST*SSSCG R PES+ TLFS +LHTYPEY+
Sbjct: 545 ARNGSCSTRRR*GRHRRRWLGCSPRGST*SSSCGMHRPPESSFRVDTLFSCRLHTYPEYR 366
Query: 365 KTQMIACWGPLSVHPCLKTCH 303
+ Q IAC GPLSVH C + C+
Sbjct: 365 RRQRIACLGPLSVHSCRQICY 303
Score = 112 bits (239), Expect = 3e-024
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = +2 / +2
Query: 68 SSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 247
++F+GTQDKCA C KTV+ ++ +T +G YHK+CFKCSH IL+ SY++++GVLYCK
Sbjct: 356 AAFSGTQDKCAACTKTVYPLEKMTLEGDAYHKSCFKCSHGGCILTTSSYAALNGVLYCKI 535
Query: 248 HFEQLFKETGSFS 286
HF QLF E GS+S
Sbjct: 536 HFGQLFMERGSYS 574
Score = 101 bits (216), Expect(2) = 2e-023
Identities = 49/91 (53%), Positives = 54/91 (59%)
Frame = +3 / +3
Query: 162 RHASSAATAKGSSRCAATLPWTVCCXXXXXXXXXXXXXXXXXXXXXQVASLQTRVN*QGP 341
R AS+AATAKGSSRCAA LPWTV +V +L TRVN*QGP
Sbjct: 162 RPASNAATAKGSSRCAAILPWTVSSTARRTSSSSSRRQGASQRSSHRVTNLATRVN*QGP 341
Query: 342 PASYHLRFLVLRISVQLARKQCTRWRS*LWK 434
ASY L VLRISVQ ARKQC + *LW+
Sbjct: 342 QASYPLPSPVLRISVQPARKQCIHSKR*LWR 434
Score = 79.4 bits (167), Expect(2) = 7e-046
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -3 / -3
Query: 235 QHTVHGRVAAHREDPFAVAALEACLMVGDAVGREEVDEVD 116
+ TVHGR+AAHREDPFAVAA EA L+V DAVGREEVDEVD
Sbjct: 235 EDTVHGRIAAHREDPFAVAAFEAGLVVDDAVGREEVDEVD 116
Score = 54.7 bits (113), Expect(2) = 2e-035
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / -2
Query: 230 HRPWKSSCTSRGSLCSGCT*SMS 162
HRPWK+SCTSRGSLCSGC *S S
Sbjct: 230 HRPWKNSCTSRGSLCSGCI*SRS 162
Score = 51.5 bits (106), Expect(2) = 1e-050
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +1 / +1
Query: 523 VLQDPLRAAVHGEGELQPHDEEEPV 597
VLQDP RA VHGE +LQPH+EEEP+
Sbjct: 523 VLQDPFRATVHGERKLQPHEEEEPL 597
Score = 27.2 bits (53), Expect(2) = 2e-023
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 522 CTARSTSRSCSW 557
CTARS S +CSW
Sbjct: 522 CTARSISGNCSW 557
>gb|BM442006.2|BM442006 EBan01_SQ001_K04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_K04 5', mRNA sequence
Length = 647
Score = 202 bits (436), Expect(2) = e-103
Identities = 77/86 (89%), Positives = 81/86 (94%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
SFTGTQDKC CDKTVHFIDLLTADGV+YHKTCFKCSHCKG LSMC+YSSMDGVLYCKTH
Sbjct: 114 SFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTH 293
Query: 251 FEQLFKETGSFSKNFTPGGKSSDKGE 328
FEQLFKETGSFSK FTPGGKS++K E
Sbjct: 294 FEQLFKETGSFSKKFTPGGKSAEKSE 371
Score = 193 bits (417), Expect(2) = e-103
Identities = 75/99 (75%), Positives = 87/99 (87%)
Frame = +2 / +3
Query: 305 GKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCI 484
G S + +APSK+SSAFSGTQDKCAACQKTVYPLEKL+LEGE YHK CFKCSHGGCI
Sbjct: 345 GGKSAEKSEAKAPSKMSSAFSGTQDKCAACQKTVYPLEKLSLEGECYHKGCFKCSHGGCI 524
Query: 485 LTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMKKSPSQ 601
LTTSSYAALNG+LYCKIHF+QLF EKGSY+H++K + ++
Sbjct: 525 LTTSSYAALNGILYCKIHFSQLFKEKGSYNHLIKTAQTK 641
Score = 183 bits (394), Expect(2) = 3e-065
Identities = 76/98 (77%), Positives = 82/98 (83%)
Frame = -1 / -2
Query: 354 DSLLGALVSSPLSEDLPPGVKFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLH 175
D +L +S S DLPPGV F EKLPVSLKSCSKWVLQ TPSMEE*LHIER+PLQWLH
Sbjct: 397 DDILLGAFASLFSADLPPGVNFFEKLPVSLKSCSKWVLQ*RTPSMEE*LHIERVPLQWLH 218
Query: 174 LKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKEDMV 61
LKHVLW* TPSAVRRSMKWTVLSH HLSCVPVK+ ++
Sbjct: 217 LKHVLW*ETPSAVRRSMKWTVLSHVLHLSCVPVKDMVI 104
Score = 156 bits (335), Expect(2) = 5e-055
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+NSC KWILQ R PLSAA EEVVRMQPPCEHLKQ LW* SPS+ +FS+GYT
Sbjct: 622 IRWL*LPFSLNSCEKWILQ*RIPLSAAYEEVVRMQPPCEHLKQPLW*HSPSKDSFSNGYT 443
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QAAHLS*VPE ADD LLGA S
Sbjct: 442 VF*QAAHLS*VPEKADDILLGAFAS 368
Score = 119 bits (255), Expect = 2e-026
Identities = 44/82 (53%), Positives = 63/82 (76%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAA 508
L R+P++++ +F+GTQDKC C KTV+ ++ LT +G SYHK+CFKCSH L+ +Y++
Sbjct: 84 LGRSPARITMSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSS 263
Query: 509 LNGVLYCKIHFAQLFMEKGSYS 574
++GVLYCK HF QLF E GS+S
Sbjct: 264 MDGVLYCKTHFEQLFKETGSFS 329
Score = 113 bits (242), Expect = 1e-024
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = +2 / +3
Query: 68 SSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 247
S+F+GTQDKCA C KTV+ ++ L+ +G YHK CFKCSH IL+ SY++++G+LYCK
Sbjct: 396 SAFSGTQDKCAACQKTVYPLEKLSLEGECYHKGCFKCSHGGCILTTSSYAALNGILYCKI 575
Query: 248 HFEQLFKETGSFS 286
HF QLFKE GS++
Sbjct: 576 HFSQLFKEKGSYN 614
Score = 97.3 bits (206), Expect(3) = 2e-035
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1 / +2
Query: 163 DMLQVQPLQRDPLDVQLLFHGRCAVLQDPLRAALQGDRELLQELHARWQV 312
DMLQVQPLQ DPLDVQLLFHG C +LQDP R LQGD ELL+E++ARWQ+
Sbjct: 206 DMLQVQPLQGDPLDVQLLFHGWCPLLQDPFRTTLQGDGELLKEIYARWQI 355
Score = 85.8 bits (181), Expect(2) = 3e-065
Identities = 44/74 (59%), Positives = 53/74 (71%)
Frame = -3 / -1
Query: 553 EQLREVDLAVQNAVERGVGGGGEDAAPVRALEAALVVGLAFQSQLLQRVHCFLASCTLIL 374
EQL E+DLAV+++VER V GG +DAA +RALEAALVV + Q LLQ VH FL T IL
Sbjct: 593 EQL*EMDLAVEDSVERSVRGGRQDAATMRALEAALVVAFSLQG*LLQWVHGFLTGRTFIL 414
Query: 373 STRKRR**LAGGPC 332
S+R+ R* LA C
Sbjct: 413 SSREGR*HLAWSFC 372
Score = 79.0 bits (166), Expect(2) = 5e-055
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -3 / -1
Query: 235 QHTVHGRVAAHREDPFAVAALEACLMVGDAVGREEVDEVD 116
+ T+HGRV AHRE P AVAALEACL+VGDAVG EEVDEVD
Sbjct: 278 EDTIHGRVVAHREGPLAVAALEACLVVGDAVGGEEVDEVD 159
Score = 58.3 bits (121), Expect(3) = 2e-035
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +1 / +2
Query: 334 KGPQQAIICVFWYSG*VCSLPENSVPAGEVDSGRRVLPQELLQV 465
K +Q +IC+ W SG*+C L +N VP GE G R+LPQ LLQV
Sbjct: 374 KSSKQDVICLLWNSG*MCGLSKNRVPIGEAILGGRMLPQGLLQV 505
Score = 31.8 bits (63), Expect(3) = 2e-035
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 523 VLQDPLRAAVHGEGELQP 576
+LQDP AV GEG+LQP
Sbjct: 563 LLQDPFLTAVQGEGKLQP 616
>gb|BQ753289.1|BQ753289 EBan01_SQ001_D10_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_D10 5', mRNA sequence
Length = 634
Score = 202 bits (436), Expect(2) = e-101
Identities = 77/86 (89%), Positives = 81/86 (94%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
SFTGTQDKC CDKTVHFIDLLTADGV+YHKTCFKCSHCKG LSMC+YSSMDGVLYCKTH
Sbjct: 120 SFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTH 299
Query: 251 FEQLFKETGSFSKNFTPGGKSSDKGE 328
FEQLFKETGSFSK FTPGGKS++K E
Sbjct: 300 FEQLFKETGSFSKKFTPGGKSAEKSE 377
Score = 186 bits (401), Expect(2) = e-101
Identities = 73/94 (77%), Positives = 83/94 (88%)
Frame = +2 / +3
Query: 305 GKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCI 484
G S + +APSK+SSAFSGTQDKCAACQKTVYPLEKL+LEGE YHK CFKCSHGGCI
Sbjct: 351 GGKSAEKSEAKAPSKMSSAFSGTQDKCAACQKTVYPLEKLSLEGECYHKGCFKCSHGGCI 530
Query: 485 LTTSSYAALNGVLYCKIHFAQLFMEKGSYSHMMK 586
LTTSSYAALNG+LY +IHF+QLF EKGSY+H++K
Sbjct: 531 LTTSSYAALNGILYWQIHFSQLFKEKGSYNHLIK 632
Score = 183 bits (394), Expect(2) = 2e-064
Identities = 76/98 (77%), Positives = 82/98 (83%)
Frame = -1 / -1
Query: 354 DSLLGALVSSPLSEDLPPGVKFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLH 175
D +L +S S DLPPGV F EKLPVSLKSCSKWVLQ TPSMEE*LHIER+PLQWLH
Sbjct: 403 DDILLGAFASLFSADLPPGVNFFEKLPVSLKSCSKWVLQ*RTPSMEE*LHIERVPLQWLH 224
Query: 174 LKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKEDMV 61
LKHVLW* TPSAVRRSMKWTVLSH HLSCVPVK+ ++
Sbjct: 223 LKHVLW*ETPSAVRRSMKWTVLSHVLHLSCVPVKDMVI 110
Score = 154 bits (330), Expect(2) = 2e-054
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+NSC KWI Q R PLSAA EEVVRMQPPCEHLKQ LW* SPS+ +FS+GYT
Sbjct: 628 IRWL*LPFSLNSCEKWICQ*RIPLSAAYEEVVRMQPPCEHLKQPLW*HSPSKDSFSNGYT 449
Query: 402 VFWQAAHLS*VPENADDSLLGALVS 328
VF QAAHLS*VPE ADD LLGA S
Sbjct: 448 VF*QAAHLS*VPEKADDILLGAFAS 374
Score = 119 bits (255), Expect = 2e-026
Identities = 44/82 (53%), Positives = 63/82 (76%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAA 508
L R+P++++ +F+GTQDKC C KTV+ ++ LT +G SYHK+CFKCSH L+ +Y++
Sbjct: 90 LGRSPARITMSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSS 269
Query: 509 LNGVLYCKIHFAQLFMEKGSYS 574
++GVLYCK HF QLF E GS+S
Sbjct: 270 MDGVLYCKTHFEQLFKETGSFS 335
Score = 106 bits (227), Expect = 2e-022
Identities = 40/73 (54%), Positives = 56/73 (76%)
Frame = +2 / +3
Query: 68 SSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 247
S+F+GTQDKCA C KTV+ ++ L+ +G YHK CFKCSH IL+ SY++++G+LY +
Sbjct: 402 SAFSGTQDKCAACQKTVYPLEKLSLEGECYHKGCFKCSHGGCILTTSSYAALNGILYWQI 581
Query: 248 HFEQLFKETGSFS 286
HF QLFKE GS++
Sbjct: 582 HFSQLFKEKGSYN 620
Score = 97.3 bits (206), Expect(3) = 2e-034
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1 / +2
Query: 163 DMLQVQPLQRDPLDVQLLFHGRCAVLQDPLRAALQGDRELLQELHARWQV 312
DMLQVQPLQ DPLDVQLLFHG C +LQDP R LQGD ELL+E++ARWQ+
Sbjct: 212 DMLQVQPLQGDPLDVQLLFHGWCPLLQDPFRTTLQGDGELLKEIYARWQI 361
Score = 83.5 bits (176), Expect(2) = 2e-064
Identities = 43/74 (58%), Positives = 52/74 (70%)
Frame = -3 / -3
Query: 553 EQLREVDLAVQNAVERGVGGGGEDAAPVRALEAALVVGLAFQSQLLQRVHCFLASCTLIL 374
EQL E+DL V+++VER V GG +DAA +RALEAALVV + Q LLQ VH FL T IL
Sbjct: 599 EQL*EMDLPVEDSVERSVRGGRQDAATMRALEAALVVAFSLQG*LLQWVHGFLTGRTFIL 420
Query: 373 STRKRR**LAGGPC 332
S+R+ R* LA C
Sbjct: 419 SSREGR*HLAWSFC 378
Score = 79.0 bits (166), Expect(2) = 2e-054
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -3 / -3
Query: 235 QHTVHGRVAAHREDPFAVAALEACLMVGDAVGREEVDEVD 116
+ T+HGRV AHRE P AVAALEACL+VGDAVG EEVDEVD
Sbjct: 284 EDTIHGRVVAHREGPLAVAALEACLVVGDAVGGEEVDEVD 165
Score = 58.3 bits (121), Expect(3) = 2e-034
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +1 / +2
Query: 334 KGPQQAIICVFWYSG*VCSLPENSVPAGEVDSGRRVLPQELLQV 465
K +Q +IC+ W SG*+C L +N VP GE G R+LPQ LLQV
Sbjct: 380 KSSKQDVICLLWNSG*MCGLSKNRVPIGEAILGGRMLPQGLLQV 511
Score = 29.0 bits (57), Expect(3) = 2e-034
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 523 VLQDPLRAAVHGEGELQP 576
+L DP AV GEG+LQP
Sbjct: 569 LLADPFLTAVQGEGKLQP 622
>gb|BQ764354.1|BQ764354 EBan01_SQ005_I18_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_I18 5', mRNA sequence
Length = 598
Score = 202 bits (436), Expect(2) = 7e-094
Identities = 77/86 (89%), Positives = 81/86 (94%)
Frame = +2 / +3
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
SFTGTQDKC CDKTVHFIDLLTADGV+YHKTCFKCSHCKG LSMC+YSSMDGVLYCKTH
Sbjct: 123 SFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYCKTH 302
Query: 251 FEQLFKETGSFSKNFTPGGKSSDKGE 328
FEQLFKETGSFSK FTPGGKS++K E
Sbjct: 303 FEQLFKETGSFSKKFTPGGKSAEKSE 380
Score = 183 bits (394), Expect(2) = 4e-063
Identities = 76/98 (77%), Positives = 82/98 (83%)
Frame = -1 / -1
Query: 354 DSLLGALVSSPLSEDLPPGVKFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLH 175
D +L +S S DLPPGV F EKLPVSLKSCSKWVLQ TPSMEE*LHIER+PLQWLH
Sbjct: 406 DDILLGAFASLFSADLPPGVNFFEKLPVSLKSCSKWVLQ*RTPSMEE*LHIERVPLQWLH 227
Query: 174 LKHVLW*VTPSAVRRSMKWTVLSHSAHLSCVPVKEDMV 61
LKHVLW* TPSAVRRSMKWTVLSH HLSCVPVK+ ++
Sbjct: 226 LKHVLW*ETPSAVRRSMKWTVLSHVLHLSCVPVKDMVI 113
Score = 162 bits (348), Expect(2) = 7e-094
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +2 / +3
Query: 305 GKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCI 484
G S + +APSK+SSAFSGTQDKCAACQKTVYPLEKL+LEGE YHK CFKCSHGGCI
Sbjct: 354 GGKSAEKSEAKAPSKMSSAFSGTQDKCAACQKTVYPLEKLSLEGECYHKGCFKCSHGGCI 533
Query: 485 LTTSSYAALNGVLYCKIHFAQ 547
LTTSSYAALNG+LY +IHF+Q
Sbjct: 534 LTTSSYAALNGILYWQIHFSQ 596
Score = 132 bits (282), Expect(2) = 9e-048
Identities = 58/74 (78%), Positives = 61/74 (82%)
Frame = -1 / -1
Query: 549 SCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*V 370
SC KWI Q R PLSAA EEVVRMQPPCEHLKQ LW* SPS+ +FS+GYTVF QAAHLS*V
Sbjct: 598 SCEKWICQ*RIPLSAAYEEVVRMQPPCEHLKQPLW*HSPSKDSFSNGYTVF*QAAHLS*V 419
Query: 369 PENADDSLLGALVS 328
PE ADD LLGA S
Sbjct: 418 PEKADDILLGAFAS 377
Score = 119 bits (255), Expect = 2e-026
Identities = 44/82 (53%), Positives = 63/82 (76%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAA 508
L R+P++++ +F+GTQDKC C KTV+ ++ LT +G SYHK+CFKCSH L+ +Y++
Sbjct: 93 LGRSPARITMSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSS 272
Query: 509 LNGVLYCKIHFAQLFMEKGSYS 574
++GVLYCK HF QLF E GS+S
Sbjct: 273 MDGVLYCKTHFEQLFKETGSFS 338
Score = 97.3 bits (206), Expect(2) = 3e-031
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1 / +2
Query: 163 DMLQVQPLQRDPLDVQLLFHGRCAVLQDPLRAALQGDRELLQELHARWQV 312
DMLQVQPLQ DPLDVQLLFHG C +LQDP R LQGD ELL+E++ARWQ+
Sbjct: 215 DMLQVQPLQGDPLDVQLLFHGWCPLLQDPFRTTLQGDGELLKEIYARWQI 364
Score = 79.0 bits (166), Expect(2) = 9e-048
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -3 / -3
Query: 235 QHTVHGRVAAHREDPFAVAALEACLMVGDAVGREEVDEVD 116
+ T+HGRV AHRE P AVAALEACL+VGDAVG EEVDEVD
Sbjct: 287 EDTIHGRVVAHREGPLAVAALEACLVVGDAVGGEEVDEVD 168
Score = 79.0 bits (166), Expect(2) = 4e-063
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = -3 / -3
Query: 541 EVDLAVQNAVERGVGGGGEDAAPVRALEAALVVGLAFQSQLLQRVHCFLASCTLILSTRK 362
E+DL V+++VER V GG +DAA +RALEAALVV + Q LLQ VH FL T ILS+R+
Sbjct: 590 EMDLPVEDSVERSVRGGRQDAATMRALEAALVVAFSLQG*LLQWVHGFLTGRTFILSSRE 411
Query: 361 RR**LAGGPC 332
R* LA C
Sbjct: 410 GR*HLAWSFC 381
Score = 58.3 bits (121), Expect(2) = 3e-031
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +1 / +2
Query: 334 KGPQQAIICVFWYSG*VCSLPENSVPAGEVDSGRRVLPQELLQV 465
K +Q +IC+ W SG*+C L +N VP GE G R+LPQ LLQV
Sbjct: 383 KSSKQDVICLLWNSG*MCGLSKNRVPIGEAILGGRMLPQGLLQV 514
>gb|BM442464.2|BM442464 EBan01_SQ003_E04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_E04 5', mRNA sequence
Length = 507
Score = 329 bits (713), Expect = 1e-089
Identities = 128/143 (89%), Positives = 134/143 (93%)
Frame = +2 / +1
Query: 71 SFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
SFTGTQDKC+ C+KTVHFIDLLTADGV YHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH
Sbjct: 73 SFTGTQDKCSACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 252
Query: 251 FEQLFKETGSFSKNFTPGGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTL 430
FEQLFKETGSFSK FTPG KS DK ELTRAPSKLS+AFSGTQDKCAAC KTVYPLEK+TL
Sbjct: 253 FEQLFKETGSFSKKFTPGNKSGDKSELTRAPSKLSAAFSGTQDKCAACTKTVYPLEKMTL 432
Query: 431 EGESYHKSCFKCSHGGCILTTSS 499
EG++YHKSCFKCSHGGCIL SS
Sbjct: 433 EGDAYHKSCFKCSHGGCILPPSS 501
Score = 269 bits (581), Expect = 2e-071
Identities = 120/143 (83%), Positives = 123/143 (86%)
Frame = -1 / -2
Query: 498 EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSSPL 319
EE RMQPP EHLKQLLW SPSRV FSSGYTVF QAAHLS*VPE A DSLLGALVSS L
Sbjct: 500 EEGGRMQPPWEHLKQLLWYASPSRVIFSSGYTVFVQAAHLS*VPEKAADSLLGALVSSLL 321
Query: 318 SEDLPPGVKFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSA 139
S DL PGV F EKLPVSLKSCSK VLQ TPSMEE*LHIERIPLQWLHLK VLW*+TPSA
Sbjct: 320 SPDLLPGVNFFEKLPVSLKSCSKCVLQ*RTPSMEE*LHIERIPLQWLHLKQVLW*MTPSA 141
Query: 138 VRRSMKWTVLSHSAHLSCVPVKE 70
VRRSMKWTV SH+ HLSCVPVK+
Sbjct: 140 VRRSMKWTVFSHAEHLSCVPVKD 72
Score = 165 bits (355), Expect = 3e-040
Identities = 72/101 (71%), Positives = 83/101 (82%)
Frame = +1 / +3
Query: 163 DMLQVQPLQRDPLDVQLLFHGRCAVLQDPLRAALQGDRELLQELHARWQVFRQG*TDKGP 342
D+LQ+QPLQRDPLDVQL FHGRC +LQD LRAALQGDRELL+E+H Q++RQ *TDKGP
Sbjct: 165 DLLQMQPLQRDPLDVQLFFHGRCPLLQDALRAALQGDRELLKEVHTG*QIWRQE*TDKGP 344
Query: 343 QQAIICVFWYSG*VCSLPENSVPAGEVDSGRRVLPQELLQV 465
+QAI C+ YS *VCSL ENSV + DSG R +PQELLQV
Sbjct: 345 KQAIRCLLRYSR*VCSLHENSVSTRKDDSGGRCIPQELLQV 467
Score = 115 bits (245), Expect = 5e-025
Identities = 43/72 (59%), Positives = 58/72 (80%)
Frame = +2 / +1
Query: 359 AFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIH 538
+F+GTQDKC+AC+KTV+ ++ LT +G YHK+CFKCSH IL+ SY++++GVLYCK H
Sbjct: 73 SFTGTQDKCSACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 252
Query: 539 FAQLFMEKGSYS 574
F QLF E GS+S
Sbjct: 253 FEQLFKETGSFS 288
Score = 95.0 bits (201), Expect(2) = 7e-037
Identities = 39/61 (63%), Positives = 45/61 (73%)
Frame = -2 / -3
Query: 485 GCSPRAST*SSSCGRTRLPESTSPAGTLFSGKLHTYPEYQKTQMIACWGPLSVHPCLKTC 306
GCSPR ST*SSSCG R PES+ TLFS +LHTY EY++ Q IAC GPLSVH C + C
Sbjct: 487 GCSPRGST*SSSCGMHRPPESSFRVDTLFSCRLHTYLEYRRRQRIACLGPLSVHSCRQIC 308
Query: 305 H 303
+
Sbjct: 307 Y 305
Score = 87.7 bits (185), Expect(2) = 3e-027
Identities = 41/61 (67%), Positives = 45/61 (73%)
Frame = -3 / -1
Query: 484 DAAPVRALEAALVVGLAFQSQLLQRVHCFLASCTLILSTRKRR**LAGGPCQFTLV*RLA 305
DAAPV ALEAALVV +A QS L + +HCF A CTLILST + *LA GPCQFTLV R
Sbjct: 486 DAAPVGALEAALVVCIALQSHLFEWIHCFRAGCTLILSTGEGSG*LAWGPCQFTLVARFV 307
Query: 304 T 302
T
Sbjct: 306 T 304
Score = 79.4 bits (167), Expect(2) = 7e-037
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -3 / -1
Query: 235 QHTVHGRVAAHREDPFAVAALEACLMVGDAVGREEVDEVD 116
+ TVHGR+AAHREDPFAVAA EA L+V DAVGREEVDEVD
Sbjct: 237 EDTVHGRIAAHREDPFAVAAFEAGLVVDDAVGREEVDEVD 118
Score = 54.7 bits (113), Expect(2) = 3e-027
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / -3
Query: 230 HRPWKSSCTSRGSLCSGCT*SMS 162
HRPWK+SCTSRGSLCSGC *S S
Sbjct: 232 HRPWKNSCTSRGSLCSGCI*SRS 164
>gb|CK125568.1|CK125568 BES1824109b06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B069 5-PRIME, mRNA sequence
Length = 782
Score = 168 bits (362), Expect(2) = 3e-072
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 351 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 530
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 531 ALEGILYCKHHFSQLFKEKGSYNHLIK 611
Score = 123 bits (264), Expect(2) = 3e-072
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 54 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 233
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 234 EGVPYCKPHFAQLFKETGSYNKSF 305
Score = 116 bits (247), Expect(2) = 7e-046
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 607 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 428
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 427 VLPQVAHLSCVPENMPAALLGDLVSS 350
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +3
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 24 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 203
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 204 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 296
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 387 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 566
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 567 SQLFKEKGSYN 599
Score = 88.6 bits (187), Expect(2) = 7e-046
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 304 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 125
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 124 VLVHTLHFCCVPL 86
>gb|BQ765063.1|BQ765063 EBca01_SQ005_N18_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_N18 5', mRNA sequence
Length = 716
Score = 168 bits (362), Expect(2) = 3e-072
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 343 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 522
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 523 ALEGILYCKHHFSQLFKEKGSYNHLIK 603
Score = 123 bits (264), Expect(2) = 3e-072
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 46 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 225
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 226 EGVPYCKPHFAQLFKETGSYNKSF 297
Score = 116 bits (247), Expect(2) = 7e-046
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 599 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 420
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 419 VLPQVAHLSCVPENMPAALLGDLVSS 342
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +1
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 16 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 195
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 196 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 288
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 379 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 558
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 559 SQLFKEKGSYN 591
Score = 88.6 bits (187), Expect(2) = 7e-046
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 296 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 117
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 116 VLVHTLHFCCVPL 78
>gb|CA025095.1|CA025095 HZ51D05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D05
5-PRIME, mRNA sequence
Length = 587
Score = 168 bits (362), Expect(2) = 3e-072
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 322 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 501
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 502 ALEGILYCKHHFSQLFKEKGSYNHLIK 582
Score = 123 bits (264), Expect(2) = 3e-072
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 25 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 204
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 205 EGVPYCKPHFAQLFKETGSYNKSF 276
Score = 116 bits (247), Expect(2) = 7e-046
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 578 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 399
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 398 VLPQVAHLSCVPENMPAALLGDLVSS 321
Score = 109 bits (232), Expect = 3e-023
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2 / +1
Query: 353 SSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCK 532
++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H L+ SSY++ GV YCK
Sbjct: 46 ATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCK 225
Query: 533 IHFAQLFMEKGSYS 574
HFAQLF E GSY+
Sbjct: 226 PHFAQLFKETGSYN 267
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 358 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 537
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 538 SQLFKEKGSYN 570
Score = 88.6 bits (187), Expect(2) = 7e-046
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 275 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 96
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 95 VLVHTLHFCCVPL 57
>gb|CK123865.1|CK123865 BES1824105n21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N215 5-PRIME, mRNA sequence
Length = 823
Score = 168 bits (361), Expect(2) = 5e-072
Identities = 63/87 (72%), Positives = 74/87 (85%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 343 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 522
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY H++K
Sbjct: 523 ALEGILYCKHHFSQLFKEKGSYXHLIK 603
Score = 123 bits (264), Expect(2) = 5e-072
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 46 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 225
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 226 EGVPYCKPHFAQLFKETGSYNKSF 297
Score = 113 bits (242), Expect(2) = 3e-045
Identities = 55/86 (63%), Positives = 57/86 (66%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I W *LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 599 IRWX*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 420
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 419 VLPQVAHLSCVPENMPAALLGDLVSS 342
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +1
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 16 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 195
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 196 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 288
Score = 105 bits (224), Expect = 4e-022
Identities = 38/70 (54%), Positives = 53/70 (75%)
Frame = +2 / +1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 379 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 558
Query: 254 EQLFKETGSF 283
QLFKE GS+
Sbjct: 559 SQLFKEKGSY 588
Score = 88.6 bits (187), Expect(2) = 3e-045
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 296 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 117
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 116 VLVHTLHFCCVPL 78
>gb|AL505296.1|AL505296 AL505296 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08A11V 5', mRNA sequence
Length = 689
Score = 168 bits (362), Expect(2) = 7e-072
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 302 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 481
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 482 ALEGILYCKHHFSQLFKEKGSYNHLIK 562
Score = 122 bits (262), Expect(2) = 7e-072
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS +GV YCK HF
Sbjct: 35 FSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCKPHF 214
Query: 254 EQLFKETGSFSKNF 295
QLFKETGS++K+F
Sbjct: 215 AQLFKETGSYNKSF 256
Score = 116 bits (247), Expect(2) = 7e-046
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 558 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 379
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 378 VLPQVAHLSCVPENMPAALLGDLVSS 301
Score = 109 bits (232), Expect = 3e-023
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2 / +2
Query: 353 SSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCK 532
++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H L+ SSY++ GV YCK
Sbjct: 26 ATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCK 205
Query: 533 IHFAQLFMEKGSYS 574
HFAQLF E GSY+
Sbjct: 206 PHFAQLFKETGSYN 247
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 338 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 517
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 518 SQLFKEKGSYN 550
Score = 88.6 bits (187), Expect(2) = 7e-046
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 255 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 76
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 75 VLVHTLHFCCVPL 37
>gb|BJ463541.1|BJ463541 BJ463541 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g17 5', mRNA sequence
Length = 604
Score = 168 bits (362), Expect(2) = 4e-071
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 315 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 494
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 495 ALEGILYCKHHFSQLFKEKGSYNHLIK 575
Score = 120 bits (256), Expect(2) = 4e-071
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = +2 / +3
Query: 77 TGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFE 256
+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS +GV YCK HF
Sbjct: 51 SGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCKPHFA 230
Query: 257 QLFKETGSFSKNF 295
QLFKETGS++K+F
Sbjct: 231 QLFKETGSYNKSF 269
Score = 116 bits (247), Expect(2) = 7e-046
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 571 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 392
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 391 VLPQVAHLSCVPENMPAALLGDLVSS 314
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 351 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 530
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 531 SQLFKEKGSYN 563
Score = 105 bits (225), Expect = 3e-022
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +2 / +3
Query: 365 SGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFA 544
SGTQ KC C KTVYP+++L+ +G +H++CFKC H L+ SSY++ GV YCK HFA
Sbjct: 51 SGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCKPHFA 230
Query: 545 QLFMEKGSYS 574
QLF E GSY+
Sbjct: 231 QLFKETGSYN 260
Score = 88.6 bits (187), Expect(2) = 7e-046
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 268 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 89
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 88 VLVHTLHFCCVPL 50
>gb|BI950605.1|BI950605 HVSMEl0021J24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0021J24f, mRNA sequence
Length = 865
Score = 160 bits (344), Expect(2) = 5e-069
Identities = 60/84 (71%), Positives = 69/84 (82%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 373 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSASNYA 552
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSH 577
A +LYCK HF+QLF EKGSY H
Sbjct: 553 AFGSILYCKPHFSQLFREKGSYQH 624
Score = 121 bits (259), Expect(2) = 5e-069
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D + DG +H+ CFKC HCK LS SYSS
Sbjct: 76 RETTATAATMFSGTQQKCKVCTKTVYPMDQVCTDGAVFHRACFKCHHCKSTLSFSSYSSF 255
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 256 EGVPYCKPHFAQLFKETGSYNKSF 327
Score = 109 bits (232), Expect = 3e-023
Identities = 41/91 (45%), Positives = 59/91 (64%)
Frame = +2 / +1
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP++++ +G +H++CFKC H
Sbjct: 46 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQVCTDGAVFHRACFKCHHCKS 225
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 226 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 318
Score = 102 bits (218), Expect(2) = 9e-042
Identities = 52/82 (63%), Positives = 54/82 (65%)
Frame = -1 / -3
Query: 570 *LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQ 391
*LPFS+ SC KW LQ R AA* E R QPP EHLKQ LW*D S V FS GY V Q
Sbjct: 617 *LPFSLKSCEKWGLQ*RMLPKAA*LEAERAQPP*EHLKQDLW*DFSSTVTFSRGYAVLPQ 438
Query: 390 AAHLS*VPENADDSLLGALVSS 325
AHLS VPEN +LLG LVSS
Sbjct: 437 VAHLSCVPENMPAALLGDLVSS 372
Score = 88.1 bits (186), Expect(2) = 9e-042
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 326 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVHTWSMG*T 147
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 146 VLVHTLHFCCVPL 108
>gb|AV926936.1|AV926936 AV926936 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26c07 5', mRNA sequence
Length = 733
Score = 146 bits (313), Expect(2) = 2e-065
Identities = 55/76 (72%), Positives = 64/76 (84%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ +YA
Sbjct: 485 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPFNYA 664
Query: 506 ALNGVLYCKIHFAQLF 553
AL G+LYCK HF+QLF
Sbjct: 665 ALEGILYCKHHFSQLF 712
Score = 123 bits (264), Expect(2) = 2e-065
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 188 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 367
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 368 EGVPYCKPHFAQLFKETGSYNKSF 439
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +2
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 158 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 337
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 338 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 430
Score = 95.9 bits (203), Expect(2) = 7e-040
Identities = 47/77 (61%), Positives = 50/77 (64%)
Frame = -1 / -2
Query: 555 MNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS 376
+ SC KW LQ R P AA* + R QPP EHLKQ LW*D S V FS GY V Q AHLS
Sbjct: 714 LKSCEKWCLQ*RMPSKAA*LKGERAQPP*EHLKQDLW*DFSSTVTFSRGYAVLPQVAHLS 535
Query: 375 *VPENADDSLLGALVSS 325
VPEN +LLG LVSS
Sbjct: 534 CVPENMPAALLGDLVSS 484
Score = 88.6 bits (187), Expect(2) = 7e-040
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 438 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 259
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 258 VLVHTLHFCCVPL 220
>gb|BM369644.2|BM369644 EBem07_SQ004_D10_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_D10 5', mRNA sequence
Length = 512
Score = 146 bits (313), Expect(2) = 3e-065
Identities = 55/75 (73%), Positives = 64/75 (85%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 286 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 465
Query: 506 ALNGVLYCKIHFAQL 550
AL G+LYCK HF+QL
Sbjct: 466 ALEGILYCKHHFSQL 510
Score = 122 bits (262), Expect(2) = 3e-065
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = +2 / +1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS +GV YCK HF
Sbjct: 19 FSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCKPHF 198
Query: 254 EQLFKETGSFSKNF 295
QLFKETGS++K+F
Sbjct: 199 AQLFKETGSYNKSF 240
Score = 109 bits (232), Expect = 3e-023
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2 / +1
Query: 353 SSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCK 532
++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H L+ SSY++ GV YCK
Sbjct: 10 ATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCK 189
Query: 533 IHFAQLFMEKGSYS 574
HFAQLF E GSY+
Sbjct: 190 PHFAQLFKETGSYN 231
Score = 96.8 bits (205), Expect(2) = 4e-040
Identities = 48/75 (64%), Positives = 49/75 (65%)
Frame = -1 / -1
Query: 549 SCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*V 370
SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY V Q AHLS V
Sbjct: 509 SCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYAVLPQVAHLSCV 330
Query: 369 PENADDSLLGALVSS 325
PEN +LLG LVSS
Sbjct: 329 PENMPAALLGDLVSS 285
Score = 88.6 bits (187), Expect(2) = 4e-040
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 239 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 60
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 59 VLVHTLHFCCVPL 21
>gb|BG300145.1|BG300145 HVSMEb0010G24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010G24f, mRNA sequence
Length = 517
Score = 144 bits (308), Expect(2) = 2e-064
Identities = 54/75 (72%), Positives = 63/75 (84%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 291 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 470
Query: 506 ALNGVLYCKIHFAQL 550
A G+LYCK HF+QL
Sbjct: 471 AXEGILYCKHHFSQL 515
Score = 122 bits (262), Expect(2) = 2e-064
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS +GV YCK HF
Sbjct: 24 FSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCKPHF 203
Query: 254 EQLFKETGSFSKNF 295
QLFKETGS++K+F
Sbjct: 204 AQLFKETGSYNKSF 245
Score = 109 bits (232), Expect = 3e-023
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2 / +3
Query: 353 SSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCK 532
++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H L+ SSY++ GV YCK
Sbjct: 15 ATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCK 194
Query: 533 IHFAQLFMEKGSYS 574
HFAQLF E GSY+
Sbjct: 195 PHFAQLFKETGSYN 236
Score = 96.8 bits (205), Expect(2) = 4e-040
Identities = 48/75 (64%), Positives = 49/75 (65%)
Frame = -1 / -1
Query: 549 SCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*V 370
SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY V Q AHLS V
Sbjct: 514 SCEKWCLQ*RMPSXAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYAVLPQVAHLSCV 335
Query: 369 PENADDSLLGALVSS 325
PEN +LLG LVSS
Sbjct: 334 PENMPAALLGDLVSS 290
Score = 88.6 bits (187), Expect(2) = 4e-040
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 244 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 65
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 64 VLVHTLHFCCVPL 26
>gb|BM372397.2|BM372397 EBro03_SQ004_N12_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_N12 5', mRNA sequence
Length = 581
Score = 168 bits (362), Expect(2) = 8e-064
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 212 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 391
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 392 ALEGILYCKHHFSQLFKEKGSYNHLIK 472
Score = 116 bits (247), Expect(2) = 7e-040
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 468 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 289
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 288 VLPQVAHLSCVPENMPAALLGDLVSS 211
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 248 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 427
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 428 SQLFKEKGSYN 460
Score = 95.9 bits (203), Expect(2) = 8e-064
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +2 / +2
Query: 134 LTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
L+ DG +H+ CFKC HCK LS SYSS +GV YCK HF QLFKETGS++K+F
Sbjct: 5 LSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSF 166
Score = 68.4 bits (143), Expect(2) = 7e-040
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPS 142
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS
Sbjct: 165 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPS 13
>gb|AL506237.1|AL506237 AL506237 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02H15T 5',
mRNA sequence
Length = 697
Score = 128 bits (274), Expect(2) = 2e-059
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +3
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 39 GEAXATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGV 218
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 219 LYCRPHFDQLFKRTGSLDKSF 281
Score = 121 bits (259), Expect(2) = 2e-059
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / +3
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 339 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 518
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 519 CKHHHTQLIKEKGNFSQL 572
Score = 83.5 bits (176), Expect(2) = 3e-029
Identities = 43/82 (52%), Positives = 50/82 (60%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 280 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 101
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E +P+
Sbjct: 100 VLSQALHLVVVPWNEVAXASPS 35
Score = 65.2 bits (136), Expect(2) = 3e-029
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -1
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 577 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 398
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 397 TVLLHPKHFSLVPANALETLI 335
>gb|BQ464047.1|BQ464047 HF01D07T HF Hordeum vulgare subsp. vulgare cDNA clone HF01D07
5-PRIME, mRNA sequence
Length = 679
Score = 127 bits (273), Expect(2) = 3e-059
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +2
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 98 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGV 277
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 278 LYCRPHFDQLFKRTGSLDKSF 340
Score = 121 bits (259), Expect(2) = 3e-059
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / +2
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 398 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 577
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 578 CKHHHTQLIKEKGNFSQL 631
Score = 85.4 bits (180), Expect(2) = 9e-030
Identities = 43/82 (52%), Positives = 51/82 (62%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 339 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 160
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 159 VLSQALHLVVVPWNEVAIASPS 94
Score = 65.2 bits (136), Expect(2) = 9e-030
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -2
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 636 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 457
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 456 TVLLHPKHFSLVPANALETLI 394
>gb|BJ463425.1|BJ463425 BJ463425 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27k10 5', mRNA sequence
Length = 634
Score = 127 bits (273), Expect(2) = 3e-059
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +2
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 83 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGV 262
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 263 LYCRPHFDQLFKRTGSLDKSF 325
Score = 121 bits (259), Expect(2) = 3e-059
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / +2
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 383 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 562
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 563 CKHHHTQLIKEKGNFSQL 616
Score = 85.4 bits (180), Expect(2) = 9e-030
Identities = 43/82 (52%), Positives = 51/82 (62%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 324 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 145
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 144 VLSQALHLVVVPWNEVAIASPS 79
Score = 65.2 bits (136), Expect(2) = 9e-030
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -2
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 621 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 442
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 441 TVLLHPKHFSLVPANALETLI 379
>gb|BQ460388.1|BQ460388 HA09M17r HA Hordeum vulgare subsp. vulgare cDNA clone HA09M17
5-PRIME, mRNA sequence
Length = 635
Score = 127 bits (273), Expect(2) = 3e-059
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +2
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 53 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGV 232
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 233 LYCRPHFDQLFKRTGSLDKSF 295
Score = 121 bits (259), Expect(2) = 3e-059
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / +2
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 353 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 532
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 533 CKHHHTQLIKEKGNFSQL 586
Score = 85.4 bits (180), Expect(2) = 9e-030
Identities = 43/82 (52%), Positives = 51/82 (62%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 294 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 115
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 114 VLSQALHLVVVPWNEVAIASPS 49
Score = 65.2 bits (136), Expect(2) = 9e-030
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -3
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 591 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 412
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 411 TVLLHPKHFSLVPANALETLI 349
>gb|BU997945.1|BU997945 HI09I01r HI Hordeum vulgare subsp. vulgare cDNA clone HI09I01
5-PRIME, mRNA sequence
Length = 584
Score = 127 bits (273), Expect(2) = 3e-059
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +3
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 36 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGV 215
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 216 LYCRPHFDQLFKRTGSLDKSF 278
Score = 121 bits (259), Expect(2) = 3e-059
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / +3
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 336 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 515
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 516 CKHHHTQLIKEKGNFSQL 569
Score = 85.4 bits (180), Expect(2) = 9e-030
Identities = 43/82 (52%), Positives = 51/82 (62%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 277 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 98
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 97 VLSQALHLVVVPWNEVAIASPS 32
Score = 65.2 bits (136), Expect(2) = 9e-030
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -2
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 574 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 395
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 394 TVLLHPKHFSLVPANALETLI 332
>gb|CA032315.1|CA032315 HX12K14r HX Hordeum vulgare subsp. vulgare cDNA clone HX12K14
5-PRIME, mRNA sequence
Length = 666
Score = 123 bits (264), Expect(2) = 9e-059
Identities = 47/64 (73%), Positives = 54/64 (84%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 475 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 654
Query: 506 ALNG 517
AL G
Sbjct: 655 ALEG 666
Score = 123 bits (264), Expect(2) = 9e-059
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 178 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 357
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 358 EGVPYCKPHFAQLFKETGSYNKSF 429
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +1
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 148 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 327
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 328 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 420
Score = 88.6 bits (187), Expect(2) = 3e-035
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 428 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 249
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 248 VLVHTLHFCCVPL 210
Score = 80.3 bits (169), Expect(2) = 3e-035
Identities = 41/64 (64%), Positives = 42/64 (65%)
Frame = -1 / -2
Query: 516 PLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGA 337
P AA* E R QPP EHLKQ LW*D S V FS GY V Q AHLS VPEN +LLG
Sbjct: 665 PSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYAVLPQVAHLSCVPENMPAALLGD 486
Query: 336 LVSS 325
LVSS
Sbjct: 485 LVSS 474
>gb|BJ476245.1|BJ476245 BJ476245 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33a06 3', mRNA sequence
Length = 688
Score = 168 bits (362), Expect(2) = 2e-058
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / -2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 516 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 337
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 336 ALEGILYCKHHFSQLFKEKGSYNHLIK 256
Score = 116 bits (247), Expect(2) = 1e-037
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / +2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 260 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 439
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 440 VLPQVAHLSCVPENMPAALLGDLVSS 517
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / -2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 480 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 301
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 300 SQLFKEKGSYN 268
Score = 78.0 bits (164), Expect(2) = 2e-058
Identities = 29/42 (69%), Positives = 33/42 (78%)
Frame = +2 / -2
Query: 170 FKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
FKC HCK LS SYSS +GV YCK HF QLFKETGS++K+F
Sbjct: 687 FKCHHCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSF 562
Score = 61.1 bits (127), Expect(2) = 1e-037
Identities = 28/42 (66%), Positives = 30/42 (71%)
Frame = -1 / +2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLK 169
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK
Sbjct: 563 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLK 688
>gb|BM376791.2|BM376791 EBem05_SQ003_E02_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_E02 5', mRNA sequence
Length = 646
Score = 125 bits (268), Expect(2) = 2e-058
Identities = 45/81 (55%), Positives = 57/81 (70%)
Frame = +2 / +1
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD +HK CF+C HCKG L + +Y+S +GV
Sbjct: 52 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVHHKACFRCHHCKGTLKLANYNSFEGV 231
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 232 LYCRPHFDQLFKRTGSLDKSF 294
Score = 121 bits (258), Expect(2) = 2e-058
Identities = 43/78 (55%), Positives = 57/78 (73%)
Frame = +2 / +1
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 352 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 531
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG +S +
Sbjct: 532 CKHHHTQLIKEKGKFSQL 585
Score = 83.1 bits (175), Expect(2) = 4e-029
Identities = 42/82 (51%), Positives = 50/82 (60%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW SAV S ++T
Sbjct: 293 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALWWTRLSAVSLSTRYT 114
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 113 VLSQALHLVVVPWNEVAIASPS 48
Score = 65.2 bits (136), Expect(2) = 4e-029
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -3
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 590 FSSWLNFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 411
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 410 TVLLHPKHFSLVPANALETLI 348
>gb|AW982205.2|AW982205 HVSMEg0002E10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002E10f, mRNA sequence
Length = 828
Score = 127 bits (273), Expect(2) = 6e-057
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +1
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 163 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGV 342
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 343 LYCRPHFDQLFKRTGSLDKSF 405
Score = 113 bits (242), Expect(2) = 6e-057
Identities = 42/87 (48%), Positives = 58/87 (66%)
Frame = +2 / +1
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC + S+ + G L+
Sbjct: 463 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTIHPSNTSPTKGKLF 642
Query: 527 CKIHFAQLFMEKGSYSHMMKKSPSQDT 607
CK H QL EKG + ++S + T
Sbjct: 643 CKHHHTQLVKEKGKFXPXRERSRTDVT 723
Score = 85.4 bits (180), Expect(2) = 3e-027
Identities = 43/82 (52%), Positives = 51/82 (62%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 404 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 225
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 224 VLSQALHLVVVPWNEVAIASPS 159
Score = 57.0 bits (118), Expect(2) = 3e-027
Identities = 31/74 (41%), Positives = 37/74 (50%)
Frame = -1 / -2
Query: 564 PFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAA 385
PFS+ S W LQ P E +QPP +HLKQLLW V S G TV
Sbjct: 680 PFSLTSWVWWCLQKSLPFVGDVFEG*MVQPPWQHLKQLLWYMVLLTVTLSIG*TVLLHPK 501
Query: 384 HLS*VPENADDSLL 343
H S VP NA ++L+
Sbjct: 500 HFSLVPANALETLI 459
>gb|BM377129.2|BM377129 EBem05_SQ004_D11_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_D11 5', mRNA sequence
Length = 625
Score = 123 bits (264), Expect(2) = 8e-057
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 147 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 326
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 327 EGVPYCKPHFAQLFKETGSYNKSF 398
Score = 117 bits (250), Expect(2) = 8e-057
Identities = 44/60 (73%), Positives = 51/60 (85%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 444 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 623
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +3
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 117 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 296
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 297 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 389
Score = 88.6 bits (187), Expect(2) = 2e-034
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 397 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 218
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 217 VLVHTLHFCCVPL 179
Score = 78.0 bits (164), Expect(2) = 2e-034
Identities = 40/61 (65%), Positives = 41/61 (67%)
Frame = -1 / -1
Query: 507 AA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVS 328
AA* E R QPP EHLKQ LW*D S V FS GY V Q AHLS VPEN +LLG LVS
Sbjct: 625 AA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYAVLPQVAHLSCVPENMPAALLGDLVS 446
Query: 327 S 325
S
Sbjct: 445 S 443
>gb|BE216049.2|BE216049 HV_CEb0009E03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009E03f, mRNA sequence
Length = 652
Score = 168 bits (362), Expect(2) = 7e-056
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 181 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 360
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 361 ALEGILYCKHHFSQLFKEKGSYNHLIK 441
Score = 116 bits (247), Expect(2) = 1e-035
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 437 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 258
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 257 VLPQVAHLSCVPENMPAALLGDLVSS 180
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 217 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 396
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 397 SQLFKEKGSYN 429
Score = 69.3 bits (145), Expect(2) = 7e-056
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +2 / +1
Query: 182 HCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
HCK LS SYSS +GV YCK HF QLFKETGS++K+F
Sbjct: 22 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSF 135
Score = 54.2 bits (112), Expect(2) = 1e-035
Identities = 25/38 (65%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQW 181
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW
Sbjct: 134 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQW 21
>gb|BQ471999.1|BQ471999 HV04C01r HV Hordeum vulgare subsp. vulgare cDNA clone HV04C01
5-PRIME, mRNA sequence
Length = 572
Score = 127 bits (273), Expect(2) = 7e-056
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +2
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 62 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGV 241
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 242 LYCRPHFDQLFKRTGSLDKSF 304
Score = 110 bits (234), Expect(2) = 7e-056
Identities = 39/68 (57%), Positives = 51/68 (75%)
Frame = +2 / +2
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 362 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 541
Query: 527 CKIHFAQL 550
CK H QL
Sbjct: 542 CKHHHTQL 565
Score = 85.4 bits (180), Expect(2) = 8e-026
Identities = 43/82 (52%), Positives = 51/82 (62%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 303 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 124
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 123 VLSQALHLVVVPWNEVAIASPS 58
Score = 51.9 bits (107), Expect(2) = 8e-026
Identities = 28/65 (43%), Positives = 34/65 (52%)
Frame = -1 / -3
Query: 537 WILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENA 358
W LQ P A * E + + PP +HLKQLLW V S G TV H S VP NA
Sbjct: 552 WCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG*TVLLHPKHFSLVPANA 373
Query: 357 DDSLL 343
++L+
Sbjct: 372 LETLI 358
>gb|BQ764615.1|BQ764615 EBca01_SQ004_K11_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_K11 5', mRNA sequence
Length = 746
Score = 121 bits (259), Expect(3) = 9e-055
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / +3
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 297 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 476
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 477 CKHHHTQLIKEKGNFSQL 530
Score = 88.6 bits (187), Expect(3) = 9e-055
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = +2 / +3
Query: 155 YHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
YHK CF+C HCKG L + +Y+S +GVLYC+ HF+QLFK TGS K+F
Sbjct: 99 YHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 239
Score = 65.2 bits (136), Expect(3) = 6e-025
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -2
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 535 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 356
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 355 TVLLHPKHFSLVPANALETLI 293
Score = 58.8 bits (122), Expect(3) = 6e-025
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW* 154
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW*
Sbjct: 238 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW* 98
Score = 42.8 bits (87), Expect(3) = 9e-055
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2 / +2
Query: 68 SSFTGTQDKCAECDKTVHFIDLLTAD 145
+SF GT KC CDKTV+ +D LTAD
Sbjct: 11 TSFQGTTTKCNACDKTVYLVDKLTAD 88
Score = 28.1 bits (55), Expect(3) = 6e-025
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1 / -3
Query: 144 SAVRRSMKWTVLSHSAHLSCVPVKE 70
SAV S ++TVLS + HL VP E
Sbjct: 87 SAVSLSTRYTVLSQALHLVVVPWNE 13
>gb|BM373914.2|BM373914 EBma03_SQ003_B17_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_B17 5', mRNA sequence
Length = 631
Score = 125 bits (268), Expect(3) = 2e-054
Identities = 46/81 (56%), Positives = 56/81 (69%)
Frame = +2 / +1
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF C HCKG L + +Y+S +GV
Sbjct: 55 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFWCHHCKGTLKLANYNSFEGV 234
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 235 LYCRPHFDQLFKRTGSLDKSF 297
Score = 82.6 bits (174), Expect(3) = 9e-024
Identities = 42/82 (51%), Positives = 50/82 (60%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW H K LW* SAV S ++T
Sbjct: 296 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHQKQALW*TRLSAVSLSTRYT 117
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 116 VLSQALHLVVVPWNEVAIASPS 51
Score = 79.9 bits (168), Expect(3) = 2e-054
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +2 / +1
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHG 475
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HG
Sbjct: 355 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHG 483
Score = 46.4 bits (95), Expect(3) = 2e-054
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 473 GGCILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
GGC ++ S+Y A G L+CK H QL EKG++S
Sbjct: 482 GGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFS 583
Score = 39.1 bits (79), Expect(3) = 9e-024
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = -1 / -3
Query: 474 PCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLL 343
P +HLKQLLW V S G TV H S VP NA ++L+
Sbjct: 482 PWQHLKQLLWYMVLLTVTLSIG*TVLLHPKHFSLVPANALETLI 351
Score = 26.3 bits (51), Expect(3) = 9e-024
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1 / -2
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPP 472
F L PFS+ S W LQ P A * E + + PP
Sbjct: 594 FSSGLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPP 481
>gb|BQ469637.1|BQ469637 HZ01G16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01G16
5-PRIME, mRNA sequence
Length = 509
Score = 123 bits (264), Expect(2) = 2e-051
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 64 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 243
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 244 EGVPYCKPHFAQLFKETGSYNKSF 315
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +1
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 34 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 213
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 214 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 306
Score = 99.1 bits (210), Expect(2) = 2e-051
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSH 472
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSH
Sbjct: 361 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSH 507
Score = 88.6 bits (187), Expect(2) = 2e-031
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 314 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 135
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 134 VLVHTLHFCCVPL 96
Score = 68.0 bits (142), Expect(2) = 2e-031
Identities = 33/50 (66%), Positives = 34/50 (68%)
Frame = -1 / -1
Query: 474 PCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSS 325
P EHLKQ LW*D S V FS GY V Q AHLS VPEN +LLG LVSS
Sbjct: 509 P*EHLKQDLW*DFSSTVTFSRGYAVLPQVAHLSCVPENMPAALLGDLVSS 360
>gb|BM376958.2|BM376958 EBem05_SQ003_L10_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_L10 5', mRNA sequence
Length = 464
Score = 127 bits (271), Expect(2) = 8e-051
Identities = 45/76 (59%), Positives = 56/76 (73%)
Frame = +2 / +3
Query: 68 SSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 247
+SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GVLYC+
Sbjct: 15 TSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRP 194
Query: 248 HFEQLFKETGSFSKNF 295
HF+QLFK TGS K+F
Sbjct: 195 HFDQLFKRTGSLDKSF 242
Score = 94.1 bits (199), Expect(2) = 8e-051
Identities = 32/54 (59%), Positives = 43/54 (79%)
Frame = +2 / +3
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAA 508
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A
Sbjct: 300 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIA 461
Score = 82.2 bits (173), Expect(2) = 2e-022
Identities = 42/75 (56%), Positives = 47/75 (62%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 241 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 62
Query: 114 VLSHSAHLSCVPVKE 70
VLS + HL VP E
Sbjct: 61 VLSQALHLVVVPWNE 17
Score = 44.1 bits (90), Expect(2) = 2e-022
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = -1 / -2
Query: 507 AA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLL 343
A * E + + PP +HLKQLLW V S G TV H S VP NA ++L+
Sbjct: 460 AM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG*TVLLHPKHFSLVPANALETLI 296
>gb|BI776278.2|BI776278 EBem04_SQ001_F10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_F10 5', mRNA sequence
Length = 662
Score = 168 bits (362), Expect(2) = 2e-050
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 135 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 314
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 315 ALEGILYCKHHFSQLFKEKGSYNHLIK 395
Score = 116 bits (247), Expect(2) = 2e-031
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 391 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 212
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 211 VLPQVAHLSCVPENMPAALLGDLVSS 134
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 171 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 350
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 351 SQLFKEKGSYN 383
Score = 51.5 bits (106), Expect(2) = 2e-050
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2 / +3
Query: 209 SYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
SYSS +GV Y K HF QLFKETGS++K+F
Sbjct: 3 SYSSFEGVPYWKPHFAQLFKETGSYNKSF 89
Score = 40.5 bits (82), Expect(2) = 2e-031
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*L 208
K L LPVSL SC+KW Q TPS EE*L
Sbjct: 88 KLLL*LPVSLNSCAKWGFQ*GTPSNEE*L 2
>gb|BU996702.1|BU996702 HM14H14r HM Hordeum vulgare subsp. vulgare cDNA clone HM14H14
5-PRIME, mRNA sequence
Length = 558
Score = 123 bits (264), Expect(2) = 3e-050
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +3
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 117 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 296
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 297 EGVPYCKPHFAQLFKETGSYNKSF 368
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +3
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 87 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 266
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 267 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 359
Score = 95.5 bits (202), Expect(2) = 3e-050
Identities = 36/48 (75%), Positives = 41/48 (85%)
Frame = +2 / +3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCS 469
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCS
Sbjct: 414 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCS 557
Score = 88.6 bits (187), Expect(2) = 4e-031
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 367 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 188
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 187 VLVHTLHFCCVPL 149
Score = 66.6 bits (139), Expect(2) = 4e-031
Identities = 32/48 (66%), Positives = 33/48 (68%)
Frame = -1 / -3
Query: 468 EHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSS 325
EHLKQ LW*D S V FS GY V Q AHLS VPEN +LLG LVSS
Sbjct: 556 EHLKQDLW*DFSSTVTFSRGYAVLPQVAHLSCVPENMPAALLGDLVSS 413
>gb|BQ764551.1|BQ764551 EBca01_SQ004_O06_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_O06 5', mRNA sequence
Length = 646
Score = 168 bits (362), Expect(2) = 2e-049
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 119 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 298
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 299 ALEGILYCKHHFSQLFKEKGSYNHLIK 379
Score = 116 bits (247), Expect(2) = 3e-030
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 375 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 196
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 195 VLPQVAHLSCVPENMPAALLGDLVSS 118
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 155 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 334
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 335 SQLFKEKGSYN 367
Score = 47.8 bits (98), Expect(2) = 2e-049
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 2 EGVPYCKPHFAQLFKETGSYNKSF 73
Score = 36.3 bits (73), Expect(2) = 3e-030
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPS 223
K L LPVSL SC+KW LQ TPS
Sbjct: 72 KLLL*LPVSLNSCAKWGLQ*GTPS 1
>gb|BJ466489.1|BJ466489 BJ466489 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g17 3', mRNA sequence
Length = 619
Score = 168 bits (362), Expect(2) = 2e-049
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / -2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 501 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 322
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 321 ALEGILYCKHHFSQLFKEKGSYNHLIK 241
Score = 116 bits (247), Expect(2) = 1e-030
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / +2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 245 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 424
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 425 VLPQVAHLSCVPENMPAALLGDLVSS 502
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / -2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 465 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 286
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 285 SQLFKEKGSYN 253
Score = 47.8 bits (98), Expect(2) = 2e-049
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 618 EGVPYCKPHFAQLFKETGSYNKSF 547
Score = 37.7 bits (76), Expect(2) = 1e-030
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / +2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPS 223
K L LPVSL SC+KW LQ TPS
Sbjct: 548 KLLL*LPVSLNSCAKWGLQXGTPS 619
>gb|BJ476665.1|BJ476665 BJ476665 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal36f06 3', mRNA sequence
Length = 620
Score = 168 bits (362), Expect(2) = 2e-049
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / -1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 500 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 321
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 320 ALEGILYCKHHFSQLFKEKGSYNHLIK 240
Score = 116 bits (247), Expect(2) = 3e-030
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / +1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 244 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 423
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 424 VLPQVAHLSCVPENMPAALLGDLVSS 501
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / -1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 464 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 285
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 284 SQLFKEKGSYN 252
Score = 47.8 bits (98), Expect(2) = 2e-049
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 617 EGVPYCKPHFAQLFKETGSYNKSF 546
Score = 36.3 bits (73), Expect(2) = 3e-030
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / +1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPS 223
K L LPVSL SC+KW LQ TPS
Sbjct: 547 KLLL*LPVSLNSCAKWGLQ*GTPS 618
>gb|BU988629.1|BU988629 HF18D11r HF Hordeum vulgare subsp. vulgare cDNA clone HF18D11
5-PRIME, mRNA sequence
Length = 631
Score = 127 bits (273), Expect(2) = 4e-049
Identities = 46/81 (56%), Positives = 57/81 (70%)
Frame = +2 / +3
Query: 53 GVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGV 232
G +SF GT KC CDKTV+ +D LTAD YHK CF+C HCKG L + +Y+S +GV
Sbjct: 183 GEAMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGV 362
Query: 233 LYCKTHFEQLFKETGSFSKNF 295
LYC+ HF+QLFK TGS K+F
Sbjct: 363 LYCRPHFDQLFKRTGSLDKSF 425
Score = 87.7 bits (185), Expect(2) = 4e-049
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +2 / +3
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILT 490
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++
Sbjct: 483 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTIS 626
Score = 85.4 bits (180), Expect(2) = 2e-023
Identities = 43/82 (52%), Positives = 51/82 (62%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SAV S ++T
Sbjct: 424 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYT 245
Query: 114 VLSHSAHLSCVPVKEDMVPTPA 49
VLS + HL VP E + +P+
Sbjct: 244 VLSQALHLVVVPWNEVAIASPS 179
Score = 43.7 bits (89), Expect(2) = 2e-023
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -1 / -1
Query: 495 EVVRMQPPCEHLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLL 343
E + + PP +HLKQLLW V S G TV H S VP NA ++L+
Sbjct: 631 EGLMVHPPWQHLKQLLWYMVLLTVTLSIG*TVLLHPKHFSLVPANALETLI 479
>gb|AV919448.1|AV919448 AV919448 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b09 3', mRNA sequence
Length = 687
Score = 121 bits (259), Expect(2) = 2e-048
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / -3
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 472 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 293
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 292 CKHHHTQLIKEKGNFSQL 239
Score = 91.8 bits (194), Expect(2) = 2e-048
Identities = 31/52 (59%), Positives = 39/52 (75%)
Frame = +2 / -3
Query: 140 ADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
AD YHK CF+C HCKG L + +Y+S +GVLYC+ HF+QLFK TGS K+F
Sbjct: 685 ADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 530
Score = 65.2 bits (136), Expect(2) = 2e-022
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / +3
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 234 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 413
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 414 TVLLHPKHFSLVPANALETLI 476
Score = 60.6 bits (126), Expect(2) = 2e-022
Identities = 31/52 (59%), Positives = 33/52 (63%)
Frame = -1 / +3
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSA 139
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW* SA
Sbjct: 531 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSA 686
>gb|AL505692.1|AL505692 AL505692 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09D21V 5', mRNA sequence
Length = 470
Score = 123 bits (264), Expect(2) = 2e-048
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 34 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 213
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 214 EGVPYCKPHFAQLFKETGSYNKSF 285
Score = 109 bits (232), Expect = 3e-023
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2 / +1
Query: 353 SSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCK 532
++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H L+ SSY++ GV YCK
Sbjct: 55 ATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCK 234
Query: 533 IHFAQLFMEKGSYS 574
HFAQLF E GSY+
Sbjct: 235 PHFAQLFKETGSYN 276
Score = 89.5 bits (189), Expect(2) = 2e-048
Identities = 34/46 (73%), Positives = 39/46 (84%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFK 463
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFK
Sbjct: 331 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFK 468
Score = 88.6 bits (187), Expect(2) = 2e-030
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 284 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 105
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 104 VLVHTLHFCCVPL 66
Score = 64.3 bits (134), Expect(2) = 2e-030
Identities = 31/47 (65%), Positives = 32/47 (68%)
Frame = -1 / -1
Query: 465 HLKQLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSS 325
HLKQ LW*D S V FS GY V Q AHLS VPEN +LLG LVSS
Sbjct: 470 HLKQDLW*DFSSTVTFSRGYAVLPQVAHLSCVPENMPAALLGDLVSS 330
>gb|AV918472.1|AV918472 AV918472 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21c22 3', mRNA sequence
Length = 668
Score = 121 bits (259), Expect(2) = 2e-047
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / -3
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 462 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 283
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 282 CKHHHTQLIKEKGNFSQL 229
Score = 88.6 bits (187), Expect(2) = 2e-047
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = +2 / -3
Query: 155 YHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
YHK CF+C HCKG L + +Y+S +GVLYC+ HF+QLFK TGS K+F
Sbjct: 660 YHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 520
Score = 65.2 bits (136), Expect(2) = 7e-022
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / +2
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 224 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 403
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 404 TVLLHPKHFSLVPANALETLI 466
Score = 58.8 bits (122), Expect(2) = 7e-022
Identities = 29/47 (61%), Positives = 31/47 (65%)
Frame = -1 / +2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW* 154
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW*
Sbjct: 521 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW* 661
>gb|BJ465856.1|BJ465856 BJ465856 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27k10 3', mRNA sequence
Length = 658
Score = 121 bits (259), Expect(2) = 2e-046
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / -3
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 461 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 282
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 281 CKHHHTQLIKEKGNFSQL 228
Score = 84.9 bits (179), Expect(2) = 2e-046
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +2 / -3
Query: 158 HKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
HK CF+C HCKG L + +Y+S +GVLYC+ HF+QLFK TGS K+F
Sbjct: 656 HKACFRCHHCKGTLKLANYNSXEGVLYCRPHFDQLFKRTGSLDKSF 519
Score = 65.2 bits (136), Expect(2) = 1e-021
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / +1
Query: 585 FIMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGY 406
F WL PFS+ S W LQ P A * E + + PP +HLKQLLW V S G
Sbjct: 223 FSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG* 402
Query: 405 TVFWQAAHLS*VPENADDSLL 343
TV H S VP NA ++L+
Sbjct: 403 TVLLHPKHFSLVPANALETLI 465
Score = 58.3 bits (121), Expect(2) = 1e-021
Identities = 28/46 (60%), Positives = 30/46 (65%)
Frame = -1 / +1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW 157
K L +LPV LKS SK LQ STPS E * R+PLQW HLK LW
Sbjct: 520 KLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW 657
>gb|AV931773.1|AV931773 AV931773 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26c07 3', mRNA sequence
Length = 668
Score = 168 bits (362), Expect(2) = 5e-046
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / -3
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 561 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 382
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 381 ALEGILYCKHHFSQLFKEKGSYNHLIK 301
Score = 116 bits (247), Expect(2) = 7e-028
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / +2
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 305 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 484
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 485 VLPQVAHLSCVPENMPAALLGDLVSS 562
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / -3
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 525 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 346
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 345 SQLFKEKGSYN 313
Score = 36.3 bits (73), Expect(2) = 5e-046
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2 / -3
Query: 242 KTHFEQLFKETGSFSKNF 295
K HF QLFKETGS++K+F
Sbjct: 660 KPHFAQLFKETGSYNKSF 607
Score = 28.1 bits (55), Expect(2) = 7e-028
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / +2
Query: 294 KFLEKLPVSLKSCSKW 247
K L LPVSL SC+KW
Sbjct: 608 KLLL*LPVSLNSCAKW 655
>gb|BU999728.1|BU999728 HI15I03r HI Hordeum vulgare subsp. vulgare cDNA clone HI15I03
5-PRIME, mRNA sequence
Length = 543
Score = 123 bits (264), Expect(2) = 1e-045
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 116 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 295
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 296 EGVPYCKPHFAQLFKETGSYNKSF 367
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +2
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 86 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 265
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 266 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 358
Score = 88.6 bits (187), Expect(2) = 4e-028
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 366 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 187
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 186 VLVHTLHFCCVPL 148
Score = 80.3 bits (169), Expect(2) = 1e-045
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKS 454
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKS
Sbjct: 413 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKS 541
Score = 56.5 bits (117), Expect(2) = 4e-028
Identities = 28/44 (63%), Positives = 29/44 (65%)
Frame = -1 / -1
Query: 456 QLLW*DSPSRVNFSSGYTVFWQAAHLS*VPENADDSLLGALVSS 325
Q LW*D S V FS GY V Q AHLS VPEN +LLG LVSS
Sbjct: 543 QDLW*DFSSTVTFSRGYAVLPQVAHLSCVPENMPAALLGDLVSS 412
>gb|AV913180.1|AV913180 AV913180 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21c22 5', mRNA sequence
Length = 637
Score = 121 bits (259), Expect(2) = 9e-045
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +2 / +2
Query: 347 KLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLY 526
K+SSAF+GT++KC C KTVYP+E++T+ YHKSCFKC HGGC ++ S+Y A G L+
Sbjct: 188 KVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLF 367
Query: 527 CKIHFAQLFMEKGSYSHM 580
CK H QL EKG++S +
Sbjct: 368 CKHHHTQLIKEKGNFSQL 421
Score = 79.4 bits (167), Expect(2) = 9e-045
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +2 / +2
Query: 167 CFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLFKETGSFSKNF 295
CF+C HCKG L + +Y+S +GVLYC+ HF+QLFK TGS K+F
Sbjct: 2 CFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 130
>gb|BJ460376.1|BJ460376 BJ460376 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40j17 3', mRNA sequence
Length = 592
Score = 168 bits (362), Expect(2) = 2e-044
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / -1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 499 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 320
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 319 ALEGILYCKHHFSQLFKEKGSYNHLIK 239
Score = 116 bits (247), Expect(2) = 2e-026
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / +3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 243 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 422
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 423 VLPQVAHLSCVPENMPAALLGDLVSS 500
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / -1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 463 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 284
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 283 SQLFKEKGSYN 251
Score = 30.9 bits (61), Expect(2) = 2e-044
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2 / -1
Query: 251 FEQLFKETGSFSKNF 295
F QLFKETGS++K+F
Sbjct: 589 FAQLFKETGSYNKSF 545
Score = 23.1 bits (44), Expect(2) = 2e-026
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / +3
Query: 294 KFLEKLPVSLKSCSK 250
K L LPVSL SC+K
Sbjct: 546 KLLL*LPVSLNSCAK 590
>gb|BU977218.1|BU977218 HA11A17r HA Hordeum vulgare subsp. vulgare cDNA clone HA11A17
5-PRIME, mRNA sequence
Length = 558
Score = 123 bits (264), Expect(2) = 2e-041
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +1
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 157 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 336
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 337 EGVPYCKPHFAQLFKETGSYNKSF 408
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +1
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 127 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 306
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 307 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 399
Score = 88.6 bits (187), Expect(2) = 5e-025
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 407 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 228
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 227 VLVHTLHFCCVPL 189
Score = 65.7 bits (137), Expect(2) = 2e-041
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTL 430
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+
Sbjct: 454 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTV 558
Score = 46.0 bits (94), Expect(2) = 5e-025
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 426 VNFSSGYTVFWQAAHLS*VPENADDSLLGALVSS 325
V FS GY V Q AHLS VPEN +LLG LVSS
Sbjct: 554 VTFSRGYAVLPQVAHLSCVPENMPAALLGDLVSS 453
>gb|CA028260.1|CA028260 HZ61H10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61H10
5-PRIME, mRNA sequence
Length = 556
Score = 123 bits (264), Expect(2) = 2e-041
Identities = 46/84 (54%), Positives = 58/84 (69%)
Frame = +2 / +2
Query: 44 RQAGVGTMSSFTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSM 223
R+ + F+GTQ KC C KTV+ +D L+ DG +H+ CFKC HCK LS SYSS
Sbjct: 155 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 334
Query: 224 DGVLYCKTHFEQLFKETGSFSKNF 295
+GV YCK HF QLFKETGS++K+F
Sbjct: 335 EGVPYCKPHFAQLFKETGSYNKSF 406
Score = 111 bits (237), Expect = 6e-024
Identities = 42/91 (46%), Positives = 60/91 (65%)
Frame = +2 / +2
Query: 302 GGKSSDKGELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGC 481
GG++ + + ++ FSGTQ KC C KTVYP+++L+ +G +H++CFKC H
Sbjct: 125 GGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKS 304
Query: 482 ILTTSSYAALNGVLYCKIHFAQLFMEKGSYS 574
L+ SSY++ GV YCK HFAQLF E GSY+
Sbjct: 305 TLSFSSYSSFEGVPYCKPHFAQLFKETGSYN 397
Score = 88.6 bits (187), Expect(2) = 5e-025
Identities = 41/73 (56%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 294 KFLEKLPVSLKSCSKWVLQYSTPSMEE*LHIERIPLQWLHLKHVLW*VTPSAVRRSMKWT 115
K L LPVSL SC+KW LQ TPS EE*L ER+ LQW HLK W PS SM T
Sbjct: 405 KLLL*LPVSLNSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*T 226
Query: 114 VLSHSAHLSCVPV 76
VL H+ H CVP+
Sbjct: 225 VLVHTLHFCCVPL 187
Score = 65.7 bits (137), Expect(2) = 2e-041
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTL 430
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+
Sbjct: 452 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTV 556
Score = 46.0 bits (94), Expect(2) = 5e-025
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / -2
Query: 426 VNFSSGYTVFWQAAHLS*VPENADDSLLGALVSS 325
V FS GY V Q AHLS VPEN +LLG LVSS
Sbjct: 552 VTFSRGYAVLPQVAHLSCVPENMPAALLGDLVSS 451
>gb|BM817001.1|BM817001 HC05E10_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC05E10_T3.ab1 similar to (AF116851) LIM domain protein
PLIM-2 [Nicotiana tabacum], mRNA sequence
Length = 839
Score = 168 bits (362), Expect = 4e-041
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +2
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 2 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 181
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 182 ALEGILYCKHHFSQLFKEKGSYNHLIK 262
Score = 114 bits (244), Expect = 7e-025
Identities = 55/86 (63%), Positives = 58/86 (67%)
Frame = -1 / -3
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* + R QPP EHLKQ LW*D S V FS GY
Sbjct: 258 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LDGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 79
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 78 VLPQVAHLSCVPENMPAALLGDLVSS 1
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +2
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 38 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 217
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 218 SQLFKEKGSYN 250
>gb|BJ452829.1|BJ452829 BJ452829 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40j17 5', mRNA sequence
Length = 596
Score = 168 bits (362), Expect = 4e-041
Identities = 63/87 (72%), Positives = 75/87 (86%)
Frame = +2 / +1
Query: 326 ELTRAPSKLSSAFSGTQDKCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYA 505
ELTR+PSK + FSGTQDKCA C KT YPLEK+T+E +SYHKSCFKCSHGGC L+ S+YA
Sbjct: 91 ELTRSPSKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYA 270
Query: 506 ALNGVLYCKIHFAQLFMEKGSYSHMMK 586
AL G+LYCK HF+QLF EKGSY+H++K
Sbjct: 271 ALEGILYCKHHFSQLFKEKGSYNHLIK 351
Score = 116 bits (247), Expect = 3e-025
Identities = 56/86 (65%), Positives = 58/86 (67%)
Frame = -1 / -1
Query: 582 IMWL*LPFSMNSCAKWILQYRTPLSAA*EEVVRMQPPCEHLKQLLW*DSPSRVNFSSGYT 403
I WL*LPFS+ SC KW LQ R P AA* E R QPP EHLKQ LW*D S V FS GY
Sbjct: 347 IRWL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW*DFSSTVTFSRGYA 168
Query: 402 VFWQAAHLS*VPENADDSLLGALVSS 325
V Q AHLS VPEN +LLG LVSS
Sbjct: 167 VLPQVAHLSCVPENMPAALLGDLVSS 90
Score = 105 bits (225), Expect = 3e-022
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +2 / +1
Query: 74 FTGTQDKCAECDKTVHFIDLLTADGVTYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHF 253
F+GTQDKCA C KT + ++ +T + +YHK+CFKCSH LS +Y++++G+LYCK HF
Sbjct: 127 FSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHF 306
Query: 254 EQLFKETGSFS 286
QLFKE GS++
Sbjct: 307 SQLFKEKGSYN 339
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 424,603,077
Number of Sequences: 312970
Number of extensions: 6283671
Number of successful extensions: 52809
Number of sequences better than 1.0e-020: 104
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11704839442
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)