TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748394.2.2
(3527 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF261107.1|AF261107 Hordeum vulgare sucrose-phosphate sy... 372 e-164
gb|CA012753.1|CA012753 HT06F12r HT Hordeum vulgare subsp. v... 303 e-115
gb|BQ468536.1|BQ468536 HM01I14T HM Hordeum vulgare subsp. v... 410 e-113
gb|BU994139.1|BU994139 HM05O02r HM Hordeum vulgare subsp. v... 359 6e-098
gb|BJ463533.1|BJ463533 BJ463533 K. Sato unpublished cDNA li... 319 3e-095
gb|CA007166.1|CA007166 HU06P22r HU Hordeum vulgare subsp. v... 209 2e-091
gb|CA008120.1|CA008120 HU09P10r HU Hordeum vulgare subsp. v... 328 1e-088
gb|CV057680.1|CV057680 BNEL2E7 Barley EST endosperm library... 211 2e-084
gb|CA018261.1|CA018261 HV08B18r HV Hordeum vulgare subsp. v... 184 4e-084
gb|BG369152.1|BG369152 HVSMEi0022M21f Hordeum vulgare 20 DA... 248 6e-084
gb|BU998148.1|BU998148 HI10C07r HI Hordeum vulgare subsp. v... 311 1e-083
gb|AV836706.1|AV836706 AV836706 K. Sato unpublished cDNA li... 291 2e-077
gb|BM442430.2|BM442430 EBan01_SQ003_C15_R anther, yellow st... 284 2e-075
gb|CK123660.1|CK123660 BES1824105a02 BES1824 Hordeum vulgar... 262 1e-068
gb|CA018281.1|CA018281 HV08C15r HV Hordeum vulgare subsp. v... 135 6e-064
gb|CB880803.1|CB880803 HM07O02w HM Hordeum vulgare subsp. v... 242 9e-063
gb|BF628946.2|BF628946 HVSMEb0009E18f Hordeum vulgare seedl... 140 1e-056
gb|BG309288.2|BG309288 HVSMEc0007B10f Hordeum vulgare seedl... 199 6e-050
gb|BF619008.2|BF619008 HVSMEc0008G05f Hordeum vulgare seedl... 178 5e-049
gb|BU985379.1|BU985379 HF06P13r HF Hordeum vulgare subsp. v... 190 3e-047
gb|CA026869.1|CA026869 HZ57D09r HZ Hordeum vulgare subsp. v... 149 1e-043
gb|BG366918.2|BG366918 HVSMEi0008P16f Hordeum vulgare 20 DA... 178 2e-043
gb|BU975604.1|BU975604 HB31K24r BC Hordeum vulgare subsp. v... 118 3e-038
gb|BQ471768.1|BQ471768 HV03G17r HV Hordeum vulgare subsp. v... 140 2e-037
gb|CA003686.1|CA003686 HS15E01r HS Hordeum vulgare subsp. v... 138 4e-034
gb|CD662445.1|CD662445 UCRHV18_01cb12_b1 Drought-stressed D... 115 1e-032
gb|BM442070.2|BM442070 EBan01_SQ002_B15_R anther, yellow st... 94 7e-032
gb|BQ661019.1|BQ661019 HM01I14w HM Hordeum vulgare subsp. v... 133 4e-030
gb|BQ472479.1|BQ472479 HB09H08T BC Hordeum vulgare subsp. v... 104 9e-030
gb|BQ471087.1|BQ471087 HX04O21r HX Hordeum vulgare subsp. v... 92 1e-029
gb|BE437516.1|BE437516 SFR004.E11F990621 ITEC SFR Barley Le... 105 2e-029
gb|BU989121.1|BU989121 HF19N21r HF Hordeum vulgare subsp. v... 79 3e-029
gb|CA012374.1|CA012374 HT05E02r HT Hordeum vulgare subsp. v... 99 9e-028
gb|BU985680.1|BU985680 HF08E20r HF Hordeum vulgare subsp. v... 111 6e-027
gb|BJ454449.1|BJ454449 BJ454449 K. Sato unpublished cDNA li... 122 1e-026
gb|AV833883.1|AV833883 AV833883 K. Sato unpublished cDNA li... 74 1e-024
gb|BG416908.2|BG416908 HVSMEk0015C11f Hordeum vulgare testa... 115 1e-024
gb|BQ767300.1|BQ767300 EBro08_SQ008_C18_R root, 3 week, dro... 115 1e-024
gb|BJ466481.1|BJ466481 BJ466481 K. Sato unpublished cDNA li... 115 2e-024
gb|BU984860.1|BU984860 HF05E11r HF Hordeum vulgare subsp. v... 115 2e-024
gb|CA022248.1|CA022248 HZ42J07r HZ Hordeum vulgare subsp. v... 115 2e-024
gb|CA015292.1|CA015292 HT13N20r HT Hordeum vulgare subsp. v... 114 3e-024
gb|BU968420.1|BU968420 HB07H08r BC Hordeum vulgare subsp. v... 64 5e-024
emb|X65871.1|HVSSYNMR H.vulgare mRNA for sucrose synthase 74 9e-024
gb|AV917170.1|AV917170 AV917170 K. Sato unpublished cDNA li... 111 3e-023
gb|AV914348.1|AV914348 AV914348 K. Sato unpublished cDNA li... 109 1e-022
gb|AV931912.1|AV931912 AV931912 K. Sato unpublished cDNA li... 109 1e-022
emb|AJ238715.1|HVU238715 Hordeum vulgare partial complement... 68 3e-022
gb|CA011510.1|CA011510 HT05E02u HT Hordeum vulgare subsp. v... 104 3e-021
gb|BM442254.2|BM442254 EBan01_SQ002_K17_R anther, yellow st... 103 8e-021
>gb|AF261107.1|AF261107 Hordeum vulgare sucrose-phosphate synthase mRNA, partial cds
Length = 2085
Score = 372 bits (806), Expect(4) = e-164
Identities = 145/213 (68%), Positives = 177/213 (83%)
Frame = +1 / +1
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
PPIW+++MRF TNP KPMILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I
Sbjct: 265 PPIWSQIMRFFTNPRKPMILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAI 444
Query: 1708 DDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALVEP 1887
M +ASVLT+VL LID+YDLYG VA+PKHH ++VP+IYRLA + KG F+N A E
Sbjct: 445 SKMHNTSASVLTSVLTLIDEYDLYGQVAYPKHHKHSEVPDIYRLATRTKGAFVNVAYFEQ 624
Query: 1888 FGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKLVADKNLWQE 2067
FG+TLIEAA +GLP++ATKNG PV+I LNNGLLVDPHDQNAIADAL KL+++K LW
Sbjct: 625 FGVTLIEAAMNGLPVIATKNGAPVEIHQVLNNGLLVDPHDQNAIADALYKLLSEKQLWSR 804
Query: 2068 CRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNP 2166
CR NGL+NIH +SWPEHC+ +L+R+ +R+P
Sbjct: 805 CRENGLKNIHQFSWPEHCKNHLSRILTLGMRSP 903
Score = 186 bits (401), Expect(4) = 2e-064
Identities = 93/159 (58%), Positives = 107/159 (67%)
Frame = -1 / -2
Query: 2003 CGSTSSPLFNAFVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*IS 1824
CGST PL + +STG PF VA G P AASI+V PN S A L K P +L A+R*+S
Sbjct: 740 CGSTRRPLLST*WISTGAPFFVAITGKPFIAASIKVTPNCSK*ATLTKAPLVLVAKR*MS 561
Query: 1823 GTSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHS 1644
GTS L*CLG AT PY+SY SIS T V+T AL + ++S LP+I VRFASSLSGRHS
Sbjct: 560 GTSECL*CLGYAT*PYKSYSSISVSTDVKTDALVLCIFEIASRLPIISVRFASSLSGRHS 381
Query: 1643 PNALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
PNA T VV+FF G G ARIIG G V+ RI QIGG
Sbjct: 380 PNAFTSVVIFFSGYGRATARIIGFRGFVKKRII*DQIGG 264
Score = 124 bits (265), Expect(4) = e-164
Identities = 47/68 (69%), Positives = 60/68 (88%)
Frame = +1 / +1
Query: 1246 EELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPP 1425
EEL+LDASE+VI STRQEI+EQW LYDGF+V L + LRAR +RG +C+GRYMPRMV+IPP
Sbjct: 7 EELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKRGANCYGRYMPRMVIIPP 186
Query: 1426 GMDFSNVV 1449
G++F ++V
Sbjct: 187 GVEFGHIV 210
Score = 118 bits (253), Expect(2) = 4e-036
Identities = 58/200 (29%), Positives = 115/200 (57%)
Frame = -3 / -1
Query: 2133 EVSAAVLRP*VEVDVAQPVSPAFLPQVLVCHKLQQCISDGVLVVWVNEQSVV*CICNVDR 1954
+V A+ RP V++ + A P++L+ K QCI +G+L++W++++++V + + +R
Sbjct: 870 QVILAMFRPGKLVNIF*SIFSAS*PKLLLGKKFIQCICNGILIMWIDKETIVEHLMDFNR 691
Query: 1953 TTILGSDYRESVCRSLDQGETKRLNESRVDEDALHFGREAIDLRDVSLIVMLRERHASVQ 1774
++I S+ R+++ L QG K S VD+ L +++R+ ++VML H ++Q
Sbjct: 690 SSIFCSNNRQTIHSGLYQGNAKLFEISHVDKSPLSSCG*TVNVRNFRVLVMLGVCHLTIQ 511
Query: 1773 IILVNQLQNCGEDTGIASRHVVDVISVTHDQSKVCKFPEWTTLSKRFDEGSDVLLRVWS* 1594
IILV ++ +D H+ + ++VTH ++ + P+W T +K + +L R+W+
Sbjct: 510 IILVY*CKH*CQDRRTRVVHL*NSLTVTHY*CEIRELPQWATFTKCLYKRCYILFRIWTG 331
Query: 1593 *RQDHRLVRVGQEPHHFGPN 1534
Q+HRL R+ +E H+ P+
Sbjct: 330 NSQNHRLPRICKEAHYLRPD 271
Score = 109 bits (232), Expect(4) = e-164
Identities = 42/103 (40%), Positives = 66/103 (64%)
Frame = +1 / +1
Query: 2860 QDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQ 3039
+D S+ +C+AF + +P + + C+ +Y ++TRL V P+ ASRSQ
Sbjct: 1354 EDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQ 1533
Query: 3040 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
A+RYL VRWG+ + N+ +I GE GD+D EE+L GLH+T+I++G
Sbjct: 1534 AIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKG 1662
Score = 75.3 bits (158), Expect(4) = 2e-064
Identities = 34/50 (68%), Positives = 37/50 (74%)
Frame = -1 / -2
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVIT 1275
GGI TI G+*RP QL PRL A S +S+TS PSY HCSSISCLVL IT
Sbjct: 185 GGIITIRGI*RP*QLAPRLTLARSFLASMTSKPSYKFHCSSISCLVLAIT 36
Score = 55.1 bits (114), Expect(2) = 4e-036
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = -3 / -1
Query: 1446 NIAEIHSRRNHHHPRHVTTMAANPAPRPCPQHFLKLDIKSIVQSPLLINLLPCARDYKL* 1267
++ + ++RRN++H RH+T +A + C + K D+K+I+Q PLL LLP +
Sbjct: 207 DMTKFNTRRNYNHTRHITPIAVSATFDSCSKLPCKYDLKTIIQVPLLFYLLPSTSNNNFR 28
Query: 1266 RIQGQLL 1246
IQ Q L
Sbjct: 27 SIQRQFL 7
Score = 50.1 bits (103), Expect(4) = e-164
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1 / +1
Query: 2581 ISGFTLSTAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKL 2745
++GF LST++ +SE LL + FDA IC SGS +YYP + + K+
Sbjct: 1054 LTGFVLSTSLTISEICSLLVSVGMHPAGFDAFICNSGSSIYYPSYSGNTPSNSKV 1218
Score = 31.3 bits (62), Expect(4) = 2e-064
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -1 / -2
Query: 3086 MFPTDTPQRTERYLSACDLDASRGTT*SLVEFLQYMMWQ 2970
+F PQRT +YL A + DA G T SLV Y Q
Sbjct: 1580 IFGNSIPQRTNKYLIA*ERDA*IGVTDSLVALWLYSALQ 1464
Score = 27.6 bits (54), Expect(4) = 2e-064
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -1 / -2
Query: 2693 LPLPQMRASKSVAGILPSCRSWSVSDNGMAVDSVNP 2586
LPL QM+ASK + S +SD VDS P
Sbjct: 1166 LPLLQMKASKPAGCMPTDTSSEHISDIVSEVDSTKP 1059
>gb|CA012753.1|CA012753 HT06F12r HT Hordeum vulgare subsp. vulgare cDNA clone HT06F12
5-PRIME, mRNA sequence
Length = 700
Score = 303 bits (657), Expect(2) = e-115
Identities = 123/156 (78%), Positives = 140/156 (89%)
Frame = +1 / +1
Query: 862 NDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNG 1041
N G+ MGES GAYIVRIP GPR+KY+ KE LWP++QEFVDGAL HI+ MSK LGEQVGNG
Sbjct: 205 NLGDDMGESSGAYIVRIPFGPREKYIPKEQLWPHIQEFVDGALVHIMQMSKVLGEQVGNG 384
Query: 1042 RPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTY 1221
+PV P VIHGHYADAGD AALLSGALNVPMV TGHSLGR+KLEQLLKQGR +++E+++TY
Sbjct: 385 QPVWPVVIHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRQTRDEVNATY 564
Query: 1222 KIMRRIEGEELALDASELVITSTRQEIDEQWGLYDG 1329
KIMRRIE EEL LDASE+VITSTRQEID+QWGLY+G
Sbjct: 565 KIMRRIEAEELCLDASEIVITSTRQEIDKQWGLYNG 672
Score = 133 bits (284), Expect(2) = e-115
Identities = 54/71 (76%), Positives = 61/71 (85%)
Frame = +1 / +1
Query: 664 GLVRGENMELGRDSDTGGQVKYVVELARAMSMMPGVYRVDLFTRQVSSLDVDWSYGEPTE 843
GL+RGENMELGRDSDTGGQVKYVVELARA+ PGVYRVDL TRQ+S+ DVDWSYGEPTE
Sbjct: 1 GLIRGENMELGRDSDTGGQVKYVVELARALGETPGVYRVDLLTRQISAPDVDWSYGEPTE 180
Query: 844 MLCAGSNDGEG 876
ML +++ G
Sbjct: 181 MLSPRNSENLG 213
Score = 123 bits (263), Expect(2) = 6e-034
Identities = 59/154 (38%), Positives = 77/154 (50%)
Frame = +3 / +3
Query: 867 WRGDG*EWRSLHCAHTVWAAG*IPQEGSVVALPPRVCRWSPCAYPEHVQGSGRAGWKWEA 1046
W G*+ L+C TVW + + +A P +C C+Y VQGS R W+W
Sbjct: 210 WG*HG*KQWCLYCQDTVWPKRKVYP*RTTLAPHPGIC*RRTCSYHADVQGSRRTSWQWPT 389
Query: 1047 STALRDTWALCRCWRCCCSPFWCAECANGAHWPLTWEEQAGTTAEARAHVQGGDRFDIQD 1226
S A W LC C R CC W +CANG H + + Q T EAR QG + +IQD
Sbjct: 390 SMACCYPWTLC*CRRFCCFIIWGTQCANGFHRSFSGQRQIRATFEARTSNQG*SKCNIQD 569
Query: 1227 HEAYRG*GAGPGCVRACNHEHKAGD**AVGIVRW 1328
+ G*G C+ CNH+H A D * +GI+ W
Sbjct: 570 NAPD*G*GTLS*CI*NCNHKH*ARDR*TMGII*W 671
Score = 96.4 bits (204), Expect(3) = 6e-051
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = -1 / -3
Query: 848 NISVGSP*LQSTSRDDT*RVKRSTLYTPGIIDIALASSTTYFTWPPVSESRPSSMFSPRT 669
+ISVGSP*LQSTS + V RSTLYTPG+ ALASSTTY T PPVSESRPSS+FSPR
Sbjct: 185 SISVGSP*LQSTSGAEICLVSRSTLYTPGVSPNALASSTTYLT*PPVSESRPSSIFSPRI 6
Query: 668 R 666
R
Sbjct: 5 R 3
Score = 89.0 bits (188), Expect(3) = 6e-051
Identities = 36/87 (41%), Positives = 53/87 (60%)
Frame = -3 / -2
Query: 1137 EHHWHIQRTRKESSNISSIGIVPMYHVRQYWPPISNLLSQSLGHVQDMRKGSIDKLLEVR 958
E+HWHI+ R SS I+ I IV M + R YW I+NL S++LGH+ DM K +++K L+V
Sbjct: 480 ENHWHIECPR**SSRIACISIVSMDNNRPYWLAIANLFSENLGHLHDMNKCAVNKFLDVG 301
Query: 957 PQRFLLEVFIPRPTRYAHNVGSATLTH 877
P+ F ++ RY N+ + TH
Sbjct: 300 PELFFRDILFSWAKRYPDNISTTAFTH 220
Score = 56.5 bits (117), Expect(3) = 6e-051
Identities = 26/44 (59%), Positives = 27/44 (61%)
Frame = -1 / -3
Query: 1328 PSYNPHCSSISCLVLVITXXXXXXXXXXXSIRLMILYVESISSL 1197
P YNPHC SISCLVLVIT SIR +ILYV SSL
Sbjct: 671 PLYNPHCLSISCLVLVITISDASRQSSSASIRRIILYVAFTSSL 540
Score = 43.2 bits (88), Expect(2) = 6e-034
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3 / +3
Query: 666 SCSWRKHGTRS*F*YRWPGEICGRTCKSDVNDAWSVQGGPLHSSSVIS*RGLEL 827
S +WR++G +*F YR G+IC R C + WS+ GP + +* LEL
Sbjct: 3 SYTWREYGAWA*FRYRRSGQICCRAC*GVR*NTWSI*SGPADKADFCT*C*LEL 164
>gb|BQ468536.1|BQ468536 HM01I14T HM Hordeum vulgare subsp. vulgare cDNA clone HM01I14
5-PRIME, mRNA sequence
Length = 575
Score = 410 bits (889), Expect = e-113
Identities = 170/182 (93%), Positives = 177/182 (97%)
Frame = +1 / +3
Query: 1501 LEGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLT 1680
L+GASP+S+PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANL
Sbjct: 30 LDGASPRSLPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLV 209
Query: 1681 LIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGV 1860
LIMGNRDDID+M GNA+VLTTVLKL+DKYDLYGSVAFPKHHNQADVPEIYRL AK KGV
Sbjct: 210 LIMGNRDDIDEMPPGNANVLTTVLKLVDKYDLYGSVAFPKHHNQADVPEIYRLTAKTKGV 389
Query: 1861 FINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKL 2040
FINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALN+GLLVDPHDQNAIADALLKL
Sbjct: 390 FINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNSGLLVDPHDQNAIADALLKL 569
Query: 2041 VA 2046
VA
Sbjct: 570 VA 575
Score = 332 bits (719), Expect = 8e-090
Identities = 147/165 (89%), Positives = 152/165 (92%)
Frame = -1 / -2
Query: 2003 CGSTSSPLFNAFVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*IS 1824
CGSTSSPLF+AFVMSTGPPFLVATIGSPCAAASI VRP GSTRAGLMKTP +LA RR*IS
Sbjct: 532 CGSTSSPLFSAFVMSTGPPFLVATIGSPCAAASISVRPKGSTRAGLMKTPLVLAVRR*IS 353
Query: 1823 GTSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHS 1644
GTSA L*CLG ATLPYRSYLS SFRTVVRT ALP +SSMSSL PMIR +FASSLSGRHS
Sbjct: 352 GTSAWL*CLGKATLPYRSYLSTSFRTVVRTFALPGGISSMSSLFPMIRTKFASSLSGRHS 173
Query: 1643 PNALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGGIDLGEA 1509
PNALTRVVMFFFGSGLD+ARIIGL*GLVRNRITSAQIGG DLGEA
Sbjct: 172 PNALTRVVMFFFGSGLDSARIIGL*GLVRNRITSAQIGGSDLGEA 38
Score = 263 bits (569), Expect = 4e-069
Identities = 116/181 (64%), Positives = 138/181 (76%)
Frame = -3 / -1
Query: 2043 HKLQQCISDGVLVVWVNEQSVV*CICNVDRTTILGSDYRESVCRSLDQGETKRLNESRVD 1864
H+LQQ + DGVLVV V+ Q V CICNVDRT +LG D RE V RSLDQ + +RL++SR+D
Sbjct: 572 HQLQQRVGDGVLVVRVH*QPTVQCICNVDRTAVLGGDNREPVRRSLDQCKAERLHKSRID 393
Query: 1863 EDALHFGREAIDLRDVSLIVMLRERHASVQIILVNQLQNCGEDTGIASRHVVDVISVTHD 1684
ED L GREAI+LRDV L+VML E HAS+QIILV+QLQ+ GED +A RH+VDVISV HD
Sbjct: 392 EDTLGLGREAINLRDVGLVVMLGEGHASIQIILVDQLQDSGEDVCVAGRHLVDVISVPHD 213
Query: 1683 QSKVCKFPEWTTLSKRFDEGSDVLLRVWS**RQDHRLVRVGQEPHHFGPNWGH*LG*GTL 1504
Q+ VCKFP W SK FD+ SDVL R+ * RQDH LVRVG+EPHH P+WG * * T+
Sbjct: 212 QN*VCKFP*WAAFSKCFDKSSDVLFRIRP*QRQDHWLVRVGEEPHHLSPDWG**PR*STI 33
Query: 1503 Q 1501
Q
Sbjct: 32 Q 30
Score = 252 bits (544), Expect = 1e-065
Identities = 110/182 (60%), Positives = 124/182 (68%)
Frame = -2 / -3
Query: 2044 PQASAVHQRWRSGRVGQRAVRCLMHL*CRPDHHSW*RLSGVRVPQPRSG*DQTAQREQG* 1865
P ASA +RWRSGR G A C +HL*CRPD SW R SG R PQPRS * + A +EQ *
Sbjct: 573 PPASAARRRWRSGRAGPLAAHCSVHL*CRPDRRSWWRQSGARAPQPRSV*GRKAPQEQD* 394
Query: 1864 *RRPSFWPRGDRSPGRQPDCDA*GTPRFRTDHTCQSASELW*GHWHCQQTCRRCHLCYP* 1685
*R P WP GD+S GR+P CDA G PRF TDHTC+ AS W*G C++ RRCHLC P*
Sbjct: 393 *RHPWSWP*GDKSQGRRPGCDAWGRPRFHTDHTCRPASGQW*GRLRCREASRRCHLCSP* 214
Query: 1684 SE*GLQVP*VDDTLQTL*RG**CSSSGLVLITPGSSACEGWSGTASLRPKLGALTWVRHP 1505
SE LQVP V LQ L*+ **CS S L PGS ACEGW GTAS +P+LG +T V+H
Sbjct: 213 SELSLQVPLVGGILQML*QE**CSFSDQALTAPGSLACEGW*GTASPQPRLGVVTSVKHH 34
Query: 1504 PN 1499
PN
Sbjct: 33 PN 28
Score = 251 bits (542), Expect = 2e-065
Identities = 111/182 (60%), Positives = 125/182 (68%)
Frame = +3 / +2
Query: 1500 FGGCLTQVNAPNLGRSDAVPDQPSQADDPGVIKTRPEEEHHYPRQSVWRVSSTQGTCKPY 1679
FG C T+V PNLG DAVP QPSQA+DPG +K E+EHHY QS+WR+ T+GTCK
Sbjct: 29 FGWCFTEVTTPNLG*GDAVPHQPSQANDPGAVKA*SEKEHHYSCQSIWRMPPTKGTCKLS 208
Query: 1680 SDHG*QR*HRRHVCWQCQCPHHSSEAD*QV*SVRKRGVP*ASQSG*RPGDLSPRGQNEGR 1859
SDHG QR*HRR Q + PHH EA QV*SV KRG+P ASQ G RP DLSP GQ++G
Sbjct: 209 SDHGEQR*HRRDASRQRKRPHHCPEAGRQV*SVWKRGLPQASQPGRRP*DLSPHGQDQGC 388
Query: 1860 LHQPCSR*AVWSHPDRGCGTRTPDSRYQEWWSGRHYKCIKQRTAR*PTRPERHR*CTAEA 2039
LHQ CS A + DRGCG R PD R+QE SGRHYKC +Q A P RPERHR AEA
Sbjct: 389 LHQSCSCGAFRPYTDRGCGARAPDCRHQERRSGRHYKCTEQWAASGPARPERHRRRAAEA 568
Query: 2040 CG 2045
G
Sbjct: 569 GG 574
Score = 148 bits (318), Expect(2) = 2e-046
Identities = 73/117 (62%), Positives = 79/117 (67%)
Frame = +2 / +1
Query: 1499 VWRVPHPSQCPQFGPK*CGS*PTLTSR*SWRYQDQTRRRTSLPSSKRLESVVHSGNLQTL 1678
+W V H PQ G +*CGS PTLTS+*SWR Q R+RTSL SK LE+ H GNLQT
Sbjct: 28 IWMVLHRGHYPQSGLR*CGSSPTLTSQ*SWRCQGLIRKRTSLLLSKHLENAAH*GNLQT* 207
Query: 1679 L*SWVTEMTSTTCLLAMPVSSPQF*S*LTSMICTEAWRSLSITIRLTSRRSIASRPK 1849
*SW TEMTST CL A SSP *S TSMIC EAW S SIT R TS R IASRP+
Sbjct: 208 F*SWGTEMTSTRCLPATQTSSPLS*SWSTSMICMEAWPSPSITTRPTSLRFIASRPR 378
Score = 59.7 bits (124), Expect(2) = 2e-046
Identities = 28/42 (66%), Positives = 28/42 (66%)
Frame = +2 / +1
Query: 1919 TDSR*SLPRMVVRSTLQMH*TTDCSLTHTTRTPSLMHC*SLW 2044
T SR S PR VRSTLQMH*T C T TTRTPS C*S W
Sbjct: 448 TGSRLSPPRTAVRSTLQMH*TVGC*WTRTTRTPSPTRC*SWW 573
>gb|BU994139.1|BU994139 HM05O02r HM Hordeum vulgare subsp. vulgare cDNA clone HM05O02
5-PRIME, mRNA sequence
Length = 593
Score = 359 bits (778), Expect = 6e-098
Identities = 142/197 (72%), Positives = 167/197 (84%)
Frame = +1 / +2
Query: 2599 STAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKLRPDQDYLMHIS 2778
STA+ ETLQLLQ+GK+P TDFDALICGSGS+VYYPGTA C+DA+G+ DQDYL++I+
Sbjct: 2 STAIQFPETLQLLQMGKVPPTDFDALICGSGSDVYYPGTAQCLDAQGRFLFDQDYLLYIN 181
Query: 2779 HRWSHDGARQTIAKLMGAQDGSGDAVEQDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXX 2958
HRWS+DGARQTI KLM +QDGSG+ VE DV S NAHCV+F ++DP+KV+T+D
Sbjct: 182 HRWSYDGARQTIGKLMASQDGSGNVVEPDVESCNAHCVSFFVRDPKKVRTIDEMRERLRM 361
Query: 2959 XXXXCHIMYCRNSTRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLS 3138
CH+MYCRNSTR+QVVPL+ASRSQALRYL VRWG++VGNMYLI GEHGDTD EEMLS
Sbjct: 362 RGLRCHLMYCRNSTRMQVVPLMASRSQALRYLFVRWGLAVGNMYLIVGEHGDTDREEMLS 541
Query: 3139 GLHKTVIVRGVTEKGSE 3189
GLHKTVIV+GVTEKGSE
Sbjct: 542 GLHKTVIVKGVTEKGSE 592
Score = 246 bits (531), Expect = 7e-064
Identities = 113/196 (57%), Positives = 133/196 (67%)
Frame = -3 / -2
Query: 3186 RTLLGDATDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPECL*P*C*QRDNL 3007
R L DA DD LV* HLL IGVAM P DQ+HVPH APAH ++PECL*P*C +RDNL
Sbjct: 589 RAFLSDAFDDDRLV*S*KHLLAIGVAMLPNDQVHVPHGQAPAHKEVPECL*P*CHERDNL 410
Query: 3006 KPCRVPAVHDVAAETTHPQPLPHLIDRFHLLGVFDEERDTVCITGRHVLLDSVA*TVLSA 2827
P RVPAVH+VA E THPQPLPHLI+ HLL V D+E D V I G HV LD +A VL
Sbjct: 409 HPRRVPAVHEVAPEATHPQPLPHLINSSHLLRVSDKEGDAVRIAGLHVRLDDIAGAVL*G 230
Query: 2826 HELRYGLPRAVMGPAVADVHQIVLIWAQLSFSVHAVRRARIVHLAAAATDEGVEVGRWDL 2647
HEL Y L AV+ P V DV Q+VL+ + + A+RR +VH+AA DE VEVGR +L
Sbjct: 229 HELPYRLSGAVVRPPVVDVKQVVLVKKKPPLGIQALRRTGVVHIAATTADERVEVGRGNL 50
Query: 2646 AELQKLECLGQRHGSR 2599
LQ+LE LG+ + R
Sbjct: 49 PHLQELERLGKLYRRR 2
Score = 202 bits (436), Expect = 9e-051
Identities = 99/188 (52%), Positives = 108/188 (57%)
Frame = +2 / +3
Query: 2618 PRHSSFCSSARSQRPTSTPSSVXXXXRCTILARRTAWTLKESCAQIRTI*CTSATAGPMT 2797
PR SS C R RPTST SS CT RR+AW + +T TS T G T
Sbjct: 21 PRRSSSCRWGRFPRPTSTRSSAVVAAMCTTPVRRSAWMPRGGFFLTKTTCFTSTTGGLTT 200
Query: 2798 ARGRP*RSSWALRTVQATLSSRTWRPVMHTVXXXXXXXXXXXXXXMR*GSG*GCVVSAAT 2977
A R * SSW RT A SSRTW P M T MR G G*GCV S AT
Sbjct: 201 APDRR*GSSWPHRTAPAMSSSRTWSPAMRTASPSLSETRRR*ELLMRCGRG*GCVASGAT 380
Query: 2978 SCTAGTRQGFRLSLC*HQGHRHSGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP* 3157
SCTAGTR+G RLSL HQGH+HSG CAGA+ WGTC *S G+MATPI RRC+ YTR
Sbjct: 381 SCTAGTRRGCRLSLSWHQGHKHSGTSLCAGAWPWGTCT*SLGSMATPIARRCFQDYTRRS 560
Query: 3158 SSVASPRR 3181
SS AS R+
Sbjct: 561 SSKASLRK 584
Score = 147 bits (316), Expect(3) = 1e-053
Identities = 66/106 (62%), Positives = 71/106 (66%)
Frame = -1 / -3
Query: 3089 YMFPTDTPQRTERYLSACDLDASRGTT*SLVEFLQYMMWQXXXXXXXXXXXXSTVFTFWG 2910
YMFPT PQRT+RYLSACDLDA RGTT LVEF QYM W S V TF+G
Sbjct: 492 YMFPTAKPQRTKRYLSACDLDAMRGTTCILVEFRQYMRWHRRPRILSLSRISSIVLTFFG 313
Query: 2909 SLMRNATQCALLDATSCSTASPEPS*APMSFAMVCLAPSWDQRWLM 2772
SL + TQCAL D+TS ST PEPS MSF +VCLAPS D RWLM
Sbjct: 312 SLTKKETQCALQDSTSGSTTLPEPSCEAMSFPIVCLAPS*DHRWLM 175
Score = 134 bits (288), Expect(3) = 6e-039
Identities = 61/100 (61%), Positives = 66/100 (66%)
Frame = +3 / +1
Query: 2880 CTLCRVPHQRPPKGENGR*DEGAAEDAWSPLPHHVLQELDKASGCPSASIKVTGTQVSFR 3059
C L + QRP +GEN *D G AEDAW P+P HVL ELD+ +GCPS IKVT TQV
Sbjct: 283 CALRLLLCQRPEEGENY**DAGEAEDAWPPVPPHVLPELDEDAGCPSHGIKVTSTQVPLC 462
Query: 3060 ALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHRE 3179
ALG GEHV D G WRHRSRGDA R TQD R RH E
Sbjct: 463 ALGLGRGEHVPDRWGAWRHRSRGDAFRTTQDGHRQRRH*E 582
Score = 75.3 bits (158), Expect(3) = 1e-053
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = -1 / -3
Query: 2717 AVPG*YTSLPLPQMRASKSVAGILPSCRSWSVSDNGMAVD 2598
AVPG*YTSLPLPQM ASKSV G P CRSWSVS N +AVD
Sbjct: 120 AVPG*YTSLPLPQMSASKSVGGTFPICRSWSVSGNCIAVD 1
Score = 70.7 bits (148), Expect(2) = 2e-022
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = -2 / -1
Query: 3178 SR*RHGRSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT*VPVTLMLAEGQP 3008
S+*R R SCV ASP DRCRH P+ S TCSP+ PSA++ T*V VTLM EGQP
Sbjct: 581 SQ*RL*R*PSCVVLKASPRDRCRHAPQRSGTCSPRPSPSAQRGT*VLVTLMP*EGQP 411
Score = 57.0 bits (118), Expect(2) = 2e-022
Identities = 29/51 (56%), Positives = 33/51 (64%)
Frame = -2 / -1
Query: 2911 GL**GTRHSVHYWTPRPARQRRLNRPERP*ASLWSASRRHGTSGG*CASDS 2759
GL* R S H TPRPAR+ +RP RP*ASL S RR T+GG*C + S
Sbjct: 314 GL*QRRRRSAHCRTPRPARRHCRSRPVRP*ASLSSVWRRRKTTGG*CKAGS 162
Score = 37.3 bits (75), Expect(3) = 6e-039
Identities = 20/44 (45%), Positives = 24/44 (54%)
Frame = +3 / +1
Query: 2598 VDCHAVVRDTPASAARQDPSDRLRRPHLWQRQRGVLSWHGELHG 2729
VD + RD PA A + DRLRR HL QR VL +G + G
Sbjct: 1 VDGDTISRDAPAPADGEGSPDRLRRAHLR*WQRCVLPRYGAVLG 132
Score = 29.5 bits (58), Expect(3) = 6e-039
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 2772 HQPPLVP*RREADHSEAH 2825
HQPP+V RR+ D EAH
Sbjct: 175 HQPPVVLRRRQTDDREAH 228
Score = 28.1 bits (55), Expect(3) = 1e-053
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTP T+TVL
Sbjct: 588 EPFSVTPLTMTVL 550
>gb|BJ463533.1|BJ463533 BJ463533 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g04 5', mRNA sequence
Length = 705
Score = 319 bits (690), Expect(2) = 3e-095
Identities = 128/181 (70%), Positives = 153/181 (84%)
Frame = +1 / +1
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
PPIW+E+MRF TNP KP+ILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I
Sbjct: 163 PPIWSEIMRFFTNPRKPLILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAI 342
Query: 1708 DDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALVEP 1887
MS +A+VLT+VL LID+YDLYG VA+PKHH ++V +IYRLAA+ KG F+N A E
Sbjct: 343 SKMSNMSAAVLTSVLTLIDEYDLYGQVAYPKHHKHSEVLDIYRLAARTKGAFVNVAYFEQ 522
Query: 1888 FGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKLVADKNLWQE 2067
FG+TLIEAA HGLP++ATKNG PV+I L+NGLLVDPHDQ+AIADAL KL++DK LW
Sbjct: 523 FGVTLIEAAMHGLPVIATKNGAPVEIHQVLDNGLLVDPHDQHAIADALYKLLSDKQLWSR 702
Query: 2068 C 2070
C
Sbjct: 703 C 705
Score = 181 bits (390), Expect(2) = 7e-048
Identities = 90/158 (56%), Positives = 105/158 (66%)
Frame = -1 / -2
Query: 2000 GSTSSPLFNAFVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISG 1821
GST PL N + +STG PF VA G PC AASI+V PN S A K PF+LAA+R*IS
Sbjct: 635 GSTRRPLSNTW*ISTGAPFFVAITGKPCMAASIKVTPNCSK*ATFTKAPFVLAAKR*ISR 456
Query: 1820 TSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSP 1641
TS L*C G AT PY+SY SI+ T V+T AL + ++S LP+I VR ASSL+G HSP
Sbjct: 455 TSECL*CFGYAT*PYKSYSSINVSTDVKTAALILLILEIASRLPIISVRLASSLNGLHSP 276
Query: 1640 NALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
A T VV+FF G G ARI G G V+NRI S QIGG
Sbjct: 275 KAFTSVVIFFSGYGRATARIKGFLGFVKNRIISDQIGG 162
Score = 116 bits (249), Expect(2) = 2e-027
Identities = 57/176 (32%), Positives = 104/176 (59%)
Frame = -3 / -1
Query: 2061 PQVLVCHKLQQCISDGVLVVWVNEQSVV*CICNVDRTTILGSDYRESVCRSLDQGETKRL 1882
P++LV KL +CI + +L+V +N+++VV + N R++I +YR ++ SL QG+T+
Sbjct: 696 PELLVRKKLIECICNCMLIVGINKETVVQHLVNFYRSSIFCCNYR*TMHGSLYQGDTELF 517
Query: 1881 NESRVDEDALHFGREAIDLRDVSLIVMLRERHASVQIILVNQLQNCGEDTGIASRHVVDV 1702
S + + L I++++ + VML H ++QII +NQ + +++ H +
Sbjct: 516 KVSYIYKSTLCSRC*TINIKNF*VFVMLWVCHLTIQIIFINQCKY*CQNSCTHITHFGNS 337
Query: 1701 ISVTHDQSKVCKFPEWTTLSKRFDEGSDVLLRVWS**RQDHRLVRVGQEPHHFGPN 1534
++VTH+Q V K P+W+ +K F + ++L RVW+ Q+ R R+ +EPH+ PN
Sbjct: 336 LTVTHNQC*VSKLPQWSAFTKSFHKCCNILFRVWTSNSQNQRFPRICEEPHYLRPN 169
Score = 52.4 bits (108), Expect(2) = 3e-095
Identities = 16/28 (57%), Positives = 25/28 (89%)
Frame = +1 / +1
Query: 1366 ARRGVSCHGRYMPRMVVIPPGMDFSNVV 1449
+ RG +C+GRYMPRMV+IPPG++F +++
Sbjct: 25 SXRGANCYGRYMPRMVIIPPGVEFGHMI 108
Score = 31.8 bits (63), Expect(2) = 7e-048
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 1424 GGITTILGM*RPWQLTPR 1371
GGI TI GM*RP QL PR
Sbjct: 83 GGIITIRGM*RP*QLAPR 30
Score = 28.1 bits (55), Expect(2) = 2e-027
Identities = 9/34 (26%), Positives = 23/34 (67%)
Frame = -3 / -1
Query: 1479 VTIPINVFMNYNIAEIHSRRNHHHPRHVTTMAAN 1378
+ + I++ ++ + ++ RN++H RHVT++A +
Sbjct: 138 IFLTIHIKFMNHMTKFNTWRNYNHTRHVTSIAVS 37
>gb|CA007166.1|CA007166 HU06P22r HU Hordeum vulgare subsp. vulgare cDNA clone HU06P22
5-PRIME, mRNA sequence
Length = 660
Score = 209 bits (450), Expect(2) = 2e-091
Identities = 84/120 (70%), Positives = 104/120 (86%)
Frame = +1 / +3
Query: 1090 DVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRIEGEELALDAS 1269
D AAL+SGALNV MV TGH LG++KLE LLKQGR ++EEI+ TYKIMRRIE EEL+LDAS
Sbjct: 3 DEAALISGALNVHMVFTGHFLGKDKLEGLLKQGRQTREEINMTYKIMRRIEAEELSLDAS 182
Query: 1270 ELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPPGMDFSNVV 1449
E+VI STRQEI+EQW LYDGF+V L + LRAR +RG +C+GRYMPRMV+IPPG++F +++
Sbjct: 183 EIVIASTRQEIEEQWNLYDGFEVMLARKLRARVKRGANCYGRYMPRMVIIPPGVEFGHMI 362
Score = 149 bits (320), Expect(2) = 2e-091
Identities = 61/81 (75%), Positives = 72/81 (88%)
Frame = +1 / +3
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
PPIW+E+MRF TNP KP+ILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I
Sbjct: 417 PPIWSEIMRFFTNPRKPLILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAI 596
Query: 1708 DDMSAGNASVLTTVLKLIDKY 1770
MS +A+VLT+VL LID+Y
Sbjct: 597 SKMSNMSAAVLTSVLTLIDEY 659
Score = 92.3 bits (195), Expect(2) = 7e-038
Identities = 46/76 (60%), Positives = 49/76 (64%)
Frame = -1 / -3
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXX 1245
GGI TI GM*RP QL PRL A S +S+TS PSY HCSSISCLVL IT
Sbjct: 337 GGIITIRGM*RP*QLAPRLTLARSFLASITSKPSYKFHCSSISCLVLAITISDASRDNSS 158
Query: 1244 XSIRLMILYVESISSL 1197
SIR +ILYV ISSL
Sbjct: 157 ASIRRIILYVIFISSL 110
Score = 87.7 bits (185), Expect(2) = 7e-038
Identities = 44/81 (54%), Positives = 53/81 (65%)
Frame = -1 / -3
Query: 1769 YLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSPNALTRVVMFFFGSGLDN 1590
Y SI+ T V+T AL + ++S LP+I VR ASSL+G HSP A T VV+FF G G
Sbjct: 658 YSSINVSTDVKTAALILLILEIASRLPIISVRLASSLNGLHSPKAFTSVVIFFSGYGRAT 479
Query: 1589 ARIIGL*GLVRNRITSAQIGG 1527
ARI G G V+NRI S QIGG
Sbjct: 478 ARIKGFLGFVKNRIISDQIGG 416
>gb|CA008120.1|CA008120 HU09P10r HU Hordeum vulgare subsp. vulgare cDNA clone HU09P10
5-PRIME, mRNA sequence
Length = 594
Score = 328 bits (711), Expect = 1e-088
Identities = 131/190 (68%), Positives = 161/190 (84%)
Frame = +1 / +3
Query: 880 GESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNGRPVLPY 1059
GE+ GAYI RIP GP+DKYL KE LWPY+QEFVDGAL+HI++MSK +GE++G G P+ P
Sbjct: 9 GENCGAYITRIPFGPKDKYLAKEHLWPYVQEFVDGALSHIVHMSKIIGEEIGCGHPMWPA 188
Query: 1060 VIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRI 1239
VIHGHYA AG AAL+SGALNV MV TGH LG++KLE LLKQGR ++EEI+ TYKIMRRI
Sbjct: 189 VIHGHYASAGVAAALISGALNVHMVFTGHFLGKDKLEGLLKQGRQTREEINMTYKIMRRI 368
Query: 1240 EGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVI 1419
E EEL+LDASE+VI STRQEI+EQW LYDGF+V L + LRAR +R +C+GRYMPRMV+I
Sbjct: 369 EAEELSLDASEIVIASTRQEIEEQWNLYDGFEVMLARKLRARVKRXANCYGRYMPRMVII 548
Query: 1420 PPGMDFSNVV 1449
PPG++F +++
Sbjct: 549 PPGVEFGHMI 578
Score = 88.1 bits (186), Expect(2) = 2e-026
Identities = 45/76 (59%), Positives = 48/76 (63%)
Frame = -1 / -3
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXX 1245
GGI TI GM*RP QL RL A S +S+TS PSY HCSSISCLVL IT
Sbjct: 553 GGIITIRGM*RP*QLAXRLTLARSFLASITSKPSYKFHCSSISCLVLAITISDASRDNSS 374
Query: 1244 XSIRLMILYVESISSL 1197
SIR +ILYV ISSL
Sbjct: 373 ASIRRIILYVIFISSL 326
Score = 57.4 bits (119), Expect(2) = 2e-026
Identities = 28/55 (50%), Positives = 31/55 (56%)
Frame = -1 / -3
Query: 1064 IT*GSTGLPFPTCSPRALDMFRICARAPSTNSWR*GHNASFLRYLSRGPHGMRTM 900
IT G G P P SP DM I APSTNS *G S RYLS GP+G+R +
Sbjct: 193 ITAGHIGCPQPISSPMIFDMCTI*LSAPSTNSCT*GQRCSLARYLSFGPNGIRVI 29
>gb|CV057680.1|CV057680 BNEL2E7 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL2E7 5' similar to sucrose-phosphate
synthase, mRNA sequence
Length = 700
Score = 211 bits (455), Expect(2) = 2e-084
Identities = 85/123 (69%), Positives = 101/123 (82%)
Frame = +1 / +1
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
PPIW+++MRF TNP KPMILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I
Sbjct: 259 PPIWSQIMRFFTNPRKPMILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAI 438
Query: 1708 DDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALVEP 1887
M +ASVLT+VL LID+YDLYG VA+PKHH ++VP+IYRLA + KG F+N A E
Sbjct: 439 SKMHNTSASVLTSVLTLIDEYDLYGQVAYPKHHKHSEVPDIYRLATRTKGAFVNVAYFEQ 618
Query: 1888 FGL 1896
L
Sbjct: 619 XAL 627
Score = 140 bits (300), Expect(2) = 1e-048
Identities = 70/116 (60%), Positives = 81/116 (69%)
Frame = -1 / -3
Query: 1874 AGLMKTPFILAARR*ISGTSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSL 1695
A L K P +L A+R*+SGTS L*CLG AT PY+SY SIS T V+T AL + ++S
Sbjct: 605 ATLTKAPLVLVAKR*MSGTSECL*CLGYAT*PYKSYSSISVSTDVKTDALVLCIFEIASR 426
Query: 1694 LPMIRVRFASSLSGRHSPNALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
LP+I VRFASSLSGRHSPNA T VV+FF G G ARIIG G V+ RI QIGG
Sbjct: 425 LPIISVRFASSLSGRHSPNAFTSVVIFFSGYGRATARIIGFRGFVKKRII*DQIGG 258
Score = 124 bits (265), Expect(2) = 2e-084
Identities = 47/68 (69%), Positives = 60/68 (88%)
Frame = +1 / +1
Query: 1246 EELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPP 1425
EEL+LDASE+VI STRQEI+EQW LYDGF+V L + LRAR +RG +C+GRYMPRMV+IPP
Sbjct: 1 EELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKRGANCYGRYMPRMVIIPP 180
Query: 1426 GMDFSNVV 1449
G++F ++V
Sbjct: 181 GVEFGHIV 204
Score = 75.3 bits (158), Expect(2) = 1e-048
Identities = 34/50 (68%), Positives = 37/50 (74%)
Frame = -1 / -3
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVIT 1275
GGI TI G+*RP QL PRL A S +S+TS PSY HCSSISCLVL IT
Sbjct: 179 GGIITIRGI*RP*QLAPRLTLARSFLASMTSKPSYKFHCSSISCLVLAIT 30
Score = 69.3 bits (145), Expect(2) = 2e-021
Identities = 34/114 (29%), Positives = 64/114 (56%)
Frame = -3 / -2
Query: 1875 SRVDEDALHFGREAIDLRDVSLIVMLRERHASVQIILVNQLQNCGEDTGIASRHVVDVIS 1696
S VD+ L +++R+ ++VML H ++QIILV ++ +D H+ + ++
Sbjct: 606 SHVDKSPLSSCG*TVNVRNFRVLVMLGVCHLTIQIILVY*CKH*CQDRRTRVVHL*NSLT 427
Query: 1695 VTHDQSKVCKFPEWTTLSKRFDEGSDVLLRVWS**RQDHRLVRVGQEPHHFGPN 1534
VTH ++ + P+W T +K + +L R+W+ Q+HRL R+ +E H+ P+
Sbjct: 426 VTHY*CEIRELPQWATFTKCLYKRCYILFRIWTGNSQNHRLPRICKEAHYLRPD 265
Score = 55.1 bits (114), Expect(2) = 2e-021
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = -3 / -2
Query: 1446 NIAEIHSRRNHHHPRHVTTMAANPAPRPCPQHFLKLDIKSIVQSPLLINLLPCARDYKL* 1267
++ + ++RRN++H RH+T +A + C + K D+K+I+Q PLL LLP +
Sbjct: 201 DMTKFNTRRNYNHTRHITPIAVSATFDSCSKLPCKYDLKTIIQVPLLFYLLPSTSNNNFR 22
Query: 1266 RIQGQLL 1246
IQ Q L
Sbjct: 21 SIQRQFL 1
>gb|CA018261.1|CA018261 HV08B18r HV Hordeum vulgare subsp. vulgare cDNA clone HV08B18
5-PRIME, mRNA sequence
Length = 634
Score = 184 bits (397), Expect(2) = 4e-084
Identities = 72/104 (69%), Positives = 91/104 (87%)
Frame = +1 / +1
Query: 1138 TGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQWG 1317
TGH LG++KLE LLKQGR ++EEI+ TYKIMRRIE EEL+LDASE+VI STRQEI+EQW
Sbjct: 25 TGHFLGKDKLEGLLKQGRQTREEINMTYKIMRRIEAEELSLDASEIVIASTRQEIEEQWN 204
Query: 1318 LYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPPGMDFSNVV 1449
LYDGF+V L + LRAR +RG +C+GRYMPRMV+IPPG++F +++
Sbjct: 205 LYDGFEVMLARKLRARVKRGANCYGRYMPRMVIIPPGVEFGHMI 336
Score = 149 bits (320), Expect(2) = 4e-084
Identities = 61/81 (75%), Positives = 72/81 (88%)
Frame = +1 / +1
Query: 1528 PPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDI 1707
PPIW+E+MRF TNP KP+ILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I
Sbjct: 391 PPIWSEIMRFFTNPRKPLILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAI 570
Query: 1708 DDMSAGNASVLTTVLKLIDKY 1770
MS +A+VLT+VL LID+Y
Sbjct: 571 SKMSNMSAAVLTSVLTLIDEY 633
Score = 92.3 bits (195), Expect(2) = 7e-038
Identities = 46/76 (60%), Positives = 49/76 (64%)
Frame = -1 / -3
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXX 1245
GGI TI GM*RP QL PRL A S +S+TS PSY HCSSISCLVL IT
Sbjct: 311 GGIITIRGM*RP*QLAPRLTLARSFLASITSKPSYKFHCSSISCLVLAITISDASRDNSS 132
Query: 1244 XSIRLMILYVESISSL 1197
SIR +ILYV ISSL
Sbjct: 131 ASIRRIILYVIFISSL 84
Score = 87.7 bits (185), Expect(2) = 7e-038
Identities = 44/81 (54%), Positives = 53/81 (65%)
Frame = -1 / -3
Query: 1769 YLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSPNALTRVVMFFFGSGLDN 1590
Y SI+ T V+T AL + ++S LP+I VR ASSL+G HSP A T VV+FF G G
Sbjct: 632 YSSINVSTDVKTAALILLILEIASRLPIISVRLASSLNGLHSPKAFTSVVIFFSGYGRAT 453
Query: 1589 ARIIGL*GLVRNRITSAQIGG 1527
ARI G G V+NRI S QIGG
Sbjct: 452 ARIKGFLGFVKNRIISDQIGG 390
>gb|BG369152.1|BG369152 HVSMEi0022M21f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0022M21f, mRNA sequence
Length = 826
Score = 248 bits (537), Expect(2) = 6e-084
Identities = 100/130 (76%), Positives = 119/130 (91%)
Frame = +1 / +1
Query: 1069 GHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRIEGE 1248
GHYADAGD AALLSGALNVPMV TGHSLGR+KLEQLLKQGR +++E+++TYKIMRRIE E
Sbjct: 1 GHYADAGDSAALLSGALNVPMVFTGHSLGRDKLEQLLKQGRQTRDEVNATYKIMRRIEAE 180
Query: 1249 ELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVSCHGRYMPRMVVIPPG 1428
EL LDASE+VITSTRQEID+QWGLY+GFDV +E+ LRAR +RGVSC+GR MPRM+ IPPG
Sbjct: 181 ELCLDASEIVITSTRQEIDKQWGLYNGFDVIMERKLRARIKRGVSCYGREMPRMIPIPPG 360
Query: 1429 MDFSNVVVHE 1458
M+FS++V H+
Sbjct: 361 MEFSHIVPHD 390
Score = 92.3 bits (195), Expect(3) = 6e-032
Identities = 45/76 (59%), Positives = 48/76 (63%)
Frame = -1 / -3
Query: 1424 GGITTILGM*RPWQLTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXX 1245
GGI I G+ RP QLTPR ALS S +TSNP YNPHC SISCLVLVIT
Sbjct: 356 GGIGIIRGISRP*QLTPRFILALSFLSIITSNPLYNPHCLSISCLVLVITISDASRQSSS 177
Query: 1244 XSIRLMILYVESISSL 1197
SIR +ILYV SSL
Sbjct: 176 ASIRRIILYVAFTSSL 129
Score = 84.9 bits (179), Expect(2) = 6e-084
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +1 / +1
Query: 1504 EGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTL 1683
E +S PP+WA++MRF +PHKPMILA++ DPKKNIT A+GE R L A+L L
Sbjct: 418 EVSSDSPDPPVWADIMRFF*DPHKPMILAVAEADPKKNITDAGDAWGEHRELEN*ADLAL 597
Query: 1684 IMGN 1695
+MGN
Sbjct: 598 VMGN 609
Score = 57.0 bits (118), Expect(3) = 6e-032
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = -1 / -3
Query: 1694 LPMIRVRFASSLSGRHSPNALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
LPM R A S R SP+A VMFF GS ARI+GL*G + RI SAQ GG
Sbjct: 608 LPMTNARSA*FSSSRCSPHASPASVMFFLGSASATARIMGL*GSQKKRIISAQTGG 441
Score = 28.6 bits (56), Expect(3) = 6e-032
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 1137 EHHWHIQRTRKESSNISSIGIV 1072
E+HWHI+ R SS I+ I IV
Sbjct: 69 ENHWHIECPR**SSRIACISIV 4
>gb|BU998148.1|BU998148 HI10C07r HI Hordeum vulgare subsp. vulgare cDNA clone HI10C07
5-PRIME, mRNA sequence
Length = 614
Score = 311 bits (674), Expect = 1e-083
Identities = 128/173 (73%), Positives = 150/173 (86%)
Frame = +1 / +2
Query: 1504 EGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTL 1683
E +S PP+WA++MRF +NP KPMILAL+RPDPKKNITTLVKAFGE LR LANLTL
Sbjct: 95 EVSSDSPDPPVWADIMRFFSNPRKPMILALARPDPKKNITTLVKAFGEHHELRNLANLTL 274
Query: 1684 IMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVF 1863
IMGNRD ID+MS+ N +VLT+VLKLIDKYDLYG VA+PKHH Q++VP+IYRLAA+ KGVF
Sbjct: 275 IMGNRDVIDEMSSTNGAVLTSVLKLIDKYDLYGQVAYPKHHKQSEVPDIYRLAARTKGVF 454
Query: 1864 INPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIA 2022
IN A +EPFGLTLIEAAA+GLP+VAT+NGGPVDI L+NG+LVDPH+QN IA
Sbjct: 455 INCAYIEPFGLTLIEAAAYGLPMVATQNGGPVDIHRVLDNGILVDPHNQNDIA 613
Score = 200 bits (431), Expect = 4e-050
Identities = 99/158 (62%), Positives = 111/158 (70%)
Frame = -1 / -3
Query: 2000 GSTSSPLFNAFVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISG 1821
GST PL +STGPPF VATIG P AAASI+V PNGS A L+ TPF+LAA+R*ISG
Sbjct: 591 GSTRMPLSRTRCISTGPPFWVATIGRP*AAASIKVSPNGSI*AQLINTPFVLAAKR*ISG 412
Query: 1820 TSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSP 1641
TS L CLG AT P RSYLSI+ T V+T D+SS++S LPMI VRFA LS SP
Sbjct: 411 TSDCLWCLGYATCP*RSYLSINLSTDVKTAPFVLDISSITSRLPMINVRFAKFLSSWCSP 232
Query: 1640 NALTRVVMFFFGSGLDNARIIGL*GLVRNRITSAQIGG 1527
NALT VVMFF GSG ARI+GL G + RI SAQ GG
Sbjct: 231 NALTSVVMFFLGSGRARARIMGLRGFEKKRIISAQTGG 118
Score = 128 bits (275), Expect = 1e-028
Identities = 60/161 (37%), Positives = 101/161 (62%)
Frame = -3 / -2
Query: 2013 VLVVWVNEQSVV*CICNVDRTTILGSDYRESVCRSLDQGETKRLNESRVDEDALHFGREA 1834
+L+V +N+ ++V ++R TILGS++R ++ SLDQGE K N S V++ L R
Sbjct: 604 ILIVGINKNAIVKNPVYINRPTILGSNHR*TISSSLDQGEPKWFNISTVNKHPLCSCR*T 425
Query: 1833 IDLRDVSLIVMLRERHASVQIILVNQLQNCGEDTGIASRHVVDVISVTHDQSKVCKFPEW 1654
I++ + L+++L H ++IILVN L+ +++ I + H ++ I+VTHDQ KVC ++
Sbjct: 424 INIWNFRLLMVLGVCHLPIEIILVN*LEY*CQNSSICA*HFINNITVTHDQCKVC*ISQF 245
Query: 1653 TTLSKRFDEGSDVLLRVWS**RQDHRLVRVGQEPHHFGPNW 1531
+K ++ SDVLL +W+ ++H L RV +E H+ PNW
Sbjct: 244 MVFTKCLNQRSDVLLGIWTSKSKNHGLARVREEAHYISPNW 122
>gb|AV836706.1|AV836706 AV836706 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd26l03, mRNA sequence
Length = 555
Score = 291 bits (630), Expect = 2e-077
Identities = 119/174 (68%), Positives = 141/174 (81%)
Frame = +1 / +1
Query: 862 NDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNMSKALGEQVGNG 1041
N + GE+ G YI+RIP GPRD YL KE LWP++QEFVDGAL+HI+ MSK +GE++G G
Sbjct: 34 NSKQEKGENSGGYIIRIPFGPRDMYLTKERLWPFIQEFVDGALSHIVRMSKTIGEEIGCG 213
Query: 1042 RPVLPYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRMSKEEIDSTY 1221
PV P VIHGHYA AG AALLSGALN+PM TGH LG++KLE LLKQGR S+EEI+ TY
Sbjct: 214 HPVWPAVIHGHYASAGIAAALLSGALNLPMAFTGHFLGKDKLEGLLKQGRQSREEINMTY 393
Query: 1222 KIMRRIEGEELALDASELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARRGVS 1383
KIMRRIE EEL+LDASE+VI STRQEI+EQW LYDGF+V L + LRAR +RG +
Sbjct: 394 KIMRRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARVKRGAN 555
Score = 77.6 bits (163), Expect(2) = 2e-025
Identities = 41/86 (47%), Positives = 46/86 (53%)
Frame = -1 / -2
Query: 1382 LTPRLARALSTFSSLTSNPSYNPHCSSISCLVLVITXXXXXXXXXXXSIRLMILYVESIS 1203
L PRL A S +S+TS PSY HCSSISCLVL IT SIR +ILYV IS
Sbjct: 554 LAPRLTLARSFLASMTSKPSYKFHCSSISCLVLAITISEASRDNSSASIRRIILYVIFIS 375
Query: 1202 SLDMRXXXXXXXXXXXXSEWPVSTIG 1125
SLD R + PV+ IG
Sbjct: 374 SLD*RPCLRSPSSLSFPRKCPVNAIG 297
Score = 60.2 bits (125), Expect(2) = 2e-025
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -1 / -2
Query: 1064 IT*GSTGLPFPTCSPRALDMFRICARAPSTNSWR*GHNASFLRYLSRGPHGMRTM 900
IT G TG P P SP D+ I APSTNS GH S +RY+S GP+G+R M
Sbjct: 236 ITAGHTGCPQPISSPIVFDIRTIWLSAPSTNS*MKGHRRSLVRYISLGPNGIRMM 72
>gb|BM442430.2|BM442430 EBan01_SQ003_C15_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_C15 5', mRNA sequence
Length = 504
Score = 284 bits (615), Expect = 2e-075
Identities = 117/168 (69%), Positives = 138/168 (82%)
Frame = +1 / +1
Query: 2797 GARQTIAKLMGAQDGSGDAVEQDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCH 2976
GARQTI KLM +QDGSG+ VE DV S NAHCV+F ++DP+KV+T+D CH
Sbjct: 1 GARQTIGKLMASQDGSGNVVEPDVESCNAHCVSFFVRDPKKVRTIDEMRERLRMRGLRCH 180
Query: 2977 IMYCRNSTRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTV 3156
+MYCRNSTR+QVVPL+ASRSQAL+YL VRWG++VGNMYLI GEHGDTD EEMLSGLHKTV
Sbjct: 181 LMYCRNSTRMQVVPLMASRSQALKYLFVRWGLAVGNMYLIVGEHGDTDREEMLSGLHKTV 360
Query: 3157 IVRGVTEKGSEALVRSPGSYKRDDVVPSETPLAAYTTGELKADEIMRA 3300
IV+GVTEKGSE L+RS SY ++DVVP ++PL+A T GELK DEIMRA
Sbjct: 361 IVKGVTEKGSEDLLRSSRSYHKEDVVPVDSPLSATTRGELKFDEIMRA 504
Score = 204 bits (440), Expect = 2e-051
Identities = 96/168 (57%), Positives = 111/168 (66%)
Frame = -3 / -1
Query: 3300 SPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDATDDHGLV*PG*HLL* 3121
SPHDL+ LQL + G + RD++ +V AP + R L DA DD LV* HLL
Sbjct: 504 SPHDLIELQLAACGGR*GAIDRDNVFFVVTP*APQKILRAFLSDAFDDDRLV*S*KHLLA 325
Query: 3120 IGVAMFPGDQIHVPHRYAPAHGKIPECL*P*C*QRDNLKPCRVPAVHDVAAETTHPQPLP 2941
IGVAM P DQ+HVPH APAH ++ ECL*P*C +RDNL P RVPAVH+VA E THPQPLP
Sbjct: 324 IGVAMLPNDQVHVPHGQAPAHKEVLECL*P*CHERDNLHPRRVPAVHEVAPEATHPQPLP 145
Query: 2940 HLIDRFHLLGVFDEERDTVCITGRHVLLDSVA*TVLSAHELRYGLPRA 2797
HLI+ HLL V D+E D V I G HV LD +A VL HEL Y L A
Sbjct: 144 HLINSSHLLRVSDKEGDAVRIAGLHVRLDDIAGAVL*GHELPYRLSGA 1
Score = 176 bits (378), Expect = 9e-043
Identities = 88/167 (52%), Positives = 97/167 (58%)
Frame = +2 / +2
Query: 2798 ARGRP*RSSWALRTVQATLSSRTWRPVMHTVXXXXXXXXXXXXXXMR*GSG*GCVVSAAT 2977
A R * SSW RT A SSRTW P M T MR G G*GCV S AT
Sbjct: 2 APDRR*GSSWPHRTAPAMSSSRTWSPAMRTASPSLSETRRR*ELLMRCGRG*GCVASGAT 181
Query: 2978 SCTAGTRQGFRLSLC*HQGHRHSGIFPCAGAYLWGTCI*SPGNMATPI*RRCYPGYTRP* 3157
SCTAGTR+G RLSL HQGH+HS CAGA+ WGTC *S G+MATPI RRC+ YTR
Sbjct: 182 SCTAGTRRGCRLSLSWHQGHKHSSTSLCAGAWPWGTCT*SLGSMATPIARRCFQDYTRRS 361
Query: 3158 SSVASPRRVRKHW*GAQEATRGTMSSRLRPPWLRTRLVS*RPTRSCG 3298
SS AS R+ + +*GAQ T SR P+L S* RSCG
Sbjct: 362 SSKASLRKALRIF*GAQGVTTKKTLSRSIAPYLPPHAAS*SSMRSCG 502
Score = 156 bits (335), Expect = 8e-037
Identities = 77/140 (55%), Positives = 86/140 (61%)
Frame = +3 / +3
Query: 2880 CTLCRVPHQRPPKGENGR*DEGAAEDAWSPLPHHVLQELDKASGCPSASIKVTGTQVSFR 3059
C L + QRP +GEN *D G AEDAW P+P HVL ELD+ +GCPS IKVT TQV
Sbjct: 84 CALRLLLCQRPEEGENY**DAGEAEDAWPPVPPHVLPELDEDAGCPSHGIKVTSTQVPLC 263
Query: 3060 ALGRICGEHVSDHRGTWRHRSRGDAIRATQDRDRPWRHREGFGSTGEEPRKLQEGRCRPV 3239
ALG GEHV D G WRHRSRGDA R TQD R RH E + EE ++L + R P
Sbjct: 264 ALGLGRGEHVPDRWGAWRHRSRGDAFRTTQDGHRQRRH*ERL*GSSEELKELPQRRRCPG 443
Query: 3240 *DPLGCVHDW*AEGRRDHAG 3299
PL C H AE R DHAG
Sbjct: 444 R*PLICHHTRRAEVR*DHAG 503
Score = 130 bits (278), Expect(3) = 4e-034
Identities = 59/97 (60%), Positives = 64/97 (65%)
Frame = -1 / -2
Query: 3089 YMFPTDTPQRTERYLSACDLDASRGTT*SLVEFLQYMMWQXXXXXXXXXXXXSTVFTFWG 2910
YMFPT PQRT+RYLSACDLDA RGTT LVEF QYM W S V TF+G
Sbjct: 293 YMFPTAKPQRTKRYLSACDLDAMRGTTCILVEFRQYMRWHRRPRILSLSRISSIVLTFFG 114
Query: 2909 SLMRNATQCALLDATSCSTASPEPS*APMSFAMVCLA 2799
SL + TQCAL D+TS ST PEPS MSF +VCLA
Sbjct: 113 SLTKKETQCALQDSTSGSTTLPEPSCEAMSFPIVCLA 3
Score = 85.8 bits (181), Expect(2) = 3e-022
Identities = 49/97 (50%), Positives = 59/97 (60%)
Frame = -2 / -3
Query: 3298 PA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*RHGRSRSCVARIASPLD 3119
PA*S R SA + Q RG + G+ + L SS + S+*R R SCV ASP D
Sbjct: 502 PA*SHRTSARRVWWQIRGYRPGQRLLCGNSLSSSEDPQSLSQ*RL*R*PSCVVLKASPRD 323
Query: 3118 RCRHVPR*SDTCSPQIRPSARKDT*VPVTLMLAEGQP 3008
RCRH P+ S TCSP+ PSA++ T*V VTLM EGQP
Sbjct: 322 RCRHAPQRSGTCSPRPSPSAQRGT*VLVTLMP*EGQP 212
Score = 41.4 bits (84), Expect(2) = 3e-022
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -2 / -3
Query: 2911 GL**GTRHSVHYWTPRPARQRRLNRPERP*ASLWSASR 2798
GL* R S H TPRPAR+ +RP RP*ASL S R
Sbjct: 115 GL*QRRRRSAHCRTPRPARRHCRSRPVRP*ASLSSVWR 2
Score = 28.1 bits (55), Expect(3) = 4e-034
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / -2
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTP T+TVL
Sbjct: 389 EPFSVTPLTMTVL 351
Score = 26.7 bits (52), Expect(3) = 4e-034
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -2
Query: 3299 ARMISSAFSSPVVYAAK 3249
ARMISS FSSP V A K
Sbjct: 503 ARMISSNFSSPRVVADK 453
>gb|CK123660.1|CK123660 BES1824105a02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A025 5-PRIME, mRNA sequence
Length = 759
Score = 262 bits (566), Expect = 1e-068
Identities = 104/162 (64%), Positives = 128/162 (79%)
Frame = +1 / +1
Query: 1681 LIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGV 1860
LIMGNR+ I MS +A+VLT+VL LID+YDLYG VA+PKHH ++V +IYRLAA+ KG
Sbjct: 16 LIMGNREAISKMSNMSAAVLTSVLTLIDEYDLYGQVAYPKHHKHSEVLDIYRLAARTKGA 195
Query: 1861 FINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKL 2040
F+N A E FG+TLIEAA HGLP++ATKNG PV+I L+NGLLVDPHDQ+AIADAL KL
Sbjct: 196 FVNVAYFEQFGVTLIEAAMHGLPVIATKNGAPVEIHQVLDNGLLVDPHDQHAIADALYKL 375
Query: 2041 VADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNP 2166
++DK LW CR NGL+NIH +SWPEHC+ YL+R+ R P
Sbjct: 376 LSDKQLWSRCRENGLKNIHRFSWPEHCKNYLSRILTLSPRYP 501
Score = 116 bits (249), Expect(2) = 2e-027
Identities = 59/109 (54%), Positives = 71/109 (65%)
Frame = -1 / -2
Query: 2000 GSTSSPLFNAFVMSTGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISG 1821
GST PL N + +STG PF VA G PC AASI+V PN S A K PF+LAA+R*IS
Sbjct: 335 GSTRRPLSNTW*ISTGAPFFVAITGKPCMAASIKVTPNCSK*ATFTKAPFVLAAKR*ISR 156
Query: 1820 TSA*L*CLGNATLPYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVR 1674
TS L*C G AT PY+SY SI+ T V+T AL + ++S LP+I R
Sbjct: 155 TSECL*CFGYAT*PYKSYSSINVSTDVKTAALILLILEIASRLPIISGR 9
Score = 27.6 bits (54), Expect(2) = 2e-027
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1 / -2
Query: 2165 GFLNRHPATLVR*VRQCSGHE*RWMLRSPFLRH 2067
G+L L +* QCSG E R + SPF H
Sbjct: 500 GYLGLRVNILDK*FLQCSGQENRCIFFSPFSLH 402
>gb|CA018281.1|CA018281 HV08C15r HV Hordeum vulgare subsp. vulgare cDNA clone HV08C15
5-PRIME, mRNA sequence
Length = 613
Score = 135 bits (290), Expect(3) = 6e-064
Identities = 57/72 (79%), Positives = 63/72 (87%)
Frame = +1 / +2
Query: 634 KLYIVLISVHGLVRGENMELGRDSDTGGQVKYVVELARAMSMMPGVYRVDLFTRQVSSLD 813
KLYIVLIS+HGLVRGENMELGRDSDTGGQVKYVVE A+A+S PGVYRVDL TRQ+ + +
Sbjct: 305 KLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVEFAKALSSSPGVYRVDLLTRQILAPN 484
Query: 814 VDWSYGEPTEML 849
D SYGEP EML
Sbjct: 485 FDRSYGEPAEML 520
Score = 111 bits (236), Expect(3) = 6e-064
Identities = 44/81 (54%), Positives = 61/81 (75%)
Frame = +1 / +2
Query: 307 SDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLELEGIQRISARRKEQEQVRR 486
+DL++TW++ A R+ +ER+TRLENM WRIW+LARKKK+LE E R+ R E E+ R
Sbjct: 2 TDLYKTWLRANAMRSPQERNTRLENMTWRIWNLARKKKELEKEEACRLLKRHPETEKTRI 181
Query: 487 EATEDLAEDLSEGEKGDTIGE 549
+AT D++EDL EGEKG+ G+
Sbjct: 182 DATADMSEDLFEGEKGEDAGD 244
Score = 39.1 bits (79), Expect(3) = 6e-064
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1 / +2
Query: 862 NDGEGMGESGGAYIVRIPCGPRDKY 936
N + GE+ G YI+RIP GPRD Y
Sbjct: 539 NSKQEKGENSGGYIIRIPFGPRDMY 613
>gb|CB880803.1|CB880803 HM07O02w HM Hordeum vulgare subsp. vulgare cDNA clone HM07O02
3-PRIME, mRNA sequence
Length = 626
Score = 242 bits (523), Expect = 9e-063
Identities = 101/125 (80%), Positives = 114/125 (91%)
Frame = +1 / -1
Query: 2971 CHIMYCRNSTRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHK 3150
CH+MYCRNSTR+QVVPL+ASRSQALRYL VRWG++VGNMYLI GEHGDTD EEMLSGLHK
Sbjct: 602 CHLMYCRNSTRMQVVPLMASRSQALRYLFVRWGLAVGNMYLIVGEHGDTDREEMLSGLHK 423
Query: 3151 TVIVRGVTEKGSEALVRSPGSYKRDDVVPSETPLAAYTTGELKADEIMRALKQVSKTSSG 3330
TVIV+GVTEKGSE L+RS GSY ++DVVP ++PLAA T GELK+DEIMRALK+VSK SSG
Sbjct: 422 TVIVKGVTEKGSEDLLRSSGSYHKEDVVPVDSPLAATTRGELKSDEIMRALKEVSKASSG 243
Query: 3331 M*I*C 3345
M*I C
Sbjct: 242 M*IYC 228
Score = 186 bits (401), Expect = 6e-046
Identities = 82/133 (61%), Positives = 97/133 (72%)
Frame = -3 / +3
Query: 3345 ASNSHAAGSLGDLLQSPHDLVGLQLTSRVRSQGGLRRDDIVPLVASWAPHQCFRTLLGDA 3166
A + HAAGSLGDLL+SPHDL+GLQL + S G + RD+++ +V AP + R L DA
Sbjct: 228 AIDLHAAGSLGDLLESPHDLIGLQLAACGGS*GAIDRDNVLLVVTP*APQKILRAFLSDA 407
Query: 3165 TDDHGLV*PG*HLL*IGVAMFPGDQIHVPHRYAPAHGKIPECL*P*C*QRDNLKPCRVPA 2986
DD LV* HLL IGVAM P DQ+HVPH APAH ++PECL*P*C +RDNL P RVPA
Sbjct: 408 FDDDRLV*S*KHLLAIGVAMLPNDQVHVPHGQAPAHKEVPECL*P*CHERDNLHPRRVPA 587
Query: 2985 VHDVAAETTHPQP 2947
VH+VA E THPQP
Sbjct: 588 VHEVAPEATHPQP 626
Score = 168 bits (362), Expect = 1e-040
Identities = 79/130 (60%), Positives = 89/130 (68%)
Frame = +2 / -2
Query: 2948 G*GCVVSAATSCTAGTRQGFRLSLC*HQGHRHSGIFPCAGAYLWGTCI*SPGNMATPI*R 3127
G*GCV S ATSCTAGTR+G RLSL HQGH+HSG CAGA+ WGTC *S G+MATPI R
Sbjct: 625 G*GCVASGATSCTAGTRRGCRLSLSWHQGHKHSGTSLCAGAWPWGTCT*SLGSMATPIAR 446
Query: 3128 RCYPGYTRP*SSVASPRRVRKHW*GAQEATRGTMSSRLRPPWLRTRLVS*RPTRSCGL*S 3307
RC+ YTR SS AS R+ + +*GAQ T SR P L S* P RSCGL
Sbjct: 445 RCFQDYTRRSSSKASLRKALRIF*GAQGVTTRRTLSRSIAP*LPPHAAS*SPMRSCGLSR 266
Query: 3308 KSPRLPAACE 3337
+SPRLPAAC+
Sbjct: 265 RSPRLPAACK 236
Score = 166 bits (356), Expect = 1e-039
Identities = 77/132 (58%), Positives = 85/132 (64%)
Frame = +3 / -3
Query: 2949 AEDAWSPLPHHVLQELDKASGCPSASIKVTGTQVSFRALGRICGEHVSDHRGTWRHRSRG 3128
AEDAW P+P HVL ELD+ +GCPS IKVT TQV ALG GEHV D G WRHRSRG
Sbjct: 624 AEDAWPPVPPHVLPELDEDAGCPSHGIKVTSTQVPLCALGLGRGEHVPDRWGAWRHRSRG 445
Query: 3129 DAIRATQDRDRPWRHREGFGSTGEEPRKLQEGRCRPV*DPLGCVHDW*AEGRRDHAGSEA 3308
DA R TQD R RH E + EE R+L +G P PL C H AE R DHAGS+
Sbjct: 444 DAFRTTQDGHRQRRH*ERL*GSSEELRELPQGGRCPGR*PLSCHHTRRAEVR*DHAGSQG 265
Query: 3309 SLQDFQRHVNLM 3344
LQ FQRHVNL+
Sbjct: 264 GLQGFQRHVNLL 229
Score = 115 bits (246), Expect = 1e-024
Identities = 59/111 (53%), Positives = 70/111 (63%)
Frame = -2 / +2
Query: 3340 KFTCRWKSWRLASEPA*SRRPSAHQSCTQPRGSQTGRHRPSCSFLGSSPVLPNPSR*RHG 3161
+FTCRWK WR EPA*S R SA + Q RG + G+ P + L SS + S+*R
Sbjct: 233 RFTCRWKPWRPP*EPA*SHRTSARRVWWQLRGYRPGQRPPCGNSLSSSEDPQSLSQ*RL* 412
Query: 3160 RSRSCVARIASPLDRCRHVPR*SDTCSPQIRPSARKDT*VPVTLMLAEGQP 3008
R SCV ASP DRCRH P+ S TCSP+ PSA++ T*V VTLM EGQP
Sbjct: 413 R*PSCVVLKASPRDRCRHAPQRSGTCSPRPSPSAQRGT*VLVTLMP*EGQP 565
Score = 76.7 bits (161), Expect(3) = 3e-025
Identities = 31/39 (79%), Positives = 32/39 (82%)
Frame = -1 / +1
Query: 3089 YMFPTDTPQRTERYLSACDLDASRGTT*SLVEFLQYMMW 2973
YMFPT PQRT+RYLSACDLDA RGTT LVEF QYM W
Sbjct: 484 YMFPTAKPQRTKRYLSACDLDAMRGTTCILVEFRQYMRW 600
Score = 50.1 bits (103), Expect(3) = 3e-025
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = -1 / +1
Query: 3338 IHMPLEVLETCFRARMISSAFSSPVVYAAK 3249
I+MPLE LET RARMISS FSSP V AAK
Sbjct: 235 IYMPLEALETSLRARMISSDFSSPRVVAAK 324
Score = 28.1 bits (55), Expect(3) = 3e-025
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1 / +1
Query: 3185 EPFSVTPRTITVL 3147
EPFSVTP T+TVL
Sbjct: 388 EPFSVTPLTMTVL 426
>gb|BF628946.2|BF628946 HVSMEb0009E18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009E18f, mRNA sequence
Length = 867
Score = 140 bits (301), Expect(3) = 1e-056
Identities = 55/99 (55%), Positives = 76/99 (76%)
Frame = +1 / +1
Query: 253 NFNPSHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLEL 432
+F+P+ YFVEEV+ G DE+DL++TW++ A R+ +ER+TRLENM WRIW+LARKKK+LE
Sbjct: 187 HFSPARYFVEEVITGYDETDLYKTWLRANAMRSPQERNTRLENMTWRIWNLARKKKELEK 366
Query: 433 EGIQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGE 549
E R+ R E E+ R +AT D++EDL EGEKG+ G+
Sbjct: 367 EEACRLLKRHPETEKTRIDATADMSEDLFEGEKGEDAGD 483
Score = 91.3 bits (193), Expect(3) = 1e-056
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +1 / +1
Query: 634 KLYIVLISVHGLVRGENMELGRDSDTGGQVKYVVELARAMSMMPGVYRVD 783
KLYIVLIS+HG VRGENMELGRDSDTGG +YVVE A+A+S PGVY +D
Sbjct: 544 KLYIVLISLHGSVRGENMELGRDSDTGGXGQYVVEFAKALSSSPGVYGLD 693
Score = 29.0 bits (57), Expect(3) = 1e-056
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 112 MAGNEWINGYLEAILDSHTSS 174
+ + WIN YL+AILD+ S+
Sbjct: 82 VGNDNWINSYLDAILDAGKSA 144
>gb|BG309288.2|BG309288 HVSMEc0007B10f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0007B10f, mRNA sequence
Length = 808
Score = 199 bits (430), Expect = 6e-050
Identities = 87/142 (61%), Positives = 106/142 (74%)
Frame = +1 / +3
Query: 952 LWPYLQEFVDGALAHILNMSKALGEQVGNGRPVLPYVIHGHYADAGDVAALLSGALNVPM 1131
+W Y+QEFVDGAL+HI++MSK +GE++G G P+ P VIHGHYA AG AAL+SGALNV M
Sbjct: 3 VWAYVQEFVDGALSHIVHMSKIIGEEIGCGHPMWPAVIHGHYASAGVAAALISGALNVHM 182
Query: 1132 VLTGHSLGRNKLEQLLKQGRMSKEEIDSTYKIMRRIEGEELALDASELVITSTRQEIDEQ 1311
V TGH LG++KLE LLKQG K + TYKIMR IE EELAL ASE+VI ST Q+I E
Sbjct: 183 VFTGHFLGKDKLEGLLKQGETDKGRNNMTYKIMRPIEAEELALGASEIVIASTLQKIKEH 362
Query: 1312 WGLYDGFDVKLEKVLRARARRG 1377
W L DG +V + L A+ +RG
Sbjct: 363 WILVDGLEVWPARKLWAKIKRG 428
>gb|BF619008.2|BF619008 HVSMEc0008G05f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0008G05f, mRNA sequence
Length = 590
Score = 178 bits (384), Expect(2) = 5e-049
Identities = 78/128 (60%), Positives = 96/128 (75%)
Frame = +1 / +3
Query: 1579 MILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDDMSAGNASVLTTVLKL 1758
+ILA++RP P+KNITTLVKAFGECRPLRELANLTLIMGNR+ I MS +A+VLT+VL L
Sbjct: 60 VILAVARPYPEKNITTLVKAFGECRPLRELANLTLIMGNREAISKMSNMSAAVLTSVLTL 239
Query: 1759 IDKYDLYGSVAFPKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVA 1938
ID+YDLYG VA+PKHH ++V +IYRLAAK +G F+N A + G+TLIE
Sbjct: 240 IDEYDLYGQVAYPKHHKHSEVLDIYRLAAKTRGAFVNVAYFKQCGVTLIEGCMPWFTCNC 419
Query: 1939 TKNGGPVD 1962
TK V+
Sbjct: 420 TKKWSSVE 443
Score = 110 bits (235), Expect(2) = 8e-025
Identities = 62/127 (48%), Positives = 76/127 (59%)
Frame = -1 / -2
Query: 1961 STGPPFLVATIGSPCAAASIRVRPNGSTRAGLMKTPFILAARR*ISGTSA*L*CLGNATL 1782
ST FLV + SI+V P+ A K P + AA+R*IS TS L*C G AT
Sbjct: 442 STELHFLVQLQVNQGMQPSIKVTPHCLK*ATFTKAPLVFAAKR*ISRTSECL*CFGYAT* 263
Query: 1781 PYRSYLSISFRTVVRTLALPADMSSMSSLLPMIRVRFASSLSGRHSPNALTRVVMFFFGS 1602
PY+SY SI+ T V+T AL + ++S LP+I VR ASSL+G HSP A T VV+FF G
Sbjct: 262 PYKSYSSINVSTDVKTAALILLILEIASRLPIISVRLASSLNGLHSPKAFTSVVIFFSGY 83
Query: 1601 GLDNARI 1581
G ARI
Sbjct: 82 GRATARI 62
Score = 38.2 bits (77), Expect(2) = 5e-049
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +1 / +2
Query: 1528 PPIWAEVMRFLTNPHK 1575
PPIW+E+MRF TNP K
Sbjct: 8 PPIWSEIMRFFTNPRK 55
Score = 25.4 bits (49), Expect(2) = 8e-025
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 1568 GLVRNRITSAQIGG 1527
G V+NRI S QIGG
Sbjct: 48 GFVKNRIISDQIGG 7
>gb|BU985379.1|BU985379 HF06P13r HF Hordeum vulgare subsp. vulgare cDNA clone HF06P13
5-PRIME, mRNA sequence
Length = 559
Score = 190 bits (410), Expect = 3e-047
Identities = 74/129 (57%), Positives = 97/129 (75%)
Frame = +1 / +2
Query: 1879 VEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALLKLVADKNL 2058
+EPFGLTLIEAAA+GLP+VAT+NGGPVDI L+NG+LVDPH+QN IA+AL +LV+DK L
Sbjct: 11 IEPFGLTLIEAAAYGLPMVATQNGGPVDIHRVLDNGILVDPHNQNDIAEALYRLVSDKQL 190
Query: 2059 WQECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADEEEFLEDSMDA 2238
W +CR+NGL NIH +SWPEHC+ YL+RV + R+PRW + A ++ + + D
Sbjct: 191 WAQCRKNGLENIHRFSWPEHCKNYLSRVGTLKSRHPRWQRSDDATEVSETDSPGDSLRDI 370
Query: 2239 QDLSLRLSI 2265
D+SL L I
Sbjct: 371 HDISLNLKI 397
>gb|CA026869.1|CA026869 HZ57D09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57D09
5-PRIME, mRNA sequence
Length = 431
Score = 149 bits (320), Expect(2) = 1e-043
Identities = 58/97 (59%), Positives = 77/97 (79%)
Frame = +1 / +2
Query: 259 NPSHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLELEG 438
NP+ YFVEEV+ G DE+DL++TW++ A R+ +ER+TRLENM WRIW+LARKKKQ+E E
Sbjct: 2 NPARYFVEEVISGFDETDLYKTWVRTSAMRSPQERNTRLENMSWRIWNLARKKKQIEGEE 181
Query: 439 IQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGE 549
R S +R E+E+ RR+A DL+EDLS+GEKG+ I E
Sbjct: 182 ASRSSKKRLEREKARRDAAADLSEDLSDGEKGENINE 292
Score = 49.6 bits (102), Expect(2) = 1e-043
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +1 / +2
Query: 601 LTVWSDDNKEKKLYIVLISVHGLVRG 678
+ VW++ +K+KKLYIVLIS+HGL+RG
Sbjct: 353 IDVWANQHKDKKLYIVLISIHGLIRG 430
>gb|BG366918.2|BG366918 HVSMEi0008P16f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0008P16f, mRNA sequence
Length = 495
Score = 178 bits (383), Expect = 2e-043
Identities = 70/104 (67%), Positives = 84/104 (80%)
Frame = +1 / +2
Query: 1834 RLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQN 2013
++ AK++ V++ PALVEP LT+IEAAA+GLP+VATKNGGPVDI AL+NGLLVDPH
Sbjct: 32 KMEAKLRIVYLYPALVEPLSLTIIEAAAYGLPVVATKNGGPVDILKALHNGLLVDPHSGE 211
Query: 2014 AIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVA 2145
AI ALL L+A+K W ECRRNGLRNIH +SWP HCR YL+ VA
Sbjct: 212 AITGALLSLLAEKGQWSECRRNGLRNIHRFSWPHHCRLYLSHVA 343
Score = 104 bits (222), Expect = 3e-021
Identities = 52/92 (56%), Positives = 55/92 (59%)
Frame = -1 / -1
Query: 2144 ATLVR*VRQCSGHE*RWMLRSPFLRHSCHRXXXXXXXXXXXXXXXXSCGSTSSPLFNAFV 1965
AT R* RQ GHE RWMLR P RHS H CGSTS PL +A
Sbjct: 342 ATWER*RRQWCGHEKRWMLRRPLRRHSDHCPFSASRLSSAPVIASPECGSTSRPL*SALR 163
Query: 1964 MSTGPPFLVATIGSPCAAASIRVRPNGSTRAG 1869
MSTGPPFLVAT G P AAAS+ VR +GSTRAG
Sbjct: 162 MSTGPPFLVATTGRP*AAASMIVRLSGSTRAG 67
>gb|BU975604.1|BU975604 HB31K24r BC Hordeum vulgare subsp. vulgare cDNA clone HB31K24
5-PRIME, mRNA sequence
Length = 563
Score = 118 bits (252), Expect(2) = 3e-038
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = +1 / +3
Query: 1963 ITNALNNGLLVDPHDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRV 2142
+ LNNGLLVDPHDQNAIADAL KL+++K LW CR NGL+NIH +SWPEHC+ +L+R+
Sbjct: 240 LMQVLNNGLLVDPHDQNAIADALYKLLSEKQLWSRCRENGLKNIHQFSWPEHCKNHLSRI 419
Query: 2143 AGCRLRNP 2166
+R+P
Sbjct: 420 LTLGMRSP 443
Score = 62.5 bits (130), Expect(2) = 3e-038
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +1 / +2
Query: 1855 GVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDI 1965
G F+N A E FG+TLIEAA +GLP++ATKNG PV+I
Sbjct: 23 GAFVNVAYFEQFGVTLIEAAMNGLPVIATKNGAPVEI 133
>gb|BQ471768.1|BQ471768 HV03G17r HV Hordeum vulgare subsp. vulgare cDNA clone HV03G17
5-PRIME, mRNA sequence
Length = 602
Score = 140 bits (301), Expect(3) = 2e-037
Identities = 55/99 (55%), Positives = 76/99 (76%)
Frame = +1 / +1
Query: 253 NFNPSHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLEL 432
+F+P+ YFVEEV+ G DE+DL++TW++ A R+ +ER+TRLENM WRIW+LARKKK+LE
Sbjct: 211 HFSPARYFVEEVITGYDETDLYKTWLRANAMRSPQERNTRLENMTWRIWNLARKKKELEK 390
Query: 433 EGIQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGE 549
E R+ R E E+ R +AT D++EDL EGEKG+ G+
Sbjct: 391 EEACRLLKRHPETEKTRIDATADMSEDLFEGEKGEDAGD 507
Score = 29.0 bits (57), Expect(3) = 2e-037
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / +1
Query: 112 MAGNEWINGYLEAILDSHTSS 174
+ + WIN YL+AILD+ S+
Sbjct: 106 VGNDNWINSYLDAILDAGKSA 168
Score = 26.3 bits (51), Expect(3) = 2e-037
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / +1
Query: 634 KLYIVLISVHG 666
KLYIVLIS+HG
Sbjct: 568 KLYIVLISLHG 600
>gb|CA003686.1|CA003686 HS15E01r HS Hordeum vulgare subsp. vulgare cDNA clone HS15E01
5-PRIME, mRNA sequence
Length = 449
Score = 138 bits (295), Expect(2) = 4e-034
Identities = 54/95 (56%), Positives = 74/95 (77%)
Frame = +1 / +3
Query: 253 NFNPSHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLEL 432
+F+P+ YFVEEV+ G DE+DL++TW++ A R+ +ER+TRLENM WRIW+LARKKK+LE
Sbjct: 159 HFSPARYFVEEVITGYDETDLYKTWLRANAMRSPQERNTRLENMTWRIWNLARKKKELEK 338
Query: 433 EGIQRISARRKEQEQVRREATEDLAEDLSEGEKGD 537
E R+ R E E+ R +AT D++EDL EGEKG+
Sbjct: 339 EEACRLLKRHPETEKTRIDATADMSEDLFEGEKGE 443
Score = 29.0 bits (57), Expect(2) = 4e-034
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1 / +3
Query: 112 MAGNEWINGYLEAILDSHTSS 174
+ + WIN YL+AILD+ S+
Sbjct: 54 VGNDNWINSYLDAILDAGKSA 116
>gb|CD662445.1|CD662445 UCRHV18_01cb12_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01cb12, mRNA sequence
Length = 898
Score = 115 bits (245), Expect(2) = 1e-032
Identities = 43/103 (41%), Positives = 66/103 (64%)
Frame = +1 / -1
Query: 2860 QDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQ 3039
+D S+ C+AF + +P + + CH +Y ++TRL V+P+ ASRSQ
Sbjct: 601 EDAEHSSTSCLAFRVVNPNYLPPLKELQKLMRIQSLRCHALYNHSATRLSVIPIHASRSQ 422
Query: 3040 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
ALRYLSVRWG+ + N+ ++ GE GD+D EE+ GLHKT++++G
Sbjct: 421 ALRYLSVRWGIELRNVVILVGESGDSDYEELFGGLHKTIVLKG 293
Score = 51.9 bits (107), Expect(2) = 1e-032
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +1 / -1
Query: 2584 SGFTLSTAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYP 2709
+GF LST + +SE LL + TDFDA IC SGS+++YP
Sbjct: 898 TGFVLSTPLTMSEIHSLLISAGMAPTDFDAFICNSGSDLFYP 773
>gb|BM442070.2|BM442070 EBan01_SQ002_B15_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ002_B15 5', mRNA sequence
Length = 260
Score = 94.1 bits (199), Expect(2) = 7e-032
Identities = 39/47 (82%), Positives = 42/47 (89%)
Frame = +1 / +1
Query: 3019 LLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVI 3159
L+AS SQALRYL VRWG++VGNMYLI GEHGDTD EEMLS LHKTVI
Sbjct: 1 LMASMSQALRYLFVRWGLAVGNMYLIVGEHGDTDREEMLSRLHKTVI 141
Score = 65.7 bits (137), Expect(2) = 7e-032
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1 / +2
Query: 3160 VRGVTEKGSEALVRSPGSYKRDDVVPSETPLAAYTTGEL 3276
V+GVTEKGSE L+RS GSY ++DVVP ++PLAA T GEL
Sbjct: 143 VKGVTEKGSEDLLRSSGSYHKEDVVPGDSPLAATTRGEL 259
>gb|BQ661019.1|BQ661019 HM01I14w HM Hordeum vulgare subsp. vulgare cDNA clone HM01I14
3-PRIME, mRNA sequence
Length = 456
Score = 133 bits (286), Expect = 4e-030
Identities = 59/76 (77%), Positives = 67/76 (88%)
Frame = +1 / -3
Query: 3118 DLEEMLSGLHKTVIVRGVTEKGSEALVRSPGSYKRDDVVPSETPLAAYTTGELKADEIMR 3297
D EEMLSGLHKTVIV+GVTEKGSE L+RS GSY ++DVVP ++PLAA T GELK+DEIMR
Sbjct: 454 DREEMLSGLHKTVIVKGVTEKGSEDLLRSSGSYHKEDVVPVDSPLAATTRGELKSDEIMR 275
Query: 3298 ALKQVSKTSSGM*I*C 3345
ALK+VSK SSGM*I C
Sbjct: 274 ALKEVSKASSGM*IYC 227
>gb|BQ472479.1|BQ472479 HB09H08T BC Hordeum vulgare subsp. vulgare cDNA clone HB09H08
5-PRIME, mRNA sequence
Length = 642
Score = 104 bits (221), Expect(2) = 9e-030
Identities = 38/61 (62%), Positives = 46/61 (75%)
Frame = +1 / +2
Query: 1984 GLLVDPHDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRN 2163
G VDPHDQ+AIADAL KL++DK LW CR NGL+NIH +SWPEHC+ YL+R+ R
Sbjct: 2 GTRVDPHDQHAIADALYKLLSDKQLWSRCRENGLKNIHRFSWPEHCKNYLSRILTLSPRY 181
Query: 2164 P 2166
P
Sbjct: 182 P 184
Score = 52.8 bits (109), Expect(2) = 9e-030
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +1 / +2
Query: 2584 SGFTLSTAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYP 2709
+GF LST++ +SE LL + TDFDA IC SGS+++YP
Sbjct: 338 TGFVLSTSLTMSEIHSLLISAGMAPTDFDAFICNSGSDLFYP 463
>gb|BQ471087.1|BQ471087 HX04O21r HX Hordeum vulgare subsp. vulgare cDNA clone HX04O21
5-PRIME, mRNA sequence
Length = 268
Score = 92.3 bits (195), Expect(2) = 1e-029
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +1 / +1
Query: 862 NDGEGMGESGGAYIVRIPCGPRDKYLKKEALWPYLQEFVDGALAHILNM 1008
N G+ MGES GAYIVRIP GPR+KY+ KE LWP++QEFVDGAL HI+ M
Sbjct: 121 NLGDDMGESSGAYIVRIPFGPREKYIPKEQLWPHIQEFVDGALVHIMQM 267
Score = 59.7 bits (124), Expect(2) = 1e-029
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1 / +1
Query: 772 YRVDLFTRQVSSLDVDWSYGEPTEMLCAGSNDGEG 876
YRVDL TRQ+S+ DVDWSYGEPTEML +++ G
Sbjct: 25 YRVDLLTRQISAPDVDWSYGEPTEMLSPRNSENLG 129
>gb|BE437516.1|BE437516 SFR004.E11F990621 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 804
Score = 105 bits (225), Expect(2) = 2e-029
Identities = 41/103 (39%), Positives = 65/103 (63%)
Frame = +1 / +2
Query: 2860 QDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQ 3039
+D S+ +C+AF + +P + + C+ +Y ++TRL V P+ ASRSQ
Sbjct: 350 EDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQ 529
Query: 3040 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
A+RYL VRWG+ + N+ +I GE GD+D EE+L GLH+T+ ++G
Sbjct: 530 AIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTINLKG 658
Score = 50.1 bits (103), Expect(2) = 2e-029
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1 / +2
Query: 2581 ISGFTLSTAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYPGTANCMDAEGKL 2745
++GF LST++ +SE LL + FDA IC SGS +YYP + + K+
Sbjct: 50 LTGFVLSTSLTISEICSLLVSVGMHPAGFDAFICNSGSSIYYPSYSGNTPSNSKV 214
>gb|BU989121.1|BU989121 HF19N21r HF Hordeum vulgare subsp. vulgare cDNA clone HF19N21
5-PRIME, mRNA sequence
Length = 499
Score = 78.5 bits (165), Expect(2) = 3e-029
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = +1 / +1
Query: 1564 NPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANL 1677
+P KP+ILA++RP P+KNITTLVKAFGECRPLRELANL
Sbjct: 10 DPRKPLILAVARPYPEKNITTLVKAFGECRPLRELANL 123
Score = 76.2 bits (160), Expect(2) = 3e-029
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +1 / +3
Query: 1678 TLIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAFPKHHNQADV 1821
TLIMGNR+ I MS +A+VLT+VL LID+YDLYG VA+PKHH ++V
Sbjct: 348 TLIMGNREAISKMSNMSAAVLTSVLTLIDEYDLYGQVAYPKHHKHSEV 491
>gb|CA012374.1|CA012374 HT05E02r HT Hordeum vulgare subsp. vulgare cDNA clone HT05E02
5-PRIME, mRNA sequence
Length = 422
Score = 99.1 bits (210), Expect(3) = 9e-028
Identities = 36/59 (61%), Positives = 50/59 (84%)
Frame = +1 / +1
Query: 253 NFNPSHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIWHLARKKKQLE 429
+F+P+ YFVEEV+ G DE+DL++TW + A R+ +ER+TRLENM WRIW+LARKKK++E
Sbjct: 43 HFSPARYFVEEVITGYDETDLYKTWSRANAMRSPQERNTRLENMTWRIWNLARKKKEVE 219
Score = 40.9 bits (83), Expect(3) = 9e-028
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +1 / +1
Query: 457 RRKEQEQVRREATEDLAEDLSEGEKGDTIGE 549
RR E E+ R +AT +++EDL EGEKG+ G+
Sbjct: 238 RRLETEKPRTDATAEMSEDLFEGEKGEDAGD 330
Score = 23.5 bits (45), Expect(3) = 9e-028
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 634 KLYIVLISVH 663
KLYIVLIS+H
Sbjct: 391 KLYIVLISLH 420
>gb|BU985680.1|BU985680 HF08E20r HF Hordeum vulgare subsp. vulgare cDNA clone HF08E20
5-PRIME, mRNA sequence
Length = 589
Score = 111 bits (238), Expect(2) = 6e-027
Identities = 42/88 (47%), Positives = 59/88 (67%)
Frame = +1 / +2
Query: 2002 HDQNAIADALLKLVADKNLWQECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKD 2181
H+QN IA+AL +LV+DK LW +CR+NGL NIH +SWPEHC+ YL+RV + R+PRW +
Sbjct: 11 HNQNDIAEALYRLVSDKQLWAQCRKNGLENIHRFSWPEHCKNYLSRVGTLKSRHPRWQRS 190
Query: 2182 TPADAGADEEEFLEDSMDAQDLSLRLSI 2265
A ++ + + D D+SL L I
Sbjct: 191 DDATEVSETDSPGDSLRDIHDISLNLKI 274
Score = 35.4 bits (71), Expect(2) = 6e-027
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1 / +2
Query: 2434 NKYPLLRRRRRLFVIAVDCYQD 2499
NK+P LRRR+ + VIAVD QD
Sbjct: 434 NKWPSLRRRKHIVVIAVDSVQD 499
>gb|BJ454449.1|BJ454449 BJ454449 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak24h18 5', mRNA sequence
Length = 405
Score = 122 bits (261), Expect = 1e-026
Identities = 50/126 (39%), Positives = 76/126 (60%)
Frame = +1 / +3
Query: 2818 KLMGAQDGSGDAVEQDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNS 2997
+L A D + D ++ + HC A+ D KV+ VD C+++Y R
Sbjct: 27 RLGRADDALASDLAVDASACSVHCHAYAATDASKVRKVDSIRQQLRMRGFRCNLVYTRAC 206
Query: 2998 TRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRGVTE 3177
TRL V+PL ASR +ALRYLS++WG+ + + ++ GE GDTD E++L GLH+T+I+ G+
Sbjct: 207 TRLNVIPLSASRPRALRYLSIQWGIDLSKVAVLVGEAGDTDREKLLPGLHRTLILPGMVS 386
Query: 3178 KGSEAL 3195
+GSE L
Sbjct: 387 RGSEQL 404
>gb|AV833883.1|AV833883 AV833883 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp. vulgare
cDNA clone bags18o22, mRNA sequence
Length = 629
Score = 74.4 bits (156), Expect(3) = 1e-024
Identities = 28/67 (41%), Positives = 41/67 (61%)
Frame = +1 / +1
Query: 2065 ECRRNGLRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGADEEEFLEDSMDAQD 2244
+ R+NGL NIH +SWPEHC+ YL+RV + R+PRW + A ++ + + D D
Sbjct: 4 QXRKNGLENIHRFSWPEHCKNYLSRVGTLKSRHPRWQRSDDATEVSETDSPGDSLRDIHD 183
Query: 2245 LSLRLSI 2265
+SL L I
Sbjct: 184 ISLNLKI 204
Score = 51.0 bits (105), Expect(3) = 1e-024
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1 / +1
Query: 2587 GFTLSTAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYPGT 2715
GF LST+ +SE LL G I DFDA IC SGS++ YP +
Sbjct: 499 GFVLSTSRAVSEIHPLLTSGGIEIADFDAFICSSGSDLCYPSS 627
Score = 35.4 bits (71), Expect(3) = 1e-024
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1 / +1
Query: 2434 NKYPLLRRRRRLFVIAVDCYQD 2499
NK+P LRRR+ + VIAVD QD
Sbjct: 364 NKWPSLRRRKHIVVIAVDSXQD 429
>gb|BG416908.2|BG416908 HVSMEk0015C11f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0015C11f, mRNA sequence
Length = 488
Score = 115 bits (246), Expect = 1e-024
Identities = 43/107 (40%), Positives = 68/107 (63%)
Frame = +1 / +3
Query: 2848 DAVEQDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLA 3027
+AV +D S+ +C++F +K+ + V V CH++Y + ++L +P+LA
Sbjct: 159 EAVTEDDECSSTYCISFKVKNTEAVPPVKDLRKTMRIQALRCHVLYSHDGSKLNFIPVLA 338
Query: 3028 SRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
SRSQALRYL +RWGV + M ++ GE GDTD E +L G+ KT+I++G
Sbjct: 339 SRSQALRYLYIRWGVELSKMTVVVGESGDTDYEGLLGGMQKTIILKG 479
>gb|BQ767300.1|BQ767300 EBro08_SQ008_C18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_C18 5', mRNA sequence
Length = 629
Score = 115 bits (246), Expect = 1e-024
Identities = 43/107 (40%), Positives = 68/107 (63%)
Frame = +1 / +1
Query: 2848 DAVEQDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLA 3027
+AV +D S+ +C++F +K+ + V V CH++Y + ++L +P+LA
Sbjct: 43 EAVTEDDECSSTYCISFKVKNTEAVPPVKDLRKTMRIQALRCHVLYSHDGSKLNFIPVLA 222
Query: 3028 SRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
SRSQALRYL +RWGV + M ++ GE GDTD E +L G+ KT+I++G
Sbjct: 223 SRSQALRYLYIRWGVELSKMTVVVGESGDTDYEGLLGGMQKTIILKG 363
>gb|BJ466481.1|BJ466481 BJ466481 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g04 3', mRNA sequence
Length = 688
Score = 115 bits (245), Expect = 2e-024
Identities = 43/103 (41%), Positives = 66/103 (64%)
Frame = +1 / -3
Query: 2860 QDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQ 3039
+D S+ C+AF + +P + + CH +Y ++TRL V+P+ ASRSQ
Sbjct: 530 EDAEHSSTSCLAFRVVNPNYLPPLKELQKLMRIQSLRCHALYNHSATRLSVIPIHASRSQ 351
Query: 3040 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
ALRYLSVRWG+ + N+ ++ GE GD+D EE+ GLHKT++++G
Sbjct: 350 ALRYLSVRWGIELRNVVILVGESGDSDYEELFGGLHKTIVLKG 222
>gb|BU984860.1|BU984860 HF05E11r HF Hordeum vulgare subsp. vulgare cDNA clone HF05E11
5-PRIME, mRNA sequence
Length = 584
Score = 115 bits (245), Expect = 2e-024
Identities = 43/103 (41%), Positives = 66/103 (64%)
Frame = +1 / +1
Query: 2860 QDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQ 3039
+D S+ C+AF + +P + + CH +Y ++TRL V+P+ ASRSQ
Sbjct: 199 EDAEHSSTSCLAFRVVNPNYLPPLKELQKLMRIQSLRCHALYNHSATRLSVIPIHASRSQ 378
Query: 3040 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
ALRYLSVRWG+ + N+ ++ GE GD+D EE+ GLHKT++++G
Sbjct: 379 ALRYLSVRWGIELRNVVILVGESGDSDYEELFGGLHKTIVLKG 507
>gb|CA022248.1|CA022248 HZ42J07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42J07
5-PRIME, mRNA sequence
Length = 594
Score = 115 bits (245), Expect = 2e-024
Identities = 43/103 (41%), Positives = 66/103 (64%)
Frame = +1 / +3
Query: 2860 QDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQ 3039
+D S+ C+AF + +P + + CH +Y ++TRL V+P+ ASRSQ
Sbjct: 81 EDAEHSSTSCLAFRVVNPNYLPPLKELQKLMRIQSLRCHALYNHSATRLSVIPIHASRSQ 260
Query: 3040 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
ALRYLSVRWG+ + N+ ++ GE GD+D EE+ GLHKT++++G
Sbjct: 261 ALRYLSVRWGIELRNVVILVGESGDSDYEELFGGLHKTIVLKG 389
>gb|CA015292.1|CA015292 HT13N20r HT Hordeum vulgare subsp. vulgare cDNA clone HT13N20
5-PRIME, mRNA sequence
Length = 544
Score = 114 bits (244), Expect = 3e-024
Identities = 43/108 (39%), Positives = 67/108 (62%)
Frame = +1 / +2
Query: 2845 GDAVEQDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLL 3024
G V +D S+ +C++F +K+ + V V CH++Y + ++L +P+L
Sbjct: 2 GTRVTEDDECSSTYCISFKVKNTEAVPPVKDLRKTMRIQALRCHVLYSHDGSKLNFIPVL 181
Query: 3025 ASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
ASRSQALRYL +RWGV + M ++ GE GDTD E +L G+ KT+I++G
Sbjct: 182 ASRSQALRYLYIRWGVELSKMTVVVGESGDTDYEGLLGGMQKTIILKG 325
>gb|BU968420.1|BU968420 HB07H08r BC Hordeum vulgare subsp. vulgare cDNA clone HB07H08
5-PRIME, mRNA sequence
Length = 533
Score = 64.3 bits (134), Expect(3) = 5e-024
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1 / +2
Query: 1984 GLLVDPHDQNAIADALLKLVADKNLWQECRRNGLR 2088
G VDPHDQ+AIADAL KL++DK LW CR NGL+
Sbjct: 2 GTRVDPHDQHAIADALYKLLSDKQLWSRCRENGLK 106
Score = 52.8 bits (109), Expect(3) = 5e-024
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +1 / +1
Query: 2584 SGFTLSTAMPLSETLQLLQLGKIPATDFDALICGSGSEVYYP 2709
+GF LST++ +SE LL + TDFDA IC SGS+++YP
Sbjct: 337 TGFVLSTSLTMSEIHSLLISAGMAPTDFDAFICNSGSDLFYP 462
Score = 40.9 bits (83), Expect(3) = 5e-024
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1 / +1
Query: 2074 RNGLRNIHLYSWPEHCRTYLTRVAGCRLRNP 2166
R IH +SWPEHC+ YL+R+ R P
Sbjct: 91 RKWAEKIHRFSWPEHCKNYLSRILTLSPRYP 183
>emb|X65871.1|HVSSYNMR H.vulgare mRNA for sucrose synthase
Length = 2667
Score = 74.4 bits (156), Expect(5) = 9e-024
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +1 / +1
Query: 1825 EIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPH 2004
E+YR KG F+ PA E FGLT+IEA GLP +AT +GGP +I +GL +DP+
Sbjct: 1948 ELYRYICDTKGAFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPY 2127
Query: 2005 DQNAIADALL 2034
+ AD L+
Sbjct: 2128 HSDKAADILV 2157
Score = 45.1 bits (92), Expect(5) = 9e-024
Identities = 18/46 (39%), Positives = 33/46 (71%)
Frame = +1 / +1
Query: 1558 LTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGN 1695
L + +KP+I +++R D KN+T LV+ +G+ L++LANL ++ G+
Sbjct: 1681 LKDRNKPIIFSMARLDRVKNMTGLVEMYGKNAHLKDLANLVIVAGD 1818
Score = 29.9 bits (59), Expect(5) = 9e-024
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1 / +1
Query: 1054 PYVIHGHYADAGDVAALLSGALNVPMVLTGHSLGRNK 1164
P +I G+Y+D VA LL+ L V H+L + K
Sbjct: 1204 PDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTK 1314
Score = 28.1 bits (55), Expect(5) = 9e-024
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 1201 EEIDSTYKIMRRIEGEELALDASELVITSTRQEI 1302
++ DS Y + + +A++ ++ +ITST QEI
Sbjct: 1339 DKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEI 1440
Score = 26.7 bits (52), Expect(5) = 9e-024
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1 / +1
Query: 706 DTGGQVKYVVELARAM 753
DTGGQV Y+++ RA+
Sbjct: 883 DTGGQVVYILDQVRAL 930
>gb|AV917170.1|AV917170 AV917170 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8c04 5', mRNA sequence
Length = 630
Score = 111 bits (236), Expect = 3e-023
Identities = 43/108 (39%), Positives = 68/108 (62%)
Frame = +1 / +2
Query: 2845 GDAVEQDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLL 3024
G + +D S+ +C+AF + +P + + C+ +Y ++TRL V P+
Sbjct: 53 GXMIFEDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIH 232
Query: 3025 ASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
ASRSQA+RYL VRWG+ + N+ +I GE GD+D EE+L GLH+T+I++G
Sbjct: 233 ASRSQAIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKG 376
>gb|AV914348.1|AV914348 AV914348 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5m14 5', mRNA sequence
Length = 475
Score = 109 bits (232), Expect = 1e-022
Identities = 42/103 (40%), Positives = 66/103 (64%)
Frame = +1 / +1
Query: 2860 QDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQ 3039
+D S+ +C+AF + +P + + C+ +Y ++TRL V P+ ASRSQ
Sbjct: 94 EDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQ 273
Query: 3040 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
A+RYL VRWG+ + N+ +I GE GD+D EE+L GLH+T+I++G
Sbjct: 274 AIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKG 402
>gb|AV931912.1|AV931912 AV931912 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd26l03 3', mRNA sequence
Length = 653
Score = 109 bits (232), Expect = 1e-022
Identities = 42/103 (40%), Positives = 66/103 (64%)
Frame = +1 / -1
Query: 2860 QDVASSNAHCVAFLIKDPQKVKTVDXXXXXXXXXXXXCHIMYCRNSTRLQVVPLLASRSQ 3039
+D S+ +C+AF + +P + + C+ +Y ++TRL V P+ ASRSQ
Sbjct: 512 EDSEHSSTYCLAFKVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVTPIHASRSQ 333
Query: 3040 ALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHKTVIVRG 3168
A+RYL VRWG+ + N+ +I GE GD+D EE+L GLH+T+I++G
Sbjct: 332 AIRYLFVRWGIELPNIVVIVGESGDSDYEELLGGLHRTIILKG 204
>emb|AJ238715.1|HVU238715 Hordeum vulgare partial complement codded sucrose-phosphate synthase
1 (235 bp)
Length = 235
Score = 67.5 bits (141), Expect(2) = 3e-022
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1 / -1
Query: 1504 EGASPKSMPPIWAEVMRFLTNPHKPMILALSRPDPKKNI 1620
E +S PP+WA++MR +NP KPMILAL+RPDPKKNI
Sbjct: 118 EVSSDSPDPPVWADIMRXFSNPRKPMILALARPDPKKNI 2
Score = 59.7 bits (124), Expect(2) = 3e-022
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +1 / -1
Query: 1369 RRGVSCHGRYMPRMVVIPPGMDFSNVVVHE 1458
RRGVSC+GR MPRM+ IPPGM+FS++V H+
Sbjct: 235 RRGVSCYGREMPRMIPIPPGMEFSHIVPHD 146
>gb|CA011510.1|CA011510 HT05E02u HT Hordeum vulgare subsp. vulgare cDNA clone HT05E02
3-PRIME, mRNA sequence
Length = 493
Score = 104 bits (222), Expect = 3e-021
Identities = 37/66 (56%), Positives = 53/66 (80%)
Frame = +1 / -1
Query: 2971 CHIMYCRNSTRLQVVPLLASRSQALRYLSVRWGVSVGNMYLITGEHGDTDLEEMLSGLHK 3150
CH +Y ++TRL V+P+ ASRSQALRYLSVRWG+ + N+ ++ GE GD+D EE+ GLHK
Sbjct: 454 CHALYNHSATRLSVIPIHASRSQALRYLSVRWGIELRNVVILVGESGDSDYEELFGGLHK 275
Query: 3151 TVIVRG 3168
T++++G
Sbjct: 274 TIVLKG 257
>gb|BM442254.2|BM442254 EBan01_SQ002_K17_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ002_K17 5', mRNA sequence
Length = 127
Score = 103 bits (219), Expect = 8e-021
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +1 / +3
Query: 2083 LRNIHLYSWPEHCRTYLTRVAGCRLRNPRWLKDTPADAGAD 2205
LRNIHLYSWPEHCRTYL RVAG R+RNPRWLKDTPADAGAD
Sbjct: 3 LRNIHLYSWPEHCRTYLARVAGSRIRNPRWLKDTPADAGAD 125
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,811,116,028
Number of Sequences: 312970
Number of extensions: 36028081
Number of successful extensions: 315311
Number of sequences better than 1.0e-020: 64
length of database: 58,378,179
effective HSP length: 56
effective length of database: 40,851,859
effective search space used: 45713230221
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)